View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14915_high_26 (Length: 323)
Name: NF14915_high_26
Description: NF14915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14915_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 313
Target Start/End: Complemental strand, 13137426 - 13137114
Alignment:
| Q |
1 |
ttccctttttatcggttcatttctttcgatttcagagtacagtcgtcatgggtctgaatatgtgactatggtgaatcaagaaccacataggtgtagaaga |
100 |
Q |
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| T |
13137426 |
ttccctttttatcggttcatttctttcgatttcagagtacagtcgtcgtgggtctgattatgtgactatggtggatcaagaaccacataggtgtagaaga |
13137327 |
T |
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| Q |
101 |
actgacggaaagaaatggaggtgcggtaaggacacagtacctaatcagaagtattgtgaacgtcacatgcacagaggtcgaaatcgttcaagaaagcttg |
200 |
Q |
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| T |
13137326 |
actgacggaaagaaatggaggtgcggcaaggacacagtacctaatcagaagtattgtgaacgtcacatgcacagaggtcgaaatcgttcaagaaagcttg |
13137227 |
T |
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| Q |
201 |
tggaaacatctcaacttaactctcctttgnnnnnnnntcctagtggtggcggcaagtcacatgcaaaactagtcccaaacattaaatcttcagtttcaaa |
300 |
Q |
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| T |
13137226 |
tggaaacatctcaacttaactctcctttgaaaacaaatcctagtggtggtggcaagtcacatgcaaaactagtcccaaacattaaatcttcagtttcaaa |
13137127 |
T |
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| Q |
301 |
tccaaaccctttg |
313 |
Q |
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| T |
13137126 |
tccaaaccctttg |
13137114 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 7246604 - 7246548
Alignment:
| Q |
149 |
aagtattgtgaacgtcacatgcacagaggtcgaaatcgttcaagaaagcttgtggaa |
205 |
Q |
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||||| |||||| | ||||||||||||||| |||| ||||||||||||| ||||||| |
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| T |
7246604 |
aagtactgtgaaagacacatgcacagaggtagaaaccgttcaagaaagcctgtggaa |
7246548 |
T |
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