View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14917_high_29 (Length: 248)

Name: NF14917_high_29
Description: NF14917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14917_high_29
NF14917_high_29
[»] chr2 (55 HSPs)
chr2 (17-248)||(44487588-44487818)
chr2 (180-240)||(5807750-5807810)
chr2 (184-248)||(33124352-33124416)
chr2 (176-243)||(1244618-1244685)
chr2 (173-244)||(12206546-12206617)
chr2 (194-248)||(6952316-6952370)
chr2 (175-248)||(8234772-8234843)
chr2 (173-239)||(38581582-38581648)
chr2 (173-248)||(580761-580834)
chr2 (173-248)||(17154693-17154766)
chr2 (173-248)||(34018048-34018121)
chr2 (174-240)||(17115523-17115587)
chr2 (188-247)||(35694771-35694830)
chr2 (190-240)||(2057531-2057581)
chr2 (175-248)||(3037602-3037673)
chr2 (173-243)||(26975275-26975344)
chr2 (173-248)||(7086297-7086370)
chr2 (173-244)||(11133124-11133193)
chr2 (174-248)||(20122454-20122526)
chr2 (174-248)||(33001532-33001604)
chr2 (173-248)||(34830630-34830705)
chr2 (173-248)||(39334857-39334932)
chr2 (189-246)||(279791-279847)
chr2 (176-244)||(11837037-11837103)
chr2 (174-239)||(19064869-19064934)
chr2 (207-248)||(22297462-22297503)
chr2 (173-244)||(19905633-19905702)
chr2 (173-241)||(25463242-25463310)
chr2 (204-248)||(29035020-29035064)
chr2 (178-230)||(30737043-30737095)
chr2 (173-240)||(44422159-44422224)
chr2 (173-244)||(44721682-44721751)
chr2 (174-244)||(2114414-2114482)
chr2 (184-223)||(2971128-2971167)
chr2 (173-244)||(32256184-32256255)
chr2 (173-248)||(36413804-36413879)
chr2 (173-240)||(39118445-39118512)
chr2 (173-247)||(41195920-41195992)
chr2 (173-244)||(2304338-2304407)
chr2 (173-247)||(5029076-5029150)
chr2 (191-241)||(14307688-14307738)
chr2 (194-244)||(23405247-23405296)
chr2 (190-244)||(25406643-25406697)
chr2 (191-241)||(38242662-38242712)
chr2 (176-245)||(1778875-1778944)
chr2 (173-241)||(3179375-3179441)
chr2 (204-245)||(34034397-34034438)
chr2 (173-244)||(1836636-1836705)
chr2 (204-240)||(7889310-7889346)
chr2 (212-248)||(18424167-18424203)
chr2 (191-243)||(29713083-29713135)
chr2 (173-248)||(30474173-30474246)
chr2 (204-248)||(32527084-32527128)
chr2 (173-241)||(34107325-34107393)
chr2 (173-246)||(43870999-43871070)
[»] chr5 (58 HSPs)
chr5 (173-246)||(3535912-3535985)
chr5 (184-248)||(29561692-29561756)
chr5 (183-235)||(39684295-39684347)
chr5 (174-248)||(10943760-10943832)
chr5 (173-248)||(28537179-28537254)
chr5 (174-248)||(38618660-38618732)
chr5 (178-236)||(37986848-37986906)
chr5 (176-244)||(17137846-17137914)
chr5 (173-248)||(29096286-29096359)
chr5 (173-248)||(32158392-32158465)
chr5 (191-243)||(40384300-40384352)
chr5 (173-240)||(34010587-34010654)
chr5 (173-244)||(42260696-42260767)
chr5 (183-241)||(6291046-6291104)
chr5 (174-243)||(21017582-21017652)
chr5 (193-243)||(33599958-33600008)
chr5 (175-248)||(33800937-33801008)
chr5 (175-236)||(22687859-22687920)
chr5 (179-240)||(31556870-31556931)
chr5 (173-244)||(843346-843415)
chr5 (173-248)||(18478047-18478120)
chr5 (173-248)||(19058982-19059055)
chr5 (173-248)||(30403794-30403867)
chr5 (191-243)||(31004124-31004176)
chr5 (189-248)||(18101941-18102000)
chr5 (191-248)||(8015879-8015934)
chr5 (173-244)||(18872569-18872636)
chr5 (178-243)||(22396970-22397034)
chr5 (191-244)||(27006388-27006441)
chr5 (179-244)||(38128995-38129060)
chr5 (176-248)||(42455375-42455445)
chr5 (204-248)||(1463915-1463959)
chr5 (173-240)||(13754058-13754123)
chr5 (173-244)||(36226113-36226182)
chr5 (173-236)||(39760130-39760194)
chr5 (184-244)||(42553128-42553188)
chr5 (189-244)||(8934829-8934884)
chr5 (173-240)||(11736928-11736995)
chr5 (173-232)||(13862184-13862243)
chr5 (178-248)||(27219546-27219614)
chr5 (178-248)||(33729822-33729890)
chr5 (173-242)||(1244705-1244772)
chr5 (194-248)||(2058250-2058304)
chr5 (178-244)||(11246475-11246541)
chr5 (173-248)||(20735153-20735226)
chr5 (173-243)||(27095512-27095582)
chr5 (203-248)||(6447486-6447531)
chr5 (190-243)||(20220140-20220193)
chr5 (173-244)||(2029106-2029175)
chr5 (204-244)||(4674822-4674862)
chr5 (173-244)||(7234850-7234919)
chr5 (173-248)||(20945869-20945942)
chr5 (173-244)||(29331291-29331360)
chr5 (212-248)||(31250191-31250227)
chr5 (173-241)||(35813219-35813286)
chr5 (204-244)||(36045141-36045181)
chr5 (212-248)||(38503272-38503308)
chr5 (212-248)||(43227910-43227946)
[»] chr4 (74 HSPs)
chr4 (173-248)||(20610783-20610858)
chr4 (175-248)||(27921940-27922013)
chr4 (178-243)||(49039426-49039491)
chr4 (173-248)||(22478718-22478791)
chr4 (182-243)||(21023337-21023398)
chr4 (173-248)||(20753103-20753176)
chr4 (178-241)||(33359868-33359931)
chr4 (178-248)||(36257738-36257806)
chr4 (174-248)||(53697959-53698031)
chr4 (173-248)||(54854155-54854230)
chr4 (177-242)||(28221289-28221352)
chr4 (173-244)||(36954185-36954254)
chr4 (173-239)||(55967631-55967697)
chr4 (191-239)||(1589152-1589199)
chr4 (173-248)||(3442887-3442960)
chr4 (173-244)||(13073133-13073201)
chr4 (173-248)||(56546427-56546500)
chr4 (173-248)||(20166360-20166435)
chr4 (173-243)||(30295562-30295630)
chr4 (173-243)||(30324464-30324532)
chr4 (178-240)||(39293580-39293643)
chr4 (173-248)||(9693006-9693079)
chr4 (173-248)||(14149837-14149910)
chr4 (173-248)||(28520709-28520782)
chr4 (191-248)||(47017942-47017997)
chr4 (173-248)||(48968188-48968261)
chr4 (179-244)||(49319441-49319507)
chr4 (173-248)||(53354944-53355017)
chr4 (176-248)||(3465627-3465697)
chr4 (194-243)||(23226702-23226751)
chr4 (191-244)||(24039932-24039985)
chr4 (176-248)||(36008319-36008389)
chr4 (194-242)||(41346805-41346854)
chr4 (178-243)||(47416517-47416582)
chr4 (173-248)||(548865-548938)
chr4 (203-247)||(7768794-7768838)
chr4 (173-244)||(11084227-11084299)
chr4 (173-240)||(12856236-12856301)
chr4 (173-248)||(17859822-17859895)
chr4 (191-243)||(37997840-37997892)
chr4 (173-240)||(38433363-38433428)
chr4 (173-240)||(41003150-41003215)
chr4 (184-248)||(49743406-49743470)
chr4 (189-248)||(4419678-4419737)
chr4 (191-242)||(6202653-6202704)
chr4 (173-248)||(15853866-15853941)
chr4 (173-247)||(30203298-30203373)
chr4 (173-244)||(33076578-33076648)
chr4 (173-248)||(41492475-41492549)
chr4 (173-248)||(53468740-53468814)
chr4 (173-244)||(8690262-8690331)
chr4 (178-248)||(12585540-12585610)
chr4 (202-248)||(29785194-29785240)
chr4 (204-246)||(46799453-46799495)
chr4 (173-242)||(54304907-54304974)
chr4 (174-246)||(15021471-15021541)
chr4 (202-243)||(18497441-18497482)
chr4 (191-244)||(32048554-32048606)
chr4 (207-248)||(37274624-37274665)
chr4 (173-221)||(52743278-52743324)
chr4 (191-247)||(6481578-6481634)
chr4 (173-248)||(10098169-10098242)
chr4 (189-244)||(16323855-16323911)
chr4 (173-240)||(21476059-21476124)
chr4 (173-241)||(21664130-21664197)
chr4 (173-241)||(21672894-21672961)
chr4 (208-244)||(35909175-35909210)
chr4 (194-242)||(42758161-42758209)
chr4 (194-242)||(43049937-43049985)
chr4 (207-239)||(43115321-43115353)
chr4 (189-240)||(45350328-45350377)
chr4 (189-240)||(45359807-45359856)
chr4 (173-248)||(51536903-51536976)
chr4 (204-248)||(52330916-52330960)
[»] chr1 (83 HSPs)
chr1 (173-244)||(9768785-9768856)
chr1 (173-248)||(50199452-50199527)
chr1 (173-243)||(9769556-9769626)
chr1 (173-248)||(3341712-3341787)
chr1 (173-243)||(12553243-12553313)
chr1 (174-244)||(41677108-41677178)
chr1 (173-244)||(37733803-37733872)
chr1 (173-248)||(46116152-46116225)
chr1 (173-248)||(38028581-38028656)
chr1 (191-248)||(1721184-1721241)
chr1 (173-248)||(19793570-19793643)
chr1 (204-248)||(52833113-52833157)
chr1 (173-244)||(2643791-2643862)
chr1 (173-240)||(9931139-9931206)
chr1 (173-242)||(3532952-3533019)
chr1 (174-244)||(9976361-9976431)
chr1 (173-241)||(195095-195163)
chr1 (184-232)||(4511512-4511560)
chr1 (173-244)||(11405504-11405573)
chr1 (173-248)||(15368849-15368922)
chr1 (173-244)||(15774290-15774359)
chr1 (173-248)||(39994826-39994899)
chr1 (173-248)||(50859345-50859418)
chr1 (173-244)||(2903003-2903074)
chr1 (177-244)||(23750198-23750265)
chr1 (173-244)||(33844665-33844736)
chr1 (173-244)||(33949242-33949313)
chr1 (189-248)||(40679829-40679888)
chr1 (173-243)||(47939177-47939245)
chr1 (187-241)||(65885-65939)
chr1 (173-239)||(35424193-35424259)
chr1 (191-240)||(4288640-4288689)
chr1 (191-244)||(11238022-11238075)
chr1 (191-248)||(18003860-18003917)
chr1 (207-244)||(27745205-27745242)
chr1 (191-240)||(48260183-48260232)
chr1 (173-221)||(4605819-4605867)
chr1 (173-248)||(17056858-17056931)
chr1 (204-248)||(17350105-17350149)
chr1 (191-231)||(19866536-19866576)
chr1 (173-248)||(21884619-21884692)
chr1 (173-244)||(23930522-23930591)
chr1 (173-248)||(32711122-32711195)
chr1 (173-244)||(49251373-49251442)
chr1 (184-228)||(50147588-50147632)
chr1 (174-248)||(4354084-4354156)
chr1 (208-243)||(10629415-10629450)
chr1 (202-245)||(24168584-24168627)
chr1 (173-239)||(35593816-35593880)
chr1 (190-248)||(1576114-1576172)
chr1 (182-248)||(7906311-7906377)
chr1 (191-237)||(27654999-27655045)
chr1 (173-248)||(40678867-40678940)
chr1 (173-243)||(43020660-43020730)
chr1 (173-248)||(47763363-47763436)
chr1 (194-248)||(50575945-50575999)
chr1 (207-244)||(17889109-17889146)
chr1 (174-242)||(22346469-22346535)
chr1 (173-241)||(23758228-23758297)
chr1 (206-243)||(32635189-32635226)
chr1 (173-248)||(38019925-38019999)
chr1 (173-222)||(39928310-39928359)
chr1 (207-244)||(43837411-43837448)
chr1 (191-239)||(9007785-9007832)
chr1 (203-239)||(14776766-14776802)
chr1 (184-248)||(16182853-16182917)
chr1 (208-244)||(19424094-19424130)
chr1 (204-248)||(19976559-19976603)
chr1 (212-248)||(24134639-24134675)
chr1 (184-240)||(27985016-27985072)
chr1 (208-248)||(29332328-29332368)
chr1 (212-244)||(35619023-35619055)
chr1 (173-248)||(37490934-37491007)
chr1 (204-248)||(38021296-38021340)
chr1 (204-248)||(39238760-39238804)
chr1 (173-240)||(39433410-39433475)
chr1 (180-244)||(41182822-41182885)
chr1 (173-248)||(42831991-42832064)
chr1 (212-248)||(43109253-43109289)
chr1 (173-213)||(47645778-47645818)
chr1 (212-244)||(49916488-49916520)
chr1 (191-243)||(52765724-52765776)
chr1 (196-248)||(52961081-52961133)
[»] scaffold0002 (1 HSPs)
scaffold0002 (173-248)||(440443-440518)
[»] chr7 (53 HSPs)
chr7 (173-248)||(14102505-14102578)
chr7 (173-248)||(14412522-14412595)
chr7 (173-240)||(23470477-23470544)
chr7 (178-243)||(10958082-10958147)
chr7 (176-248)||(2567811-2567883)
chr7 (176-248)||(21285334-21285404)
chr7 (191-248)||(35195887-35195944)
chr7 (173-244)||(11808086-11808158)
chr7 (173-248)||(29658250-29658323)
chr7 (173-248)||(33202532-33202605)
chr7 (173-247)||(34948151-34948223)
chr7 (173-248)||(36315950-36316025)
chr7 (179-248)||(1649196-1649265)
chr7 (191-244)||(43635636-43635689)
chr7 (173-248)||(4169120-4169193)
chr7 (177-248)||(41012560-41012632)
chr7 (173-248)||(47355853-47355929)
chr7 (173-248)||(47552257-47552330)
chr7 (173-244)||(44409249-44409319)
chr7 (173-244)||(48007070-48007141)
chr7 (173-243)||(10020445-10020515)
chr7 (173-242)||(17997716-17997783)
chr7 (173-243)||(26734247-26734317)
chr7 (189-239)||(41000813-41000863)
chr7 (179-244)||(7162650-7162715)
chr7 (207-248)||(27047725-27047766)
chr7 (173-248)||(22965936-22966009)
chr7 (191-239)||(24579280-24579328)
chr7 (179-231)||(28555833-28555885)
chr7 (184-240)||(38328554-38328610)
chr7 (173-248)||(38451907-38451980)
chr7 (173-241)||(42976576-42976644)
chr7 (212-247)||(3961423-3961458)
chr7 (181-241)||(5773180-5773242)
chr7 (205-248)||(28914885-28914928)
chr7 (193-248)||(28968679-28968734)
chr7 (174-221)||(38363230-38363277)
chr7 (191-245)||(8725133-8725186)
chr7 (174-239)||(45198077-45198140)
chr7 (191-244)||(7732254-7732307)
chr7 (173-241)||(22706006-22706072)
chr7 (179-248)||(25711114-25711182)
chr7 (173-241)||(35368447-35368513)
chr7 (191-248)||(48175011-48175067)
chr7 (173-248)||(2261462-2261535)
chr7 (173-248)||(17900857-17900930)
chr7 (212-248)||(24030029-24030065)
chr7 (184-248)||(30431924-30431988)
chr7 (177-248)||(30644213-30644282)
chr7 (182-218)||(35457736-35457772)
chr7 (212-248)||(40273865-40273901)
chr7 (173-244)||(44843740-44843808)
chr7 (208-240)||(48258195-48258227)
[»] chr8 (61 HSPs)
chr8 (179-248)||(14011020-14011089)
chr8 (173-242)||(220338-220407)
chr8 (173-242)||(689493-689562)
chr8 (173-242)||(733961-734030)
chr8 (173-242)||(857857-857926)
chr8 (173-248)||(15042343-15042416)
chr8 (178-244)||(25470827-25470893)
chr8 (183-244)||(4604339-4604400)
chr8 (173-248)||(4798519-4798592)
chr8 (173-244)||(14683924-14683993)
chr8 (173-248)||(25689366-25689439)
chr8 (174-244)||(30542812-30542880)
chr8 (173-248)||(2696577-2696650)
chr8 (173-248)||(2800063-2800136)
chr8 (173-242)||(216123-216192)
chr8 (173-242)||(692683-692752)
chr8 (173-242)||(696892-696961)
chr8 (173-242)||(729746-729815)
chr8 (173-242)||(853641-853710)
chr8 (187-240)||(26773692-26773745)
chr8 (189-248)||(4954974-4955034)
chr8 (173-248)||(5245522-5245595)
chr8 (173-248)||(7649572-7649645)
chr8 (180-243)||(16808342-16808406)
chr8 (173-248)||(17987427-17987500)
chr8 (173-244)||(23239172-23239241)
chr8 (173-248)||(36359696-36359769)
chr8 (173-244)||(43468683-43468752)
chr8 (173-244)||(1028531-1028601)
chr8 (193-244)||(19925095-19925146)
chr8 (173-241)||(22426452-22426518)
chr8 (191-246)||(37523985-37524040)
chr8 (205-248)||(43508456-43508499)
chr8 (173-240)||(13106344-13106413)
chr8 (190-240)||(22438577-22438627)
chr8 (191-241)||(22847256-22847306)
chr8 (184-248)||(5184876-5184938)
chr8 (190-223)||(7345497-7345530)
chr8 (184-248)||(10199731-10199793)
chr8 (207-248)||(11823006-11823047)
chr8 (207-244)||(14010782-14010819)
chr8 (211-248)||(17855693-17855730)
chr8 (194-239)||(28979079-28979124)
chr8 (173-241)||(31373371-31373437)
chr8 (173-241)||(43874955-43875021)
chr8 (204-248)||(1588811-1588855)
chr8 (212-244)||(5904389-5904421)
chr8 (204-248)||(7314777-7314821)
chr8 (173-248)||(9525001-9525074)
chr8 (208-244)||(10201310-10201346)
chr8 (173-248)||(14684194-14684267)
chr8 (191-243)||(18123910-18123962)
chr8 (173-248)||(23857301-23857374)
chr8 (173-240)||(24074558-24074623)
chr8 (191-247)||(24572845-24572901)
chr8 (173-248)||(24608461-24608534)
chr8 (204-244)||(31129350-31129390)
chr8 (207-243)||(37219554-37219590)
chr8 (220-248)||(37708738-37708766)
chr8 (173-240)||(41125412-41125476)
chr8 (212-248)||(41454842-41454878)
[»] chr3 (65 HSPs)
chr3 (183-243)||(37707630-37707690)
chr3 (184-248)||(40956674-40956738)
chr3 (173-248)||(45713524-45713597)
chr3 (173-248)||(46328902-46328975)
chr3 (178-248)||(40160779-40160849)
chr3 (173-246)||(42832040-42832111)
chr3 (173-248)||(33206801-33206874)
chr3 (173-248)||(38176098-38176171)
chr3 (173-248)||(3993683-3993758)
chr3 (177-248)||(21248970-21249041)
chr3 (173-248)||(22432887-22432962)
chr3 (174-248)||(42270992-42271064)
chr3 (173-243)||(50724416-50724484)
chr3 (173-243)||(50788364-50788432)
chr3 (173-243)||(33533252-33533322)
chr3 (191-244)||(32080103-32080156)
chr3 (174-241)||(28206516-28206581)
chr3 (173-244)||(36331704-36331773)
chr3 (184-244)||(36842210-36842270)
chr3 (173-244)||(54983683-54983752)
chr3 (174-248)||(3955352-3955424)
chr3 (173-236)||(4009994-4010057)
chr3 (190-241)||(17262270-17262321)
chr3 (191-248)||(24537871-24537926)
chr3 (173-248)||(27183659-27183732)
chr3 (189-242)||(28951916-28951969)
chr3 (173-241)||(30157053-30157119)
chr3 (204-248)||(9625027-9625071)
chr3 (204-248)||(10959177-10959221)
chr3 (173-240)||(14417920-14417985)
chr3 (189-241)||(23025948-23026000)
chr3 (173-244)||(43566774-43566843)
chr3 (173-244)||(43774233-43774302)
chr3 (184-236)||(47497134-47497186)
chr3 (173-248)||(49639072-49639145)
chr3 (173-248)||(793985-794059)
chr3 (190-248)||(2732707-2732763)
chr3 (173-244)||(4478344-4478415)
chr3 (178-246)||(11668248-11668318)
chr3 (173-248)||(21142709-21142784)
chr3 (173-244)||(24130607-24130678)
chr3 (173-235)||(34344756-34344816)
chr3 (175-244)||(13874814-13874881)
chr3 (178-248)||(19137663-19137733)
chr3 (173-244)||(24559437-24559506)
chr3 (183-240)||(6054211-6054268)
chr3 (184-244)||(16006495-16006553)
chr3 (191-240)||(23237414-23237463)
chr3 (191-244)||(24160522-24160575)
chr3 (203-244)||(31902211-31902252)
chr3 (173-245)||(50144584-50144654)
chr3 (189-241)||(4045626-4045678)
chr3 (204-248)||(14868729-14868773)
chr3 (173-248)||(17439943-17440016)
chr3 (173-248)||(24136728-24136803)
chr3 (173-248)||(27739817-27739890)
chr3 (212-248)||(29645842-29645878)
chr3 (173-244)||(32508772-32508841)
chr3 (173-248)||(39492865-39492938)
chr3 (203-243)||(46006410-46006450)
chr3 (194-222)||(46989036-46989064)
chr3 (173-240)||(47191425-47191490)
chr3 (208-248)||(50271773-50271813)
chr3 (204-248)||(52030165-52030209)
chr3 (187-239)||(55318070-55318122)
[»] chr6 (51 HSPs)
chr6 (173-248)||(9491713-9491786)
chr6 (173-248)||(25020506-25020579)
chr6 (191-246)||(19680242-19680297)
chr6 (173-243)||(20149955-20150026)
chr6 (173-243)||(22182806-22182877)
chr6 (190-244)||(1488136-1488190)
chr6 (173-242)||(17347304-17347373)
chr6 (191-248)||(26669653-26669710)
chr6 (173-248)||(3448396-3448469)
chr6 (173-248)||(12089141-12089214)
chr6 (173-248)||(18904661-18904734)
chr6 (173-248)||(22983624-22983697)
chr6 (173-248)||(23804711-23804784)
chr6 (173-243)||(9438351-9438419)
chr6 (173-244)||(30833065-30833136)
chr6 (191-242)||(34675800-34675851)
chr6 (175-248)||(10455786-10455860)
chr6 (179-244)||(14949001-14949067)
chr6 (173-231)||(34883799-34883857)
chr6 (173-218)||(3243890-3243935)
chr6 (191-248)||(7234009-7234066)
chr6 (184-240)||(8176048-8176105)
chr6 (179-248)||(24256960-24257029)
chr6 (174-230)||(31741442-31741496)
chr6 (191-248)||(34524919-34524976)
chr6 (204-248)||(6658550-6658594)
chr6 (191-243)||(29430297-29430349)
chr6 (173-248)||(34396127-34396200)
chr6 (173-247)||(5134412-5134484)
chr6 (173-248)||(6455497-6455572)
chr6 (189-243)||(15126291-15126343)
chr6 (189-244)||(29204861-29204916)
chr6 (178-228)||(3037570-3037620)
chr6 (173-242)||(6652259-6652326)
chr6 (178-243)||(9422882-9422948)
chr6 (173-248)||(14981680-14981753)
chr6 (191-240)||(22730695-22730745)
chr6 (176-248)||(6270590-6270660)
chr6 (191-239)||(8309217-8309266)
chr6 (173-242)||(9051267-9051336)
chr6 (173-218)||(17123261-17123306)
chr6 (174-244)||(29284166-29284234)
chr6 (173-244)||(753290-753359)
chr6 (189-240)||(3030018-3030070)
chr6 (212-248)||(4854321-4854357)
chr6 (212-248)||(6228275-6228311)
chr6 (173-248)||(6530182-6530255)
chr6 (173-248)||(16119323-16119398)
chr6 (212-248)||(18903382-18903418)
chr6 (204-248)||(24470398-24470442)
chr6 (173-225)||(32372511-32372563)
[»] scaffold0308 (1 HSPs)
scaffold0308 (173-248)||(7120-7193)
[»] scaffold0119 (1 HSPs)
scaffold0119 (191-248)||(1083-1140)
[»] scaffold1603 (1 HSPs)
scaffold1603 (189-241)||(651-703)
[»] scaffold0636 (1 HSPs)
scaffold0636 (183-240)||(8809-8866)
[»] scaffold0219 (1 HSPs)
scaffold0219 (208-248)||(6644-6684)
[»] scaffold0044 (1 HSPs)
scaffold0044 (173-248)||(49864-49937)
[»] scaffold0039 (1 HSPs)
scaffold0039 (173-248)||(101875-101948)
[»] scaffold0009 (2 HSPs)
scaffold0009 (173-248)||(185490-185563)
scaffold0009 (184-243)||(62762-62821)
[»] scaffold0126 (1 HSPs)
scaffold0126 (196-242)||(22849-22895)
[»] scaffold0054 (1 HSPs)
scaffold0054 (191-248)||(67205-67262)
[»] scaffold0001 (1 HSPs)
scaffold0001 (212-248)||(419756-419792)


