View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14917_high_19 (Length: 308)
Name: NF14917_high_19
Description: NF14917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14917_high_19 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 57 - 292
Target Start/End: Original strand, 48702114 - 48702349
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagtcatgcccca |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
48702114 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagccatgcccca |
48702213 |
T |
 |
| Q |
157 |
accaattgcatttatggcagcgtgtgaattttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtga |
256 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48702214 |
accaattgcatttatggcagcgtgtggattttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtga |
48702313 |
T |
 |
| Q |
257 |
taacagttcaacaaaagtggctttaccactttcctg |
292 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |
|
|
| T |
48702314 |
taacacttcaacaaaagtggctttaccactttcctg |
48702349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 57 - 292
Target Start/End: Original strand, 48697425 - 48697660
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagtcatgcccca |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
48697425 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatgagtagaataatgcaagggacatgctatttatactagtgaaagagccatgcccca |
48697524 |
T |
 |
| Q |
157 |
accaattgcatttatggcagcgtgtgaattttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtga |
256 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697525 |
accaattgcatttatggcagcatgtgaattttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtga |
48697624 |
T |
 |
| Q |
257 |
taacagttcaacaaaagtggctttaccactttcctg |
292 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |
|
|
| T |
48697625 |
taacacttcaacaaaagtggctttaccactttcctg |
48697660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 73 - 292
Target Start/End: Original strand, 30945803 - 30946022
Alignment:
| Q |
73 |
ttgttcttgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatg |
172 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
30945803 |
ttgttctggtgttgttactaatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttatg |
30945902 |
T |
 |
| Q |
173 |
gcagcgtgtgaattttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacagttcaacaaaa |
272 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
30945903 |
gcagcatgtgaattttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacacttcaacaaaa |
30946002 |
T |
 |
| Q |
273 |
gtggctttaccactttcctg |
292 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
30946003 |
gtggctttaccactttcctg |
30946022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 81 - 292
Target Start/End: Original strand, 30950517 - 30950728
Alignment:
| Q |
81 |
gtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatggcagcgtg |
180 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
30950517 |
gtgttgttactaatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttatggcagcgtg |
30950616 |
T |
 |
| Q |
181 |
tgaattttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacagttcaacaaaagtggcttt |
280 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
30950617 |
tgaattttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacacttcaacaaaagtggcttt |
30950716 |
T |
 |
| Q |
281 |
accactttcctg |
292 |
Q |
| |
|
|||||||||||| |
|
|
| T |
30950717 |
accactttcctg |
30950728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 24520318 - 24520363
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24520318 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
24520363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 42265927 - 42265883
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggat |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42265927 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggat |
42265883 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 42270646 - 42270602
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggat |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270646 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggat |
42270602 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 57 - 291
Target Start/End: Original strand, 5198948 - 5199182
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagtcatgcccca |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5198948 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagccatgcccca |
5199047 |
T |
 |
| Q |
157 |
accaattgcatttatggcagcgtgtgaattttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtga |
256 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5199048 |
accaattgcatttatggcagcgtgtggattttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtga |
5199147 |
T |
 |
| Q |
257 |
taacagttcaacaaaagtggctttaccactttcct |
291 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |
|
|
| T |
5199148 |
taacacttcaacaaaagtggctttaccactttcct |
5199182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 34614229 - 34614301
Alignment:
| Q |
211 |
atgtgaacatagaaattacatgccaacatgttttactgccatgtgataacagttcaacaaaa-gtggctttac |
282 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||| |
|
|
| T |
34614229 |
atgtaaacatagaaattacatgctaacatgttttactgccatgtgacaacaattcaacaaaaggtggctttac |
34614301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 28715747 - 28715678
Alignment:
| Q |
105 |
tagaatggtgcaagggacatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatggca |
175 |
Q |
| |
|
|||||||||||||| | ||||||||||||| ||||||||| ||||||||||||| || ||||||||||| |
|
|
| T |
28715747 |
tagaatggtgcaagag-catgctatttataggagtgaaagaaccatgccccaaccatttacatttatggca |
28715678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 73 - 292
Target Start/End: Original strand, 27879036 - 27879255
Alignment:
| Q |
73 |
ttgttcttgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatg |
