View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14917_high_28 (Length: 253)

Name: NF14917_high_28
Description: NF14917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14917_high_28
NF14917_high_28
[»] chr1 (6 HSPs)
chr1 (14-144)||(36692832-36692962)
chr1 (14-144)||(36708933-36709063)
chr1 (170-234)||(43740403-43740467)
chr1 (160-250)||(30339665-30339755)
chr1 (160-248)||(20186823-20186911)
chr1 (160-250)||(51787301-51787391)
[»] chr5 (5 HSPs)
chr5 (160-250)||(25955940-25956030)
chr5 (161-250)||(42250146-42250235)
chr5 (170-250)||(38280253-38280333)
chr5 (161-250)||(1501349-1501438)
chr5 (161-250)||(7886385-7886474)
[»] chr7 (10 HSPs)
chr7 (160-250)||(2286487-2286577)
chr7 (161-250)||(25185913-25186002)
chr7 (160-250)||(7527244-7527334)
chr7 (184-250)||(23844688-23844754)
chr7 (160-250)||(496712-496802)
chr7 (160-250)||(11765736-11765826)
chr7 (168-250)||(48057679-48057761)
chr7 (162-250)||(40855131-40855220)
chr7 (161-250)||(42535194-42535283)
chr7 (170-249)||(31427241-31427320)
[»] chr3 (6 HSPs)
chr3 (160-250)||(47940855-47940945)
chr3 (171-250)||(8153019-8153098)
chr3 (160-250)||(49786422-49786512)
chr3 (160-250)||(8436876-8436966)
chr3 (167-232)||(48778971-48779036)
chr3 (160-231)||(29836769-29836839)
[»] chr4 (3 HSPs)
chr4 (160-250)||(52055128-52055218)
chr4 (170-250)||(1158235-1158315)
chr4 (170-231)||(49866689-49866750)
[»] chr8 (2 HSPs)
chr8 (160-250)||(4076924-4077014)
chr8 (172-247)||(3780342-3780417)
[»] chr6 (1 HSPs)
chr6 (160-250)||(33594499-33594589)
[»] chr2 (2 HSPs)
chr2 (160-250)||(13922214-13922304)
chr2 (160-250)||(11828986-11829076)


Alignment Details
Target: chr1 (Bit Score: 99; Significance: 6e-49; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 36692832 - 36692962
Alignment:
Q  14 ctacttaacaatcaattccattccacgcattgggattaattatccttaatttgttgatgtatactactatcatacgcattcattaagaaaatattttgtg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  36692832 ctacttaacaatcaattccattccacgcattgggattaattattcttaatttgttgatgtatactactattctacgcattcattaagaaaatattttgtg 36692931  T
Q  114 cacatctctcgagggtatatacactttaaaa 144  Q
    ||||| ||| |||||| |||| | |||||||    
T  36692932 cacatatcttgagggtgtatatattttaaaa 36692962  T

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Target: chr1; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 36708933 - 36709063
Alignment:
Q  14 ctacttaacaatcaattccattccacgcattgggattaattatccttaatttgttgatgtatactactatcatacgcattcattaagaaaatattttgtg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  36708933 ctacttaacaatcaattccattccacgcattgggattaattattcttaatttgttgatgtatactactattctacgcattcattaagaaaatattttgtg 36709032  T
Q  114 cacatctctcgagggtatatacactttaaaa 144  Q
    ||||| ||| |||||| |||| | |||||||    
T  36709033 cacatatcttgagggtgtatatattttaaaa 36709063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 43740467 - 43740403
Alignment:
Q  170 ttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctt 234  Q
    ||||||||||| |||||||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  43740467 ttaaacctccacacaaacatgtgatatgtggcctaaacctcacaaacactttgtctctcttcctt 43740403  T

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Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 30339665 - 30339755
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||| ||||||||| | | |||||||||||| ||| |||||||||||||||||||||||||||||||  ||| || ||||||||||    
T  30339665 gcatacacacttaaacctctacataaacatgtgacacgtgtcctagaccccacaaacactttgtctctcttctctttcatccatctctctc 30339755  T

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Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 20186911 - 20186823
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctc 248  Q
    ||||| ||| ||||||||||| | |||||||||||| ||| |||||| ||||||||||||||||||||||||  ||| || ||||||||    
T  20186911 gcatacacacttaaacctccacataaacatgtgacacgtgtcctagatcccacaaacactttgtctctcttctctttcatccatctctc 20186823  T