Alignment Details
Target: chr2 (Bit Score: 136; Significance: 5e-71; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 44487588 - 44487818
Alignment:
Q  17 ttaacgacgtacacttttacaaactaaaattatcactttgttataaaattaatnnnnnnnnnttgttttgaggagaacgaaataaaattaaaattaaaga 116  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  44487588 ttaacaacgtacacttttacaaactaaaattatcaatttgttataaaattaattaaaaaaa-ttgttttgaggagaacgaaataaaattaaaattaaaga 44487686  T
Q  117 tatatttggtccaactcgtacatgccaacaaggattctatttgccaagnnnnnnnngtcaggtagcctagtagttagaattcaccttttttaaggtgaat 216  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||||        |||||||||  |||| ||||||||||||||||||||||||||||    
T  44487687 tatatttggtccaactaatacatgccaacagggattctatttgccaagttttttttgtcaggtaggttagtggttagaattcaccttttttaaggtgaat 44487786  T
Q  217 aaatgggatgtccggggttcgaaccccggccc 248  Q
    || ||||||||||||||||||||| |||||||    
T  44487787 aagtgggatgtccggggttcgaactccggccc 44487818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 5807750 - 5807810
Alignment:
Q  180 agcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||    
T  5807750 agcctagtagttagaattcacctttttcaaggtgaataagtgggatgtctagggttcgaac 5807810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 33124352 - 33124416
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| ||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||    
T  33124352 tagtggttagaattcaccttttttaaggtgaataaatgtggtgttcggggttcgaacctcggccc 33124416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 1244685 - 1244618
Alignment:
Q  176 aggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||||| ||||| | |||||||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  1244685 aggtagtctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccc 1244618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 12206617 - 12206546
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||| | |||||||||||||||| |||||||||||  ||| ||| ||||||||||||||||    
T  12206617 gtcaggtagcctagtggctagaattcacctttttcaaggtgaataagcggggtgttcggggttcgaaccccg 12206546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 6952370 - 6952316
Alignment:
Q  194 aattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  6952370 aattcaccttttttaaggtgaataaatggggtgtctggggttcgaaccccagccc 6952316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 8234772 - 8234843
Alignment:
Q  175 caggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||| | ||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||    
T  8234772 caggtagcctagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggccc 8234843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 38581582 - 38581648
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaa 239  Q
    |||| |||||||||| |||||||| ||||||||||||| ||||||| ||||||||||| ||||||||    
T  38581582 gtcaagtagcctagtggttagaatacaccttttttaagatgaataagtgggatgtccgaggttcgaa 38581648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 580761 - 580834
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||||||| ||| |  ||||||||||| |||| ||||||||||||||||||||||||    
T  580761 gtcaggtagcctagtggctagaattcatcttat--aaggtgaataagtggggtgtccggggttcgaaccccggccc 580834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 17154766 - 17154693
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||| ||||||| |  ||||||||||| |||| ||||||||||||||||||||||||    
T  17154766 gtcaggtagcctagtggctagaactcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggccc 17154693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 34018048 - 34018121
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| |||||||||||||  || |||||||||||| |||| |||||| |||||||||||| ||||    
T  34018048 gtcaggtagcctagtggttagaattcacc--ttataaggtgaataagtggggtgtccgaggttcgaaccccagccc 34018121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 17115523 - 17115587
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||||||||||||| | ||||||||||||| |  || ||||||||||||||||||||||||||||||    
T  17115523 tcaggtagcctagttgctagaattcaccttat--aaagtgaataaatgggatgtccggggttcgaac 17115587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 35694771 - 35694830
Alignment:
Q  188 agttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggcc 247  Q
    ||||| |||||| |||||||||| |||||||||||| |||| ||||||||||||||||||    
T  35694771 agttataattcatcttttttaagatgaataaatggggtgtctggggttcgaaccccggcc 35694830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 2057581 - 2057531
Alignment:
Q  190 ttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||||||||||||||||||||||| |||| |||||||| |||||||    
T  2057581 ttagaattcaccttttttaaggtgaataagtggggtgtccgggattcgaac 2057531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 3037602 - 3037673
Alignment:
Q  175 caggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||   ||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||    
T  3037602 caggtagcctagtgcctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggccc 3037673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 26975275 - 26975344
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||| ||||| |||| ||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||    
T  26975275 gtcaagtagcgtagtggttagaattaaccttttttaaagtgaataactggg-tgtccggggttcgaacccc 26975344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 7086370 - 7086297
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| ||||| ||||||||||||||| |  ||||||||||| |||| ||| ||||||||||| ||||||||    
T  7086370 gtcaggtagtctagtggttagaattcaccttat--aaggtgaataattggggtgttcggggttcgaatcccggccc 7086297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 11133193 - 11133124
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||| |||||| | ||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||    
T  11133193 gtcaggtaacctagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccg 11133124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 20122454 - 20122526
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||| | ||||||||||||| |  ||| ||||||| |||  ||||||||||||||||||||||||    
T  20122454 tcaggtagcctagtggctagaattcaccttat--aagatgaataagtggcgtgtccggggttcgaaccccggccc 20122526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 33001532 - 33001604
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||||| |||||||||||  || |||| ||||||| |||| |||||||| ||| |||||||||||    
T  33001532 tcaggtagcctagtagctagaattcacc--ttataagatgaataagtggggtgtccgggattcaaaccccggccc 33001604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 34830705 - 34830630
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||| | | |||||||  | ||||| |||| ||||||||||| ||||||| ||||||||||||||||    
T  34830705 gtcaggtagcctattggctagaattttcatttttcaaggagaataaatggggtgtccggagttcgaaccccggccc 34830630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 39334857 - 39334932
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||| ||||| | |||||||||||||||| || |||||||| ||||||||| || ||||||||||| ||||    
T  39334857 gtcaagtagtctagtggctagaattcacctttttcaaagtgaataagtgggatgtctggagttcgaaccccagccc 39334932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 279791 - 279847
Alignment:
Q  189 gttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggc 246  Q
    |||| ||||||||||||| ||| ||||||| ||||||||||||||||| |||||||||    
T  279791 gttaaaattcaccttttt-aagatgaataagtgggatgtccggggttcaaaccccggc 279847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 11837103 - 11837037
Alignment:
Q  176 aggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||| | ||||||||||  ||| |||||||||||| || | ||||||||||||||||||||    
T  11837103 aggtagcctagtggctagaattcac--tttataaggtgaataagtgaggtgtccggggttcgaaccccg 11837037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 19064869 - 19064934
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaa 239  Q
    |||||||| ||||||||||||||  || |||| ||||||||||||||||| ||| || ||||||||    
T  19064869 tcaggtagtctagtagttagaatctactttttctaaggtgaataaatggggtgttcgaggttcgaa 19064934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 22297462 - 22297503
Alignment:
Q  207 taaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  22297462 taaggtgaataaatggggtgtccggggttcgaacccctgccc 22297503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 19905633 - 19905702
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||| | | ||||||||||||| |  ||||||||||| | || ||||||||||||||||||||    
T  19905633 gtcaggtagcctaatggctagaattcaccttat--aaggtgaataagtcgggtgtccggggttcgaaccccg 19905702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 25463242 - 25463310
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||| |||||||||| |||||||||||  ||||| |||||||||||| ||| ||| ||| |||||||||    
T  25463242 gtcaagtagcctagtggttagaattcatttttttcaaggtgaataaaaggggtgttcggagttcgaacc 25463310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 29035064 - 29035020
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| |||| ||||||||||||||||||||||||    
T  29035064 ttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 29035020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 30737095 - 30737043
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccg 230  Q
    ||||||||||   |||||||||| ||||||||||||||||| |||||||||||    
T  30737095 gtagcctagtgactagaattcacattttttaaggtgaataagtgggatgtccg 30737043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 44422224 - 44422159
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||||||||| ||||||||| |||  || ||| |||||||| |||| ||||||||||||||||    
T  44422224 gtcaggtagcctagtggttagaatttacc--ttataaagtgaataagtggggtgtccggggttcgaac 44422159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 44721682 - 44721751
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||| || |||||| | ||||||||||||| |  |||||||||||||||| |||||| |||||||||||||    
T  44721682 gtcagataacctagtggctagaattcaccttat--aaggtgaataaatggggtgtccgaggttcgaaccccg 44721751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 2114414 - 2114482
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||| | ||| | ||||||||||||| |  |||||||||||||| | ||||||||||||||||||||    
T  2114414 tcaggtagtccagtggctagaattcaccttat--aaggtgaataaatgaggtgtccggggttcgaaccccg 2114482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 2971128 - 2971167
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatggg 223  Q
    |||| |||||||||||||||||||||||||||||| ||||    
T  2971128 tagttgttagaattcaccttttttaaggtgaataagtggg 2971167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 32256255 - 32256184
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| ||||||||||   || |||||| |||||| || |||||||| |||||||||||| ||||||||||||    
T  32256255 gtcaagtagcctagtgactataattcaactttttcaatgtgaataagtgggatgtccggagttcgaaccccg 32256184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 36413879 - 36413804
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||||||| | | || ||||||||||||| || |||||||| |||| ||||| |||||||||| |||||||    
T  36413879 gtcaagtagcctaatggctaaaattcacctttttcaaagtgaataagtggggtgtccagggttcgaactccggccc 36413804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 39118512 - 39118445
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||| ||||| | |||||||| |||||||||||| |||||| |||| ||| |||| |||||||    
T  39118512 gtcaggtagtctagtggctagaattctccttttttaaggagaataagtggggtgttcgggattcgaac 39118445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 41195920 - 41195992
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggcc 247  Q
    ||||||||||||||| | ||||||||||||| ||  ||||||||||||| | ||| |||| ||||||| ||||||    
T  41195920 gtcaggtagcctagtggctagaattcaccttatt--aggtgaataaatgaggtgttcgggattcgaactccggcc 41195992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 2304407 - 2304338
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||| ||||||| |||||   |||||| || ||||| |||| ||||||||||||||||||||    
T  2304407 gtcaggtagcctagtggttagaaattcac---ttttaaagtaaataagtggggtgtccggggttcgaaccccg 2304338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 5029076 - 5029150
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggcc 247  Q
    ||||||||| ||||| | ||||||||| |||||| ||||||||||| |||| ||| || | ||||||| ||||||    
T  5029076 gtcaggtagtctagtgggtagaattcatctttttcaaggtgaataagtggggtgttcgagattcgaactccggcc 5029150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 14307688 - 14307738
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||||||||| |||||||| |||||||| |||| ||| |||||||||||||    
T  14307688 tagaattcactttttttaaagtgaataagtggggtgttcggggttcgaacc 14307738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 23405296 - 23405247
Alignment:
Q  194 aattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||| ||||||||||| |||| ||||| ||||||||||||||    
T  23405296 aattcaccttttt-aaggtgaataagtggggtgtccagggttcgaaccccg 23405247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 25406643 - 25406697
Alignment:
Q  190 ttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||| |||||||  ||||||||||| |||| ||||||| ||||||||||||    
T  25406643 ttagaattgaccttttccaaggtgaataagtggggtgtccggagttcgaaccccg 25406697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 38242712 - 38242662
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||||||||| |||||||| ||||||||||||| | |||| ||||||||||    
T  38242712 tagaattcacattttttaaagtgaataaatgggttatccgaggttcgaacc 38242662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 1778875 - 1778944
Alignment:
Q  176 aggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccgg 245  Q
    |||||||||||  | |||||||||  |||||||| |||||||||||  |||| ||| |||||||||||||    
T  1778875 aggtagcctagcggctagaattcatattttttaaagtgaataaatgaaatgttcggagttcgaaccccgg 1778944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 3179441 - 3179375
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    ||||||||||||||| | |||||||||||  || |||||||||||| |||| |||| | ||||||||||    
T  3179441 gtcaggtagcctagtggctagaattcacc--ttataaggtgaataagtggggtgtctgaggttcgaacc 3179375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 34034438 - 34034397
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccgg 245  Q
    |||||| |||||||| |||| |||||||||||||||||||||    
T  34034438 ttttaaagtgaataagtggggtgtccggggttcgaaccccgg 34034397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 1836705 - 1836636
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||| ||||||||| | ||||||||||||| | |  ||||||||| | || ||||||||||||||||||||    
T  1836705 gtcagatagcctagtggctagaattcaccttatat--ggtgaataagtagggtgtccggggttcgaaccccg 1836636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 7889346 - 7889310
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||||||||||||||| || ||||||||||||    
T  7889346 ttttaaggtgaataaatgggacgttcggggttcgaac 7889310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 18424167 - 18424203
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  18424167 tgaataagtgggatgtccggagttcgaaccccggccc 18424203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 29713083 - 29713135
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||| |||||||||||| ||||| | || |||| ||||||||||||||    
T  29713083 tagaattcatcttttttaaggtaaataagtagggtgtctggggttcgaacccc 29713135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 30474173 - 30474246
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||| || ||| | ||||||||||||| |  ||||||||||| |||| |||| |||||||||||| ||||||    
T  30474173 gtcaggtaacccagtggctagaattcaccttat--aaggtgaataagtggggtgtctggggttcgaacctcggccc 30474246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 32527084 - 32527128
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| |||| |||| |||||||||||||||||||    
T  32527084 ttttaaagtgaataagtgggttgtctggggttcgaaccccggccc 32527128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 34107393 - 34107325
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||| |||| ||||| | |||||||||| ||||| ||||||||||| |||| |||| || |||||||||    
T  34107393 gtcaagtagtctagtggctagaattcacatttttcaaggtgaataagtggggtgtctggagttcgaacc 34107325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 43871070 - 43870999
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggc 246  Q
    ||||||||||||||| | ||||| |||||   |||||| |||||||| |||| |||||||| |||||||||||||    
T  43871070 gtcaggtagcctagtggctagaaattcac---ttttaaagtgaataagtggggtgtccgggattcgaaccccggc 43870999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 3535912 - 3535985
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggc 246  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||    
T  3535912 gtcaggtagcctagtggttagaattcactttttttaaggtgaataagtggggtgtccggggttcgaaccccggc 3535985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 29561756 - 29561692
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||||||||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||    
T  29561756 tagtggttagaattcacctttttcaagatgaataagtgggatgtctggggttcgaaccccggccc 29561692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 39684347 - 39684295
Alignment:
Q  183 ctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggtt 235  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  39684347 ctagtggttagaattcaccttttttaaggtgaataagtgggatgtccggggtt 39684295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 10943832 - 10943760
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||| | ||||||||||  ||||||| |||||||| |||| ||||||||||||||||||||||||    
T  10943832 tcaggtagcctagtggctagaattcac--tttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 10943760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 28537254 - 28537179
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||||||||| | ||||||||||| |||| || |||||||| |||| ||||||||||||||||||||||||    
T  28537254 gtcaagtagcctagtggctagaattcaccattttcaaagtgaataagtggggtgtccggggttcgaaccccggccc 28537179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 38618660 - 38618732
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||| | ||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||    
T  38618660 tcaggtagcctagttgctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggccc 38618732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 37986848 - 37986906
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttc 236  Q
    |||||||||| | |||||||||||||||| ||||||||||| |||||||||||||||||    
T  37986848 gtagcctagtggctagaattcacctttttcaaggtgaataagtgggatgtccggggttc 37986906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 17137846 - 17137914
Alignment:
Q  176 aggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||| |||||||||||| ||||| ||||||||||| |||  |||| |||||||||||||||    
T  17137846 aggtagcctagtggttagaattcacgtttttcaaggtgaataagtggagtgtcgggggttcgaaccccg 17137914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 29096286 - 29096359
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||||||||||| |  ||||||||||| |||| |||||||||||||||| |||||||    
T  29096286 gtcaggtagcctagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaactccggccc 29096359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 32158392 - 32158465
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||||||||||| |  ||||||||||| |||| ||| ||||||||||||||||||||    
T  32158392 gtcaggtagcctagtggctagaattcaccttat--aaggtgaataagtggggtgttcggggttcgaaccccggccc 32158465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 40384352 - 40384300
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||||||||||    
T  40384352 tagaattcaccttttttaaggtgaataagtggggtgtccggagttcgaacccc 40384300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 34010654 - 34010587
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||| |||||   ||||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  34010654 gtcaggtagtctagtgactagaattcaccttatataaggtgaataaatgagatgtccggggttcgaac 34010587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 42260696 - 42260767
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||  |||||| ||||||||| |||||| ||||||||||| |||||||||||| ||||||| ||||    
T  42260696 gtcaggtagtttagtagctagaattcatctttttaaaggtgaataagtgggatgtccggagttcgaaacccg 42260767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 6291104 - 6291046
Alignment:
Q  183 ctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    ||||| |||||||||||||||||| || ||||||||||||| |||| ||||||||||||    
T  6291104 ctagtggttagaattcacctttttcaatgtgaataaatggggtgtctggggttcgaacc 6291046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 21017582 - 21017652
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttt-taaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||||||||||| | | ||||||||||||| || |||||||||||| ||||||||||||||||| ||||||    
T  21017582 tcaggtagcctactggctagaattcaccttattataaggtgaataagtgggatgtccggggttcaaacccc 21017652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 33600008 - 33599958
Alignment:
Q  193 gaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||| |||||||||||||||||||| ||||||||||||| ||||||||||    
T  33600008 gaatttaccttttttaaggtgaataagtgggatgtccgggattcgaacccc 33599958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 33801008 - 33800937
Alignment:
Q  175 caggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| ||||| ||||||| |  ||||||||||| |||| |||| |||||||||||||||||||    
T  33801008 caggtagcctagtagctagaactcaccttat--aaggtgaataagtggggtgtctggggttcgaaccccggccc 33800937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 22687859 - 22687920
Alignment:
Q  175 caggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttc 236  Q
    ||||||| ||||| |||||||||||||||||| ||||||||||| |||| ||| ||||||||    
T  22687859 caggtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgttcggggttc 22687920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 31556931 - 31556870
Alignment:
Q  179 tagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||| | ||||||||||| |||| ||||||||||| |||| ||||||||||||||||    
T  31556931 tagcctagtggctagaattcacccttttcaaggtgaataagtggggtgtccggggttcgaac 31556870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 843346 - 843415
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||| | |||||||||   ||| |||||||||||| |||| ||||||||||||||||||||    
T  843346 gtcaggtagcctagtggctagaattcaa--tttataaggtgaataagtggggtgtccggggttcgaaccccg 843415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 18478120 - 18478047
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||| | | ||||||||||||| |  ||||||||||| |||| ||||| ||||||||||||||||||    
T  18478120 gtcaggtagcctaatggctagaattcaccttat--aaggtgaataagtggggtgtccagggttcgaaccccggccc 18478047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 19058982 - 19059055
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| ||||| | ||||||||||||| |  ||||||||||| |||| ||||| ||||||||||||||||||    
T  19058982 gtcaggtaggctagtggctagaattcaccttat--aaggtgaataagtggggtgtccagggttcgaaccccggccc 19059055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 30403867 - 30403794
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||| |||| ||||||||||||||| |  ||||||||||| |||| |||||||||||| ||| |||||||    
T  30403867 gtcaggtagcttagtggttagaattcaccttat--aaggtgaataagtggggtgtccggggttcaaactccggccc 30403794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 31004124 - 31004176
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||| ||||||    
T  31004124 tagaatttaccttttttaaggtgaataagtggaatgtccggggttcaaacccc 31004176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 18101941 - 18102000
Alignment:
Q  189 gttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||| | |||||||||||||||| |||| |||| ||||||||||| |||||||    
T  18101941 gttagaattcatcatttttaaggtgaataagtggggtgtctggggttcgaactccggccc 18102000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 8015934 - 8015879
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||    
T  8015934 tagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggccc 8015879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 18872636 - 18872569
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||| | |||||||||||||    ||||||||||| |||| ||| ||||||||||||||||    
T  18872636 gtcaggtagcctagtggctagaattcacctt----aaggtgaataagtggggtgttcggggttcgaaccccg 18872569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 22396970 - 22397034
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||||||||| | ||||||||||| |||| ||| ||||||| |||| |||||||||||||||||||    
T  22396970 gtagcctagt-gctagaattcacccttttcaagatgaataagtggggtgtccggggttcgaacccc 22397034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 27006441 - 27006388
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||||||| ||||||||||| |||  ||||||| ||||||||||||    
T  27006441 tagaattcacctttttcaaggtgaataagtggagtgtccggagttcgaaccccg 27006388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 38128995 - 38129060
Alignment:
Q  179 tagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||| ||||||||||| | |||| ||||||||||| |||  ||||| ||||||||||||||    
T  38128995 tagcctagtggttagaattcatcattttcaaggtgaataagtggagtgtccagggttcgaaccccg 38129060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 42455375 - 42455445
Alignment:
Q  176 aggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||| | ||||||||||||| |  ||||||||||| |||  |||||||||||||||| |||||||    
T  42455375 aggtagcctagtggctagaattcaccttat--aaggtgaataagtggagtgtccggggttcgaactccggccc 42455445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 1463959 - 1463915
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| |||| ||||||||||||||||||||||||    
T  1463959 ttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 1463915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 13754123 - 13754058
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||||||||||||| ||||||||||||||  || |||| |||||||||||| ||||||  ||||||||    
T  13754123 gtcaggtagcctagcagttagaattcacc--ttataagatgaataaatggggtgtccgacgttcgaac 13754058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 36226113 - 36226182
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||| | || |||||||||| |  ||| |||||||||||  ||||||||||||||||||||    
T  36226113 gtcaggtagcctagtggctataattcaccttat--aagatgaataaatggagtgtccggggttcgaaccccg 36226182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 39760194 - 39760130
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttt-taaggtgaataaatgggatgtccggggttc 236  Q
    ||||||||| | ||| | ||||||||||||| || ||||||||||||||||||||| ||||||||    
T  39760194 gtcaggtagaccagtggctagaattcaccttattataaggtgaataaatgggatgttcggggttc 39760130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 42553128 - 42553188
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| |||||||||||| ||||| ||||||||||| ||   ||||||||||||||||||||    
T  42553128 tagttgttagaattcacatttttcaaggtgaataagtgtagtgtccggggttcgaaccccg 42553188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 8934884 - 8934829
Alignment:
Q  189 gttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||| |||||||| ||||||||||| |||| | ||||||| ||||||||||    
T  8934884 gttagaatttacctttttaaaggtgaataagtggggtatccggggctcgaaccccg 8934829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 11736995 - 11736928
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||| ||| ||||| | |||||||||||||||||||||||||||| | |  ||||||| ||||||||    
T  11736995 gtcagatagtctagtcgctagaattcaccttttttaaggtgaataagttgagtgtccggagttcgaac 11736928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 13862243 - 13862184
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggg 232  Q
    ||||||||||||||| |||||||||| ||||||| |||  |||||| |||| ||||||||    
T  13862243 gtcaggtagcctagtggttagaattctcctttttcaagaagaataagtggggtgtccggg 13862184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 27219546 - 27219614
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||| | ||||||||||||| ||  |||||||||| |||| ||| ||||||| ||||||||||||    
T  27219546 gtagcctagtggctagaattcaccttatt--aggtgaataagtggggtgtacggggtttgaaccccggccc 27219614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 33729890 - 33729822
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||| ||||||||||||||| |  ||||||||||| |||| |||| | | |||||||||||||||    
T  33729890 gtagcctagtggttagaattcaccttat--aaggtgaataagtggggtgtctgagattcgaaccccggccc 33729822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 1244705 - 1244772
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    |||||||| |||||| | ||||||||||||| |  ||||||||||| |||| |||| |||||||||||||    
T  1244705 gtcaggtaacctagtggctagaattcaccttat--aaggtgaataagtggggtgtctggggttcgaaccc 1244772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 2058250 - 2058304
Alignment:
Q  194 aattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||||||||||||||||||| | |||  |||||||||||| ||||||    
T  2058250 aattcactttttttaaggtgaataaatgaggtgtatggggttcgaacctcggccc 2058304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 11246475 - 11246541
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| ||||| | |||||||||||||||| ||| ||||||| ||||||||| |||||| || |||||    
T  11246475 gtagtctagtggctagaattcacctttttcaagctgaataagtgggatgtctggggtttgagccccg 11246541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 20735153 - 20735226
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||| |||||   |||||| |||||||| |||| |||||||| |||||||||||||||    
T  20735153 gtcaggtagcctagtggctagaaattcac---ttttaaagtgaataagtggggtgtccgggattcgaaccccggccc 20735226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 27095512 - 27095582
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||| |||| ||||| | |||||||||| |||||| || |||||||||| | |||| ||||||||||||||    
T  27095512 gtcaagtagtctagtggctagaattcacattttttcagatgaataaatgaggtgtctggggttcgaacccc 27095582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 6447486 - 6447531
Alignment:
Q  203 tttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||||||| |||| |||||| |||||||||||||||||    
T  6447486 tttttaaagtgaataagtggggtgtccgaggttcgaaccccggccc 6447531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 20220193 - 20220140
Alignment:
Q  190 ttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||||| ||||||||||| ||||| |||| |||||  ||||||||||||    
T  20220193 ttagaattcacattttttaaggtaaataagtggggtgtccaaggttcgaacccc 20220140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 2029106 - 2029175
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||| ||||||||| | ||||||||||||| |  ||||||||||| |||| ||| ||||||||||| ||||    
T  2029106 gtcagatagcctagtggctagaattcaccttat--aaggtgaataagtggggtgttcggggttcgaatcccg 2029175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 4674822 - 4674862
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||| |||||||| |||| ||||||||||||||||||||    
T  4674822 ttttaaagtgaataagtggggtgtccggggttcgaaccccg 4674862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 7234850 - 7234919
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| |||| ||||| | ||||||||||||| |  |||||||||||||||| | || |||||||||||||||    
T  7234850 gtcaagtagactagtggctagaattcaccttat--aaggtgaataaatggggtatctggggttcgaaccccg 7234919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 20945869 - 20945942
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||  ||||| | ||||||||||||| |  ||||||||||| |||| |||||||  |||||||||||||||    
T  20945869 gtcaggtaatctagtggctagaattcaccttat--aaggtgaataagtggggtgtccggatttcgaaccccggccc 20945942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 29331360 - 29331291
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||| | |||||||||||  || |||| ||||||| |||  ||| ||||||||||||||||    
T  29331360 gtcaggtagcctagtggctagaattcacc--ttataagatgaataagtggagtgttcggggttcgaaccccg 29331291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 31250227 - 31250191
