View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14924_low_17 (Length: 336)

Name: NF14924_low_17
Description: NF14924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14924_low_17
NF14924_low_17
[»] chr1 (82 HSPs)
chr1 (120-323)||(48480298-48480501)
chr1 (6-121)||(15512810-15512925)
chr1 (6-121)||(28948993-28949108)
chr1 (6-118)||(30898592-30898704)
chr1 (6-121)||(31305277-31305392)
chr1 (6-120)||(13723507-13723621)
chr1 (14-123)||(4813499-4813608)
chr1 (1-90)||(30336049-30336138)
chr1 (6-110)||(15179380-15179484)
chr1 (6-121)||(44335249-44335363)
chr1 (6-87)||(38680468-38680549)
chr1 (6-121)||(8984690-8984805)
chr1 (6-121)||(27531058-27531173)
chr1 (6-92)||(2342892-2342978)
chr1 (6-87)||(48721897-48721978)
chr1 (21-121)||(23982636-23982736)
chr1 (6-90)||(32047432-32047516)
chr1 (6-90)||(33231830-33231914)
chr1 (6-121)||(47643502-47643614)
chr1 (6-121)||(51996913-51997029)
chr1 (21-121)||(52141219-52141321)
chr1 (11-85)||(16582528-16582602)
chr1 (6-120)||(50692369-50692483)
chr1 (15-80)||(15911590-15911655)
chr1 (6-91)||(20564764-20564849)
chr1 (12-85)||(32152153-32152226)
chr1 (6-90)||(3143393-3143477)
chr1 (6-90)||(5085118-5085202)
chr1 (6-85)||(25258325-25258404)
chr1 (6-85)||(25269372-25269451)
chr1 (14-121)||(31808009-31808115)
chr1 (14-80)||(28723690-28723756)
chr1 (6-84)||(44395531-44395609)
chr1 (6-91)||(32144300-32144385)
chr1 (6-91)||(41737114-41737199)
chr1 (14-121)||(10842288-10842393)
chr1 (6-90)||(29140683-29140767)
chr1 (6-86)||(47754671-47754751)
chr1 (6-85)||(6282469-6282548)
chr1 (6-85)||(34696912-34696991)
chr1 (6-91)||(35366013-35366098)
chr1 (7-119)||(46495270-46495382)
chr1 (12-72)||(3072147-3072207)
chr1 (6-86)||(44163226-44163306)
chr1 (7-85)||(9675697-9675775)
chr1 (27-85)||(28334265-28334323)
chr1 (6-60)||(47070990-47071044)
chr1 (12-85)||(28679856-28679928)
chr1 (6-83)||(40261592-40261669)
chr1 (11-121)||(43189062-43189174)
chr1 (16-76)||(13698592-13698652)
chr1 (6-85)||(47133468-47133548)
chr1 (11-82)||(13352832-13352903)
chr1 (6-95)||(23393542-23393629)
chr1 (6-85)||(3143765-3143842)
chr1 (6-90)||(3831039-3831121)
chr1 (6-90)||(8877762-8877846)
chr1 (6-84)||(44652890-44652965)
chr1 (6-85)||(35001299-35001378)
chr1 (1-72)||(46591110-46591181)
chr1 (12-90)||(5322058-5322136)
chr1 (7-85)||(9684748-9684826)
chr1 (40-90)||(10160709-10160759)
chr1 (3-69)||(34031384-34031450)
chr1 (7-85)||(36084965-36085043)
chr1 (6-91)||(15457844-15457929)
chr1 (3-72)||(22786758-22786827)
chr1 (6-67)||(34012070-34012131)
chr1 (12-57)||(40702441-40702486)
chr1 (6-92)||(4817935-4818019)
chr1 (6-92)||(4829735-4829819)
chr1 (42-121)||(12845051-12845130)
chr1 (6-77)||(25063213-25063284)
chr1 (22-85)||(29302494-29302557)
chr1 (27-121)||(51390584-51390679)
chr1 (21-91)||(37733937-37734007)
chr1 (14-75)||(4081931-4081992)
chr1 (21-86)||(34102330-34102395)
chr1 (6-63)||(40205614-40205671)
chr1 (11-72)||(47489902-47489963)
chr1 (6-46)||(291664-291704)
chr1 (14-121)||(16395585-16395693)
[»] chr5 (51 HSPs)
chr5 (6-121)||(39690515-39690630)
chr5 (6-117)||(27642467-27642577)
chr5 (6-121)||(21912081-21912195)
chr5 (6-121)||(27587798-27587913)
chr5 (6-110)||(30348106-30348210)
chr5 (6-121)||(38972156-38972270)
chr5 (6-90)||(4857523-4857611)
chr5 (20-107)||(43060553-43060640)
chr5 (6-86)||(3559056-3559136)
chr5 (6-121)||(15898492-15898606)
chr5 (6-85)||(21574909-21574988)
chr5 (6-121)||(16144-16258)
chr5 (6-85)||(29866185-29866264)
chr5 (14-85)||(35569042-35569113)
chr5 (6-85)||(36177288-36177367)
chr5 (21-87)||(14044542-14044608)
chr5 (12-121)||(10523309-10523417)
chr5 (16-121)||(18729548-18729653)
chr5 (6-90)||(3247303-3247387)
chr5 (18-85)||(11980712-11980779)
chr5 (6-121)||(32067788-32067903)
chr5 (6-90)||(20946078-20946162)
chr5 (14-90)||(34877657-34877733)
chr5 (6-85)||(4738626-4738705)
chr5 (6-85)||(25017703-25017782)
chr5 (14-107)||(10656566-10656657)
chr5 (23-121)||(25690735-25690833)
chr5 (7-85)||(33583809-33583887)
chr5 (6-84)||(41521185-41521263)
chr5 (20-85)||(7510602-7510667)
chr5 (14-87)||(15967149-15967222)
chr5 (7-86)||(33862845-33862925)
chr5 (6-77)||(600769-600840)
chr5 (6-92)||(4745115-4745202)
chr5 (45-91)||(4378132-4378178)
chr5 (6-59)||(29874200-29874253)
chr5 (14-90)||(10933997-10934073)
chr5 (6-121)||(12895238-12895355)
chr5 (6-84)||(16496434-16496511)
chr5 (7-67)||(129624-129684)
chr5 (21-85)||(16969370-16969434)
chr5 (40-92)||(20976353-20976405)
chr5 (21-85)||(27798152-27798216)
chr5 (6-85)||(9946387-9946466)
chr5 (6-85)||(31642498-31642576)
chr5 (57-107)||(34676125-34676175)
chr5 (6-93)||(457758-457846)
chr5 (6-90)||(5845167-5845251)
chr5 (65-121)||(27925337-27925393)
chr5 (6-85)||(36750805-36750882)
chr5 (21-77)||(43453986-43454042)
[»] chr6 (35 HSPs)
chr6 (6-121)||(19838891-19839006)
chr6 (6-103)||(1763791-1763888)
chr6 (11-123)||(22410879-22410990)
chr6 (20-121)||(28238359-28238460)
chr6 (11-122)||(15981753-15981864)
chr6 (6-92)||(31945943-31946029)
chr6 (6-85)||(11302851-11302930)
chr6 (11-121)||(3887979-3888088)
chr6 (7-85)||(5895727-5895805)
chr6 (6-86)||(3729384-3729464)
chr6 (6-122)||(16327082-16327198)
chr6 (6-85)||(12514616-12514695)
chr6 (7-85)||(4250690-4250768)
chr6 (21-123)||(9428125-9428227)
chr6 (6-122)||(16350480-16350596)
chr6 (6-115)||(31780090-31780199)
chr6 (6-121)||(6791338-6791451)
chr6 (6-94)||(10669305-10669393)
chr6 (21-85)||(31536008-31536072)
chr6 (14-85)||(9461289-9461360)
chr6 (6-85)||(11081892-11081971)
chr6 (6-84)||(5084568-5084650)
chr6 (13-82)||(30248563-30248631)
chr6 (21-91)||(31487407-31487477)
chr6 (6-82)||(197482-197558)
chr6 (31-122)||(3307965-3308056)
chr6 (10-85)||(16186569-16186643)
chr6 (14-87)||(30466007-30466080)
chr6 (14-85)||(10260626-10260698)
chr6 (6-86)||(34513249-34513329)
chr6 (32-86)||(5604534-5604588)
chr6 (12-50)||(31153025-31153063)
chr6 (25-66)||(11082112-11082153)
chr6 (6-91)||(33607345-33607430)
chr6 (21-85)||(8644842-8644906)
[»] chr8 (64 HSPs)
chr8 (6-121)||(24962396-24962510)
chr8 (14-121)||(43980622-43980727)
chr8 (6-121)||(26878759-26878874)
chr8 (6-121)||(31746436-31746551)
chr8 (6-121)||(16644067-16644182)
chr8 (6-121)||(24276588-24276701)
chr8 (6-123)||(36437459-36437576)
chr8 (6-121)||(12998724-12998839)
chr8 (6-85)||(14577683-14577762)
chr8 (10-92)||(22590364-22590446)
chr8 (6-90)||(25198280-25198364)
chr8 (6-106)||(40602072-40602172)
chr8 (6-86)||(43191508-43191588)
chr8 (6-85)||(37956117-37956196)
chr8 (6-92)||(2562761-2562847)
chr8 (6-91)||(7172209-7172294)
chr8 (12-121)||(14522641-14522750)
chr8 (6-121)||(40517703-40517815)
chr8 (6-123)||(45203717-45203833)
chr8 (14-82)||(3006820-3006888)
chr8 (6-90)||(25185021-25185105)
chr8 (7-86)||(57220-57299)
chr8 (6-121)||(14906562-14906676)
chr8 (6-85)||(38770218-38770297)
chr8 (7-85)||(7772508-7772586)
chr8 (6-95)||(885448-885536)
chr8 (10-91)||(5191584-5191664)
chr8 (6-67)||(12762856-12762917)
chr8 (21-85)||(25888591-25888655)
chr8 (6-90)||(37141717-37141801)
chr8 (22-85)||(4273955-4274018)
chr8 (6-85)||(24512198-24512277)
chr8 (6-121)||(40790749-40790863)
chr8 (6-85)||(45185298-45185377)
chr8 (18-121)||(45283825-45283927)
chr8 (6-87)||(31673591-31673671)
chr8 (21-86)||(34882665-34882730)
chr8 (21-86)||(43182528-43182593)
chr8 (6-86)||(27560-27640)
chr8 (6-77)||(14739433-14739504)
chr8 (6-85)||(16002754-16002833)
chr8 (6-85)||(38203023-38203102)
chr8 (6-85)||(38761389-38761468)
chr8 (6-85)||(40337222-40337301)
chr8 (6-72)||(30262569-30262635)
chr8 (6-84)||(41086971-41087049)
chr8 (6-104)||(44255431-44255528)
chr8 (6-47)||(34157951-34157992)
chr8 (6-79)||(45183892-45183965)
chr8 (6-86)||(14846952-14847032)
chr8 (6-85)||(38773379-38773459)
chr8 (11-86)||(1177192-1177266)
chr8 (6-85)||(3113564-3113643)
chr8 (6-84)||(36309627-36309703)
chr8 (57-123)||(30262633-30262699)
chr8 (11-57)||(35709135-35709181)
chr8 (6-86)||(17933699-17933780)
chr8 (15-84)||(31252695-31252763)
chr8 (24-85)||(37600937-37600998)
chr8 (21-90)||(39543709-39543778)
chr8 (7-80)||(41541550-41541623)
chr8 (6-85)||(10396261-10396338)
chr8 (41-91)||(15702248-15702298)
chr8 (18-83)||(7727391-7727456)
[»] chr2 (69 HSPs)
chr2 (6-121)||(17663584-17663699)
chr2 (6-121)||(20361946-20362058)
chr2 (8-121)||(3645283-3645396)
chr2 (6-104)||(26512048-26512146)
chr2 (6-122)||(44424554-44424670)
chr2 (6-123)||(43709876-43709994)
chr2 (22-122)||(45214684-45214784)
chr2 (6-121)||(247620-247735)
chr2 (6-121)||(14420637-14420752)
chr2 (6-121)||(27297537-27297652)
chr2 (11-110)||(40346116-40346215)
chr2 (6-121)||(44421409-44421524)
chr2 (3-73)||(11071676-11071746)
chr2 (6-103)||(4033559-4033656)
chr2 (6-91)||(11459143-11459228)
chr2 (8-121)||(41865676-41865789)
chr2 (6-86)||(4398554-4398633)
chr2 (6-85)||(15851527-15851606)
chr2 (6-85)||(37355032-37355111)
chr2 (6-91)||(28264981-28265066)
chr2 (7-91)||(13477064-13477148)
chr2 (6-85)||(17250991-17251070)
chr2 (13-92)||(27749501-27749580)
chr2 (11-86)||(35178828-35178903)
chr2 (6-123)||(8065102-8065219)
chr2 (6-91)||(21012843-21012928)
chr2 (6-91)||(43650024-43650109)
chr2 (14-90)||(9718210-9718286)
chr2 (6-86)||(24774860-24774940)
chr2 (21-121)||(38449759-38449859)
chr2 (6-86)||(41665705-41665785)
chr2 (6-82)||(45150766-45150842)
chr2 (6-85)||(34329998-34330077)
chr2 (25-92)||(42250925-42250992)
chr2 (6-85)||(44274697-44274776)
chr2 (14-85)||(2131753-2131824)
chr2 (35-86)||(2395797-2395848)
chr2 (6-85)||(8384002-8384081)
chr2 (26-84)||(2048878-2048936)
chr2 (6-59)||(35453763-35453816)
chr2 (6-57)||(2521330-2521381)
chr2 (35-86)||(2917156-2917207)
chr2 (6-85)||(31644472-31644551)
chr2 (6-85)||(3237717-3237798)
chr2 (6-91)||(28190588-28190673)
chr2 (12-72)||(12121891-12121951)
chr2 (24-84)||(13534411-13534471)
chr2 (6-85)||(28733821-28733898)
chr2 (22-86)||(32677470-32677534)
chr2 (6-85)||(1246443-1246522)
chr2 (20-86)||(14527619-14527684)
chr2 (6-68)||(16808853-16808915)
chr2 (6-68)||(16848134-16848196)
chr2 (19-92)||(20426929-20427003)
chr2 (11-85)||(36174827-36174901)
chr2 (6-67)||(375375-375436)
chr2 (21-86)||(920701-920766)
chr2 (20-121)||(34042100-34042200)
chr2 (6-90)||(3326715-3326799)
chr2 (7-91)||(6597846-6597930)
chr2 (21-84)||(11168666-11168729)
chr2 (14-72)||(22590426-22590484)
chr2 (6-71)||(1604344-1604409)
chr2 (46-103)||(7278683-7278740)
chr2 (35-92)||(8667627-8667684)
chr2 (21-90)||(35241753-35241822)
chr2 (6-50)||(4758057-4758101)
chr2 (26-85)||(6275617-6275677)
chr2 (33-85)||(32860453-32860505)
[»] chr4 (68 HSPs)
chr4 (6-121)||(12624656-12624771)
chr4 (6-121)||(31486447-31486563)
chr4 (14-121)||(20291300-20291407)
chr4 (6-90)||(25477216-25477300)
chr4 (7-110)||(30153253-30153356)
chr4 (11-121)||(26203090-26203200)
chr4 (6-87)||(14602685-14602766)
chr4 (22-107)||(28116551-28116636)
chr4 (6-91)||(37175052-37175136)
chr4 (1-121)||(13096567-13096686)
chr4 (6-94)||(38136342-38136430)
chr4 (12-110)||(5416905-5417001)
chr4 (6-92)||(29584883-29584969)
chr4 (14-103)||(52198766-52198855)
chr4 (6-121)||(7002142-7002258)
chr4 (6-121)||(22750872-22750987)
chr4 (6-85)||(50782774-50782853)
chr4 (12-90)||(20262430-20262508)
chr4 (6-91)||(34543692-34543777)
chr4 (6-86)||(3094177-3094257)
chr4 (14-86)||(37625163-37625235)
chr4 (14-85)||(19654424-19654495)
chr4 (6-85)||(39237619-39237698)
chr4 (6-85)||(41920068-41920147)
chr4 (6-85)||(56373374-56373453)
chr4 (13-122)||(20185693-20185803)
chr4 (6-92)||(22651453-22651539)
chr4 (6-86)||(10602236-10602317)
chr4 (6-106)||(33246527-33246626)
chr4 (9-85)||(46729302-46729377)
chr4 (7-85)||(48472526-48472605)
chr4 (14-100)||(3684226-3684312)
chr4 (3-85)||(24072763-24072845)
chr4 (15-85)||(51787767-51787837)
chr4 (14-85)||(16070427-16070498)
chr4 (6-85)||(41945803-41945881)
chr4 (6-85)||(52226015-52226094)
chr4 (6-121)||(20293703-20293822)
chr4 (57-121)||(722352-722416)
chr4 (57-121)||(754502-754565)
chr4 (6-90)||(5448653-5448737)
chr4 (6-86)||(5932882-5932961)
chr4 (21-121)||(39414196-39414296)
chr4 (6-121)||(5167940-5168054)
chr4 (14-85)||(5536493-5536564)
chr4 (20-79)||(20791929-20791988)
chr4 (7-85)||(45628105-45628184)
chr4 (16-87)||(52977551-52977621)
chr4 (6-84)||(52552541-52552619)
