View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14922_low_20 (Length: 225)
Name: NF14922_low_20
Description: NF14922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14922_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 45143977 - 45143772
Alignment:
| Q |
1 |
tttgccaagaaaagctgttggtggaggaggtgtatgtgagggttgtggtgatatgagattcttgccttgttttcgatgtaacggaagctgtaagatggtg |
100 |
Q |
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| T |
45143977 |
tttgccaagaaaagctgttggtggaggaggtgtatgtgagggttgtggtgatatgagattcttgccttgttttcgatgtaacggaagctgtaagatggtg |
45143878 |
T |
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| Q |
101 |
aataaacagaaacaggggaacactgttgttgttaagtgtgttgattgtaatgaaaatgggttagttcaatgcccactttgtagttaattagttagctttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||| ||||| |
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| T |
45143877 |
aataaacagaaacaggggaacactgttgttgttaagtgtggtgattgtaatgaaaatgggttagttcagtgcccaatttgtag----ttagttatctttt |
45143782 |
T |
|
| Q |
201 |
attttattat |
210 |
Q |
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|||||||||| |
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| T |
45143781 |
attttattat |
45143772 |
T |
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