172 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
27879036 |
ttgttctggtgttgttactaatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttatg |
27879135 |
T |
 |
| Q |
173 |
gcagcgtgtgaattttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacagttcaacaaaa |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
27879136 |
gcagcgtgtgaattttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgataacacttcaacaaaa |
27879235 |
T |
 |
| Q |
273 |
gtggctttaccactttcctg |
292 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
27879236 |
gtggctttaccactttcctg |
27879255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 26976424 - 26976470
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976424 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
26976470 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 1234725 - 1234680
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1234725 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
1234680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 27874283 - 27874327
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggat |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874283 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggat |
27874327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 30986478 - 30986430
Alignment:
| Q |
122 |
catgctatttatactagtgaaagagtcatgccccaaccaattgcattta |
170 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||| |||||| |
|
|
| T |
30986478 |
catgctatttatattagtgaaagagccatgccccaaccaattacattta |
30986430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 30966605 - 30966566
Alignment:
| Q |
122 |
catgctatttatactagtgaaagagtcatgccccaaccaa |
161 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30966605 |
catgctatttatactagtgaaagagccatgccccaaccaa |
30966566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 58 - 281
Target Start/End: Original strand, 2817545 - 2817768
Alignment:
| Q |
58 |
ctaaacaagctttacttgttcttgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagtcatgccccaa |
157 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
2817545 |
ctaaacaagttttacttgttcttgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatgtatactagtgaaagagccatgccccaa |
2817644 |
T |
 |
| Q |
158 |
ccaattgcatttatggcagcgtgtgaattttcaactttgcatagtaactttccatgtgaacatagaaattacatgccaacatgttttactgccatgtgat |
257 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
2817645 |
ccaattgcatttatggcagcgtgtgaattttcaactttgcatagtaacttcccatgtgaacatagaaattacatgccaacatattttactgccatgtgat |
2817744 |
T |
 |
| Q |
258 |
aacagttcaacaaaagtggcttta |
281 |
Q |
| |
|
|||| ||||||||||||||||||| |
|
|
| T |
2817745 |
aacaattcaacaaaagtggcttta |
2817768 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 5818806 - 5818852
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5818806 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
5818852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 5823568 - 5823613
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823568 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
5823613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 141; Significance: 6e-74; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 136 - 292
Target Start/End: Original strand, 29585662 - 29585818
Alignment:
| Q |
136 |
tagtgaaagagtcatgccccaaccaattgcatttatggcagcgtgtgaattttcaactttgcatagtaactttccatgtgaacatagaaattacatgcca |
235 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
29585662 |
tagtgaaagagccatgccccaaccaattgcatttatggcagcgtgtgaattttcaactttgcatagtaactttccatgtgaacataaaaactacatgcca |
29585761 |
T |
 |
| Q |
236 |
acatgttttactgccatgtgataacagttcaacaaaagtggctttaccactttcctg |
292 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
29585762 |
acatgttttactgccatgtgataacaattcaacaaaagtggctttaccactttcctg |
29585818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 41718434 - 41718357
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttata |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718434 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttata |
41718357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 41723160 - 41723083
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttata |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723160 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttata |
41723083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 34352272 - 34352226
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352272 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
34352226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 34359980 - 34359934
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34359980 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
34359934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 29585589 - 29585640
Alignment:
| Q |
52 |
actactctaaacaagctttacttgttcttgtgttgttactgatttgggatga |
103 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29585589 |
actactctagacaagctttacttgttgttgtgttgttactgatttgggatga |
29585640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 30234974 - 30234920
Alignment:
| Q |
121 |
acatgctatttatactagtgaaagagtcatgccccaaccaattgcatttatggca |
175 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
30234974 |
acatgctatttatactagtgaaagagccatgccccaaccaattacatttatggca |
30234920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 9439665 - 9439710
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439665 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
9439710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 9444385 - 9444430
Alignment:
| Q |
57 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444385 |
tctaaacaagctttacttgttcttgtgttgttactgatttgggatg |
9444430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University