chr4 (7-85)||(54438506-54438584)
chr4 (35-92)||(30049420-30049477)
chr4 (6-85)||(31840094-31840171)
chr4 (21-85)||(45079856-45079920)
chr4 (6-69)||(31937422-31937485)
chr4 (24-75)||(54359690-54359741)
chr4 (6-84)||(10541287-10541365)
chr4 (6-86)||(20016520-20016598)
chr4 (6-86)||(43509078-43509156)
chr4 (6-77)||(18683563-18683634)
chr4 (6-57)||(43800832-43800883)
chr4 (55-90)||(56217102-56217137)
chr4 (21-106)||(28175783-28175869)
chr4 (12-82)||(31294155-31294225)
chr4 (31-85)||(50438892-50438946)
chr4 (12-85)||(23928329-23928401)
chr4 (21-90)||(32236822-32236891)
chr4 (43-108)||(32866477-32866542)
chr4 (6-86)||(26186785-26186865)
[»] chr7 (55 HSPs)
chr7 (6-121)||(23875997-23876112)
chr7 (6-121)||(20123410-20123525)
chr7 (6-121)||(31373728-31373843)
chr7 (6-117)||(37491649-37491760)
chr7 (6-123)||(21388200-21388317)
chr7 (14-91)||(26632836-26632913)
chr7 (6-123)||(2276607-2276724)
chr7 (6-85)||(18122072-18122151)
chr7 (6-85)||(27213483-27213562)
chr7 (6-121)||(48193575-48193690)
chr7 (6-87)||(6376163-6376244)
chr7 (6-87)||(10685079-10685160)
chr7 (14-123)||(40740909-40741017)
chr7 (13-121)||(29636077-29636185)
chr7 (6-90)||(48767555-48767639)
chr7 (6-121)||(19236097-19236211)
chr7 (14-121)||(20124148-20124255)
chr7 (6-85)||(21809677-21809756)
chr7 (6-85)||(46783871-46783950)
chr7 (6-94)||(25750355-25750443)
chr7 (14-85)||(4089538-4089609)
chr7 (11-86)||(21801091-21801166)
chr7 (6-85)||(36116317-36116396)
chr7 (6-86)||(37048030-37048110)
chr7 (6-90)||(49100662-49100746)
chr7 (6-85)||(37673733-37673812)
chr7 (21-94)||(21753431-21753502)
chr7 (6-123)||(1324666-1324783)
chr7 (21-121)||(28663716-28663815)
chr7 (6-90)||(36726203-36726287)
chr7 (6-90)||(48610166-48610250)
chr7 (21-118)||(26201013-26201111)
chr7 (11-85)||(40211312-40211386)
chr7 (6-71)||(41672597-41672662)
chr7 (21-86)||(42993233-42993298)
chr7 (6-85)||(35128382-35128459)
chr7 (14-77)||(29992979-29993042)
chr7 (14-85)||(35960374-35960445)
chr7 (6-85)||(40263707-40263786)
chr7 (25-91)||(10595146-10595212)
chr7 (12-86)||(19477452-19477525)
chr7 (14-92)||(21752517-21752595)
chr7 (6-91)||(33181285-33181370)
chr7 (6-85)||(27162934-27163011)
chr7 (12-85)||(27170008-27170080)
chr7 (11-85)||(42983649-42983725)
chr7 (19-79)||(36195393-36195453)
chr7 (6-82)||(43601195-43601270)
chr7 (14-121)||(21392931-21393038)
chr7 (13-63)||(17772530-17772580)
chr7 (31-121)||(25098963-25099053)
chr7 (14-72)||(25828130-25828188)
chr7 (6-71)||(10408598-10408663)
chr7 (46-91)||(34118098-34118143)
chr7 (20-72)||(5334439-5334491)
[»] scaffold1091 (1 HSPs)
scaffold1091 (6-121)||(1943-2058)
[»] chr3 (68 HSPs)
chr3 (6-121)||(46435762-46435877)
chr3 (6-121)||(20945332-20945447)
chr3 (6-104)||(52325535-52325633)
chr3 (6-110)||(31531457-31531561)
chr3 (12-91)||(14645927-14646006)
chr3 (7-109)||(26517248-26517350)
chr3 (12-121)||(11388080-11388189)
chr3 (1-121)||(44338041-44338160)
chr3 (6-121)||(25750486-25750601)
chr3 (6-85)||(51263077-51263156)
chr3 (6-87)||(33287859-33287940)
chr3 (6-87)||(46048515-46048596)
chr3 (6-103)||(50363004-50363101)
chr3 (6-90)||(30476031-30476115)
chr3 (21-121)||(42010827-42010927)
chr3 (6-85)||(27638109-27638188)
chr3 (11-90)||(29676776-29676855)
chr3 (6-85)||(31819401-31819480)
chr3 (7-90)||(41727271-41727354)
chr3 (14-121)||(41825177-41825283)
chr3 (6-121)||(42891378-42891493)
chr3 (6-104)||(26121308-26121406)
chr3 (14-91)||(11344547-11344624)
chr3 (6-123)||(26042976-26043093)
chr3 (6-90)||(12077775-12077859)
chr3 (6-86)||(29645352-29645432)
chr3 (6-84)||(27047210-27047288)
chr3 (6-90)||(40645664-40645748)
chr3 (11-86)||(11393916-11393991)
chr3 (11-106)||(31650702-31650797)
chr3 (14-121)||(22659537-22659646)
chr3 (21-86)||(37729076-37729141)
chr3 (14-86)||(13084398-13084470)
chr3 (6-121)||(41740005-41740121)
chr3 (6-90)||(43187125-43187209)
chr3 (6-82)||(48901549-48901625)
chr3 (6-82)||(48903115-48903191)
chr3 (6-85)||(26998890-26998969)
chr3 (3-86)||(35055781-35055863)
chr3 (11-86)||(41543644-41543719)
chr3 (6-121)||(50525008-50525123)
chr3 (8-122)||(35765680-35765796)
chr3 (20-85)||(41308822-41308887)
chr3 (21-94)||(48581304-48581377)
chr3 (12-72)||(33412011-33412071)
chr3 (6-82)||(48309443-48309518)
chr3 (6-86)||(54425988-54426068)
chr3 (6-69)||(39617282-39617345)
chr3 (6-121)||(28477336-28477459)
chr3 (6-91)||(831392-831477)
chr3 (11-121)||(21864254-21864367)
chr3 (23-92)||(23157083-23157152)
chr3 (14-86)||(44083620-44083693)
chr3 (21-69)||(29611845-29611893)
chr3 (6-85)||(2421080-2421158)
chr3 (11-90)||(34055899-34055978)
chr3 (7-90)||(50092658-50092741)
chr3 (14-85)||(54555964-54556035)
chr3 (40-85)||(35145235-35145280)
chr3 (22-121)||(6902614-6902713)
chr3 (6-50)||(21932956-21933000)
chr3 (42-121)||(28228138-28228217)
chr3 (81-121)||(33412097-33412137)
chr3 (6-85)||(11140700-11140779)
chr3 (27-82)||(23068032-23068086)
chr3 (20-86)||(48213619-48213685)
chr3 (35-85)||(49000447-49000497)
chr3 (44-84)||(5504612-5504652)
[»] scaffold0038 (1 HSPs)
scaffold0038 (20-121)||(38521-38622)
[»] scaffold0005 (1 HSPs)
scaffold0005 (6-87)||(214612-214693)
[»] scaffold0013 (1 HSPs)
scaffold0013 (6-121)||(49096-49211)
[»] scaffold0012 (1 HSPs)
scaffold0012 (6-91)||(99847-99932)
[»] scaffold0176 (1 HSPs)
scaffold0176 (6-121)||(19492-19605)
[»] scaffold0699 (1 HSPs)
scaffold0699 (6-82)||(7577-7652)
[»] scaffold0182 (1 HSPs)
scaffold0182 (1-75)||(18695-18769)


Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 120 - 323
Target Start/End: Complemental strand, 48480501 - 48480298
Alignment:
Q  120 tagtgtctaacaaaatttcagctttgagattaatcacatagctcagacattaatagtgaaagtaatatagaaaaaattaactttgtgatctaaataaaac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48480501 tagtgtctaacaaaatttcagctttgagattaatcacatagctcagacattaatagtgaaagtaatatagaaaaaattaactttgtgatctaaataaaac 48480402  T
Q  220 gtatatttaactctaaatagtattcatttggttacatgttttcatacgtcccaacatcctcttgcttgcgatgataattgtgaagttacaaattatggaa 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  48480401 gtatatttaactctaaatagtattcatttggttacatgttttcatacgtcccaacatcctcttgcttgcgatgataattgcgaagttacaaattatggaa 48480302  T
Q  320 gtga 323  Q
    ||||    
T  48480301 gtga 48480298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 15512810 - 15512925
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  15512810 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaaggggggttacatat 15512909  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  15512910 agggacggagggagta 15512925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 28948993 - 28949108
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  28948993 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaaggggggttacatat 28949092  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  28949093 agggacggagggagta 28949108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 30898592 - 30898704
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||||| |||||| |||| ||||||||||||||||||||||||||||  ||| |||||||     
T  30898592 caaaggataatttggtaatattaacacataaaacagacacattaattacactgacaatttttcttaagaaatgtgaaaaaagcaaaaggagtttacatac 30898691  T
Q  106 agggatggaggga 118  Q
    ||||| |||||||    
T  30898692 agggacggaggga 30898704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 31305392 - 31305277
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||| ||||||||| || | |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||  | | ||||||||    
T  31305392 caaaggacaatttggtaatattagcatacaaaatagacacattaattacaccaacaacttttcttaataaatgtgaaaaaagcaaaaggggtttacatat 31305293  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  31305292 agggacggagggagta 31305277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 120
Target Start/End: Original strand, 13723507 - 13723621
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||| ||||| |||||||||| ||| |||||||||||||||| | |||||||||||||||||||||||||||||||| |||||| | | |||||||     
T  13723507 caaaggataatttggtaatattaatacacaaaatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaatgcaaagggtgcttacataa 13723606  T
Q  106 agggatggagggagt 120  Q
    || ||||||||||||    
T  13723607 agagatggagggagt 13723621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 4813499 - 4813608
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatgg 113  Q
    ||||| |||||||||||||| |||||||||||||||| | || |||||||||||||||||||||||||||||||||||  | ||||| ||||||||| |     
T  4813499 aatttggtaatattaacacacaaaatagacacattaattgcattaacaacttttcttaagaaatgtgaaaaaagcaaaagggggttatatatagggacga 4813598  T
Q  114 agggagtagt 123  Q
    ||||||||||    
T  4813599 agggagtagt 4813608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 30336138 - 30336049
Alignment:
Q  1 agaagcaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| ||||||||||||| |||||||||||||| |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  30336138 agaaacaaaggacaatttggtaatattaacacacaaaatagacacattaattacaccgacaacttttcttaagaaatgtgaaaaaagcaa 30336049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 15179484 - 15179380
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||| |||||||| || ||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||  | | ||||||||    
T  15179484 caaaggacaattttgtaatatttacgcataaaatagacacattaattacactgacaatttttcttaagaaatgtgaaaaaagcaaatggggtttacatat 15179385  T
Q  106 aggga 110  Q
    |||||    
T  15179384 aggga 15179380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 44335363 - 44335249
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||| |||||| ||||||||| |||||||||||||||||| ||||| | | ||||||||    
T  44335363 caaaggacaatttggtaatattaacacacaaaacagacacattaattacactgacaacttttattaagaaatgtgaaaaaa-caaagggggtttacatat 44335265  T
Q  106 agggatggagggagta 121  Q
    ||| | ||||||||||    
T  44335264 aggaacggagggagta 44335249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 38680549 - 38680468
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag 87  Q
    |||| ||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38680549 caaatgacaatttgataatattaacacacaaaatagacacattaattacactaacaacttttcttaagaaatgtgaaaaaag 38680468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 8984690 - 8984805
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagagg-ttacata 104  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||| ||| ||||| |||||||||||| |||||| |||| |||||||    
T  8984690 caaatgacaatttagtaatattaacacacaaaacagacacattaattacactaacaattttccttaaaaaatgtgaaaaatgcaaag-gaggcttacata 8984788  T
Q  105 tagggatggagggagta 121  Q
    ||||||  |||||||||    
T  8984789 tagggacagagggagta 8984805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 27531173 - 27531058
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||| |||||| ||||||||||||||| |||| | ||||||||| || ||| ||||||||||||||||||||||||||| |||||| ||  |||||||     
T  27531173 caaagaacaattaagtaatattaacacacaaaacaaacacattaattatactgacaacttttcttaagaaatgtgaaaaatgcaaagggaacttacatac 27531074  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  27531073 agggacggagggagta 27531058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 2342978 - 2342892
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    |||| |||||||| |||||||||||||| |||||||||||||||| || |||||||| ||||||||| |||||||||||||||||||    
T  2342978 caaaagacaatttggtaatattaacacacaaaatagacacattaagtaaactaacaatttttcttaaaaaatgtgaaaaaagcaaag 2342892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 48721897 - 48721978
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag 87  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||| |||||| ||| |||||||||||||||||||||||||    
T  48721897 caaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacagcttttcttaagaaatgtgaaaaaag 48721978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 23982636 - 23982736
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagt 120  Q
    ||||||||||||| |||| ||||||||||| |||| | ||||||||||||||||||||||||||| |||||| |   ||||||||||||| |||||||||    
T  23982636 taatattaacacacaaaacagacacattaattacattgacaacttttcttaagaaatgtgaaaaatgcaaaggggacttacatatagggacggagggagt 23982735  T
Q  121 a 121  Q
    |    