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  31250227 tgaataagtggggtgtccggggttcgaaccccggccc 31250191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 35813219 - 35813286
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||| |||||||||| | |||||||||||||||| || | |||||| |||| ||||| |||||||||||    
T  35813219 gtcaagtagcctagtggctagaattcacctttttcaaag-gaataagtggggtgtcctgggttcgaacc 35813286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 36045141 - 36045181
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||| |||||||| |||| ||||||||||||||||||||    
T  36045141 ttttaaagtgaataagtggggtgtccggggttcgaaccccg 36045181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 38503272 - 38503308
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  38503272 tgaataagtggggtgtccggggttcgaaccccggccc 38503308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 43227946 - 43227910
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  43227946 tgaataagtggggtgtccggggttcgaaccccggccc 43227910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 20610858 - 20610783
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| ||||| | |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  20610858 gtcaggtagtctagtggctagaattcaccttttttaaggtgaataagtgggatgtccggagttcgaaccccggccc 20610783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 27922013 - 27921940
Alignment:
Q  175 caggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||| |||||||||||| ||||||||| ||||||| || |||||| |||||||||||||||||||    
T  27922013 caggtaacctagtggttagaattcacattttttaagatgaataagtgagatgtctggggttcgaaccccggccc 27921940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 49039426 - 49039491
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||||||||| | |||||||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  49039426 gtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccc 49039491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 22478718 - 22478791
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||| |||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||| | ||||||    
T  22478718 gtcaggtaacctagtagttagaattcaccttat--aaggtgaataaatggggtgtccggggttcgaatcacggccc 22478791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 21023337 - 21023398
Alignment:
Q  182 cctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||||| |||||||||||||||||| ||||||||||| |||| |||| ||||||||||||||    
T  21023337 cctagtggttagaattcacctttttcaaggtgaataagtggggtgtcgggggttcgaacccc 21023398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 20753103 - 20753176
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||||||||||| |  ||||||||||| || | ||||||||||||||||||||||||    
T  20753103 gtcaggtagcctagtggctagaattcaccttat--aaggtgaataagtgtggtgtccggggttcgaaccccggccc 20753176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 33359931 - 33359868
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||||||||| | |||||||||||||||| ||||||||||| |||| ||||| |||||||||||    
T  33359931 gtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccagggttcgaacc 33359868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 36257806 - 36257738
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||| | ||||||||||  ||||||| |||||||| |||| ||||||||||||||||||||||||    
T  36257806 gtagcctagtggctagaattcac--tttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 36257738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 53697959 - 53698031
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||| | ||||||||||||| |  ||||| ||||| |||| ||||||||||||||||||||||||    
T  53697959 tcaggtagcctagttgctagaattcaccttat--aaggtaaataagtggggtgtccggggttcgaaccccggccc 53698031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 54854155 - 54854230
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||| ||||| | |||||||||| ||||| ||||||||||| || ||||||||||||||||||||| ||||    
T  54854155 gtcaagtagtctagtggctagaattcacttttttcaaggtgaataagtgtgatgtccggggttcgaaccccagccc 54854230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 28221289 - 28221352
Alignment:
Q  177 ggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    ||||||||||| ||||||||||||||| |  ||||||||||| |||| ||||||||||||||||||    
T  28221289 ggtagcctagtggttagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccc 28221352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 36954254 - 36954185
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||||| ||||| |||||   |||||| ||||||||||||| ||||||||||||||||||||    
T  36954254 gtcaggtagcctagtagctagaaattcac---ttttaaagtgaataaatggggtgtccggggttcgaaccccg 36954185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 55967697 - 55967631
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaa 239  Q
    ||||||||||||||| ||||||||||||| |||| || | |||||| |||| |||||||||||||||    
T  55967697 gtcaggtagcctagtggttagaattcaccattttcaatgcgaataagtggggtgtccggggttcgaa 55967631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 1589152 - 1589199
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaa 239  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  1589152 tagaattcaccttttt-aagatgaataaatgggatgtccggggttcgaa 1589199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 3442960 - 3442887
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| ||| | ||||||||||||||| |  ||||||||||| |||| |||| |||||||||||||||||||    
T  3442960 gtcaggtagtctactggttagaattcaccttat--aaggtgaataagtggggtgtctggggttcgaaccccggccc 3442887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 13073133 - 13073201
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||||| |||||||||||  || |||||| ||||| |||||||||| ||||||||||||||    
T  13073133 gtcaggtagcctagtagctagaattcacc--ttataaggttaataagtgggatgtcc-gggttcgaaccccg 13073201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 56546427 - 56546500
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||||||||  ||||||| |||||||| |||| |||| | |||||||||||||||||    
T  56546427 gtcaggtagcctagtggctagaattcac--tttttaaagtgaataagtggggtgtctgtggttcgaaccccggccc 56546500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 20166435 - 20166360
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||||| |||||||| | ||||| |||| |||||| |||| | || |||||||||||| ||||||    
T  20166435 gtcaggtagcctagtagctagaattctcttttttcaaggagaataagtggggtatctggggttcgaacctcggccc 20166360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 30295630 - 30295562
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||||||||| | ||||||||||||| |  ||||||||||| |||| |||| ||||||||||||||    
T  30295630 gtcaggtagcctagtggctagaattcaccttct--aaggtgaataagtggggtgtctggggttcgaacccc 30295562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 30324532 - 30324464
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||||||||| | ||||||||||||| |  ||||||||||| |||| |||| ||||||||||||||    
T  30324532 gtcaggtagcctagtggctagaattcaccttct--aaggtgaataagtggggtgtctggggttcgaacccc 30324464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 39293643 - 39293580
Alignment:
Q  178 gtagcctagtagttagaattcacctttttt-aaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||| ||||||| ||||||||||||||||| ||||||||||| ||||||||| | |||||||||    
T  39293643 gtagtctagtagctagaattcaccttttttcaaggtgaataagtgggatgtctgaggttcgaac 39293580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 9693079 - 9693006
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||| |||||   |||||| |||||||| |||| ||||||||||||||||||||||||    
T  9693079 gtcaggtagcctagtggctagaaattcac---ttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 9693006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 14149910 - 14149837
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||| |||||   |||||| |||||||| |||| ||||||||||||||||||||||||    
T  14149910 gtcaggtagcctagtggctagaaattcac---ttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 14149837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 28520709 - 28520782
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||| |||||   |||||| |||||||| |||| ||||||||||||||||||||||||    
T  28520709 gtcaggtagcctagtggctagaaattcac---ttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 28520782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 47017942 - 47017997
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||    
T  47017942 tagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggccc 47017997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 48968188 - 48968261
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||| |||||   |||||| |||||||| |||| ||||||||||||||||||||||||    
T  48968188 gtcaggtagcctagtggctagaaattcac---ttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 48968261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 49319507 - 49319441
Alignment:
Q  179 tagcctagtagttagaattcacctttttt-aaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||| | || |||||||||||||| ||||||||||| |||| ||||||||||| ||||||||    
T  49319507 tagcctagtggctataattcaccttttttcaaggtgaataagtggggtgtccggggttggaaccccg 49319441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 53354944 - 53355017
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| ||||||| ||||   ||||||| || ||||| |||| ||||||||||||||||||||||||    
T  53354944 gtcaggtagcctagtggttagaaattca---tttttaaagtaaataagtggggtgtccggggttcgaaccccggccc 53355017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 3465697 - 3465627
Alignment:
Q  176 aggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| ||||| | ||||||||||||| |  ||||||||||| |||| |||||||||||||||| |||||||    
T  3465697 aggtagtctagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaactccggccc 3465627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 23226702 - 23226751
Alignment:
Q  194 aattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||| ||||||||||||||||| || ||||||||| |||||||||||    
T  23226702 aattcacattttttaaggtgaataagtgagatgtccggtgttcgaacccc 23226751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 24039985 - 24039932
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||||||| ||||||||||| || | ||| ||||||||||||||||    
T  24039985 tagaattcacctttttcaaggtgaataagtgaggtgttcggggttcgaaccccg 24039932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 36008389 - 36008319
Alignment:
Q  176 aggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||| | ||||||||||||| |  ||||||||||| |||| ||| ||||||||||||||||||||    
T  36008389 aggtagcttagtggctagaattcaccttat--aaggtgaataagtggggtgttcggggttcgaaccccggccc 36008319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 41346854 - 41346805
Alignment:
Q  194 aattcacctttttt-aaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  41346854 aattcaccttttttgaagctgaataagtgggatgtccggggttcgaaccc 41346805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 47416582 - 47416517
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||| |||| |||||||||||||||||| || |||||||| |||| |||||| | ||||||||||    
T  47416582 gtagcttagtggttagaattcacctttttcaaagtgaataagtggggtgtccgagattcgaacccc 47416517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 548865 - 548938
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||||| || ||||||||  || |||||||||||| |||| |||| | | |||||||||||||||    
T  548865 gtcaggtagcctagtagctaaaattcacc--ttataaggtgaataagtggggtgtctgagtttcgaaccccggccc 548938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 7768794 - 7768838
Alignment:
Q  203 tttttaaggtgaataaatgggatgtccggggttcgaaccccggcc 247  Q
    ||||||| |||||||| |||| |||||||||||||||||||||||    
T  7768794 tttttaaagtgaataagtggggtgtccggggttcgaaccccggcc 7768838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 11084227 - 11084299
Alignment:
Q  173 gtcaggtagcctagtagttagaattcacc-ttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| ||||| |||| ||||||||||||| |||||||| ||||||||||||| ||||| | ||||||| ||||    
T  11084227 gtcaagtagcatagtggttagaattcacctttttttaaagtgaataaatggggtgtcccgagttcgaatcccg 11084299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 12856301 - 12856236
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||| |||| |||| ||||||||||||||| |  ||||||||||| |||| ||||||||||||||||    
T  12856301 gtcagatagcatagtggttagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaac 12856236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 17859895 - 17859822
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | |||||||||||  || |||||||||||| || | ||| |||||||||||| |||||||    
T  17859895 gtcaggtagcctagtggctagaattcacc--ttataaggtgaataagtgaggtgttcggggttcgaactccggccc 17859822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 37997840 - 37997892
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||| | |||||||||||||||| |||| |||| ||||||||||||||    
T  37997840 tagaattcatcctttttaaggtgaataagtggggtgtctggggttcgaacccc 37997892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 38433428 - 38433363
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||||||||| |||| |||||||||||||  || |||||||||||| |||| |||| |||||||||||    
T  38433428 gtcaggtagcttagttgttagaattcacc--ttataaggtgaataagtggggtgtctggggttcgaac 38433363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 41003150 - 41003215
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||||||||| |||||||||||  | || |||||||||||| |||| ||||||| ||||||||    
T  41003150 gtcaggtagcctagtggttagaattca--tcttgtaaggtgaataagtggggtgtccggagttcgaac 41003215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 49743470 - 49743406
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||| ||||||||||||| ||||| ||||| || | ||||||||||||||| ||||||||    
T  49743470 tagtggttaaaattcacctttttcaaggtaaataagtgaggtgtccggggttcgaatcccggccc 49743406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 4419678 - 4419737
Alignment:
Q  189 gttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||| ||||| |||||||||||||| | ||| | ||||| ||||||||||||    
T  4419678 gttagaattcacttttttcaaggtgaataaatgaggtgttctgggtttgaaccccggccc 4419737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 6202704 - 6202653
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    |||||||||||||||| ||| ||||||| | || ||||||||||||||||||    
T  6202704 tagaattcacctttttcaagatgaataagtagggtgtccggggttcgaaccc 6202653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 15853941 - 15853866
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||  ||| ||| |||||||| ||||||||||||  ||||| |||| ||||| ||||||||||||| ||||    
T  15853941 gtcaggtaatctaatagctagaattctccttttttaaggataataactggggtgtccagggttcgaaccccagccc 15853866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 30203373 - 30203298
Alignment:
Q  173 gtcaggtagcctagtagttagaattcacctttttt-aaggtgaataaatgggatgtccggggttcgaaccccggcc 247  Q
    |||| |||||||||| |||||||| ||| |||||| ||| ||||||| |||  | |||||||||||||||||||||    
T  30203373 gtcaagtagcctagtggttagaatacacattttttcaagatgaataagtggagtatccggggttcgaaccccggcc 30203298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 33076648 - 33076578
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||| |||| | || |||||| |||||| ||||||||||| | || ||||||||||||||||||||    
T  33076648 gtcaggtagcatagtggctataattcatcttttt-aaggtgaataagtagggtgtccggggttcgaaccccg 33076578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 41492475 - 41492549
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| ||| |||||| | |||||||||||||||| ||||| ||||| |||| |||||  |||||||||||||||||    
T  41492475 gtcaagtaacctagtggctagaattcacctttttcaaggtaaataagtggggtgtcc-aggttcgaaccccggccc 41492549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 53468814 - 53468740
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| | ||| ||||||||||| |||||  ||||| ||||| | || ||||||||||||||||||||||||    
T  53468814 gtcaggtagaccagtggttagaattcatcttttc-aaggtaaataagtagggtgtccggggttcgaaccccggccc 53468740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 8690331 - 8690262
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||| | ||||| |||||   |||||| |||||||| |||| ||||||||||||||||||||    
T  8690331 gtcaggtagcctagtggctagaaattcac---ttttaaagtgaataagtggggtgtccggggttcgaaccccg 8690262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 12585540 - 12585610
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| ||||| | |||||||||||||||| ||| ||||||| || | ||| |||||||||||| |||||||    
T  12585540 gtagtctagtggctagaattcacctttttcaagatgaataagtgaggtgttcggggttcgaactccggccc 12585610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 29785240 - 29785194
Alignment:
Q  202 ttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||| ||||||||||| |||| ||||||||||||||||||| ||||    
T  29785240 tttttcaaggtgaataagtggggtgtccggggttcgaaccccagccc 29785194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 46799495 - 46799453
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggc 246  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||    
T  46799495 ttttaaagtgaataaatggggtgtccggggttcgaacctcggc 46799453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 54304907 - 54304974
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    ||||||||||||||| | |||||||||||  || |||| ||||||| |||||||| |||| |||||||||    
T  54304907 gtcaggtagcctagtggctagaattcacc--ttataagctgaataagtgggatgttcgggattcgaaccc 54304974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 15021541 - 15021471
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggc 246  Q
    |||||||||||||| | || |||||||||| |  ||||||||||| |||| ||| |||||||||||| |||||    
T  15021541 tcaggtagcctagtggctataattcaccttat--aaggtgaataagtgggctgttcggggttcgaactccggc 15021471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 18497482 - 18497441
Alignment:
Q  202 ttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||||||||| |||||| |||||||||||| |||||||||||    
T  18497482 ttttttaaggagaataagtgggatgtccggagttcgaacccc 18497441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 32048554 - 32048606
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||| |||||||| ||||||||||||| |||| ||||||| |||||||    
T  32048554 tagaattcac-ttttttaaagtgaataaatgggctgtctggggttcaaaccccg 32048606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 37274665 - 37274624
Alignment:
Q  207 taaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| ||||||| |||| ||||||||||||||||||||||||    
T  37274665 taagatgaataagtggggtgtccggggttcgaaccccggccc 37274624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 52743324 - 52743278
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatg 221  Q
    ||||||||||||||||| |||||||||||  || |||||||||||||||    
T  52743324 gtcaggtagcctagtagctagaattcacc--ttataaggtgaataaatg 52743278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 6481578 - 6481634
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggcc 247  Q
    ||||||||||| |||||||||||||||| ||||  ||| | |||||||||| |||||    
T  6481578 tagaattcaccatttttaaggtgaataagtggggcgtctgaggttcgaacctcggcc 6481634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 10098242 - 10098169
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| ||||| | ||||||||| ||| |  ||| ||||||| |||| ||||||||||||||| ||||||||    
T  10098242 gtcaggtagtctagtggctagaattcatcttat--aagatgaataagtggggtgtccggggttcgaatcccggccc 10098169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 16323855 - 16323911
Alignment:
Q  189 gttagaattcacctttttt-aaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||| |||||| || |||||||| |||||||||||| || |||||||||    
T  16323855 gttagaattcacttttttttaaagtgaataagtgggatgtccggtgtgcgaaccccg 16323911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 21476059 - 21476124
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||| |||||||||| | ||||||||||  ||| |||| ||||||| |||||||||||| ||||||||    
T  21476059 gtcaagtagcctagtggctagaattcac--tttataagatgaataagtgggatgtccggagttcgaac 21476124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 21664197 - 21664130
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||| |||||||||| |||||||||||||||| | ||| ||||||| | ||||||| ||| ||||||||    
T  21664197 gtcaagtagcctagtggttagaattcacctttctcaagatgaataagt-ggatgtctgggattcgaacc 21664130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 21672961 - 21672894
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||| |||||||||| |||||||||||||||| | ||| ||||||| | ||||||| ||| ||||||||    
T  21672961 gtcaagtagcctagtggttagaattcacctttctcaagatgaataagt-ggatgtctgggattcgaacc 21672894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 244
Target Start/End: Original strand, 35909175 - 35909210
Alignment:
Q  208 aaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||||| |||||||||||||||||||    
T  35909175 aaggtgaataaatggga-gtccggggttcgaaccccg 35909210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 42758161 - 42758209
Alignment:
Q  194 aattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    |||||| |||||| ||||||||||| |||| ||||| ||||||||||||    
T  42758161 aattcatctttttgaaggtgaataagtggggtgtccagggttcgaaccc 42758209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 43049937 - 43049985
Alignment:
Q  194 aattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    |||| |||||||||||| |||||||||||||||   |||||||||||||    
T  43049937 aatttaccttttttaagatgaataaatgggatgatgggggttcgaaccc 43049985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 43115353 - 43115321
Alignment:
Q  207 taaggtgaataaatgggatgtccggggttcgaa 239  Q
    ||||||||||||||||| |||||||||||||||    
T  43115353 taaggtgaataaatggggtgtccggggttcgaa 43115321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 45350377 - 45350328
Alignment:
Q  189 gttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||||||||||  |||| |||||||||||| |||| ||||||||||||||||    
T  45350377 gttagaattca--ttttataaggtgaataagtggggtgtccggggttcgaac 45350328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 45359856 - 45359807
Alignment:
Q  189 gttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||||||||||  |||| |||||||||||| |||| ||||||||||||||||    
T  45359856 gttagaattca--ttttataaggtgaataagtggggtgtccggggttcgaac 45359807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 51536976 - 51536903
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| ||||| | ||||||||||||  |  ||| ||||||| ||||||| ||| |||||||||||||||||    
T  51536976 gtcaggtagtctagtggctagaattcacctgat--aagatgaataagtgggatgcccgaggttcgaaccccggccc 51536903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 52330916 - 52330960
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| |||| ||||||| ||||||||||||||||    
T  52330916 ttttaaagtgaataagtggggtgtccggagttcgaaccccggccc 52330960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 9768785 - 9768856
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  9768785 gtcaggtagcctagtagctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccg 9768856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 50199452 - 50199527
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  50199452 gtcaggtagcctagtggctagaattgacctttttcaaggtgaataagtggggtgtccggggttcgaaccccggccc 50199527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 9769556 - 9769626
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||||||||| |||| |||||||||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  9769556 gtcaggtagcttagtggttagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccc 9769626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 3341712 - 3341787
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| | |||||||||||||||| ||||||||||| |||| |||||||||||||| |||||||||    
T  3341712 gtcaggcagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgatccccggccc 3341787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 12553313 - 12553243
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||||||||| | |||||||||||||||| || |||||||| |||| |||||||||||||||||||    
T  12553313 gtcaggtagcctagtggctagaattcacctttttcaaagtgaataagtggggtgtccggggttcgaacccc 12553243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 41677178 - 41677108
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||||| | |||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||    
T  41677178 tcaggtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggagttcgaaccccg 41677108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 37733872 - 37733803
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||| ||||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||    
T  37733872 gtcaggtagcctagtggttagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccg 37733803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 46116152 - 46116225
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| ||||||||||||||| |  ||||||||||| |||| ||||||||||||||||||| ||||    
T  46116152 gtcaggtagcctagtggttagaattcaccttat--aaggtgaataattggggtgtccggggttcgaaccccagccc 46116225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 38028656 - 38028581
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||||| |||| ||||  |||||||||| |||||||    
T  38028656 gtcaagtagcctagtagttagaattcacatttttcaaggtgaataagtggggtgtctagggttcgaactccggccc 38028581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 1721241 - 1721184
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||||||||||||||||| || | ||||||||||||||| ||||||||    
T  1721241 tagaattcaccttttttaaggtgaataagtgaggtgtccggggttcgaaacccggccc 1721184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 19793643 - 19793570
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| |||||||||||||  || |||||||||||| |||| |||||||||||||||  |||||||    
T  19793643 gtcaggtagcctagtggttagaattcacc--ttataaggtgaataagtggggtgtccggggttcgaattccggccc 19793570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 52833113 - 52833157
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  52833113 ttttaaagtgaataaatgggatgtccggggttcgaaccccggccc 52833157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 2643791 - 2643862
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||| ||||| |||||| ||||| ||||||||||||||||| |||| |||| ||||||| |||||||    
T  2643791 gtcaggtagtctagtggttagagttcacattttttaaggtgaataagtggggtgtctggggttcaaaccccg 2643862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 9931206 - 9931139
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||| |||| ||||||||||||||||||||| |||||||||||||| |||| |||  |||||||||||    
T  9931206 gtcaagtagtctagtagttagaattcaccttctttaaggtgaataagtggggtgtttggggttcgaac 9931139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 3532952 - 3533019
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    ||||||||||||||||| |||||||||||  || |||||||||||| |||| ||||||||||| ||||||    
T  3532952 gtcaggtagcctagtagctagaattcacc--ttataaggtgaataagtggggtgtccggggttggaaccc 3533019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 9976361 - 9976431
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||| |||| | |||||||||| ||||| ||||||||||| |||| ||||||| ||||||||||||    
T  9976361 tcaggtagcgtagtggctagaattcacttttttcaaggtgaataagtggggtgtccggagttcgaaccccg 9976431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 195163 - 195095
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||| ||||| |||| |||||||||||||||||| ||||||||||| |||| |||| ||||| ||||||    
T  195163 gtcaagtagcttagtggttagaattcacctttttcaaggtgaataagtggggtgtctggggtacgaacc 195095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 4511512 - 4511560
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggg 232  Q
    |||| |||||||||||||||||||||||||||||| ||||| |||||||    
T  4511512 tagtggttagaattcaccttttttaaggtgaataagtgggacgtccggg 4511560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 11405573 - 11405504
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||| |||| | ||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||    
T  11405573 gtcaggtagcttagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccg 11405504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 15368922 - 15368849
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||||||||||| |  ||  ||||||| |||| ||||||||||||||||||||||||    
T  15368922 gtcaggtagcctagtggctagaattcaccttataaaa--tgaataagtggggtgtccggggttcgaaccccggccc 15368849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 15774290 - 15774359
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||| |||| | ||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||    
T  15774290 gtcaggtagcttagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccg 15774359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 39994826 - 39994899
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||| ||||||||| | ||||||||||||| |  ||||||||||| ||||||||||||| ||| |||||||||||    
T  39994826 gtcagatagcctagtggctagaattcaccttat--aaggtgaataagtgggatgtccgggattcaaaccccggccc 39994899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 50859345 - 50859418
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||||||||| | |||||||||||||||  ||||||||||  |||| ||||||||||| ||||||||||||    
T  50859345 gtcaagtagcctagtggctagaattcacctttt--aaggtgaatatgtggggtgtccggggtttgaaccccggccc 50859418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 2903003 - 2903074
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| ||| |||||| | |||||||| ||||||| ||||||||||| |||| ||| ||||||||||||||||    
T  2903003 gtcaagtaacctagtggctagaattctcctttttcaaggtgaataagtggggtgttcggggttcgaaccccg 2903074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 23750265 - 23750198
Alignment:
Q  177 ggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||| |||||||||||||||||| ||| ||||||| |||| ||| | ||||| ||||||||    
T  23750265 ggtagcctagtggttagaattcacctttttcaagatgaataagtggggtgttcagggtttgaaccccg 23750198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 33844736 - 33844665
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| |||| ||||| | || ||||||||||||| || |||||||| |||| ||||||||||||||||||||    
T  33844736 gtcaagtagtctagtggctataattcacctttttcaaagtgaataagtggggtgtccggggttcgaaccccg 33844665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 33949242 - 33949313
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| |||| ||||| | || ||||||||||||| || |||||||| |||| ||||||||||||||||||||    
T  33949242 gtcaagtagtctagtggctataattcacctttttcaaagtgaataagtggggtgtccggggttcgaaccccg 33949313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 40679888 - 40679829
Alignment:
Q  189 gttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||| |||||||||||| |||||| |||| ||||||  ||||||||||||||||    
T  40679888 gttagaattctccttttttaaggagaataagtggggtgtccgaagttcgaaccccggccc 40679829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 47939177 - 47939245
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||||||||| |||||||||||||  |  |||||||||||| |||| ||||||| |||||||||||    
T  47939177 gtcaggtagcctagtggttagaattcacc--taataaggtgaataagtggggtgtccggagttcgaacccc 47939245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 65939 - 65885
Alignment:
Q  187 tagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    ||||| |||||||||||||||||| ||||||||| || |||||||| ||||||||    
T  65939 tagtttgaattcaccttttttaagttgaataaatagggtgtccgggtttcgaacc 65885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 35424259 - 35424193
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaa 239  Q
    |||| |||| ||||| | ||||||||| |||||| |||||||||||||||| | |||||||||||||    
T  35424259 gtcaagtagtctagtggctagaattcatctttttcaaggtgaataaatggggtatccggggttcgaa 35424193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 4288689 - 4288640
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||| ||||||||||||||||||||| | |||| |||||||||||    
T  4288689 tagaattcatcttttttaaggtgaataaatgaggtgtctggggttcgaac 4288640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 11238022 - 11238075
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||||||| ||| ||||||| |||| |||||||| |||||||||||    
T  11238022 tagaattcacctttttcaagatgaataagtggggtgtccgggattcgaaccccg 11238075  T

