View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14915_low_30 (Length: 278)
Name: NF14915_low_30
Description: NF14915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14915_low_30 |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 39246317 - 39246057
Alignment:
| Q |
1 |
gttatttagatttggtttcatatattccttatttattttagcttctcttcgtgtaaacctcatttttaagtttggtatctcagcatgaccccaccatttt |
100 |
Q |
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| T |
39246317 |
gttatttacatttggtttcatatattccttatttatttttacttctcttcgtgtaaaccccatttttaagtttggtatctcagcatgaccccaccatttt |
39246218 |
T |
|
| Q |
101 |
gcatgaagagccaacaataaagggtgaacaagcaaatgcatataaaacacgttcattccctgtgaatttttgaaaagcaaaccttgtcatggaaaataac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||| |
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| T |
39246217 |
gcatgaagagccaacaataaagggtgaacaagcaaatgcatataaaacacgttcattccctgtgaaattttgaaaagcaaaacctgtcatggaaaataac |
39246118 |
T |
|
| Q |
201 |
tttgtctaccattaaaattttcatggtcccatccaaagtatatgtctgacccagagcattg |
261 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
39246117 |
tttgtctaccattaaaattttcatggtcccatccaaagtatatgtctgatccagagcattg |
39246057 |
T |
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