View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14923_low_9 (Length: 235)
Name: NF14923_low_9
Description: NF14923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14923_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 28214270 - 28214050
Alignment:
| Q |
2 |
gtaatatggtttgagacaattggaatcaaactcggaatcttgttgtgggatcatttttatgaagattgacgacaagacgaatatttctcttcagatgcct |
101 |
Q |
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| T |
28214270 |
gtaatatggtttgagacaattggaatcaaactcggaatcttgttgtgggatcatttttatgaagattgacgacaagacgaatatttctcctcagatgtct |
28214171 |
T |
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| Q |
102 |
cggccttgctgcttcccatgaaccaaacaatttgacaaagttaaaactaaaacccaaaatctactaaataattaagagaaagattttgctatcaaacaaa |
201 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28214170 |
cggccttgctgcttcccatgaaccagacaatttgacaaagttaaaactaaaacccaaaatctactaaataattaagagaaagattttgctatcaaacaaa |
28214071 |
T |
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| Q |
202 |
aggataagaacaagatgaaat |
222 |
Q |
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||||||||||||||||||||| |
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| T |
28214070 |
aggataagaacaagatgaaat |
28214050 |
T |
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