View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14913_high_7 (Length: 429)
Name: NF14913_high_7
Description: NF14913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14913_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 343; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 34 - 415
Target Start/End: Complemental strand, 31062691 - 31062312
Alignment:
| Q |
34 |
attttgatatttggtccagatgtgttgtcctgatgactagatgtttggtattctttgggagcatcatgatcgtcttcataagtgttctgaacgatttctc |
133 |
Q |
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| T |
31062691 |
attttgatgtttggtccagatgttttgtcctgatgactagatgtttggtattctttgggagcatcatgaccgtcttcataagtgttctgaacgatttctc |
31062592 |
T |
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| Q |
134 |
cttcaaaatatcattctaattttgattaaattgatcgtcttctgaaggatttctccttaaaaaattgcttgatttttcatcctcaagtgttaccttgaaa |
233 |
Q |
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| T |
31062591 |
cttcaaaatatcattctaattttgattaaattgatcgtcttctgaaggatttctccttaaaaaattgcttgatttttcatcttcaagtgttaccttgaaa |
31062492 |
T |
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| Q |
234 |
tatttgaataatttgctttgaattcttagctagctgcatctatcatgtgacacataatgatatagtttagattcaatggtttcttgttcatgagatatgg |
333 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
31062491 |
tatttgaaaaatttgctttgaattcttagctagctgcatctatcatgtgacgcataatgatatagtttagattcaatggtttcttgttcatgag--atgg |
31062394 |
T |
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| Q |
334 |
tatatctataatgagtatgtttgtgcaactctctcaagacttccaacttttggttttaaggagtgaaagttgtgaagaattt |
415 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31062393 |
tatatctataatgagtatgtttgtgccactctctcaagacttccaacttttggttttaaggagtgaaagttgtgaagaattt |
31062312 |
T |
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