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Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 18003917 - 18003860
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||||  |||||||||| |||| ||| ||||| ||||||||||||||    
T  18003917 tagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggccc 18003860  T

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Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 27745242 - 27745205
Alignment:
Q  207 taaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  27745242 taaggtgaataaatggggtgtccggggttcgaaccccg 27745205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 48260183 - 48260232
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||||||||| ||||| ||||||||||| |||| ||||||||||||||||    
T  48260183 tagaattcacatttttcaaggtgaataagtggggtgtccggggttcgaac 48260232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 4605819 - 4605867
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatg 221  Q
    ||||||| || ||||  ||||||||||||||||||||||||||||||||    
T  4605819 gtcaggtggcatagtgattagaattcaccttttttaaggtgaataaatg 4605867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 17056858 - 17056931
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| |||||||||||  | |  |||||||||||| ||||  ||| |||||||||||||||||||    
T  17056858 gtcaggtagcctagttgttagaattca--tctagtaaggtgaataagtggggcgtctggggttcgaaccccggccc 17056931  T

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Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 17350149 - 17350105
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| |||| ||||||||||||||||||||||||    
T  17350149 ttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 17350105  T

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Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 19866576 - 19866536
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccgg 231  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  19866576 tagaattcaccttttttaaggtgaataagtggggtgtccgg 19866536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 21884692 - 21884619
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||| ||||| ||||||||||||||| |  ||||||||||| |||| |||| |||||||||||| ||||||    
T  21884692 gtcatgtagtctagtggttagaattcaccttat--aaggtgaataagtggggtgtctggggttcgaacctcggccc 21884619  T

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Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 23930522 - 23930591
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||| | |||| |||||  ||| |||||| |||||||||| ||||| ||||||||||||||    
T  23930522 gtcaggtagcctagtggctagagttcac--tttataaggtaaataaatggggtgtccagggttcgaaccccg 23930591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 32711122 - 32711195
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||| ||| ||||| | ||||||||||||| |  ||||||||||| |||| |||| |||||||||||||||||||    
T  32711122 gtcagatagtctagtggctagaattcaccttat--aaggtgaataagtggggtgtctggggttcgaaccccggccc 32711195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 49251373 - 49251442
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||| |||||| |||||||||||| || |  ||||||||||| |||| |||| |||||||||||||||    
T  49251373 gtcaggtaacctagtggttagaattcacattat--aaggtgaataagtggggtgtctggggttcgaaccccg 49251442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 50147632 - 50147588
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtc 228  Q
    |||| |||||||||||| |||||||||||||||||||||| ||||    
T  50147632 tagtggttagaattcactttttttaaggtgaataaatggggtgtc 50147588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 4354084 - 4354156
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||| || | ||||||||||  ||| |||||||||||| |||| ||||||  ||||||||||||||||    
T  4354084 tcaggtagcctggtggctagaattcac--tttataaggtgaataagtggggtgtccgaagttcgaaccccggccc 4354156  T

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Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 10629450 - 10629415
Alignment:
Q  208 aaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||||||||||||||||| ||||||||||||    
T  10629450 aaggtgaataaatgggatgtccgaggttcgaacccc 10629415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 245
Target Start/End: Original strand, 24168584 - 24168627
Alignment:
Q  202 ttttttaaggtgaataaatgggatgtccggggttcgaaccccgg 245  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||    
T  24168584 ttttttaaggtgaataagtggggtgtctggggttcgaaccccgg 24168627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 35593880 - 35593816
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaa 239  Q
    ||||||||||||||  | ||||||||||||| |  ||||||||||| |||| |||||||||||||||    
T  35593880 gtcaggtagcctagcggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaa 35593816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 1576114 - 1576172
Alignment:
Q  190 ttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||| ||||| ||||| ||||| |||| ||||||||||| ||| ||||||||    
T  1576114 ttagaattcacttttttcaaggtaaataagtggggtgtccggggtttgaatcccggccc 1576172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 7906311 - 7906377
Alignment:
Q  182 cctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| | |||||||||| ||||||||||| |||||  ||| ||||| ||||||||||||| ||||    
T  7906311 cctagtggctagaattcacattttttaaggtcaataagcggggtgtcccgggttcgaaccccagccc 7906377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 27654999 - 27655045
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcg 237  Q
    |||||||||||||||| ||||||||||| |||| |||| ||||||||    
T  27654999 tagaattcacctttttcaaggtgaataagtggggtgtctggggttcg 27655045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 40678940 - 40678867
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||| |||||   |||||| |||||||| |||| ||||||||| ||||||||||||||    
T  40678940 gtcaggtagcctagtggctagaaattcac---ttttaaagtgaataagtggggtgtccggggatcgaaccccggccc 40678867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 43020730 - 43020660
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||| ||||| |||| | |||||||||| ||||| ||||||||| | |||| |||||| ||||||||||||    
T  43020730 gtcaagtagcgtagtggctagaattcacatttttcaaggtgaatgagtggggtgtccgaggttcgaacccc 43020660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 47763363 - 47763436
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||| |||||   |||||| |||||||| ||||||||||| ||||||||| |||||||    
T  47763363 gtcaggtagcctagtggctagaaattcac---ttttaaagtgaataagtgggatgtccgaggttcgaactccggccc 47763436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 50575999 - 50575945
Alignment:
Q  194 aattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||||||||||||| || | |||| | |||||||||||| ||||    
T  50575999 aattcaccttttttaaggtgaataagtgaggtgtctgaggttcgaaccccagccc 50575945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 17889146 - 17889109
Alignment:
Q  207 taaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  17889146 taaggtgaataagtgggatgtccggagttcgaaccccg 17889109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 22346535 - 22346469
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    |||||||||||||| | |||| |||||||| |  |||||||||||||||| ||| | ||||||||||||    
T  22346535 tcaggtagcctagtggctagagttcaccttat--aaggtgaataaatggggtgttcagggttcgaaccc 22346469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 23758228 - 23758297
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaa-tgggatgtccggggttcgaacc 241  Q
    |||| |||| ||||| ||||||||||||  |||||||| |||||||| |||| ||| |||||||||||||    
T  23758228 gtcaagtagtctagtggttagaattcacaatttttaagatgaataaagtggggtgttcggggttcgaacc 23758297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 32635226 - 32635189
Alignment:
Q  206 ttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  32635226 ttaaggtgaataagtggggtgtccggggttcgaacccc 32635189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 38019925 - 38019999
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccgggg-ttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||||||||  ||| |||||||||||| |||| |||| |||| ||||||| |||||||    
T  38019925 gtcaggtagcctagtggctagaattcac--tttataaggtgaataagtggggtgtctggggtttcgaactccggccc 38019999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 39928359 - 39928310
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgg 222  Q
    |||||||||  |||| |||||||||||||||||||||| |||| ||||||    
T  39928359 gtcaggtagtttagtggttagaattcaccttttttaagatgaaaaaatgg 39928310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 43837411 - 43837448
Alignment:
Q  207 taaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  43837411 taaggtgaataaatggggtgtccagggttcgaaccccg 43837448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 9007785 - 9007832
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaa 239  Q
    |||||||||| ||||| |||||||||||||| ||||| |||||||||||    
T  9007785 tagaattcac-tttttcaaggtgaataaatgagatgttcggggttcgaa 9007832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 14776766 - 14776802
Alignment:
Q  203 tttttaaggtgaataaatgggatgtccggggttcgaa 239  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  14776766 tttttaaggtgaataaattggatgtccgaggttcgaa 14776802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 16182917 - 16182853
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||||||||||  ||||| ||| ||||||| |||| ||||||||||| ||||||| ||||    
T  16182917 tagtggttagaattcatatttttcaagatgaataagtggggtgtccggggtttgaaccccagccc 16182853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 19424130 - 19424094
Alignment:
Q  208 aaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  19424130 aaggtgaataagtggggtgtccggggttcgaaccccg 19424094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 19976559 - 19976603
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||  |||| ||||||||||||||||||||||||    
T  19976559 ttttaaagtgaatatgtggggtgtccggggttcgaaccccggccc 19976603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 24134639 - 24134675
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  24134639 tgaataagtggggtgtccggggttcgaaccccggccc 24134675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 27985072 - 27985016
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||||| |||| |||||||||||||| || ||||||| |  ||||||||||||||||    
T  27985072 tagtagctagatttcaccttttttaaagtaaataaatagagtgtccggggttcgaac 27985016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 29332368 - 29332328
Alignment:
Q  208 aaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||| |||| |||||||||||| |||||||||||    
T  29332368 aaggtgaataagtggggtgtccggggttcaaaccccggccc 29332328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 35619023 - 35619055
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||||||| ||||||||||||||||    
T  35619023 tgaataaatgggatgttcggggttcgaaccccg 35619055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 37491007 - 37490934
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | |||||||||||  || |||| |||||||  ||| |||||| |||||| ||||||||||    
T  37491007 gtcaggtagcctagtggctagaattcacc--ttataagatgaataagcggggtgtccgtggttcgtaccccggccc 37490934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 38021340 - 38021296
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| |||| |||||||||||||||| |||||||    
T  38021340 ttttaaagtgaataagtggggtgtccggggttcgaactccggccc 38021296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 39238804 - 39238760
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| |||| ||||||||||||||||| ||||||    
T  39238804 ttttaaagtgaataagtggggtgtccggggttcgaacctcggccc 39238760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 39433475 - 39433410
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||||| |||||||| | ||||||||||||| |  ||||||||||| |||| |||||| |||||||||    
T  39433475 gtcaggcagcctagtggctagaattcaccttat--aaggtgaataagtggggtgtccgaggttcgaac 39433410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 41182885 - 41182822
Alignment:
Q  180 agcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||| | |||||||||||||||  ||| ||||||| |||| |||||||||||| |||||||    
T  41182885 agcctagtcgctagaattcaccttttcaaag-tgaataagtggggtgtccggggttcaaaccccg 41182822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 42832064 - 42831991
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||| |||||||||   ||||||||||||| |  ||||||||||| |||| ||||||||||| ||||||| ||||    
T  42832064 gtcagatagcctagtgactagaattcaccttat--aaggtgaataagtggggtgtccggggtttgaaccccagccc 42831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 43109253 - 43109289
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||| | ||||||||||||||||||||||||    
T  43109253 tgaataaatgaggtgtccggggttcgaaccccggccc 43109289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 47645778 - 47645818
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtg 213  Q
    ||||||||||||||| | |||||||||||||||| ||||||    
T  47645778 gtcaggtagcctagtggctagaattcacctttttcaaggtg 47645818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 49916520 - 49916488
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||||||||| |||||||||||    
T  49916520 tgaataaatgggatgtccgggattcgaaccccg 49916488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 52765724 - 52765776
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||||||||||| | |||||||| || |||||||||| ||| ||||||    
T  52765724 tagaattcacctttttttaagtgaataagtgagatgtccgggattcaaacccc 52765776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 52961081 - 52961133
Alignment:
Q  196 ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||  || |||||||| ||||  |||||||||||||||||||||||    
T  52961081 ttcaccttttccaacgtgaataagtggggcgtccggggttcgaaccccggccc 52961133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 440518 - 440443
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||| ||| ||||  ||||||||||||||    
T  440518 gtcaggtagcctagtggttagaattcaccttttttaaggtgaataagtggggtgttcgggagtcgaaccccggccc 440443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 14102578 - 14102505
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||||||||||||||||||  || |||||||||||| |||| |||||||||||| |||||||||||    
T  14102578 gtcaggtagcctagtagttagaattcacc--ttataaggtgaataagtggggtgtccggggttcaaaccccggccc 14102505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 14412595 - 14412522
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||||||||||||||||||  || |||||||||||| |||| |||||||||||| |||||||||||    
T  14412595 gtcaggtagcctagtagttagaattcacc--ttataaggtgaataagtggggtgtccggggttcaaaccccggccc 14412522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 23470477 - 23470544
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||| ||||| ||||||| |||||||||| ||| |||||||||||||||||||||||||||||    
T  23470477 gtcaggtagtctagtggttagaactcacctttttcaagatgaataaatgggatgtccggggttcgaac 23470544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 10958147 - 10958082
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||||||||| | ||||||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  10958147 gtagcctagtggctagaattcaccttttttgaggtgaataagtggggtgtccggggttcgaacccc 10958082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 2567811 - 2567883
Alignment:
Q  176 aggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| ||||| |||||||||||||||||| ||||| ||||| |||| || |||||||||||||||||||||    
T  2567811 aggtagtctagtggttagaattcacctttttcaaggttaataagtggggtgaccggggttcgaaccccggccc 2567883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 21285334 - 21285404
Alignment:
Q  176 aggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||| | ||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||    
T  21285334 aggtagcctagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggccc 21285404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 35195944 - 35195887
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||| |||||||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  35195944 tagaagtcacctttttcaaggtgaataaatggggtgttcggggttcgaaccccggccc 35195887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 11808158 - 11808086
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttt-taaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| |||| ||||| |||||||||||| ||||| |||||||||||| |||| ||||||||||||||||||||    
T  11808158 gtcaagtagtctagttgttagaattcacgtttttctaaggtgaataagtggggtgtccggggttcgaaccccg 11808086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 29658250 - 29658323
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||||||||| | ||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||    
T  29658250 gtcaagtagcctagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggccc 29658323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 33202532 - 33202605
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||||||||||| |  ||| ||||||| |||| ||||||||||||||||||||||||    
T  33202532 gtcaggtagcctagtggctagaattcaccttat--aagatgaataagtggggtgtccggggttcgaaccccggccc 33202605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 34948223 - 34948151
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggcc 247  Q
    ||||||||||||||| | ||||||||||||| |  ||||||||||| |||| ||||||||||||||||| |||||    
T  34948223 gtcaggtagcctagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaacctcggcc 34948151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 36315950 - 36316025
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| ||||| |||| |||||||||||| || | |||||||||||| |||| |||||| |||||||||||||||||    
T  36315950 gtcaagtagcttagttgttagaattcactttatataaggtgaataagtggggtgtccgaggttcgaaccccggccc 36316025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 1649265 - 1649196
Alignment:
Q  179 tagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| | ||||||||||| |||| ||||||||||| |||| ||||| |||||||||||| |||||    
T  1649265 tagcctagtggctagaattcaccattttcaaggtgaataagtggggtgtccagggttcgaaccctggccc 1649196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 43635689 - 43635636
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||| ||| |||||||||||| |||| ||||||||||||||||||||    
T  43635689 tagaattcaccctttgtaaggtgaataagtggggtgtccggggttcgaaccccg 43635636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 4169193 - 4169120
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||| |||||| | ||||||||||  ||| |||||||||||| |||| |||||||||||| |||||||||||    
T  4169193 gtcaggtaacctagtggctagaattcac--tttataaggtgaataagtggggtgtccggggttcaaaccccggccc 4169120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 41012560 - 41012632
Alignment:
Q  177 ggtagcctagtagttagaattcacctttt-ttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||  | |||||||||||||||| ||||||||||||| |||||||| |||||||||| | |||||||    
T  41012560 ggtagcctatcaattagaattcacctttttttaaggtgaataagtgggatgttcggggttcgagctccggccc 41012632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 47355929 - 47355853
Alignment:
Q  173 gtcaggtagcctagtagttagaattcacctttttt-aaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| ||||||||||  |||||||||| ||||||| ||  ||||||| ||||||||| |||||||||||||||||||    
T  47355929 gtcaagtagcctagtgattagaattcatctttttttaaaatgaataagtgggatgtctggggttcgaaccccggccc 47355853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 47552330 - 47552257
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||| || | ||||||||||||| |  ||||||||||| | || ||||||||||||||||||||||||    
T  47552330 gtcaggtagcctggtggctagaattcaccttat--aaggtgaataagtagggtgtccggggttcgaaccccggccc 47552257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 44409319 - 44409249
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| ||| |||||| |||||||||||||||||| ||||||||||| |||| ||| | ||||||||||||||    
T  44409319 gtcaagtaacctagtggttagaattcacctttttcaaggtgaataagtggggtgttc-gggttcgaaccccg 44409249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 48007141 - 48007070
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||| ||| ||||| | ||||||||||||||| ||||||||| || |||||||| || |||||||||||||    
T  48007141 gtcagatagtctagtggctagaattcaccttttgtaaggtgaacaagtgggatgttcgaggttcgaaccccg 48007070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 10020445 - 10020515
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||| |||| ||||| | |||||||||||||||| ||| ||||||| |||| ||| |||||||||||||||    
T  10020445 gtcaagtaggctagtgggtagaattcacctttttcaagatgaataagtgggttgttcggggttcgaacccc 10020515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 17997716 - 17997783
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    |||| |||| ||||| | |||||||||||||||  |||||||||||||||| ||||| ||||||||||||    
T  17997716 gtcaagtagtctagtggctagaattcacctttt--aaggtgaataaatggggtgtccagggttcgaaccc 17997783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 26734247 - 26734317
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||| ||||||||| | |||||||||||||||| ||||||||||| |||| ||||  ||||| |||||||    
T  26734247 gtcagatagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtctagggtttgaacccc 26734317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 41000863 - 41000813
Alignment:
Q  189 gttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaa 239  Q
    |||||||||||| ||||||||||||||||| |||||||| |||| ||||||    
T  41000863 gttagaattcacattttttaaggtgaataagtgggatgttcgggattcgaa 41000813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 7162650 - 7162715
Alignment:
Q  179 tagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||||||||||||||||||| ||| ||||||| ||| || | | | ||||||||||||    
T  7162650 tagcctagtagttagaattcacctttttcaagatgaataagtggaatattcagagttcgaaccccg 7162715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 27047725 - 27047766
Alignment:
Q  207 taaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  27047725 taaggtgaataaatggggtgtccgaggttcgaaccccggccc 27047766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 22965936 - 22966009
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||| ||||| ||||||||||||||| |  ||||||||||| |||| |||| |||||||||||| ||||||    
T  22965936 gtcatgtagtctagtggttagaattcaccttat--aaggtgaataagtggggtgtctggggttcgaacctcggccc 22966009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 24579280 - 24579328
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaa 239  Q
    |||||||||||||||| ||||||||||| |||| |||| ||||||||||    
T  24579280 tagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaa 24579328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 28555833 - 28555885
Alignment:
Q  179 tagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccgg 231  Q
    ||||||| ||||||||||| |||||||||||||||||||| |||  |||||||    
T  28555833 tagcctaatagttagaatttaccttttttaaggtgaataagtggagtgtccgg 28555885  T