T  23982736 a 23982736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 32047516 - 32047432
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| |||||||| |||||||||||||| |||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  32047516 caaatgacaatttcgtaatattaacacacaaaacaaacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaa 32047432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 33231914 - 33231830
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||| |||||| ||||||||| ||||||||||||||||| ||||    
T  33231914 caaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaactttttttaagaaatgtgaaaaaggcaa 33231830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 47643614 - 47643502
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||||||||||||||||||||||||||| || |||  |||||||| |||||| ||||||||||||||||||||||| |||||||||| ||| ||||||      
T  47643614 caaaggacaatttagtaatattaacacaaaacata--cacattaattacactgacaacttttcttaagaaatgtga-aaaagcaaagggagtttacatta 47643518  T
Q  106 agggatggagggagta 121  Q
    ||||| |||| |||||    
T  47643517 agggacggagagagta 47643502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 51997029 - 51996913
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaa-tgtgaaaaaagcaaagagaggttacata 104  Q
    |||||||| |||| |||||||||||||| |||| | ||| ||||| |||||| |||||||||||||||||| |||||||| ||||||| | | |||||||    
T  51997029 caaaggacgatttggtaatattaacacagaaaacatacaaattaattacactgacaacttttcttaagaaattgtgaaaatagcaaagggggtttacata 51996930  T
Q  105 tagggatggagggagta 121  Q
    |||||| ||||||||||    
T  51996929 tagggacggagggagta 51996913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 52141219 - 52141321
Alignment:
Q  21 taatattaacacataaaatagacac--attaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggaggga 118  Q
    ||||||||||||| |||||||||||  ||||| |||||||| || ||||||||| ||||||||||||||||||  ||||||||||||||||| ||| |||    
T  52141219 taatattaacacacaaaatagacacgcattaattacactaataatttttcttaaaaaatgtgaaaaaagcaaatggaggttacatatagggacggatgga 52141318  T
Q  119 gta 121  Q
    |||    
T  52141319 gta 52141321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 16582602 - 16582528
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||| |||||||||||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  16582602 gacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaa 16582528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 50692483 - 50692369
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||| | || | ||||||||||||||||||||||||||  |||||| | | ||| ||||    
T  50692483 caaaggacaatttggtaatactaacacacaaaatagacacattaattgcattgacaacttttcttaagaaatgtgaaaagggcaaagggggcttatatat 50692384  T
Q  106 agggatggagggagt 120  Q
    |||||  ||||||||    
T  50692383 agggactgagggagt 50692369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 15911590 - 15911655
Alignment:
Q  15 atttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtg 80  Q
    |||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  15911590 atttggtaatattaacacacaaaatagacacattaagtacactaacaacttttcttaagaaatgtg 15911655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 20564849 - 20564764
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||| |||||||| |||||||||||||||||| |||||||||||  ||||||| ||||||||||||| |||||||||||| |||||    
T  20564849 caaaagacaattttgtaatattaacacataaagtagacacattagttacactatcaacttttcttaacaaatgtgaaaaatgcaaa 20564764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 32152226 - 32152153
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||| |||||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  32152226 acaatttggtaatattaacacacaaaatagacacattaattgcaccaacaacttttcttaagaaatgtgaaaaa 32152153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 3143477 - 3143393
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| |||||||| |||||||||||||| |||  ||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  3143477 caaaagacaattttgtaatattaacacacaaagcagacacattaattacaatgacaacttttcttaagaaatgtgaaaaaagcaa 3143393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 5085118 - 5085202
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| |||||||| |||||||||||||| |||| ||||||||||| |||||| |||||||||||||| |||||||||||| ||||    
T  5085118 caaaagacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaaaaaatgtgaaaaaggcaa 5085202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 25258404 - 25258325
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||| ||||||| || |||||||||||||||||||| | ||||||||||||||||||| |||| |||||||    
T  25258404 caaaggacaatttggtaatatcaagacataaaatagacacattaattgcactaacaacttttcttaaaaaatatgaaaaa 25258325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 25269451 - 25269372
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||||  |||||| |||||||||||||| ||||||||||||    
T  25269451 caaaggaaaatttcgtaatattaacacataaaacagacacattatttacactgacaacttttcttaaaaaatgtgaaaaa 25269372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 31808009 - 31808115
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatgg 113  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||| |||| |||| |||||  | | ||| ||||||||||||    
T  31808009 aatttggtaatattaacacacaaaatagacacattaattacactaacaacttttctcaagaagtgtg-aaaatgcaaaaggtgcttaaatatagggatgg 31808107  T
Q  114 agggagta 121  Q
     |||||||    
T  31808108 tgggagta 31808115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 28723690 - 28723756
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtg 80  Q
    ||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||    
T  28723690 aatttggtaatattaacacacaaaatagacacattaattacactaacaacttttcttaaaaaatgtg 28723756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 44395609 - 44395531
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    ||||||| ||||| ||||||||||||||||||||| ||| ||||| |||||| ||||| ||||||||||||||||||||    
T  44395609 caaaggataattttgtaatattaacacataaaataaacatattaattacactgacaacatttcttaagaaatgtgaaaa 44395531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 32144385 - 32144300
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||| |||||||| ||||||||||| || |||||||||||||||| | ||| |||||||||||||||||||||| ||||| |||||    
T  32144385 caaatgacaatttggtaatattaacgcacaaaatagacacattaaatgcaccaacaacttttcttaagaaatgtaaaaaatgcaaa 32144300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 41737199 - 41737114
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||| |||||||| |||||||||||||| ||||||||||  |||| |||||||||||||||||||||||| ||||| ||| |||||    
T  41737199 caaaagacaatttggtaatattaacacacaaaatagacattttaattacactaacaacttttcttaagaagtgtgataaatgcaaa 41737114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 10842393 - 10842288
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatgg 113  Q
    ||||| ||||||||||||||  ||||||||| ||||| | || ||||||||||||||||||||||||||||||| |||  | ||||| ||||||||| |     
T  10842393 aatttggtaatattaacaca--aaatagacatattaattgcattaacaacttttcttaagaaatgtgaaaaaagtaaaagggggttatatatagggacga 10842296  T
Q  114 agggagta 121  Q
    ||||||||    
T  10842295 agggagta 10842288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 29140683 - 29140767
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||||||||| |||||||||| ||| |||| ||||||||||| |||||   |||||||||||||||||||||||||| ||||    
T  29140683 caaaggacaattttgtaatattaatacacaaaacagacacattaattacaccggcaacttttcttaagaaatgtgaaaaaggcaa 29140767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 47754671 - 47754751
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| |||||||| |||||||||||||| |||||||||||||||| | ||||||||| |||| ||||||||||| ||||||    
T  47754671 caaatgacaatttggtaatattaacacaaaaaatagacacattaattgcactaacaattttttttaagaaatgtaaaaaaa 47754751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 6282548 - 6282469
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||  |||||||||||||||||||||||||||||| |  |||||||| |||||||| |||| ||||||||    
T  6282548 caaaggacaattttataatattaacacataaaatagacacattaattgtactaacaatttttcttatgaaacgtgaaaaa 6282469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 34696912 - 34696991
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||||| |||| ||||| ||||| |||||| |||||||||||||| ||||||||||||    
T  34696912 caaatgacaatttcgtaatattaacacacaaaacagacatattaattacactgacaacttttcttaaaaaatgtgaaaaa 34696991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 35366013 - 35366098
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||| ||||||||  ||||||||||||| |||||||| ||||||  ||||||||||||||||  |||||||| |||||||||||||    
T  35366013 caaaagacaatttgataatattaacacacaaaatagatacattacttacactaacaacttttagtaagaaatatgaaaaaagcaaa 35366098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 119
Target Start/End: Complemental strand, 46495382 - 46495270
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagagg-ttacatat 105  Q
    ||||||||||||  ||||||||||||| |||| ||||||||||| |||||| |||| |||| || | ||||||||||||| ||||| |||| ||||||||    
T  46495382 aaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaatttttttttaaaaatgtgaaaaaaacaaag-gaggtttacatat 46495284  T
Q  106 agggatggagggag 119  Q
    | ||| ||||||||    
T  46495283 atggacggagggag 46495270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 3072207 - 3072147
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaa 72  Q
    |||||||| |||||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  3072207 acaatttaataatattaacacataaaataaacacattaattgcactaacaacttttcttaa 3072147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 44163306 - 44163226
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| ||||||||| ||||||||||||| |||| | ||||||||| |||||| | ||||||| ||||||||||||||||||    
T  44163306 caaatgacaatttaataatattaacacacaaaacaaacacattaattacactgataactttttttaagaaatgtgaaaaaa 44163226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 9675697 - 9675775
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||| |||||||||||||| |||  ||||| ||||| |||||| |||||||||||||||||| || |||||    
T  9675697 aaaggacaatttcgtaatattaacacacaaatcagacaaattaattacactgacaacttttcttaagaaacgtaaaaaa 9675775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 28334265 - 28334323
Alignment:
Q  27 taacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  28334265 taacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaa 28334323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 47070990 - 47071044
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaac 60  Q
    |||| |||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  47070990 caaatgacaatttggtaatattaacacataaaatagacacattaattacactaac 47071044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 28679856 - 28679928
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||| ||||||||||||| |||||||||||||||| | || ||||||||||| |||| ||||||||||||    
T  28679856 acaatttaataatattaacacacaaaatagacacattaattgcattaacaactttttttaa-aaatgtgaaaaa 28679928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 40261669 - 40261592
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaa 83  Q
    |||||| ||||||  ||||||||||||| |||||| ||||||||| | ||||||| ||||||| ||||||||||||||    
T  40261669 caaagggcaatttgataatattaacacacaaaataaacacattaattgcactaactacttttcataagaaatgtgaaa 40261592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 43189174 - 43189062
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacatta--actacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagg 108  Q
    |||||||| |||||||||||| | |||||||||| ||||  | | |||||||||||||||||||||| ||||| ||| | ||| |  | ||| |||||||    
T  43189174 gacaatttggtaatattaacatacaaaatagacatattataattgcactaacaacttttcttaagaattgtgacaaatgtaaaaattgcttagatatagg 43189075  T
Q  109 gatggagggagta 121  Q
    |||||||||||||    
T  43189074 gatggagggagta 43189062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 13698652 - 13698592
Alignment:
Q  16 tttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaa 76  Q
    |||||||||||||||||  |||||| ||| ||||| |||||||||||||||||||||||||    
T  13698652 tttagtaatattaacacgcaaaataaacatattaattacactaacaacttttcttaagaaa 13698592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 47133468 - 47133548