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Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 51787301 - 51787391
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||| |||||||| || | |||||||||||| |||  ||||||||||||||||||||||||||||||  ||| || ||||||||||    
T  51787301 gcatacacacttaaaccttcacataaacatgtgacacgtgctctagaccccacaaacactttgtctctcttctctttcatgcatctctctc 51787391  T

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Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 25956030 - 25955940
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  25956030 gcatacacatttaaacctccacacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttccttttcatccatctctctc 25955940  T

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Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 42250146 - 42250235
Alignment:
Q  161 catatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    |||| ||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||    
T  42250146 catagacacttaaacctccacacaaacatgtgacatgtggcttagaccccacaaacactttgtctctcttccttttcatccatctctctc 42250235  T

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Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 38280333 - 38280253
Alignment:
Q  170 ttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||  ||| || ||||||||||    
T  38280333 ttaaacctccacataaacatgtgacacgtgtcctagaccccacaaacactttgtctctcttctctttcatccatctctctc 38280253  T

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Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 1501438 - 1501349
Alignment:
Q  161 catatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    |||| ||| ||||||||||| | |||||| |||||||| |||||||||||| | |||||||||||||||||  ||| || ||||||||||    
T  1501438 catacacacttaaacctccacataaacatatgacatgtagcctagaccccatatacactttgtctctcttctctttcatccatctctctc 1501349  T

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Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 7886385 - 7886474
Alignment:
Q  161 catatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||| | |||||| | | |||||||||||||| ||| ||  |||||||||    
T  7886385 catacacacttaaacctccacacaaacatgtgacatgtggcctaaatcccacatatattttgtctctcttccctttcatatatctctctc 7886474  T

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Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 2286487 - 2286577
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  2286487 gcatacacacttaaacctccacacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttccttttcatccatctctctc 2286577  T

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Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 25186002 - 25185913
Alignment:
Q  161 catatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||||    
T  25186002 catacacacttaaacctccacacaaacatgtgacatgtggcctagaccccacaaatactttatctctcttccttttcatccatctctctc 25185913  T

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Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 7527334 - 7527244
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||  |||| || ||||||||||    
T  7527334 gcatacacacttaaacctccacacaaacatgtgacatgtggcctagactccataaacactttgtctcttttttttttcatccatctctctc 7527244  T

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Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 23844688 - 23844754
Alignment:
Q  184 aaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||| || ||||||||||    
T  23844688 aaacatgtgacatgtgccctagacctcacaaacactttgtctctcttccttttcatccatctctctc 23844754  T

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Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 496712 - 496802
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||| ||||||||||| | |||||| ||||| ||| |||||||||||||||||||||||||||||||  ||| || ||||||||||    
T  496712 gcatacacacttaaacctccacataaacatatgacacgtgtcctagaccccacaaacactttgtctctcttctctttcatccatctctctc 496802  T

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Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 11765736 - 11765826
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||| ||||||||||| | |||||||||||| ||| ||| |||||||||||||||||||||||||||  ||| || ||||||||||    
T  11765736 gcatacacacttaaacctccacataaacatgtgacacgtgtccttgaccccacaaacactttgtctctcttctctttcatccatctctctc 11765826  T

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Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 250
Target Start/End: Complemental strand, 48057761 - 48057679
Alignment:
Q  168 atttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    |||||||| |||| | |||||||||||| ||| |||||||||||||||||||||||||||||||  ||| || ||||||||||    
T  48057761 atttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttgtctctcttctctttcatccatctctctc 48057679  T

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Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 40855220 - 40855131
Alignment:
Q  162 atatacatttaaacctccagacaaacatgtgacatgtggc-ctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||||| ||||||||| | ||||||||||||| |||||  ||||||| |||||||||||||||||| |||| ||| |||||||||||||    
T  40855220 atatacacttaaacctctacacaaacatgtgacctgtgggtctagacctcacaaacactttgtctcttttccctttcattcatctctctc 40855131  T

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Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 42535283 - 42535194
Alignment:
Q  161 catatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    |||| ||| ||||||||||| | |||||||||||| ||| | || | ||||||||||||||||||||||||  ||| || ||||||||||    
T  42535283 catacacacttaaacctccacataaacatgtgacacgtgtcttatatcccacaaacactttgtctctcttctctttcatccatctctctc 42535194  T

