View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14920_low_10 (Length: 294)
Name: NF14920_low_10
Description: NF14920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14920_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 18 - 290
Target Start/End: Original strand, 104057 - 104329
Alignment:
| Q |
18 |
gtaaagacccaagctaattaggttcttcaggtttccaagctcttttggtattggacccaccaattcattcttgtacaattctctgcaatcaacaatatta |
117 |
Q |
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| T |
104057 |
gtaaagacccaagctaattaggttcttcaggtttccaagctcttttggtattggacccaccaattcattctcgtacaattctctgcaatcaacaatatta |
104156 |
T |
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| Q |
118 |
atcaatttatgtcaaagttcagtaaatataagataagagcttaactaatttgcttacagaaactgaagatggtgaaggttccctagttgaggaaccaaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
104157 |
atcaatttatgtcaaagttcagtaaatataagataagagcttaactaatttgcttacagaaactgaagatggtgaaggttccctagttgaggaaccaaat |
104256 |
T |
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| Q |
218 |
gaccagaaagttttgcatggccacggtctctacaatgcatagatgaggaaccaaattaattaacagtgttgag |
290 |
Q |
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||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
104257 |
gaccagaaagttttgcatgtccaaggtctctacaatgcatagatgaggaaccaaattaattaacagtgttgag |
104329 |
T |
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