View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14919_low_26 (Length: 291)
Name: NF14919_low_26
Description: NF14919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14919_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 23 - 274
Target Start/End: Original strand, 46584119 - 46584361
Alignment:
| Q |
23 |
tttaatattttagtctctacctcagttcatttataaaagatgtttatgttaaaagtctacatgagtttgatatcaaagttcgtaaaataatctttaagca |
122 |
Q |
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| T |
46584119 |
tttaatattttagtctctacctcagttcatttataaaagatgtttatgttaaaagtcta----------atatcaaagctcataaaataatctttaaaca |
46584208 |
T |
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| Q |
123 |
tcaaagagcaccgatatatatgtatttaaatattaaccaccaacaaaatctttacaccaacaacgtgagttaaatcaactcatttgtatataagtcaatt |
222 |
Q |
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| T |
46584209 |
tcaaagagcaccgatatatatgtatttaaatattaaccaccaacaaaatctttacaccaacaacgtgagttaaatcaactcatttgtatataagtcaatt |
46584308 |
T |
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| Q |
223 |
-tttactaattggatccatttttgttaaaagaaagatttgttgagtttgttgt |
274 |
Q |
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| T |
46584309 |
ctttactaattagatccatttttgttaaaagaaatatttgttcagtttgttgt |
46584361 |
T |
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