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaa-cttttcttaagaaatgtgaaaaa 85  Q
    |||| ||||||||| ||||||||||||| |||||| ||||||||| |||| ||||||  |||| |||||||||||||||||    
T  47133468 caaatgacaatttaataatattaacacacaaaataaacacattaattacattaacaatttttttttaagaaatgtgaaaaa 47133548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 13352903 - 13352832
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 82  Q
    ||||||||  |||||||||||||||||| ||||||||||| |  |||||| || ||||||||||||||||||    
T  13352903 gacaatttgctaatattaacacataaaacagacacattaattgaactaactacatttcttaagaaatgtgaa 13352832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 23393542 - 23393629
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagaga 95  Q
    |||| ||||||||| ||| ||||| ||| |||||||| ||||||| |||| |||||||||||||||| |||| |||||||| ||||||||    
T  23393542 caaatgacaatttaataa-attaatacacaaaatagatacattaattacattaacaacttttcttaaaaaatatgaaaaaa-caaagaga 23393629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 3143765 - 3143842
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| ||||||||  ||||| |||||||  ||||||||||||||| ||||||| ||||||||||||||| || |||||||    
T  3143765 caaaagacaatttgataataataacaca--aaatagacacattaattacactatcaacttttcttaagacatatgaaaaa 3143842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 3831121 - 3831039
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| |||||||| |||||||||||||| |||||||| ||||||| || ||| | |||||||||||| |||||||||||| ||||    
T  3831121 caaatgacaatttcgtaatattaacacacaaaatagatacattaa-ta-actgataacttttcttaaaaaatgtgaaaaatgcaa 3831039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 8877846 - 8877762
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| |||||||| |||||||||||||| |||| | ||||||||| || ||| |||| ||||||||| |||| ||||||| ||||    
T  8877846 caaatgacaatttcgtaatattaacacacaaaacaaacacattaattatactgacaatttttcttaaaaaatatgaaaaaggcaa 8877762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 44652890 - 44652965
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    ||||| ||||| | |||||||||| ||| |||| ||||||||||| ||||||||||   ||||||||||||||||||||    
T  44652890 caaagaacaatgtggtaatattaaaacacaaaacagacacattaattacactaaca---tttcttaagaaatgtgaaaa 44652965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 35001299 - 35001378
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||  ||| ||||||||| |||| |||||  || | |||||| |||||||||||||| ||||||||||||    
T  35001299 caaaggacaatttcataacattaacacacaaaacagacattttgattacactgacaacttttcttaataaatgtgaaaaa 35001378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 46591181 - 46591110
Alignment:
Q  1 agaagcaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaa 72  Q
    |||| ||||||||||||   ||||||||||||| |||| | ||||||||| |||||| ||||||||||||||    
T  46591181 agaaacaaaggacaattcgataatattaacacacaaaacaaacacattaattacactcacaacttttcttaa 46591110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 5322058 - 5322136
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||| ||||||| |||||| |||| ||||||||||| |||| | | |||||||||||| |||| ||||||| ||||    
T  5322058 acaatttcgtaatataaacacacaaaacagacacattaattacattgataacttttcttaaaaaatatgaaaaaggcaa 5322136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 9684748 - 9684826
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||| ||||||||||| || |||| ||||||||||| ||||   | ||||||| |||| ||||||||||||    
T  9684748 aaaggacaattttgtaatattaacgcacaaaacagacacattaattacatcgataactttttttaaaaaatgtgaaaaa 9684826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 10160759 - 10160709
Alignment:
Q  40 agacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||| ||||    
T  10160759 agacacattaattacactgataacttttcttaagaaatgtgaaaaaggcaa 10160709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 34031384 - 34031450
Alignment:
Q  3 aagcaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttct 69  Q
    ||||||||||||||| ||||||||| ||| | |||||| |||| |||||||||||| |||| |||||    
T  34031384 aagcaaaggacaattaagtaatattcacatacaaaataaacacgttaactacactaccaacctttct 34031450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 36085043 - 36084965
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||| |||||  ||||||||||||| |||| ||| ||||||| |||||| | || ||||||||| ||||||||||||    
T  36085043 aaaggataatttcttaatattaacacacaaaacagatacattaattacactgataatttttcttaaaaaatgtgaaaaa 36084965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 15457844 - 15457929
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||| ||||||||  |||||||| |||| |||||| | | |||||||  ||||||||||||| ||||||||| ||||||| |||||    
T  15457844 caaatgacaatttgataatattatcacacaaaataaatatattaactgtactaacaactttttttaagaaatatgaaaaatgcaaa 15457929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 22786758 - 22786827
Alignment:
Q  3 aagcaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaa 72  Q
    ||||||| || |||||||||| ||||| ||| ||| |||||||||||||||||||| | | |||||||||    
T  22786758 aagcaaaagataatttagtaaaattaatacacaaactagacacattaactacactaccgatttttcttaa 22786827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 34012131 - 34012070
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaactttt 67  Q
    |||| ||||||||  |||||||||||||||||| ||||||||||| | |||| |||||||||    
T  34012131 caaaagacaatttcataatattaacacataaaacagacacattaattgcactgacaactttt 34012070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 40702486 - 40702441
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacact 57  Q
    |||||||| ||||||| || ||||||||||||||||||||||||||    
T  40702486 acaatttaataatattcacgcataaaatagacacattaactacact 40702441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 4817935 - 4818019
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    |||| ||||||||  ||||||||| ||| |||| |  |||| ||| |||||  |||||||||||||||||||||||||||| |||||    
T  4817935 caaaagacaatttgataatattaatacacaaaaca--cacaataattacaccgacaacttttcttaagaaatgtgaaaaaaacaaag 4818019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 4829735 - 4829819
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    |||| ||||||||  ||||||||| ||| |||| |  |||| ||| |||||  |||||||||||||||||||||||||||| |||||    
T  4829735 caaaagacaatttgataatattaatacacaaaaca--cacaataattacaccgacaacttttcttaagaaatgtgaaaaaaacaaag 4829819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 12845051 - 12845130
Alignment:
Q  42 acacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagta 121  Q
    ||||||||||| |||  ||||| ||||||||||||||||||||| |||| | | ||||| ||  ||||| ||||||||||    
T  12845051 acacattaactgcacagacaacatttcttaagaaatgtgaaaaatgcaatggggggttatattaagggacggagggagta 12845130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 25063284 - 25063213
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaat 77  Q
    ||||||||||||  |||||||||||||| |||| ||||||||||  | || ||| |||||||||||| ||||    
T  25063284 caaaggacaattaggtaatattaacacacaaaacagacacattatttgcattaataacttttcttaaaaaat 25063213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 29302494 - 29302557
Alignment:
Q  22 aatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||| | |||| | | ||||| | |||||| |||||||||||||||||||||||||||    
T  29302494 aatattaacatacaaaacaaatacattgattacactgacaacttttcttaagaaatgtgaaaaa 29302557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 51390584 - 51390679
Alignment:
Q  27 taacacataaaatagacacattaactacactaacaacttttc-ttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagta 121  Q
    ||||||| |||||||||||||||| | || |||||| | ||| |||||||||||||||||  ||||  | | ||| ||||||||| ||||||||||    
T  51390584 taacacacaaaatagacacattaattgcattaacaattcttctttaagaaatgtgaaaaattcaaaaggtgcttagatatagggacggagggagta 51390679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 37733937 - 37734007
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    ||||||||| ||| ||||| |||| ||||| | ||||||||| ||||| ||| |||||||||||| |||||    
T  37733937 taatattaaaacacaaaatggacaaattaattgcactaacaatttttcgtaaaaaatgtgaaaaatgcaaa 37734007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 4081992 - 4081931
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaa 75  Q
    |||||||||||||||||| | ||| || ||||||||| | || ||| |||||||||||||||    
T  4081992 aatttagtaatattaacatacaaactaaacacattaattgcattaataacttttcttaagaa 4081931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 34102395 - 34102330
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||||||||| |||| ||||||||||| |||| | | || ||||||||| |||| ||||||||    
T  34102395 taatattaacacacaaaacagacacattaattacaatgaaaatttttcttaaaaaatttgaaaaaa 34102330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 40205614 - 40205671
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaac 63  Q
    ||||||||||| |||||||||| ||||| |||||||||| ||||| | || |||||||    
T  40205614 caaaggacaatctagtaatattcacacacaaaatagacatattaatttcattaacaac 40205671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 47489963 - 47489902
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaa 72  Q
    ||||||||| ||| ||| ||| ||||| |||||||||||| || ||| ||||||||||||||    
T  47489963 gacaatttaataagattcacaaataaactagacacattaaatatacttacaacttttcttaa 47489902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 291664 - 291704
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacaca 46  Q
    |||| ||||||||||||||||||||| | ||||||||||||    
T  291664 caaatgacaatttagtaatattaacatacaaaatagacaca 291704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 16395585 - 16395693
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaa-tgtgaaaaaagcaaagagaggttacatatagggatg 112  Q
    ||||| |||||||||||| | |||||||||||||||| |||||  | ||| |||||||| ||| |||||| ||| ||||   || ||||| ||||| |||    
T  16395585 aatttggtaatattaacatacaaaatagacacattaattacaccgataacatttcttaaaaaattgtgaagaaaacaaaataagtttacacataggaatg 16395684  T
Q  113 gagggagta 121  Q
     ||||||||    
T  16395685 tagggagta 16395693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 8e-52; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 39690515 - 39690630
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  39690515 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaaggggggttacatat 39690614  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  39690615 agggacggagggagta 39690630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 27642577 - 27642467
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  27642577 caaaggataatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag-ggggttacatat 27642479  T
Q  106 agggatggaggg 117  Q
    ||||| ||||||    
T  27642478 agggacggaggg 27642467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 21912195 - 21912081
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | | ||| ||||    
T  21912195 caaaagacaatttaataatattaacacataaaatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag-gggcttatatat 21912097  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  21912096 agggacggagggagta 21912081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 27587913 - 27587798
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||||||||||||||||||||||||||| |||| ||||||||||| || ||| ||||||||||||||||||||||||||||| |||| ||| ||||||      
T  27587913 caaaggacaatttagtaatattaacacacaaaacagacacattaattatactgacaacttttcttaagaaatgtgaaaaaagtaaagggagtttacatta 27587814  T
Q  106 agggatggagggagta 121  Q
    | ||| ||||||||||    
T  27587813 aaggacggagggagta 27587798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 30348106 - 30348210
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||| || | |||||||||||||| ||||||||||||||||||||||| | ||||| ||    
T  30348106 caaaggaaaatttggtaatattaacacacaaaatagacacattaagtaaattaacaacttttcttcagaaatgtgaaaaaagcaaagagggcttacacat 30348205  T
Q  106 aggga 110  Q
    |||||    
T  30348206 aggga 30348210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 38972156 - 38972270
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||| ||||||||||||  |||| |||||||||||| |||||||||||||||||||||||||||||||||| | |||  | | ||||||||    