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Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 38328554 - 38328610
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||| ||||||||| |||||||| |||||||||||||||| |||  |||||||||||    
T  38328554 tagtggttagaattaacctttttcaaggtgaataaatggggtgtttggggttcgaac 38328610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 38451980 - 38451907
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| ||||| | ||||||||||||| |  || |||||||| |||| |||||||| |||||||||||||||    
T  38451980 gtcaggtagtctagtggctagaattcaccttat--aatgtgaataagtggggtgtccgggattcgaaccccggccc 38451907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 42976576 - 42976644
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||| |||| ||||||| ||||||||||||||||||| |||||||| |||  ||||||  |||||||||    
T  42976576 gtcaagtagtctagtaggtagaattcaccttttttaaagtgaataagtggagtgtccgtagttcgaacc 42976644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 3961423 - 3961458
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggcc 247  Q
    ||||||| ||||||||||||||||||||||||||||    
T  3961423 tgaataagtgggatgtccggggttcgaaccccggcc 3961458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 5773242 - 5773180
Alignment:
Q  181 gcctagtagttagaattcaccttttttaaggtgaataaatggga--tgtccggggttcgaacc 241  Q
    ||||||| | |||||| ||||||||| ||||||||||| |||||  |||||||||||||||||    
T  5773242 gcctagtgggtagaatccacctttttcaaggtgaataagtgggatgtgtccggggttcgaacc 5773180  T

