View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14916_low_18 (Length: 286)
Name: NF14916_low_18
Description: NF14916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14916_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 17 - 281
Target Start/End: Original strand, 37717942 - 37718206
Alignment:
| Q |
17 |
agtaaccatgatcatcatccataagcactaggtttccagaatccaagagcttcactaccctggttcttgatgaggacgcttctaagtttgtggaccagta |
116 |
Q |
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| T |
37717942 |
agtaaccatgatcatcatccataagcactaggtttccagaatccaagagcttcactaccctttttcttgacgaggacgcttctaagtttgtggaccagta |
37718041 |
T |
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| Q |
117 |
actttgtgatgcatctgctactaccatatttccatcctttgcgatttgaaaaactcctttagaatctacaatagggttgtttctgttggctacccaaacc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37718042 |
actttgtgatgcatctgctactaccatatttccatcctttgcgatttgaaaaactcctttagaatctacaatagggttgtttctgttggctacccaaacc |
37718141 |
T |
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| Q |
217 |
actgtttgtggttccagatcgtgataccatattcccaagtattttttaagattctctgtgctgct |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |
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| T |
37718142 |
actgtttgtggttccagatcgtgataccatattcccaagtattttttaagattctcggtgttgct |
37718206 |
T |
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