T  38972156 caaaggacaatttggtaatattaacatttaaa-tagacacattaattacactaacaacttttcttaagaaatgtgaaaaatgtaaaatgtgtttacatat 38972254  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  38972255 agggacggagggagta 38972270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 4857523 - 4857611
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacac----attaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| |||||||||||||||||||||||||||||||||||    ||||| |||||||||||||||| ||||||||||||||||||||||    
T  4857523 caaatgacaatttagtaatattaacacataaaatagacacattaattaattacactaacaacttttattaagaaatgtgaaaaaagcaa 4857611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 43060553 - 43060640
Alignment:
Q  20 gtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatag 107  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||||||||||| |||||  |||||||||||||    
T  43060553 gtaatattaacacacaaaatagacacattaattacactaacaacttttattaaaaaatgtgaaaaaaacaaaggaaggttacatatag 43060640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 3559056 - 3559136
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||||||||| |||||||||||||| |||||||||||||||| || || ||||| |||||||||||||||||||||||    
T  3559056 caaaggacaatttggtaatattaacacacaaaatagacacattaattataccaacaatttttcttaagaaatgtgaaaaaa 3559136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 15898492 - 15898606
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||||||||||||  ||||||||||||| |||| ||||||||||| |||||| |||||||||||||||||| ||| |||| |||||| | | ||||||||    
T  15898492 caaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaaagtg-aaaatgcaaagggggtttacatat 15898590  T
Q  106 agggatggagggagta 121  Q
    | ||| ||||||||||    
T  15898591 atggacggagggagta 15898606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 21574909 - 21574988
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||| |||||||||||| | |||||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  21574909 caaaggacaatttggtaatattaacatacaaaatagacacattaagtacactaaaaacatttcttaagaaatgtgaaaaa 21574988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 16144 - 16258
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||||||||||||||||||||| ||||| |||||||| ||||||| | ||||||||||||| | | |||||||||||||| | |||| ||  ||| | ||    
T  16144 caaaggacaatttagtaatattcacacaaaaaatagatacattaattgcactaacaactttccgttagaaatgtgaaaaaggtaaaggga-cttataaat 16242  T
Q  106 agggatggagggagta 121  Q
    ||||||||||||||||    
T  16243 agggatggagggagta 16258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 29866264 - 29866185
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||| || |||||||||||||| |||| ||||| ||||| | ||||||||||||||||||||||||||||||||    
T  29866264 caaaggacaacttggtaatattaacacacaaaaaagacatattaattgcactaacaacttttcttaagaaatgtgaaaaa 29866185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 35569042 - 35569113
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||||| |||||||| ||||||||||| |||||| | |||||||||||||||||||||||||    
T  35569042 aatttagtaatattaatacataaaacagacacattaattacactgataacttttcttaagaaatgtgaaaaa 35569113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 36177367 - 36177288
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||| |||||    
T  36177367 caaatgacaattttgtaatattaacacacaaaatagacacattaattacactgataacttttcttaagaaatgtaaaaaa 36177288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 14044542 - 14044608
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag 87  Q
    ||||||||| |||||||||||||| ||||||| || |||||||||||||||||||||||||||||||    
T  14044542 taatattaatacataaaatagacatattaactgcattaacaacttttcttaagaaatgtgaaaaaag 14044608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 10523309 - 10523417
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggat 111  Q
    ||||||| |||||||||||||| |||| ||||||||||| |||||| | |||||||||||| |||| |||||||||| ||||| | ||||||| | |||     
T  10523309 acaatttggtaatattaacacacaaaacagacacattaattacactgataacttttcttaaaaaatatgaaaaaagc-aagagggcttacataaaaggac 10523407  T
Q  112 ggagggagta 121  Q
    ||||||||||    
T  10523408 ggagggagta 10523417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 18729653 - 18729548
Alignment:
Q  16 tttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggag 115  Q
    |||| ||||||||||||| |||||||||||||||| ||||| || || |||||||||||||||||||||||  ||| || | ||||||| || || ||||    
T  18729653 tttaataatattaacacacaaaatagacacattaattacacaaataatttttcttaagaaatgtgaaaaaaaaaaaaagcgattacatacagagacggag 18729554  T
Q  116 ggagta 121  Q
    ||||||    
T  18729553 ggagta 18729548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 3247303 - 3247387
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||||||||| |||||||||||| | |||| ||||| ||||| ||||||  |||||||||||||||||||||||||| ||||    
T  3247303 caaaggacaatttcgtaatattaacatacaaaacagacatattaattacactgtcaacttttcttaagaaatgtgaaaaaggcaa 3247387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 11980779 - 11980712
Alignment:
Q  18 tagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| |||| |||||||    
T  11980779 tagtaatattaacacacaaaatagacacattaattacactaacaacttttattaaaaaatatgaaaaa 11980712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 32067903 - 32067788
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||| |||||||| |||||||||||||| ||||||||||||| || | ||||||| | |||||||||||||||| ||||||| | | || | ||||||||    
T  32067903 caaatgacaatttggtaatattaacacacaaaatagacacatgaattgcactaactatttttcttaagaaatgtaaaaaaagtacaaagggcttacatat 32067804  T
Q  106 agggatggagggagta 121  Q
    || || ||||| ||||    
T  32067803 agagacggaggaagta 32067788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 20946162 - 20946078
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| ||||||||  ||||||||||||| ||||||||||| |||| | |||||||||| ||||||||||||| ||||||| ||||    
T  20946162 caaatgacaatttgataatattaacacacaaaatagacacgttaattgcactaacaacgtttcttaagaaatatgaaaaatgcaa 20946078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 34877733 - 34877657
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||| |||||||||||||| |||| ||||| ||||| |||||| ||||| ||||||||||||||||||||| ||||    
T  34877733 aatttggtaatattaacacacaaaacagacaaattaattacactgacaacatttcttaagaaatgtgaaaaaggcaa 34877657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 4738705 - 4738626
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||| ||||||||||||||||||||| |||| | | ||||||| |||||| ||||  |||||||||||||||||||||    
T  4738705 caaaggtcaatttagtaatattaacacacaaaacaaatacattaattacactgacaatatttcttaagaaatgtgaaaaa 4738626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 25017703 - 25017782
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||||| |||| ||||||||||| || ||| ||||| |||||||||||| ||||||||    
T  25017703 caaatgacaatttggtaatattaacacacaaaacagacacattaattatactgacaacatttcttaagaaacgtgaaaaa 25017782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 10656657 - 10656566
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatag 107  Q
    ||||| ||||| |||||||||||||||  |||||||| | || |||||| ||||||||||||||||||||||| ||||  ||||||| ||||||    
T  10656657 aatttggtaattttaacacataaaata--cacattaattgcattaacaatttttcttaagaaatgtgaaaaaaacaaaaggaggttatatatag 10656566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 25690735 - 25690833
Alignment:
Q  23 atattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagta 121  Q
    ||||||||||| |||| | ||||||||| |||||  |||||||||||||||||||||||| ||||||||| | | | |||||  |||| ||||||||||    
T  25690735 atattaacacacaaaacatacacattaattacaccgacaacttttcttaagaaatgtgaacaaagcaaagggggctaacataaggggacggagggagta 25690833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 33583887 - 33583809
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||| |||||||||||||||||||| ||||||| | |||| |  ||| ||||||||||| |||||||||||||||||    
T  33583887 aaaggataatttagtaatattaacacacaaaatagtcgcattgataacattaacaactttttttaagaaatgtgaaaaa 33583809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 41521263 - 41521185
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    |||| ||||||||| ||||||||||||| |||||||||| ||||| | ||||||||| ||||||||| |||||| ||||    
T  41521263 caaatgacaatttaataatattaacacacaaaatagacatattaatttcactaacaatttttcttaaaaaatgtaaaaa 41521185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 7510667 - 7510602
Alignment:
Q  20 gtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||| |||| | ||||||||| |||||||| |||||||||||| ||||||||||||    
T  7510667 gtaatattaacacacaaaacatacacattaattacactaataacttttcttaaaaaatgtgaaaaa 7510602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 15967149 - 15967222
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag 87  Q
    ||||| |||||||||| ||| |||| ||||||||||| |||||  ||||| |||||||||||||||||||||||    
T  15967149 aatttggtaatattaatacacaaaacagacacattaattacaccgacaacctttcttaagaaatgtgaaaaaag 15967222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 33862845 - 33862925
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttctt-aagaaatgtgaaaaaa 86  Q
    ||||||||||||||||||||||  | | |||| ||||||||||| |||||| |||| ||||||| ||||||||||||||||    
T  33862845 aaaggacaatttagtaatattagtatacaaaacagacacattaattacactgacaatttttcttaaagaaatgtgaaaaaa 33862925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 600840 - 600769
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaat 77  Q
    |||| ||||||||  ||||||||||||| | |||||||||||||| | ||||||||| ||||||||||||||    
T  600840 caaatgacaatttgataatattaacacacataatagacacattaattgcactaacaagttttcttaagaaat 600769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 4745202 - 4745115
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttctt-aagaaatgtgaaaaaagcaaag 92  Q
    |||| |||||||| ||||||||||| || |||||| ||||||||| | ||||||| ||||||||| || |||||||||||| ||||||    
T  4745202 caaatgacaatttggtaatattaacccacaaaataaacacattaattgcactaactacttttcttaaaaaaatgtgaaaaatgcaaag 4745115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 4378178 - 4378132
Alignment:
Q  45 cattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||    
T  4378178 cattaattacactaacaactttttttaagaaatgtgaaaaaagcaaa 4378132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 29874253 - 29874200
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaa 59  Q
    |||| |||||||| |||||||||||||| |||||||| ||||||||||||||||    
T  29874253 caaatgacaatttggtaatattaacacacaaaatagatacattaactacactaa 29874200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 10934073 - 10933997
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||| |||||||||||| | |||| ||||||||||| |||||| ||||| ||||| || |||||||||||| ||||    
T  10934073 aatttggtaatattaacatacaaaacagacacattaattacactgacaacatttctgaaaaaatgtgaaaaaggcaa 10933997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 12895238 - 12895355
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttc--ttaagaaatgtgaaaaaagcaaagagaggttacat 103  Q
    |||| |||||||| |||||||||| ||| |||| ||||||||||| |||||  ||||||| ||  |||| ||||||||||||| ||||| ||  | |||     
T  12895238 caaaagacaatttggtaatattaatacacaaaacagacacattaattacaccgacaacttctcttttaaaaaatgtgaaaaaaacaaagggaactaacac 12895337  T
Q  104 atagggatggagggagta 121  Q
    || |||| ||||||||||    
T  12895338 atggggacggagggagta 12895355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 16496511 - 16496434
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    ||||||| ||||| |||||||||| ||| ||| |||||| | ||| ||||||||||||||||  |||||||||||||||    
T  16496511 caaaggataatttggtaatattaatacacaaa-tagacataataattacactaacaacttttggtaagaaatgtgaaaa 16496434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 129684 - 129624
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaactttt 67  Q
    |||| ||||||| |||||||||| ||| |||||||||||||||| |||||| | |||||||    
T  129684 aaagaacaatttggtaatattaatacacaaaatagacacattaattacactgataactttt 129624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 16969434 - 16969370
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||| | ||| |||||||||||| || |||||||| |||| |||| ||||||||||||    
T  16969434 taatattaacaaacaaattagacacattaattatactaacaatttttgttaaaaaatgtgaaaaa 16969370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 20976353 - 20976405
Alignment:
