View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14924_high_7 (Length: 434)
Name: NF14924_high_7
Description: NF14924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14924_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 387; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 1 - 418
Target Start/End: Original strand, 28095152 - 28095572
Alignment:
| Q |
1 |
tattctgagatgtgtttgtctgtgggatgcatctttttatctatttcatgtaaaatgaactctttaatacaaacatagttgaacaatttcaagtttatgt |
100 |
Q |
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| T |
28095152 |
tattctgagatgtgtttgtctgtgggatgcatctttttatctatttcatgtaaaatgaactctttaatacaaacatagttgaacaatttcaagtttatgt |
28095251 |
T |
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| Q |
101 |
tgcttaggcatcaatcaaaggtcctacaaaaaacaatgtatgaggtactaatgactgttttttactcttatggtttgggagctctaagttgatgttgcat |
200 |
Q |
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| T |
28095252 |
tgcttagtcatcaatcaaaggtcctacaaaaaacaatgtatgaggtactaatgacagttttttactcttatggtttgggagctctaagttgatgttgcat |
28095351 |
T |
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| Q |
201 |
agtgacaaatgttttcatgtattggtttcggcatcgtttattaatcgatgatattaactttttctttgggacaaatgaaaaatcaatatttagagttatt |
300 |
Q |
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| T |
28095352 |
agtgacaaatgttttcatgtattggtttcggcatcgtttattaatcgatgatattaactttttctttgggacaaatgaaaaatcaacatttagagttatt |
28095451 |
T |
|
| Q |
301 |
aaaagttgaattgttattccatgagatgaaatcagtgtctttggttgtgaaaggacattggcaatgacaatggtgatagcataggatgttattgctcaga |
400 |
Q |
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| T |
28095452 |
aaaagttgaattgttattccatgagatgaaatcagtgtctttggttgtgaaaggacattggcaatgtcaatggtcatagcataggatgttattgctcaga |
28095551 |
T |
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| Q |
401 |
tacag---tcaacattgatct |
418 |
Q |
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| T |
28095552 |
tacagagttcaacattgatct |
28095572 |
T |
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