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Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 248
Target Start/End: Original strand, 28914885 - 28914928
Alignment:
Q  205 tttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||    
T  28914885 tttaaagtgaataagtggggtgtccggggttcgaaccccggccc 28914928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 28968679 - 28968734
Alignment:
Q  193 gaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||| ||||||||||| || ||||| |||||||| ||||| |||||    
T  28968679 gaattcacctttttcaaggtgaataagtgagatgttcggggttcaaaccctggccc 28968734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 38363277 - 38363230
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatg 221  Q
    |||| ||| ||||| |||||||||||||||||||||| ||||||||||    
T  38363277 tcagatagtctagtggttagaattcaccttttttaagatgaataaatg 38363230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 8725133 - 8725186
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccgg 245  Q
    |||||||||||||| | ||||||||||| |||| ||| |||||||||||||||||    
T  8725133 tagaattcacctttat-aaggtgaataagtggggtgttcggggttcgaaccccgg 8725186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 45198077 - 45198140
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaa 239  Q
    |||||||| ||| | | ||||||||||||| |  |||||||||||||||| |||||||||||||||    
T  45198077 tcaggtagtctaatggctagaattcaccttat--aaggtgaataaatggggtgtccggggttcgaa 45198140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 7732254 - 7732307
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||| | |||||||||||||||| |  |||||||||| |||||||||||    
T  7732254 tagaattcaacgtttttaaggtgaataagttagatgtccgggattcgaaccccg 7732307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 22706006 - 22706072
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    ||||||||||||||||| |||||||||  | || |||||||||||| |||| ||||||| ||| |||||    
T  22706006 gtcaggtagcctagtagctagaattca--tcttataaggtgaataagtggggtgtccggagtttgaacc 22706072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 25711114 - 25711182
Alignment:
Q  179 tagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| | |||||||||| ||| | ||| ||||||| |||| |||||| |||||||||||||||||    
T  25711114 tagcctagtggatagaattcacatttataaag-tgaataagtggggtgtccgaggttcgaaccccggccc 25711182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 35368513 - 35368447
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    ||||| ||||| ||| | ||||||||||||| |  |||||||||||||||| ||||||| |||||||||    
T  35368513 gtcagatagcccagtggctagaattcaccttat--aaggtgaataaatggggtgtccggagttcgaacc 35368447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 48175067 - 48175011
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||||  |||| |||||| |||| |||||||||||||||| |||||||    
T  48175067 tagaattcaccttttc-aaggggaataagtggggtgtccggggttcgaacaccggccc 48175011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 2261462 - 2261535
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||| ||||   ||||||||||||| |  ||||||||||| | || |||||||| |||||||||||||||    
T  2261462 gtcaggtagcatagtgtctagaattcaccttat--aaggtgaataagttgggtgtccgggattcgaaccccggccc 2261535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 17900857 - 17900930
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||||||||| | ||||||||||||| |  |||| |||||| ||||  ||||||||||||| |||||||||    
T  17900857 gtcaagtagcctagtggctagaattcaccttat--aaggagaataagtggggagtccggggttcgagccccggccc 17900930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 24030065 - 24030029
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||| |||| |||||||||||||||||||    
T  24030065 tgaataaatggggtgtctggggttcgaaccccggccc 24030029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 30431924 - 30431988
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||||||||||  ||||| ||||||||||| |||||  ||||| |||||||| |||||||    
T  30431924 tagtggttagaattcatatttttcaaggtgaataagtgggaaatccggtgttcgaactccggccc 30431988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 30644282 - 30644213
Alignment:
Q  177 ggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||| ||||| | ||||||||||||| |  ||||||||||| |||| |||| ||||||||||| |||||||    
T  30644282 ggtagactagtggctagaattcaccttat--aaggtgaataagtggggtgtctggggttcgaacaccggccc 30644213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 35457736 - 35457772
Alignment:
Q  182 cctagtagttagaattcaccttttttaaggtgaataa 218  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  35457736 cctagtagttagaattcactttttttaaagtgaataa 35457772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 40273901 - 40273865
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  40273901 tgaataagtggggtgtccggggttcgaaccccggccc 40273865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 44843808 - 44843740
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||| ||| ||||| |||||||||||||  || |||| |||||||||||| ||||| ||||||||||||||    
T  44843808 gtcagatagtctagtggttagaattcacc--ttataagatgaataaatggggtgtcc-gggttcgaaccccg 44843740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 48258195 - 48258227
Alignment:
Q  208 aaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||||||||||||||| ||||||||||||||||    
T  48258195 aaggtgaataaatggggtgtccggggttcgaac 48258227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 14011020 - 14011089
Alignment:
Q  179 tagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| |||||||||||| ||||||||| ||||||| ||||||||||| ||||||||| |||||||    
T  14011020 tagcctagtggttagaattcacattttttaagatgaataagtgggatgtccgaggttcgaactccggccc 14011089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 220338 - 220407
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    |||| |||| ||||| |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||    
T  220338 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccc 220407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 689493 - 689562
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    |||| |||| ||||| |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||    
T  689493 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccc 689562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 733961 - 734030
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    |||| |||| ||||| |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||    
T  733961 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccc 734030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 857857 - 857926
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    |||| |||| ||||| |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||    
T  857857 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccc 857926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 15042343 - 15042416
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| ||||| |||| ||||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||    
T  15042343 gtcaagtagcgtagtggttagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggccc 15042416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 25470827 - 25470893
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| ||||| | ||||||||||||| || |||||||||||||||| |||||| |||||||||||||    
T  25470827 gtagtctagtggctagaattcaccttcttcaaggtgaataaatggggtgtccgaggttcgaaccccg 25470893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 4604339 - 4604400
Alignment:
Q  183 ctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||| ||||||||||| |||||||||||||||||| |||  ||| ||||||||||||||||    
T  4604339 ctagtggttagaattcatcttttttaaggtgaataagtggagtgttcggggttcgaaccccg 4604400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 4798519 - 4798592
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| ||||| | |||||||||||||    ||||||||||| |||| ||||||||||||||||||||||||    
T  4798519 gtcaggtagtctagtggctagaattcaccttac--aaggtgaataagtggggtgtccggggttcgaaccccggccc 4798592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 14683993 - 14683924
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||| |||||   ||||||||||||| |  ||||||||||| |||||||||||||||||||||||||    
T  14683993 gtcaggtagtctagtgactagaattcaccttat--aaggtgaataagtgggatgtccggggttcgaaccccg 14683924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 25689366 - 25689439
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| ||||||||||||  ||| |||||||| ||| | || ||||||||||||||||| ||||||    
T  25689366 gtcaggtagcctagtggttagaattcac--tttataaggtgattaagtagggtgtccggggttcgaacctcggccc 25689439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 30542880 - 30542812
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||  ||||| ||||||||||||||| |  ||||||||||||||| |||| ||||||||||||||||    
T  30542880 tcaggtattctagtggttagaattcaccttat--aaggtgaataaatggaatgttcggggttcgaaccccg 30542812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 2696650 - 2696577
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| || |||| |||||   |||||| |||||||| |||| ||||||||||||||||||||||||    
T  2696650 gtcaggtagcctagtggtcagaaattcac---ttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 2696577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 2800136 - 2800063
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||| |||||   |||||| |||||||| |||| ||||||||||||||||||||||||    
T  2800136 gtcaggtagcctagtggctagaaattcac---ttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 2800063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 216123 - 216192
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    ||||||||| ||||| ||||| |||||||||||| ||||||||||| || | |||||| | |||||||||    
T  216123 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccc 216192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 692683 - 692752
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    ||||||||| ||||| ||||| |||||||||||| ||||||||||| || | |||||| | |||||||||    
T  692683 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccc 692752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 696892 - 696961
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    ||||||||| ||||| ||||| |||||||||||| ||||||||||| || | |||||| | |||||||||    
T  696892 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccc 696961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 729746 - 729815
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    ||||||||| ||||| ||||| |||||||||||| ||||||||||| || | |||||| | |||||||||    
T  729746 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccc 729815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 853641 - 853710
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    ||||||||| ||||| ||||| |||||||||||| ||||||||||| || | |||||| | |||||||||    
T  853641 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccc 853710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 26773692 - 26773745
Alignment:
Q  187 tagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||||||||||||| ||||||||| ||||||| ||| |||| ||||||||||||    
T  26773692 tagttagaattcacattttttaagatgaataagtggaatgttcggggttcgaac 26773745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 4954974 - 4955034
Alignment:
Q  189 gttagaattcaccttt-tttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||||| ||||| |||||||||| ||||||| | |||||||||| ||||||    
T  4954974 gttagaattcacctttctttaaagtgaataaataggatgtctgaggttcgaaccacggccc 4955034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 5245595 - 5245522
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||| ||||||| | | ||||||||||||| |  ||||||||||||| ||||||||| ||||||||||| |||||    
T  5245595 gtcagatagcctaatggctagaattcaccttat--aaggtgaataaattggatgtccgcggttcgaaccctggccc 5245522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 7649645 - 7649572
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | |||||||||||  || |||||||||||| |||| ||| || |||||||||||| ||||    
T  7649645 gtcaggtagcctagtggctagaattcacc--ttgtaaggtgaataagtggggtgttcgaggttcgaaccccagccc 7649572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 16808342 - 16808406
Alignment:
Q  180 agcctagtagttagaattcacctttt-ttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||||||| |||||||||||| |||| ||||||||||||| |||| |||  ||||||||||||||    
T  16808342 agcctagtggttagaattcacttttttttaaggtgaataagtgggctgtatggggttcgaacccc 16808406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 17987427 - 17987500
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||| |||||| | || |||||||||| |  ||||||||||| |||| |||||||||||||||| |||||||    
T  17987427 gtcaggtatcctagtggctataattcaccttat--aaggtgaataattggggtgtccggggttcgaactccggccc 17987500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 23239241 - 23239172
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||| ||||| |||| |||||||  ||| |||||||||||| |||| |||||||||||| |||||||    
T  23239241 gtcaggtagtctagtggttaaaattcac--tttataaggtgaataagtggggtgtccggggttcaaaccccg 23239172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 36359696 - 36359769
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| ||||| | ||||||||||||| |  ||||||||||| |||| |||||||| ||||||| |||||||    
T  36359696 gtcaggtagtctagtggctagaattcaccttat--aaggtgaataagtggggtgtccgggattcgaactccggccc 36359769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 43468683 - 43468752
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||| ||||||||| | ||||||||||||| |  ||||||||||| |||| ||||||| ||||||||||||    
T  43468683 gtcagatagcctagtggctagaattcaccttat--aaggtgaataagtggggtgtccggagttcgaaccccg 43468752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 1028531 - 1028601
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| |||| ||||| |||| ||||||| ||||||||| ||||||||| |||| |||| |||||||||||||    
T  1028531 gtcaagtagtctagtggttaaaattcac-ttttttaagatgaataaattggatatccgaggttcgaaccccg 1028601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 19925095 - 19925146
Alignment:
Q  193 gaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||||||||||||||||| || | ||| |||| |||||||||||    
T  19925095 gaattcaccttttttaaggtgaataagtgaggtgttcgggattcgaaccccg 19925146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 22426518 - 22426452
Alignment:
Q  173 gtcaggtagcctagtagtta-gaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    ||||||||||||||| |||| ||||||||   |||||| ||||||||||||| |||| ||||||||||||    
T  22426518 gtcaggtagcctagtggttaagaattcac---ttttaaagtgaataaatggggtgtcaggggttcgaacc 22426452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 37524040 - 37523985
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggc 246  Q
    |||||||||||||||| ||||||||||||||   |||  |||||||||||||||||    
T  37524040 tagaattcacctttttaaaggtgaataaatgatgtgtttggggttcgaaccccggc 37523985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 248
Target Start/End: Original strand, 43508456 - 43508499
Alignment:
Q  205 tttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||| |||| |||||||||||| |||||||||||    
T  43508456 tttaaggtgaataagtggggtgtccggggttcaaaccccggccc 43508499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 13106344 - 13106413
Alignment:
Q  173 gtcaggtagcctagtagttagaattcacctttt--ttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||| |||||||||   |||||||||||||||  ||||||||||||||| || ||||||||||| ||||    
T  13106344 gtcagatagcctagtgactagaattcaccttttttttaaggtgaataaattgggtgtccggggtttgaac 13106413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 22438577 - 22438627
Alignment:
Q  190 ttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||||||||||||||||||||||| |||  ||||||| ||| ||||    
T  22438577 ttagaattcaccttttttaaggtgaataagtggagtgtccggagtttgaac 22438627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 22847256 - 22847306
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||||||||||||||||||||||||||| || | |||  ||||||||||||    
T  22847256 tagaattcaccttttttaaggtgaataagtgaggtgtgtggggttcgaacc 22847306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 5184876 - 5184938
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| ||||||||||||||| |  ||||||||||| |||| ||||| ||||||||||||| ||||    
T  5184876 tagtggttagaattcaccttat--aaggtgaataagtggggtgtccagggttcgaaccccagccc 5184938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 7345530 - 7345497
Alignment:
Q  190 ttagaattcaccttttttaaggtgaataaatggg 223  Q
    ||||||||||||||||||||||||||||| ||||    
T  7345530 ttagaattcaccttttttaaggtgaataagtggg 7345497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 10199731 - 10199793
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| ||||||||||||| |  ||||||||||| |||| |||  |||||||||||||||||||    
T  10199731 tagtagctagaattcaccttat--aaggtgaataagtggggtgtttggggttcgaaccccggccc 10199793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 11823047 - 11823006
Alignment:
Q  207 taaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||| |||| |||||||||||| |||||||||||    
T  11823047 taaggtgaataagtggggtgtccggggttcaaaccccggccc 11823006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 14010782 - 14010819
Alignment:
Q  207 taaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  14010782 taaggtgaataagtggggtgtccggggttcgaaccccg 14010819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 17855730 - 17855693
Alignment:
Q  211 gtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  17855730 gtgaataagtggggtgtccggggttcgaaccccggccc 17855693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 28979124 - 28979079
Alignment:
Q  194 aattcaccttttttaaggtgaataaatgggatgtccggggttcgaa 239  Q
    ||||||| ||||||||||||||||| || | |||||||||||||||    
T  28979124 aattcacattttttaaggtgaataagtgaggtgtccggggttcgaa 28979079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 31373437 - 31373371
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    ||||| ||| ||||| | ||||||||||||| |  |||||||||| |||||||||||||| ||||||||    
T  31373437 gtcagctagtctagtggctagaattcaccttat--aaggtgaatatatgggatgtccgggattcgaacc 31373371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 43874955 - 43875021
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||| |||||||||| |||||||||||||  || |||||||||||| |||| |||| || |||||||||    
T  43874955 gtcaagtagcctagttgttagaattcacc--ttataaggtgaataagtggggtgtctggtgttcgaacc 43875021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 1588855 - 1588811
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| |||| |||||| |||||||||||||||||    
T  1588855 ttttaaagtgaataagtggggtgtccgaggttcgaaccccggccc 1588811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 5904389 - 5904421
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||| |||||||||||||||||||||||||    
T  5904389 tgaataagtgggatgtccggggttcgaaccccg 5904421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 7314821 - 7314777
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| |||| ||||||||||||||||| ||||||    
T  7314821 ttttaaagtgaataagtggggtgtccggggttcgaacctcggccc 7314777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 9525074 - 9525001
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||   | ||||||||||||| |  ||||||||||| | || |||| |||||||||||||||||||    
T  9525074 gtcaggtagcctaacggctagaattcaccttat--aaggtgaataagtagggtgtctggggttcgaaccccggccc 9525001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 10201346 - 10201310
Alignment:
Q  208 aaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||||| | ||||||||||||||||||||    
T  10201346 aaggtgaataaatgaggtgtccggggttcgaaccccg 10201310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 14684194 - 14684267
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | || |||||||||| |  ||| ||||||| |||| ||||||  ||||||||||||||||    
T  14684194 gtcaggtagcctagtggctataattcaccttat--aagatgaataagtggggtgtccgaagttcgaaccccggccc 14684267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 18123962 - 18123910
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||||||||||||||| |||||| |||| ||| |  ||||||||||||    
T  18123962 tagaattcaccttttttaaggagaataagtggggtgtacatggttcgaacccc 18123910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 23857301 - 23857374
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||||||||| | |  ||| ||||||| | || |||||| |||||||||||||||||    
T  23857301 gtcaggtagcctagtggctagaattcaccgtat--aagatgaataagtcgggtgtccgaggttcgaaccccggccc 23857374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 24074623 - 24074558
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||||||||| | |||||||||||  || |||||||||||| || | |||||| |||||||||    
T  24074623 gtcaggtagcctagtggctagaattcacc--ttataaggtgaataagtgaggtgtccgaggttcgaac 24074558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 24572845 - 24572901
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggcc 247  Q
    ||||||||| | ||||||||||||||||||| | |||  |||||| |||||||||||    
T  24572845 tagaattcaacatttttaaggtgaataaatgaggtgtatggggtttgaaccccggcc 24572901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 24608461 - 24608534
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||   | ||||||||||||| |  ||||||||||| | || |||| |||||||||||||||||||    
T  24608461 gtcaggtagcctaacggctagaattcaccttat--aaggtgaataagtagggtgtctggggttcgaaccccggccc 24608534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 31129390 - 31129350
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||| |||||||| |||| ||||||||||||||||||||    
T  31129390 ttttaaagtgaataagtggggtgtccggggttcgaaccccg 31129350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 37219590 - 37219554
Alignment:
Q  207 taaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  37219590 taaggtgaataaatggggtgtccggggtttgaacccc 37219554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 248
Target Start/End: Complemental strand, 37708766 - 37708738
Alignment:
Q  220 tgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||||||||||||||||||    
T  37708766 tgggatgtccggggttcgaaccccggccc 37708738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 41125412 - 41125476
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||||||||| | ||||||||||||| |  ||||||||||| ||||||||||||  |||||||    
T  41125412 gtcaggtagcctagt-gctagaattcaccttat--aaggtgaataagtgggatgtccggacttcgaac 41125476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 41454842 - 41454878
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  41454842 tgaataagtggggtgtccggggttcgaaccccggccc 41454878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 37707630 - 37707690
Alignment:
Q  183 ctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||||    
T  37707630 ctagtagttagaattcaccttttttaaagtaaataagttggatgtccggggttcgaacccc 37707690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 40956674 - 40956738
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||||||||||||||||||||| |||||||||| | |||||||||||||||| |||||||    
T  40956674 tagtggttagaattcaccttttttaagctgaataaatgaggtgtccggggttcgaactccggccc 40956738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 45713597 - 45713524
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||||||||||||||||||  || |||||||||||| |||| ||||||| |||||||| |||||||    
T  45713597 gtcaggtagcctagtagttagaattcacc--ttataaggtgaataagtggggtgtccggagttcgaactccggccc 45713524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 46328902 - 46328975
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||    
T  46328902 gtcaggtagcctagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggccc 46328975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 40160849 - 40160779
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||| | |||||||||||||||| ||||||||||| |||| |||||||||||| |||||| ||||    
T  40160849 gtagcctagtggctagaattcacctttttaaaggtgaataagtggggtgtccggggttcaaaccccagccc 40160779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 42832040 - 42832111
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggc 246  Q
    ||||||||||||||| | ||||||||||||| |  |||||||||||||||  ||||||||||||||||||||||    
T  42832040 gtcaggtagcctagtggctagaattcaccttat--aaggtgaataaatggagtgtccggggttcgaaccccggc 42832111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 33206874 - 33206801
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||||||||||| |  ||||||||||| |||| ||||||||||||||||||| ||||    
T  33206874 gtcaggtagcctagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccagccc 33206801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 38176171 - 38176098
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||||||||||| || ||||| |  ||||||||||| |||| |||| |||||||||||||||||||    
T  38176171 gtcaggtagcctagtagttagatttaaccttat--aaggtgaataagtgggctgtctggggttcgaaccccggccc 38176098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 3993683 - 3993758
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||||||||| ||||||||||||| |||| || ||| ||||||||| |||||||||||| |||| ||||||    
T  3993683 gtcaagtagcctagtggttagaattcaccattttcaaagtgcataaatggggtgtccggggttcaaaccgcggccc 3993758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 21248970 - 21249041
Alignment:
Q  177 ggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||| ||||| | |||||||||||||||| ||||||||||| |||| ||| | ||||||||||||||||||    
T  21248970 ggtagtctagtggctagaattcacctttttcaaggtgaataagtggggtgttcagggttcgaaccccggccc 21249041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 22432887 - 22432962
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||||||||||| ||||||| |||||||| || |||||||| |||  ||||||||||| ||||||||||||    
T  22432887 gtcaagtagcctagtagatagaatttacctttttcaaagtgaataagtggagtgtccggggtttgaaccccggccc 22432962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 42270992 - 42271064
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||||| |||||||||||  || |||||||||||| | || ||||||| ||||||||||||||||    
T  42270992 tcaggtagcctagtagctagaattcacc--ttataaggtgaataagtagggtgtccggagttcgaaccccggccc 42271064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 50724484 - 50724416
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||||||||| | ||||||||||  |||||||||||||||| |||| |||||| ||||||||||||    
T  50724484 gtcaggtagcctagtggctagaattcac--tttttaaggtgaataagtggggtgtccgaggttcgaacccc 50724416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 50788364 - 50788432
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||||||||| | ||||||||||  |||||||||||||||| |||| |||||| ||||||||||||    
T  50788364 gtcaggtagcctagtggctagaattcac--tttttaaggtgaataagtggggtgtccgaggttcgaacccc 50788432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 33533322 - 33533252
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||| |||| ||||| |||||||||||| ||||||||||||||||| |||||||||   ||||||||||||    
T  33533322 gtcaagtagtctagttgttagaattcactttttttaaggtgaataagtgggatgtctatggttcgaacccc 33533252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 32080156 - 32080103
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||||||| ||||||||||| |||| ||| ||||||||||||||||    
T  32080156 tagaattcacctttttcaaggtgaataagtggggtgttcggggttcgaaccccg 32080103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 28206516 - 28206581
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||||||||||||| |||||||||||||  || |||||||||||| |||||||||| |||||| ||||    