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Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 31427320 - 31427241
Alignment:
Q  170 ttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctct 249  Q
    ||||||||||  | ||| |||||||||||||  ||||| |||||||||||||||||||||||| | | || |||||||||    
T  31427320 ttaaacctccgcataaatatgtgacatgtggtttagactccacaaacactttgtctctcttccctctcatccatctctct 31427241  T

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Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 47940855 - 47940945
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  47940855 gcatacacacttaaacctccacacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttccttttcatccatctctctc 47940945  T

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Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 8153019 - 8153098
Alignment:
Q  171 taaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    |||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||  |||||| ||||||||||    
T  8153019 taaacctccacataaacatgtgacatgtggcctagactccacaaacactttgtctctcttctcttttatccatctctctc 8153098  T

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Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 49786422 - 49786512
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||| ||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  49786422 gcatacacacttaaacctccacataaacatgtgacacgtgtcctagaccccacaaacactttgtctctcttctctttcattcatctctctc 49786512  T

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Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 8436966 - 8436876
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||||||||||||| | | ||| || ||||| ||| | |||||||||||||||||||||||||||||  ||| || ||||||||||    
T  8436966 gcatacacatttaaacctctacataaatatatgacacgtgtcttagaccccacaaacactttgtctctcttctctttcatccatctctctc 8436876  T

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Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 48779036 - 48778971
Alignment:
Q  167 catttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcc 232  Q
    ||||||||| |||| | ||| ||||||||||||| |||||| ||| ||||||||| ||||||||||    
T  48779036 catttaaacatccacataaatatgtgacatgtggtctagactccataaacactttatctctcttcc 48778971  T

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Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 29836839 - 29836769
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttc 231  Q
    ||||| ||| ||||||||||| ||||| |||| |||| || |||| |||||||||| |||||||||||||||    
T  29836839 gcatacacacttaaacctccacacaaatatgtaacatatgacctacaccccacaaa-actttgtctctcttc 29836769  T

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Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 52055218 - 52055128
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  52055218 gcatacacacttaaacctctacacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttccttttcatccatctctctc 52055128  T

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Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 1158315 - 1158235
Alignment:
Q  170 ttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| |||||||||||||    
T  1158315 ttaaacctccacacaaacatgtgacatgtggcctagaccctacaaacattttgtctctcttccctttcattcatctctctc 1158235  T

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Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 49866689 - 49866750
Alignment:
Q  170 ttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttc 231  Q
    |||||||| || ||||| |||||||||||| | |||||| || |||||||||||||||||||    
T  49866689 ttaaaccttcacacaaatatgtgacatgtgacttagaccacataaacactttgtctctcttc 49866750  T

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Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 4077014 - 4076924
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||| ||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||| || ||||||||||    
T  4077014 gcatacacacttaaacctccacacaaacatgtgacatgtagcctagaccccacaaacaatttgtctctcttccttttcatccatctctctc 4076924  T

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Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 3780417 - 3780342
Alignment:
Q  172 aaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctct 247  Q
    ||||||||| ||||||||||||||||| ||||| |||| | |||||||||||||||||||| ||| || |||||||    
T  3780417 aaacctccacacaaacatgtgacatgtagcctaaacccgagaaacactttgtctctcttccctttcatccatctct 3780342  T

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Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 33594589 - 33594499
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||| |||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||    
T  33594589 gcatacacacttaaaccttcacacaaacatgtgacatgtggcctagaccccacaaatactttgtctctcttccttttcatccatctctctc 33594499  T

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Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 13922214 - 13922304
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||| |||||||||||   |||||||||||| ||| |||||||||||||||||||||||||||||||  ||| || ||||||||||    
T  13922214 gcatacacacttaaacctccacgtaaacatgtgacacgtgtcctagaccccacaaacactttgtctctcttctctttcatccatctctctc 13922304  T

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Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 11828986 - 11829076
Alignment:
Q  160 gcatatacatttaaacctccagacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttcctttttattcatctctctc 250  Q
    ||||| ||| ||||||||||| | ||| |||||||||||| |||||||||||||||||||||| |||||| |  ||| || ||||||||||    
T  11828986 gcatacacacttaaacctccacataaatatgtgacatgtgtcctagaccccacaaacactttgcctctctcctctttcatccatctctctc 11829076  T

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