Q  40 agacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    ||||||||||| |||||| |||| |||||||||||||| ||||||||| ||||    
T  20976353 agacacattaattacactgacaaattttcttaagaaatatgaaaaaagtaaag 20976405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 27798216 - 27798152
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||| |||| ||||| ||||| |||||| ||||  |||||||| ||||||||||||    
T  27798216 taatattaacacacaaaacagacaaattaattacactgacaatatttcttaaaaaatgtgaaaaa 27798152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 9946387 - 9946466
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||| ||||| |||||||||| || ||||| ||||||||||| || |   ||||||||| |||| ||||||||||||    
T  9946387 caaaggataatttcgtaatattaatacgtaaaacagacacattaattatatcgacaacttttattaaaaaatgtgaaaaa 9946466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 31642498 - 31642576
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||| ||| |||||||||||||| |||| ||||||||||| |||||| |||| |||| |||| ||||||| ||||    
T  31642498 caaaagacagtttggtaatattaacacacaaaa-agacacattaattacactgacaattttttttaataaatgtgtaaaa 31642576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 34676175 - 34676125
Alignment:
Q  57 taacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatag 107  Q
    ||||||||||||||||||||| || |||||||||| || ||||| ||||||    
T  34676175 taacaacttttcttaagaaatatgtaaaaagcaaaaaggggttatatatag 34676125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 457846 - 457758
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaa-gaaatgtgaaaaaagcaaaga 93  Q
    |||| ||||||||| ||||||| | ||| |||||||| ||||||| |  ||||||||||||| ||||  |||  |||||||||||||||    
T  457846 caaatgacaatttaataatattcagacacaaaatagatacattaattgtactaacaacttttattaataaaaaatgaaaaaagcaaaga 457758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 5845251 - 5845167
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| ||||||||  ||||||||| ||| |||| | | ||||||| |||||| |||||  |||||||||||| ||||||| ||||    
T  5845251 caaatgacaatttgataatattaatacacaaaacaaatacattaattacactgacaacaattcttaagaaatatgaaaaaggcaa 5845167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 27925393 - 27925337
Alignment:
Q  65 tttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagta 121  Q
    |||||||||||||||||||||||||| | | |  |||||| ||||| ||||||||||    
T  27925393 tttcttaagaaatgtgaaaaaagcaatgggtgcctacataaagggacggagggagta 27925337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 36750805 - 36750882
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||| | || ||||||||||||| |||| |  |||||||  ||| |||||||||||| ||||||| |||||||||    
T  36750805 caaaggacagtctaataatattaacacacaaaaca--cacattacttacgctaacaacttttattaagaattgtgaaaaa 36750882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 43454042 - 43453986
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaat 77  Q
    ||||||||||| | ||||  |||||||||| || ||||||||||||| |||||||||    
T  43454042 taatattaacatacaaaactgacacattaattatactaacaactttttttaagaaat 43453986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 2e-49; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 19839006 - 19838891
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||    
T  19839006 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagggggattacatat 19838907  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  19838906 agggacggagggagta 19838891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 1763888 - 1763791
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacat 103  Q
    |||||||||||||||||||||||||||| |||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||| ||||||    
T  1763888 caaaggacaatttagtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatatgaaaaaagcaaacagagtttacat 1763791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 22410879 - 22410990
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatataggga 110  Q
    |||||||| |||||||||||| | |||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| | | ||||||||| |||    
T  22410879 gacaatttggtaatattaacataaaaaacagacacattaattacactaacaacttttcttaagaaatgtgaaaaaagtaaag-gggtttacatataagga 22410977  T
Q  111 tggagggagtagt 123  Q
    |||||||||||||    
T  22410978 tggagggagtagt 22410990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 28238359 - 28238460
Alignment:
Q  20 gtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggag 119  Q
    |||||||||||||| |||||||||||||||| || |||||||| |||| ||||||||||||||| |||||||||||| |||||||||| | |||||||||    
T  28238359 gtaatattaacacacaaaatagacacattaattatactaacaatttttattaagaaatgtgaaagaagcaaagagagcttacatatagaggtggagggag 28238458  T
Q  120 ta 121  Q
    ||    
T  28238459 ta 28238460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 15981864 - 15981753
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatataggga 110  Q
    |||||||| |||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||  ||||| ||| || |||||||| |    
T  15981864 gacaatttggtaatattaacacacaaaacagacacattaattacaccaacaacttttcttaagaaatgtgaaaaatacaaagggagcttgcatataggaa 15981765  T
Q  111 tggagggagtag 122  Q
     |||||||||||    
T  15981764 cggagggagtag 15981753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 31945943 - 31946029
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    |||| |||||||| |||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||    
T  31945943 caaacgacaatttggtaatattaacacacaaaatagacacattaattacactaacaaattttcttaagaaatgtgaaaaaaggaaag 31946029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 11302930 - 11302851
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||| || |||||||||||||||||||||||||||||||    
T  11302930 caaaggacaattttgtaatattaacacaaaaaacagacacattaattatactaacaacttttcttaagaaatgtgaaaaa 11302851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 3887979 - 3888088
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatataggga 110  Q
    |||||||| |||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||  |||||  | | ||||||| | |||    
T  3887979 gacaattt-gtaatattaacacacaaaatagacacattaactgcaataacaacttttcttaagaaatgtgaaaattgcaaaaggtgcttacatacaagga 3888077  T
Q  111 tggagggagta 121  Q
     ||||||||||    
T  3888078 cggagggagta 3888088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 5895805 - 5895727
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||| |||||||||| ||| |||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  5895805 aaaggacaatttcgtaatattaatacacaaaacagacacattaattacattaacaacttttcttaagaaatgtgaaaaa 5895727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 3729464 - 3729384
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||| ||||| ||||| |||||||||||||||| ||||||    
T  3729464 caaagaacaatttggtaatattaacacacaaaatagacacattaattacaccaacaatttttcttaagaaatgtaaaaaaa 3729384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 16327198 - 16327082
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagagg-ttacata 104  Q
    |||| |||||||| |||||||||||||| |||| ||||||||||| || | | |||||||||||||||||||||||||||  ||||| |||| |||||||    
T  16327198 caaatgacaatttggtaatattaacacacaaaacagacacattaattatattgacaacttttcttaagaaatgtgaaaaatacaaag-gaggcttacata 16327100  T
Q  105 tagggatggagggagtag 122  Q
    |||| | | |||||||||    
T  16327099 taggaacgcagggagtag 16327082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 12514616 - 12514695
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||||| |||||||||||||||| | ||||||||| ||||||||| | ||||||||||    
T  12514616 caaaagacaatttggtaatattaacacacaaaatagacacattaattgcactaacaatttttcttaaaatatgtgaaaaa 12514695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 4250690 - 4250768
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||| || |||||||||||||| |||| ||||||||||| |||||| |||| |||||||||||||||| |||||    
T  4250690 aaaggacaacttcgtaatattaacacacaaaacagacacattaattacactgacaatttttcttaagaaatgtaaaaaa 4250768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 9428227 - 9428125
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagt 120  Q
    ||||||||||||| |||||||| ||||||| || | || ||||||||||||||||| |||||||||  |||| |||  ||||||||| || |||||||||    
T  9428227 taatattaacacacaaaatagatacattaattatagtagcaacttttcttaagaaacgtgaaaaaaataaagggagtctacatatagagacggagggagt 9428128  T
Q  121 agt 123  Q
    |||    
T  9428127 agt 9428125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 16350596 - 16350480
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagagg-ttacata 104  Q
    |||| |||||||| |||||||||||||| |||| |||| |||||| |||||| ||||||||| |||| ||||||||||||  ||||| |||| |||||||    
T  16350596 caaatgacaatttggtaatattaacacacaaaacagactcattaattacactgacaacttttattaaaaaatgtgaaaaatacaaag-gaggcttacata 16350498  T
Q  105 tagggatggagggagtag 122  Q
    |||| | | |||||||||    
T  16350497 taggaacgcagggagtag 16350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 31780199 - 31780090
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||||||||||| |||| | |||||||||||||||| | || || |||||||| ||||||||| |||||||  ||||  | | ||||||||    
T  31780199 caaaggacaatttagtaatatcaacatacaaaatagacacattaattgcattatcaacttttattaagaaatatgaaaaatacaaatggtgcttacatat 31780100  T
Q  106 agggatggag 115  Q
    ||||| ||||    
T  31780099 agggacggag 31780090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 6791451 - 6791338
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||| ||||||||| ||||||||||||| |||| |  |||||||| |||| | ||||||||| |||||||||||||||||||||||  | | | |||||     
T  6791451 caaatgacaatttaataatattaacacacaaaaca--cacattaattacattgacaactttttttaagaaatgtgaaaaaagcaaaaggggctaacataa 6791354  T
Q  106 agggatggagggagta 121  Q
     |||||||||||||||    
T  6791353 ggggatggagggagta 6791338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 10669305 - 10669393
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagag 94  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||| | ||||||||| |||| | || |||||| |||||| |||||||    
T  10669305 caaagaacaatttggtaatattaacacacaaaatagacacattaattgcactaacaatttttttaaaaaaatgtaaaaaaaacaaagag 10669393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 31536072 - 31536008
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||| |||||||||| | ||||| |||||||||||||||||||||||||||| |||||    
T  31536072 taatattaacaaataaaatagatatattaattacactaacaacttttcttaagaaatgtaaaaaa 31536008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 9461360 - 9461289
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||||||||||||||| | ||||||||| |||||  ||||| |||||||| ||||||||||||    
T  9461360 aatttagtaatattaacacataaaacaaacacattaattacaccgacaacatttcttaataaatgtgaaaaa 9461289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 11081971 - 11081892
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||| ||||| |||| ||||| ||| |||||||| | ||||| ||||||||||||||||||||||| ||||||||||    
T  11081971 caaaggataatttggtaacattaatacagaaaatagatatattaattacactaacaacttttcttaagatatgtgaaaaa 11081892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 5084568 - 5084650
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacatt----aactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    |||||||||||||  ||||||||||||| |||| | |||||||    || |||||||||||||||||||||||||||||||||    
T  5084568 caaaggacaatttgataatattaacacacaaaacaaacacatttattaattacactaacaacttttcttaagaaatgtgaaaa 5084650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 30248631 - 30248563
Alignment:
Q  13 caatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 82  Q
    |||||| |||||||||||||| |||| | ||||||||| |||||| ||||||||||||||||||||||||    
T  30248631 caatttggtaatattaacacacaaaacaaacacattaa-tacacttacaacttttcttaagaaatgtgaa 30248563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 31487407 - 31487477
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    ||||||||||||| |||||| ||||||||| ||  |||||||||||| | |||||||||| ||||||||||    
T  31487407 taatattaacacacaaaatatacacattaattatgctaacaacttttttcaagaaatgtgcaaaaagcaaa 31487477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 197482 - 197558
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 82  Q
    |||| ||||||||| ||||||| ||||| |||| | ||||||||| || ||| | ||||||||||||||||||||||    