T  28206516 tcaggtagcctagtggttagaattcacc--ttataaggtgaataagtgggatgtccagggttcaaacc 28206581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 36331704 - 36331773
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||| ||||| | ||||||||||  ||||||| |||||||| |||| ||||||||||||||||||||    
T  36331704 gtcaggtagtctagtggctagaattcac--tttttaaagtgaataagtggggtgtccggggttcgaaccccg 36331773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 36842270 - 36842210
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| |||||||||||| ||||| || |||||||| |||||||| ||||||||||||||||    
T  36842270 tagtggttagaattcacttttttcaaagtgaataagtgggatgtacggggttcgaaccccg 36842210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 54983683 - 54983752
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||  |||| | ||||||||||||| |  |||||||||||||||| ||||||||||||||||||||    
T  54983683 gtcaggtagtttagtggctagaattcaccttat--aaggtgaataaatggggtgtccggggttcgaaccccg 54983752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 3955424 - 3955352
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||  |||| | ||||||||||  ||||||| |||||||| |||| ||||||||||||||||||||||||    
T  3955424 tcaggtagtttagtggctagaattcac--tttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 3955352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 4009994 - 4010057
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttc 236  Q
    |||| |||||||||| ||||||||||| | |||| |||||||||||||||| ||| ||||||||    
T  4009994 gtcaagtagcctagtggttagaattcaacattttcaaggtgaataaatggggtgttcggggttc 4010057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 17262321 - 17262270
Alignment:
Q  190 ttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    ||||||||||||||||| ||||||||||| |||| |||||||| ||||||||    
T  17262321 ttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaacc 17262270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 24537926 - 24537871
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||    
T  24537926 tagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggccc 24537871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 27183659 - 27183732
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||| |||||   |||||| |||||||| |||| ||||||||||||||||||||||||    
T  27183659 gtcaggtagcctagtggctagaaattcac---ttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 27183732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 28951969 - 28951916
Alignment:
Q  189 gttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    |||||||||||| ||||| ||||||||||| |||| ||| ||||||||||||||    
T  28951969 gttagaattcacatttttcaaggtgaataagtggggtgttcggggttcgaaccc 28951916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 30157119 - 30157053
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||| |||||||||| ||||||||||||||| |  ||||||||||| | || |||||||||||||||||    
T  30157119 gtcaagtagcctagtggttagaattcaccttat--aaggtgaataagttgggtgtccggggttcgaacc 30157053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 9625071 - 9625027
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| |||| ||||||||||||||||||||||||    
T  9625071 ttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 9625027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 10959221 - 10959177
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| |||| ||||||||||||||||||||||||    
T  10959221 ttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 10959177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 14417985 - 14417920
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||||||||| |||| | ||||||||||||| |  ||||||||||| |||| ||||||||||||||||    
T  14417985 gtcaggtagcttagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaac 14417920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 23026000 - 23025948
Alignment:
Q  189 gttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    ||||||||||||||||||||| |||||||| |||| |||| ||||||| ||||    
T  23026000 gttagaattcaccttttttaaagtgaataagtggggtgtctggggttcaaacc 23025948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 43566774 - 43566843
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||||| | |||||||||||  || |||||||||||| |||| |||| | |||||||||||||    
T  43566774 gtcaggtagcctagtggctagaattcacc--ttataaggtgaataagtggggtgtctgaggttcgaaccccg 43566843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 43774302 - 43774233
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||| |||||| | ||||||||||||| |  ||||||||||| |||| |||| |||||||||||||||    
T  43774302 gtcaggtaacctagtggctagaattcaccttat--aaggtgaataagtggggtgtctggggttcgaaccccg 43774233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 47497186 - 47497134
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttc 236  Q
    |||| |||| ||||||||||||||||||||||||| |||| |||| |||||||    
T  47497186 tagtggttaaaattcaccttttttaaggtgaataagtggggtgtctggggttc 47497134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 49639145 - 49639072
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||| |||||| | |||||||||||||    ||||||||||| |||| ||| ||||||||||||||||||||    
T  49639145 gtcaggtaacctagtggctagaattcaccttac--aaggtgaataagtggggtgttcggggttcgaaccccggccc 49639072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 793985 - 794059
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| ||||||||| || |||||||||||| ||| || | |||||| |||| ||||||||||||||| ||||||||    
T  793985 gtcaagtagcctagcagctagaattcacctctttcaaagagaataagtggg-tgtccggggttcgaatcccggccc 794059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 2732763 - 2732707
Alignment:
Q  190 ttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||| |  ||||||||||| |||| ||||||||||||||||||| ||||    
T  2732763 ttagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaacccctgccc 2732707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 4478344 - 4478415
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||| ||||| | || |||| || ||||| ||| ||||||| ||||||||||||| |||||||||||    
T  4478344 gtcaggtagtctagtggctaaaatttacatttttaaagatgaataagtgggatgtccgggattcgaaccccg 4478415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 11668248 - 11668318
Alignment:
Q  178 gtagcctagtagttagaattcacctt--ttttaaggtgaataaatgggatgtccggggttcgaaccccggc 246  Q
    |||| ||| |||||| ||||||||||  ||| ||||||||||| |||| |||||| |||||||||||||||    
T  11668248 gtagtctactagttataattcaccttgatttcaaggtgaataagtggggtgtccgtggttcgaaccccggc 11668318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 21142709 - 21142784
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| ||||||||||   ||||||||||||||||||| |||||||| | || | ||||| | ||||||||||||||    
T  21142709 gtcatgtagcctagtgactagaattcaccttttttaaagtgaataagtagggtttccggtgctcgaaccccggccc 21142784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 24130678 - 24130607
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| |||| ||||| | ||| ||||| |||||| ||||||||||| |||| |||||||||||| |||||||    
T  24130678 gtcaagtagtctagtggctagtattcaactttttcaaggtgaataagtggggtgtccggggttcaaaccccg 24130607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 34344756 - 34344816
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggtt 235  Q
    ||||||||||||||| | |||||||||||  || |||||||||||| |||| |||||||||||    
T  34344756 gtcaggtagcctagtggctagaattcacc--ttataaggtgaataagtggggtgtccggggtt 34344816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 13874814 - 13874881
Alignment:
Q  175 caggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||| ||||| | ||||||||||||| |  ||||||||||||||||||||| ||| || ||||||||    
T  13874814 caggtagtctagtggctagaattcaccttat--aaggtgaataaatgggatgtctgggatttgaaccccg 13874881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 19137733 - 19137663
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||   |||||||| | ||||| |||| ||||||||||| |||| |||||||||||| ||||||    
T  19137733 gtagcctagtgactagaattctcttttttcaaggagaataaatggggtgtctggggttcgaacctcggccc 19137663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 24559506 - 24559437
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||| |||||| ||||||| |||||   |||||| |||||||| |||| ||||||||||||||||||||    
T  24559506 gtcaggtaacctagtggttagaaattcac---ttttaaagtgaataagtggggtgtccggggttcgaaccccg 24559437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 6054211 - 6054268
Alignment:
Q  183 ctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||| |||||||||||||||||| ||||||||||| || | ||| ||| ||||||||    
T  6054211 ctagtggttagaattcacctttttcaaggtgaataagtgaggtgttcggagttcgaac 6054268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 16006495 - 16006553
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||| ||||||||||||||| |  ||||||||||| |||| |||| |||||||||||||||    
T  16006495 tagtggttagaattcaccttat--aaggtgaataagtggggtgtctggggttcgaaccccg 16006553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 23237463 - 23237414
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||||||||||||||| || |||||||  |||||||||||| ||||||||    
T  23237463 tagaattcacctttttcaacgtgaatatgtgggatgtccggagttcgaac 23237414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 24160522 - 24160575
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||| |||||| || |||||||| |||  ||||||||||||||||||||    
T  24160522 tagaattcaactttttgaaagtgaataagtggagtgtccggggttcgaaccccg 24160575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 244
Target Start/End: Original strand, 31902211 - 31902252
Alignment:
Q  203 tttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||||||| |||| ||||||| ||||||||||||    
T  31902211 tttttaaggtgaataagtggggtgtccggagttcgaaccccg 31902252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 50144584 - 50144654
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccgg 245  Q
    ||||| ||| ||||| | ||||||||||||| |  ||||||||||| |||  |||||||||||||||||||||    
T  50144584 gtcagatagtctagtgggtagaattcaccttat--aaggtgaataagtggagtgtccggggttcgaaccccgg 50144654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 4045626 - 4045678
Alignment:
Q  189 gttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    |||||||||||||||||| ||| ||||||| |||| ||||||  |||||||||    
T  4045626 gttagaattcacctttttcaagatgaataagtggggtgtccgaagttcgaacc 4045678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 14868773 - 14868729
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| |||| ||| ||||||||||||||||||||    
T  14868773 ttttaaagtgaataagtggggtgttcggggttcgaaccccggccc 14868729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 17439943 - 17440016
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| |||| ||||||||  || |||||||||||| |||| | |||| ||||| ||| |||||||    
T  17439943 gtcaggtagcctagtggttaaaattcacc--ttataaggtgaataagtggggtatccgaggttcaaacaccggccc 17440016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 24136728 - 24136803
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||||||||| | ||||| ||||||||||| ||| ||||||| |||| |||||||||||||| ||| |||||    
T  24136728 gtcaagtagcctagtggctagaaattcacctttttaaag-tgaataagtggggtgtccggggttcgatccctggccc 24136803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 27739890 - 27739817
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| ||||| | |||| |||||||| |  || ||||||||||||| |||||||||||| ||| |||||||    
T  27739890 gtcaggtagactagtggctagagttcaccttat--aatgtgaataaatggggtgtccggggttcaaactccggccc 27739817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 29645842 - 29645878
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  29645842 tgaataagtggggtgtccggggttcgaaccccggccc 29645878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 32508772 - 32508841
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||| | |||| | ||||||||||||| |  ||||||||||| |||| ||| ||||||||||||||||    
T  32508772 gtcaggtaacttagtggctagaattcaccttat--aaggtgaataagtggggtgttcggggttcgaaccccg 32508841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 39492938 - 39492865
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||| |||| |||||||||||||  || ||| || ||||| |||| |||| |||||||||||||| ||||    
T  39492938 gtcaggtagcttagtggttagaattcacc--ttataacgtaaataagtggggtgtctggggttcgaaccccagccc 39492865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 46006410 - 46006450
Alignment:
Q  203 tttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||| ||| ||||||||||||||||| |||||||||||    
T  46006410 tttttaatgtggataaatgggatgtccggagttcgaacccc 46006450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 46989064 - 46989036
Alignment:
Q  194 aattcaccttttttaaggtgaataaatgg 222  Q
    |||||||||||||||||||||||||||||    
T  46989064 aattcaccttttttaaggtgaataaatgg 46989036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 47191490 - 47191425
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||||||||| | ||||||||| ||| |  ||||||||||| |||| ||| ||||||||||||    
T  47191490 gtcaggtagcctagtggctagaattcatcttat--aaggtgaataagtggggtgttcggggttcgaac 47191425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 50271813 - 50271773
Alignment:
Q  208 aaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||| |||||||| ||||||||||||| ||||||    
T  50271813 aaggtgaataagtgggatgtacggggttcgaaccacggccc 50271773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 52030209 - 52030165
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| | || ||||||||||||||||||||||||    
T  52030209 ttttaaagtgaataagtagggtgtccggggttcgaaccccggccc 52030165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 55318122 - 55318070
Alignment:
Q  187 tagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaa 239  Q
    |||||| ||||||| ||||| || |||||||| |||| |||||||||||||||    
T  55318122 tagttaaaattcacttttttcaaagtgaataagtggggtgtccggggttcgaa 55318070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 9491713 - 9491786
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||| ||||||||| ||||||||||| ||| |  ||||||||||| |||| ||||||||||||||||||||||||    
T  9491713 gtcagttagcctagtggttagaattcatcttat--aaggtgaataagtggggtgtccggggttcgaaccccggccc 9491786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 25020506 - 25020579
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||||||||||| |  ||||||||||| |||| |||||||||||||||||| |||||    
T  25020506 gtcaggtagcctagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaacccaggccc 25020579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 19680242 - 19680297
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggc 246  Q
    |||||||||||||||| |||| |||||| |||| ||||||||||||||||||||||    
T  19680242 tagaattcacctttttcaaggagaataagtggggtgtccggggttcgaaccccggc 19680297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 20149955 - 20150026
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtcc-ggggttcgaacccc 243  Q
    |||| |||| ||||||| |||||||||||||||| ||||||||||| |||| ||||| ||||||||||||||    
T  20149955 gtcaagtaggctagtagatagaattcacctttttcaaggtgaataagtggggtgtccaggggttcgaacccc 20150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 22182877 - 22182806
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtcc-ggggttcgaacccc 243  Q
    |||| |||| ||||||| |||||||||||||||| ||||||||||| |||| ||||| ||||||||||||||    
T  22182877 gtcaagtaggctagtagatagaattcacctttttcaaggtgaataagtggggtgtccaggggttcgaacccc 22182806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 1488190 - 1488136
Alignment:
Q  190 ttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||| ||||||||||||||||||||| |||  |||||||||||||||    
T  1488190 ttagaattcaccatttttaaggtgaataaatggggtgtttggggttcgaaccccg 1488136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 17347373 - 17347304
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    ||||||||| ||| | ||||||||| |||||||||||||||||||| |||| |||||  |||||||||||    
T  17347373 gtcaggtagtctaatggttagaatttaccttttttaaggtgaataagtggggtgtccaaggttcgaaccc 17347304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 26669653 - 26669710
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||||| ||||||||||| |||| |||| |||||||||||||| ||||    
T  26669653 tagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccagccc 26669710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 3448469 - 3448396
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||| | | ||||||||||||| |  ||| ||||||| |||| ||||||||||||||||||||||||    
T  3448469 gtcaggtagcctattggctagaattcaccttat--aagatgaataagtggggtgtccggggttcgaaccccggccc 3448396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 12089214 - 12089141
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||| |||||| | ||||||||||||| |  ||||||||||| |||| |||||||||||||||| |||||||    
T  12089214 gtcaggtatcctagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaactccggccc 12089141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 18904661 - 18904734
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||||||||||| |  ||||||||||| |||| ||||| | ||||||||||||||||    
T  18904661 gtcaggtagcctagtggctagaattcaccttat--aaggtgaataagtggggtgtccagagttcgaaccccggccc 18904734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 22983697 - 22983624
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| ||||| |||| ||||||||||||||| |  ||| ||||||| |||| ||||||||||||||||||||||||    
T  22983697 gtcacgtagcatagtggttagaattcaccttat--aagatgaataagtggggtgtccggggttcgaaccccggccc 22983624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 23804711 - 23804784
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| ||||| |||| ||||||||||||||| |  ||| ||||||| |||| ||||||||||||||||||||||||    
T  23804711 gtcacgtagcatagtggttagaattcaccttat--aagatgaataagtggggtgtccggggttcgaaccccggccc 23804784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 9438419 - 9438351
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||| |||||||||| ||||||||||||||| |  ||||||||| | |||| |||||||||||||||||||    
T  9438419 gtcaagtagcctagtggttagaattcaccttat--aaggtgaatgagtggggtgtccggggttcgaacccc 9438351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 30833136 - 30833065
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||||||  | | |||||||| ||||||| |||| |||||| |||| ||||||||||||||||||||    
T  30833136 gtcaggtagccttttggctagaattctcctttttcaaggagaataagtggggtgtccggggttcgaaccccg 30833065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 34675800 - 34675851
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    |||||||||| |||||||| |||||||| |||| ||||||||||||||||||    
T  34675800 tagaattcacattttttaaagtgaataactggggtgtccggggttcgaaccc 34675851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 10455860 - 10455786
Alignment:
Q  175 caggtagcctagtagttagaattcaccttttttaaggtgaataaatggga-tgtccggggttcgaaccccggccc 248  Q
    ||||||| ||||| |||||||||| | ||||| |||| |||||| ||||  ||||||||||||||||||||||||    
T  10455860 caggtagtctagtggttagaattctcttttttcaaggagaataagtgggggtgtccggggttcgaaccccggccc 10455786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 14949001 - 14949067
Alignment:
Q  179 tagcctagtagttagaattcaccttttttaaggtgaataaat-gggatgtccggggttcgaaccccg 244  Q
    ||||||||| | || ||||||||||||| ||||||||||||| ||| ||||||| ||||||||||||    
T  14949001 tagcctagtggctataattcacctttttcaaggtgaataaatgggggtgtccggagttcgaaccccg 14949067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 34883857 - 34883799
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccgg 231  Q
    |||||||| ||||||||||||| || || ||||||||||||||||| |||| |||||||    
T  34883857 gtcaggtaacctagtagttagagttgacattttttaaggtgaataagtggggtgtccgg 34883799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 3243935 - 3243890
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataa 218  Q
    |||||||||  |||| ||||||||||||||||||||||||||||||    
T  3243935 gtcaggtagtttagtggttagaattcaccttttttaaggtgaataa 3243890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 7234066 - 7234009
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||||| ||||||||||| |||| |||||| ||||| |||||| ||||    
T  7234066 tagaattcacctttttcaaggtgaataagtggggtgtccgaggttcaaaccccagccc 7234009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 8176105 - 8176048
Alignment:
Q  184 tagtagttagaattcacctt-ttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||| ||| ||||||||    
T  8176105 tagtagttagaattcacctttttttaaggtgaataagtggggtgttcggagttcgaac 8176048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 24257029 - 24256960
Alignment:
Q  179 tagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| | ||||||| || ||||| ||||||||||| |||| | ||||||||||||||| ||||||    
T  24257029 tagcctagtggctagaatttacttttttcaaggtgaataagtggggtatccggggttcgaacctcggccc 24256960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 31741442 - 31741496
Alignment:
Q  174 tcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccg 230  Q
    |||||||||||| ||||||||||||| ||| |  |||||||||||||||||||||||    
T  31741442 tcaggtagcctaatagttagaattcatcttat--aaggtgaataaatgggatgtccg 31741496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 34524976 - 34524919
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||||  |||||||||| |||| ||| ||||| ||||||||||||||    
T  34524976 tagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggccc 34524919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 6658550 - 6658594
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||    
T  6658550 ttttaaggagaataagtggggtgtccggggttcgaaccccggccc 6658594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 29430297 - 29430349
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||| |||||||| ||||||||||| |||| |||||| ||||||||||||    
T  29430297 tagaatttacctttttaaaggtgaataagtggggtgtccgaggttcgaacccc 29430349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 34396200 - 34396127
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| ||| | ||||||||||||||| |  ||||||||||||| || ||||||| |||||||| |||||||    
T  34396200 gtcaggtagtctattggttagaattcaccttat--aaggtgaataaatagggtgtccggagttcgaactccggccc 34396127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 5134412 - 5134484
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggcc 247  Q
    ||||||||||||||| | |||||||||||  || |||||||||||| |||| |||| | |||||||||| |||||    
T  5134412 gtcaggtagcctagtggctagaattcacc--ttataaggtgaataagtggggtgtctgaggttcgaaccgcggcc 5134484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 6455572 - 6455497
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| ||||||||||   ||||||||| |||||| ||||||||||| | || ||||||| ||||||||||| ||||    
T  6455572 gtcaagtagcctagtgtctagaattcatctttttcaaggtgaataagtagggtgtccggagttcgaaccccagccc 6455497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 15126343 - 15126291
Alignment:
Q  189 gttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||||||||||||| |  |||||||||||||||| ||||||| |||||||||||    
T  15126343 gttagaattcaccttat--aaggtgaataaatggggtgtccggagttcgaacccc 15126291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 29204861 - 29204916
Alignment:
Q  189 gttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||| ||||||||||||||||| |||| ||| ||  ||||||||||||    
T  29204861 gttagaattcactttttttaaggtgaataagtggggtgttcgaagttcgaaccccg 29204916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 3037570 - 3037620
Alignment:
Q  178 gtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtc 228  Q
    ||||| |||| |||||||||||||||||||||| ||||||| |||| ||||    
T  3037570 gtagcttagtggttagaattcaccttttttaagatgaataagtgggttgtc 3037620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 6652326 - 6652259
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    ||||||||||||||| | || |||||||  ||| ||||||||||||||||| |||| || ||||||||||    
T  6652326 gtcaggtagcctagtggctataattcac--tttataaggtgaataaatggggtgtctggagttcgaaccc 6652259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 9422948 - 9422882
Alignment:
Q  178 gtagcctagtagttagaattcacctttttt-aaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    ||||| |||| | ||||||||||||||| | ||||||||||| |||| ||||||| |||||||||||    
T  9422948 gtagcttagtggctagaattcaccttttatcaaggtgaataagtggggtgtccggtgttcgaacccc 9422882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 14981680 - 14981753
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||| |||||   |||||| |||||||| |||| ||||| ||||||||||||||||||    
T  14981680 gtcaggtagcctagtggctagaaattcac---ttttaaagtgaataagtggggtgtccagggttcgaaccccggccc 14981753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 22730695 - 22730745
Alignment:
Q  191 tagaattcacctt-ttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||||||||||| ||||||||||||||| |||| |||||| |||||||||    
T  22730695 tagaattcaccttattttaaggtgaataagtggggtgtccgaggttcgaac 22730745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 6270590 - 6270660
Alignment:
Q  176 aggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||| |||||| | ||||||||||||| |  ||||||||||| |||| ||| | ||||||||||||||||||    
T  6270590 aggtaacctagtggctagaattcaccttat--aaggtgaataattggggtgttcagggttcgaaccccggccc 6270660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 8309266 - 8309217
Alignment:
Q  191 tagaattcacctttttt-aaggtgaataaatgggatgtccggggttcgaa 239  Q
    ||||||||||||||||| ||||||||||  |||| |||||||||||||||    
T  8309266 tagaattcaccttttttcaaggtgaataggtggggtgtccggggttcgaa 8309217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 9051267 - 9051336
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    ||||||| ||||||| | |||||||| ||||||| |||  |||||| || | ||||||||||||||||||    
T  9051267 gtcaggttgcctagtggctagaattctcctttttcaagacgaataagtgagttgtccggggttcgaaccc 9051336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 17123261 - 17123306
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataa 218  Q
    ||||||||| ||| |||||||||||||  |||||||||||||||||    
T  17123261 gtcaggtagtctaatagttagaattcaatttttttaaggtgaataa 17123306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 29284234 - 29284166
Alignment:
Q  174 tcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    |||||||||||||| | ||||| |||||   |||||| |||||||| |||| ||||||||||||||||||||    
T  29284234 tcaggtagcctagtggctagaaattcac---ttttaaagtgaataagtggggtgtccggggttcgaaccccg 29284166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 753290 - 753359
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccg 244  Q
    ||||||||| ||||||| ||||||||| ||| |  |||| |||||| |||| ||||| ||||||||||||||    
T  753290 gtcaggtagtctagtagctagaattcatcttat--aaggggaataagtggggtgtccagggttcgaaccccg 753359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 3030070 - 3030018
Alignment:
Q  189 gttagaattcacctttttt-aaggtgaataaatgggatgtccggggttcgaac 240  Q
    |||||||||||| |||||| ||||||||||| |||| ||||| ||||||||||    
T  3030070 gttagaattcacatttttttaaggtgaataagtggggtgtccagggttcgaac 3030018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 4854321 - 4854357
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  4854321 tgaataagtggggtgtccggggttcgaaccccggccc 4854357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 6228275 - 6228311
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  6228275 tgaataagtggggtgtccggggttcgaaccccggccc 6228311  T

