View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14915_high_32 (Length: 269)
Name: NF14915_high_32
Description: NF14915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14915_high_32 |
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Alignment Details
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 9 - 251
Target Start/End: Original strand, 14244415 - 14244657
Alignment:
| Q |
9 |
gagaagaattgagttttcactaaaatctgcctaccatcttctgagtaatgactaatgacaaaggtgtcccaactcccagaatattcatctccctctctcg |
108 |
Q |
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| T |
14244415 |
gagaagaattgagttttcactaaaatctgcctaccatcttctgagtaatgactaatgacaaaggtgtcccaactcccagaatattcatctccctctctcg |
14244514 |
T |
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| Q |
109 |
gtaatatttggaagaagatttggtgtattcacttacctagagttagaaatttcgtttggagactggcnnnnnnnntcattccaacgagaggaaacttgtg |
208 |
Q |
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| T |
14244515 |
gtaatatttggaagaagatttggtctattcacttacctagagttagaaatttcatttggagattggcaaaaaaaatcattccaacgagaggaaacttgtg |
14244614 |
T |
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| Q |
209 |
taggagggttgtagcacttgacacaatcttccctctttgcttc |
251 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||| |
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| T |
14244615 |
taggagggatgtagcacttgacacaatcttccctctttgcttc |
14244657 |
T |
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