View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14920_low_6 (Length: 353)
Name: NF14920_low_6
Description: NF14920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14920_low_6 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 7 - 295
Target Start/End: Complemental strand, 7209839 - 7209551
Alignment:
| Q |
7 |
attatatgcatgaaaagagtgaatcaaagattggtttgttagattcttccttgtgtcaatctctggattattattggtacaaaaacttggtgacacatta |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7209839 |
attatatgcatgaaaagagtgaatcaaagattggtttgttagattctcccttgtgtcaatctctggattattattggtacaaaaacttggtgacacatta |
7209740 |
T |
|
| Q |
107 |
acattaattttagacatagtactagtagtagtactattctggttttggtttgagtaacatcccaaaaaatcttcaagttttggtccttcttcatttgaat |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7209739 |
acattaattttagacatagtactagtagtagtactattctggttttggtttgagtaacatcccaaaaaatcttcaagttttggtccttcttcatttgaat |
7209640 |
T |
|
| Q |
207 |
ttccatcagttattgcattctcatatctccattctgtcacaccaaaaatccatacacagatttaattactaaatcattatcaaattatt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
7209639 |
ttccatcagttattgcattctcatatctccattctgtcacaccaaaaatccatacacaaatttaattactaaatcattatcaaattatt |
7209551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University