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Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 6530182 - 6530255
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||| ||||| | ||||||||||||| |  ||||||||||| |||| |||||| |||| ||||||||||||    
T  6530182 gtcaagtagtctagtggctagaattcaccttat--aaggtgaataagtggggtgtccgaggtttgaaccccggccc 6530255  T

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Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 16119398 - 16119323
Alignment:
Q  173 gtcaggtagcctagtagttagaattcacctttttt-aaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||| ||||| | |||||||||| |||||| ||||||||||||| || ||| | ||||||||||||||||||    
T  16119398 gtcaagtagtctagtggctagaattcacatttttttaaggtgaataaatagggtgt-cagggttcgaaccccggccc 16119323  T

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Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 18903382 - 18903418
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  18903382 tgaataagtggggtgtccggggttcgaaccccggccc 18903418  T

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Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 24470398 - 24470442
Alignment:
Q  204 ttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||| |||||||| |||||| |||||||||||||| |||||||    
T  24470398 ttttaaagtgaataagtgggatttccggggttcgaactccggccc 24470442  T

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Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 32372563 - 32372511
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggat 225  Q
    |||| ||||| |||| |||| ||||||||||||| ||||||||||| ||||||    
T  32372563 gtcatgtagcatagtggttaaaattcacctttttcaaggtgaataagtgggat 32372511  T

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Target: scaffold0308 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 7193 - 7120
Alignment:
Q  173 gtcaggtagcctagtagttagaa-ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||| | ||||| |||||   |||||| ||||||||||||| ||||||||||||||||||||||||    
T  7193 gtcaggtagcctagtggctagaaattcac---ttttaaagtgaataaatggggtgtccggggttcgaaccccggccc 7120  T

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Target: scaffold0119 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 1140 - 1083
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||||||||| ||||||||||| |||| |||| |||||||||||||| ||||    
T  1140 tagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccagccc 1083  T

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Target: scaffold1603 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1603
Description:

Target: scaffold1603; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 703 - 651
Alignment:
Q  189 gttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacc 241  Q
    ||||||||||||||||||||||||||| |||| ||||||||| | ||||||||    
T  703 gttagaattcaccttttttaaggtgaacaaattggatgtccgtgattcgaacc 651  T

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Target: scaffold0636 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 8809 - 8866
Alignment:
Q  183 ctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaac 240  Q
    ||||| ||||||| ||||| ||||||| ||||||||||||| |||||| |||||||||    
T  8809 ctagtggttagaaatcaccatttttaatgtgaataaatgggctgtccgaggttcgaac 8866  T

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Target: scaffold0219 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 6644 - 6684
Alignment:
Q  208 aaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  6644 aaggtgaataattggggtgtccggggttcgaaccccggccc 6684  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 49937 - 49864
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||| ||||| | ||||||||||||| |  ||| ||||||| |||| ||| ||||||||||||||||||||    
T  49937 gtcaggtagtctagtggctagaattcaccttat--aagttgaataagtggggtgtacggggttcgaaccccggccc 49864  T

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Target: scaffold0039 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 101948 - 101875
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||| |||| ||||| | ||||||||||||| |  ||||||||||| ||||||||  |||||||||||||||||||    
T  101948 gtcacgtagtctagtggctagaattcaccttat--aaggtgaataagtgggatgtttggggttcgaaccccggccc 101875  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 185490 - 185563
Alignment:
Q  173 gtcaggtagcctagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||||||||||||| |||||||||||  || |||| ||||||| ||||||||  ||||||| |||| ||||||    
T  185490 gtcaggtagcctagtagctagaattcacc--ttataagatgaataagtgggatgtttggggttcaaacctcggccc 185563  T

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Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 62821 - 62762
Alignment:
Q  184 tagtagttagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaacccc 243  Q
    |||||| |||||||||| ||||||||| ||||||| |||| ||||||  |||||||||||    
T  62821 tagtagctagaattcactttttttaagatgaataagtgggttgtccgatgttcgaacccc 62762  T

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Target: scaffold0126 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 22849 - 22895
Alignment:
Q  196 ttcaccttttttaaggtgaataaatgggatgtccggggttcgaaccc 242  Q
    ||||| ||||||||||||||||| |||| ||||| ||||||||||||    
T  22849 ttcacattttttaaggtgaataagtggggtgtccagggttcgaaccc 22895  T

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Target: scaffold0054 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 67262 - 67205
Alignment:
Q  191 tagaattcaccttttttaaggtgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    |||||||||| ||||| ||||||| ||| |||| ||||| ||||||||||||| ||||    
T  67262 tagaattcacttttttcaaggtgattaagtggggtgtccagggttcgaaccccagccc 67205  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 419792 - 419756
Alignment:
Q  212 tgaataaatgggatgtccggggttcgaaccccggccc 248  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  419792 tgaataagtggggtgtccggggttcgaaccccggccc 419756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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