View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14914_high_9 (Length: 275)
Name: NF14914_high_9
Description: NF14914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14914_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 28622706 - 28622443
Alignment:
| Q |
1 |
tcctcaattcccctattcttctcgcttttccaccactccatcttatctccgtttccgcattccatgctccaacaaaaccaccggcaaatcaacagaatcc |
100 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28622706 |
tcctcaattcccctattcttctcgcttttccatcactccatcttatctccatttccgcattccatgctccaacaaaaccaccggcaaatcaacagaatcc |
28622607 |
T |
|
| Q |
101 |
accgatctcgagttggtagattgcgttggaacaggacaagatgtggagtgtctcctaaccgaagaagacgaaggaaaaacaaaagatgaatcatcatcga |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28622606 |
accgatctcgagttggtagattgcgtcggaacaggacaagatgtggagtgtctcctaaccgaagaagacgaaggaaaaacaaaagatgaatcatcatcga |
28622507 |
T |
|
| Q |
201 |
agagactgtgccttggggaagcgttatgggaaggtgcagtgttaatatcaccgttctttttctg |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28622506 |
agagactgtgccttggggaagcgttatgggaaggtgcagtgttaatatcaccgttctttttctg |
28622443 |
T |
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