T  197482 caaatgacaatttaataatattgacacacaaaacaaacacattaattatactgataacttttcttaagaaatgtgaa 197558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 3307965 - 3308056
Alignment:
Q  31 acataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagtag 122  Q
    |||||||  ||||||||||||| |||  ||||  ||||||||||||||||||||| |||| || |||||| ||  ||||| |||||||||||    
T  3307965 acataaatcagacacattaactgcacagacaatatttcttaagaaatgtgaaaaatgcaatgaaaggttatattaagggagggagggagtag 3308056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 16186643 - 16186569
Alignment:
Q  10 ggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||| |||| ||||||| | |||| ||||||||||| |||||||| |||||||||||  ||||||||||||    
T  16186643 ggacaatttcgtaa-attaacatacaaaacagacacattaattacactaataacttttcttacaaaatgtgaaaaa 16186569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 30466007 - 30466080
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag 87  Q
    ||||| |||||||||||||| |||| | ||| ||||| |||||  ||||||||| ||||||||||| |||||||    
T  30466007 aatttggtaatattaacacacaaaacaaacatattaattacaccgacaacttttgttaagaaatgtaaaaaaag 30466080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 10260626 - 10260698
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaa-cttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||||| |||||||||||| || |||| |||| ||||||  |||| ||||||||||| |||||    
T  10260626 aatttagtaatattaatacataaaatagatacgttaattacattaacaatttttttttaagaaatgtaaaaaa 10260698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 34513249 - 34513329
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||| ||||| |||||||||||||| |||| ||||||||||  ||  || |||| ||||||||| |||||| ||||||    
T  34513249 caaaggataatttcgtaatattaacacacaaaacagacacattatttatgctgacaaattttcttaaaaaatgtaaaaaaa 34513329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 5604534 - 5604588
Alignment:
Q  32 cataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||||||||||||||||||||||| |||||| ||| ||||| |||  ||||||||    
T  5604534 cataaaatagacacattaactacattaacaaatttacttaataaaaatgaaaaaa 5604588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 50
Target Start/End: Original strand, 31153025 - 31153063
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaa 50  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  31153025 acaatttagtaatattgacatataaaatagacacattaa 31153063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 11082153 - 11082112
Alignment:
Q  25 attaacacataaaatagacacattaactacactaacaacttt 66  Q
    ||||| ||| |||||||||||||||| |||||||||||||||    
T  11082153 attaatacagaaaatagacacattaattacactaacaacttt 11082112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 33607430 - 33607345
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    ||||||| |||||  |||||||||||||  ||||||||||||||| | || |||||| |||| || | |||||  |||||||||||    
T  33607430 caaaggataatttgataatattaacacactaaatagacacattaattgcattaacaatttttttttaaaaatggaaaaaaagcaaa 33607345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 8644842 - 8644906
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||| | |||||||| | ||||| |   |||||||||||| |||||||||||||||||    
T  8644842 taatattaacatacaaaatagatatattaattgtgctaacaactttttttaagaaatgtgaaaaa 8644906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 5e-47; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 24962396 - 24962510
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||    
T  24962396 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaaggga-attacatat 24962494  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  24962495 agggacggagggagta 24962510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 43980622 - 43980727
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatgg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || || || |||||||||||| ||    
T  43980622 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag--aaaagggggtacatatagggacgg 43980719  T
Q  114 agggagta 121  Q
    ||||||||    
T  43980720 agggagta 43980727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 26878759 - 26878874
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||| |||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| | | ||||||||    
T  26878759 caaaggacaatttggtaatattaacacacaaaatagacacattaattacattaacaacttttcttaagaaatgtgaaaaaggcaaagggggtttacatat 26878858  T
Q  106 agggatggagggagta 121  Q
    || || ||||||||||    
T  26878859 agagacggagggagta 26878874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 31746436 - 31746551
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||| |||||||| |||||||||||||| |||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  31746436 caaatgacaattttgtaatattaacacacaaaatagacacattaattgcactaacaatttttcttaagaaatgtgaaaaaagcaaagaggggttacatat 31746535  T
Q  106 agggatggagggagta 121  Q
    | ||| | ||||||||    
T  31746536 aaggacgaagggagta 31746551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 16644067 - 16644182
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||| |||||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||| ||| | |||||||     
T  16644067 caaagaacaatttagtgatattaacacacaaaatatacacattaattacactaacaacttttcttaagaaatgtgaaaaatgcaatgagtgcttacatac 16644166  T
Q  106 agggatggagggagta 121  Q
    ||||| ||| ||||||    
T  16644167 agggacggaaggagta 16644182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 24276588 - 24276701
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||| |||||||| |||||||||||||| ||  |||||||||||| || ||||||||||||| ||||||||||||||||| |||||||| | ||||||||    
T  24276588 caaatgacaatttggtaatattaacacacaa--tagacacattaattatactaacaactttttttaagaaatgtgaaaaaggcaaagagggtttacatat 24276685  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  24276686 agggacggagggagta 24276701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 36437576 - 36437459
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||| | ||||||||  ||||||||| ||||||| |||| |||||||||| ||| |||     
T  36437576 caaaggacaatttggtaatgttaacacacaaaatagacacattaattgcactaacattttttcttaaaaaatgtggaaaaggcaaagagagcttatatag 36437477  T
Q  106 agggatggagggagtagt 123  Q
    ||||| ||||||||||||    
T  36437476 agggacggagggagtagt 36437459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 12998724 - 12998839
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||||||||||||||||||||| ||||| ||||||  |||||||| |  ||| |||||||||||||||||||||||||||  |||||| || ||| ||||    
T  12998724 caaaggacaatttagtaatattcacacacaaaatatgcacattaattgaactgacaacttttcttaagaaatgtgaaaaagacaaagaaagcttaaatat 12998823  T
Q  106 agggatggagggagta 121  Q
    || |||||||||||||    
T  12998824 agagatggagggagta 12998839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 14577683 - 14577762
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||| ||||||| |||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14577683 caaagtacaatttggtaatattaacaaacaaaatagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 14577762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 22590446 - 22590364
Alignment:
Q  10 ggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    ||||||||| || ||||||||||| |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  22590446 ggacaatttggtgatattaacacaaaaaatagacacattaattgcactaacaaattttcttaagaaatgtgaaaaaagcaaag 22590364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 25198364 - 25198280
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  25198364 caaaggacaatttggtaatattaacacacaaaacaaacacattaattacactgacaacttttcttaagaaatgtgaaaaaggcaa 25198280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 40602072 - 40602172
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||| | |||||| ||||||||| || ||||||||||||||||||| | | ||||||||    
T  40602072 caaaggataatttagtaatattaacacataaataagacacattaattgcactaataacttttctgaaaaaatgtgaaaaaagcaaagggggcttacatat 40602171  T
Q  106 a 106  Q
    |    
T  40602172 a 40602172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 43191508 - 43191588
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| | |||||  |||||||||||||||| ||||||    
T  43191508 caaatgacaatttagtaatattaacacataaaatagacacattaactaaattaacattttttcttaagaaatgtaaaaaaa 43191588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 37956196 - 37956117
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||| || |||||||||||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  37956196 caaaggacaaattcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaa 37956117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 2562761 - 2562847
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    ||||||||||||| |||||||||||| | |||| ||||||||||| |||||| |||  |||||||||||||||||||||||||||||    
T  2562761 caaaggacaatttcgtaatattaacatacaaaacagacacattaattacactgacagtttttcttaagaaatgtgaaaaaagcaaag 2562847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 7172294 - 7172209
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||| ||||||||  ||||||||||||| |||||||||||||||| ||||| || || ||||||||||||||||||||||||||||    
T  7172294 caaatgacaattttataatattaacacacaaaatagacacattaattacaccaaaaagttttcttaagaaatgtgaaaaaagcaaa 7172209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 14522641 - 14522750
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggat 111  Q
    ||||||| |||||||||||||| |||| | ||||||||| ||||||||||| |||||||||||||||||||||| | ||||  |  ||||||||| |||     
T  14522641 acaatttggtaatattaacacacaaaacatacacattaattacactaacaatttttcttaagaaatgtgaaaaatgtaaaggaaacttacatataaggac 14522740  T
Q  112 ggagggagta 121  Q
    ||||||||||    
T  14522741 ggagggagta 14522750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 40517815 - 40517703
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||| |||||||||||||| |||| ||||||||| |||   || |||||||||||||| |||||||||||| |||||||| | ||||||||    
T  40517815 caaaggacaatttggtaatattaacacacaaaacagacacatttact---ctgacaacttttcttaaaaaatgtgaaaaatgcaaagagggcttacatat 40517719  T
Q  106 agggatggagggagta 121  Q
    | ||| | ||||||||    
T  40517718 aaggacgaagggagta 40517703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 45203833 - 45203717
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||||||||| || |||||||||||| | |||||||||||||||| | |||||| || ||| |||||||||||| ||||| |||||| | | |||||||     
T  45203833 caaaggacaagttggtaatattaacatacaaaatagacacattaattgcactaaaaaattt-cttaagaaatgtaaaaaatgcaaagggtgcttacatac 45203735  T
Q  106 agggatggagggagtagt 123  Q
    ||||||||||||||||||    
T  45203734 agggatggagggagtagt 45203717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 3006820 - 3006888
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 82  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||    
T  3006820 aatttagtaatattaacacataaaatagacatattaattatactaacaacttttcttaagaaatatgaa 3006888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 25185105 - 25185021
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| |||||||| |||||||||||||| |||| ||||||||||  |||||| ||||||||||||||||||||||||||| ||||    
T  25185105 caaatgacaatttcgtaatattaacacacaaaacagacacattagttacactgacaacttttcttaagaaatgtgaaaaaggcaa 25185021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 57220 - 57299
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| ||||||| |||||||||||||| |||| ||||||||||| |||||  ||||||||||||||||||||||||||||    
T  57220 aaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacttttcttaagaaatgtgaaaaaa 57299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 14906676 - 14906562
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||| ||||| |||||||||||||| |||||||||| ||||| |||| ||| ||||||| | || |||||||||||||| ||| || ||||| |||     
T  14906676 caaaggataatttggtaatattaacacacaaaatagacatattaattacattaataacttttatgaaaaaatgtgaaaaaagtaaa-aggggttatatag 14906578  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  14906577 agggacggagggagta 14906562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 38770218 - 38770297
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||||| |||||| ||||||||| |||||| ||||||| ||||||||||| |||||||    
T  38770218 caaatgacaatttcgtaatattaacacacaaaataaacacattaattacactgacaacttatcttaagaaatatgaaaaa 38770297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 7772586 - 7772508
