View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14913_low_24 (Length: 256)
Name: NF14913_low_24
Description: NF14913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14913_low_24 |
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Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 8517533 - 8517305
Alignment:
| Q |
16 |
gcatagatgaaactttacatgacaacgatttacaagacagaatcgtttggttggtaatgagagaggagatgtgttgattggtttaaccataaaccttttt |
115 |
Q |
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| T |
8517533 |
gcatagatgaaactttacatgacaacgatttacaagacagaatcgtttggttggtaatgagagaggagatgtgttgattggtttaaccataaaccttttt |
8517434 |
T |
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| Q |
116 |
actgcttatgcgaccattggtgcctgccttgttttgtctctatagaagaatttaggagacaagagtaacatggcttcacatgtttatcaattcatagggt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8517433 |
actgcttatgcgaccattggtgcctgccttgttttgtctctatagaagaatttaggagacaagagtaacatggcttcacatgtttatcaattcatagggt |
8517334 |
T |
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| Q |
216 |
ccccttgtcatgtttagactccaacccct |
244 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
8517333 |
ccccttgtcatgtttagactccaacccct |
8517305 |
T |
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