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||| |||||||||||||| |||| ||||||||||| |||| | |||||||||||||| |||||| |||||    
T  7772586 aaaggacaatttcgtaatattaacacacaaaacagacacattaattacaatgacaacttttcttaaaaaatgtaaaaaa 7772508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 885536 - 885448
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagaga 95  Q
    |||||||||||||  ||||||||||||| |||  ||||| | ||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  885536 caaaggacaatttgataatattaacacacaaac-agacataataattacactgacaacttttcttaataaatgtgaaaaaagcaaagaga 885448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 5191584 - 5191664
Alignment:
Q  10 ggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    ||||||||| |||||||||||||| |||| ||||||||||| | | ||||||| |||||||||||||||||||||| |||||    
T  5191584 ggacaatttggtaatattaacacacaaaacagacacattaattgc-ctaacaatttttcttaagaaatgtgaaaaatgcaaa 5191664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 12762917 - 12762856
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaactttt 67  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | || |||||||||||    
T  12762917 caaaggacaatttagtaatattaacacacaaaatagacacattaattgcattaacaactttt 12762856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 25888655 - 25888591
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||| | |||||||||| ||||| |||||||||||||||||||||||||||| |||||    
T  25888655 taatattaacatacaaaatagacatattaattacactaacaacttttcttaagaaatgtaaaaaa 25888591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 37141801 - 37141717
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| |||||||| |||||||||||||| |||| ||| ||||||| |||||| ||||||||| |||| |||||||||||| ||||    
T  37141801 caaatgacaatttcgtaatattaacacacaaaacagatacattaattacactgacaactttttttaaaaaatgtgaaaaatgcaa 37141717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 4273955 - 4274018
Alignment:
Q  22 aatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||||||| | ||||||||| |||||||||||  |||||||||||||||||||||    
T  4273955 aatattaacacataaaacaaacacattaattacactaacaatatttcttaagaaatgtgaaaaa 4274018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 24512198 - 24512277
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| ||||||||  ||||||||||||| |||| ||||||||||| |||||| |||| ||||||||| ||||||||||||    
T  24512198 caaaagacaatttgataatattaacacacaaaacagacacattaattacactgacaaattttcttaaaaaatgtgaaaaa 24512277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 40790863 - 40790749
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||| |||||||| |||||||||| ||| |||  |||| |||||| |||||| ||||||||||||||||||||||||||||  |||| | | ||||||      
T  40790863 caaatgacaatttggtaatattaatacacaaac-agacgcattaattacactgacaacttttcttaagaaatgtgaaaaaaataaagggggtttacatta 40790765  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  40790764 agggacggagggagta 40790749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 45185298 - 45185377
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||  ||||||||| |||||||| ||||||||| | ||||   |||||||||||||||||||||||||||    
T  45185298 caaaggacaatttgataatattaatacataaaacagacacatttattacaacgacaacttttcttaagaaatgtgaaaaa 45185377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 45283825 - 45283927
Alignment:
Q  18 tagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggaggg 117  Q
    ||||||||||||||||||||| ||||||||||| |||| | | || |||||||||||||| |||||||| ||||  | | ||||||||||||| |||||     
T  45283825 tagtaatattaacacataaaacagacacattaattacattgataatttttcttaagaaatttgaaaaaa-caaaaggggcttacatatagggacggagga 45283923  T
Q  118 agta 121  Q
    ||||    
T  45283924 agta 45283927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 31673671 - 31673591
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag 87  Q
    ||||||| ||||| |||||||||||| | |||||| ||||||||| |||||  |||||||||||||| ||||||||||||||    
T  31673671 caaaggataatttggtaatattaacatacaaaataaacacattaattacac-cacaacttttcttaaaaaatgtgaaaaaag 31673591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 34882730 - 34882665
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||||||||| |||||||||||||||| | || |||||| ||||||||| |||||||||||||    
T  34882730 taatattaacacacaaaatagacacattaattgcattaacaatttttcttaaaaaatgtgaaaaaa 34882665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 43182593 - 43182528
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||| ||| |||| ||||||||    
T  43182593 taatattaacacataaaatagacacgttaactacattaataacttttcataaaaaatttgaaaaaa 43182528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 27640 - 27560
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| ||||||||||||| ||| ||||||||||||||| |||| |  |||||||||| ||||||||||||||  |||||||    
T  27640 caaatgacaatttagtaacattcacacataaaatagacgcattcataacactaacaatttttcttaagaaataagaaaaaa 27560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 14739504 - 14739433
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaat 77  Q
    ||||||| ||||| |||||||||||| |||||||| ||||||||| |||||  |||||||||||||| ||||    
T  14739504 caaaggataatttggtaatattaacatataaaataaacacattaattacacggacaacttttcttaaaaaat 14739433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 16002754 - 16002833
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||| |||||  ||||||||||||| ||||  |||||||||| |||||  |||||||||||||| ||||||||||||    
T  16002754 caaaggataatttcttaatattaacacacaaaactgacacattaattacacagacaacttttcttaaaaaatgtgaaaaa 16002833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 38203023 - 38203102
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||||| |||| | ||| ||||| |||||  ||||||||| |||||||||||||||||    
T  38203023 caaatgacaatttcgtaatattaacacacaaaacaaacatattaattacaccgacaacttttattaagaaatgtgaaaaa 38203102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 38761389 - 38761468
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| ||||||||  ||||||||||||| |||| ||||||||||| |||||| ||||||||| |||| |||| |||||||    
T  38761389 caaatgacaatttcataatattaacacacaaaacagacacattaattacactgacaactttttttaataaatatgaaaaa 38761468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 40337222 - 40337301
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||| |||||||||||| | |||| | ||||||||| || ||| | |||||||| ||||||||||||||||    
T  40337222 caaaggacaattttgtaatattaacatacaaaacatacacattaattatactgataacttttcataagaaatgtgaaaaa 40337301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 30262569 - 30262635
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaa 72  Q
    |||| |||||||| |||||||||||| | |||||||||||||||| | |||||||||||||| ||||    
T  30262569 caaatgacaatttggtaatattaacatacaaaatagacacattaattgcactaacaactttttttaa 30262635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 41087049 - 41086971
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    ||||||| |||||  ||||||||||||| |||  ||||||||||| |||||| ||||  ||||||||||||||||||||    
T  41087049 caaaggaaaatttgataatattaacacacaaatcagacacattaattacactgacaatatttcttaagaaatgtgaaaa 41086971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 44255528 - 44255431
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacata 104  Q
    |||| ||||||||  ||||||||||||| |||| || |||||||| ||| || ||| |||||||||| |||||||| |||||||||| ||| |||||||    
T  44255528 caaatgacaatttgataatattaacacacaaaaaaggcacattaattacgctcacatcttttcttaacaaatgtga-aaaagcaaagggagcttacata 44255431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 34157992 - 34157951
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacat 47  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  34157992 caaatgacaatttagtaatattaacacataaaatagacacat 34157951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 45183892 - 45183965
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgt 79  Q
    ||||||||||||| ||||||||||||||||||| | ||| ||| | |||  | |||||||||||||||||||||    
T  45183892 caaaggacaatttggtaatattaacacataaaacaaacatatttattactatgacaacttttcttaagaaatgt 45183965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 14846952 - 14847032
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| |||||| | ||||||||||| || |||  ||||||||||| |||||  |||||||||||||| |||||||||||||    
T  14846952 caaaagacaatatggtaatattaacgcacaaagcagacacattaattacaccgacaacttttcttaaaaaatgtgaaaaaa 14847032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 38773379 - 38773459
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaac-ttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| ||||| |||||||| |||| ||||||||||| | |||| ||||| |||| |||||||||||||||||    
T  38773379 caaaagacaatttcgtaatgttaacacacaaaacagacacattaattgcactgacaacttttttttaagaaatgtgaaaaa 38773459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 1177192 - 1177266
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||||||| |||||||||| | | |||| ||||||||||| |||||| | |||||||||||| |||||||||||||    
T  1177192 gacaatttcgtaatattaatatacaaaacagacacattaattacact-ataacttttcttaaaaaatgtgaaaaaa 1177266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 3113564 - 3113643
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| ||||||||  ||||||||||||| |||| ||||| ||||| |||||| | || |||| |||||||||||||||||    
T  3113564 caaaagacaatttgataatattaacacacaaaacagacatattaattacactgataattttttttaagaaatgtgaaaaa 3113643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 36309627 - 36309703
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    |||| ||||||||  ||||||||||||| |||||||||||||||| |||  |||||| |||  ||||||||||||||||    
T  36309627 caaatgacaatttgataatattaacacacaaaatagacacattaattacggtaacaaattt--ttaagaaatgtgaaaa 36309703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 30262633 - 30262699
Alignment:
Q  57 taacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagtagt 123  Q
    ||||||||||| |||||||||||||||||  |||| || | ||| || |||||||||||||||||||    
T  30262633 taacaactttttttaagaaatgtgaaaaatacaaaaagggcttaaatgtagggatggagggagtagt 30262699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 35709135 - 35709181
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacact 57  Q
    ||||||||  ||||||||||||||||| |||||||||||||||||||    
T  35709135 gacaatttgataatattaacacataaactagacacattaactacact 35709181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 17933780 - 17933699
Alignment:
Q  6 caaaggacaatttagtaatatt-aacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| |||| ||| |||||||| |||||| |||||||||||||||| ||||   |||| |||||||| ||||||||||||||    
T  17933780 caaatgacagtttggtaatatttaacacacaaaatagacacattaattacatcgacaatttttcttacgaaatgtgaaaaaa 17933699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 31252695 - 31252763
Alignment:
Q  15 atttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    |||| |||||||||||||| |||| ||||||||||| |||||| | || |||| ||||||||||||||||    
T  31252695 atttcgtaatattaacacacaaaacagacacattaattacactgataa-tttttttaagaaatgtgaaaa 31252763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 37600937 - 37600998
Alignment:
Q  24 tattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||||  ||||||||||| || ||| ||||| |||||||| ||||||||||||    
T  37600937 tattaacacataaatcagacacattaattatacttacaacatttcttaaaaaatgtgaaaaa 37600998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 39543709 - 39543778
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||||||||| || |||| ||||||||||| |||||  ||||| ||||||||||||| ||||||| ||||    
T  39543709 taatattaacgcacaaaacagacacattaattacacggacaacatttcttaagaaatatgaaaaaggcaa 39543778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 41541623 - 41541550
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtg 80  Q
    ||||||||||||  ||||||| ||||| |||||||||||||||  |  |||||| | |||||||||||||||||    
T  41541623 aaaggacaatttgataatattgacacacaaaatagacacattagttgtactaactatttttcttaagaaatgtg 41541550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 10396261 - 10396338
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||||| |||| | |||  |||| |||| | |||||||||||||| ||||||||||||    
T  10396261 caaatgacaatttcgtaatattaacacacaaaacaaaca--ttaattacattgacaacttttcttaataaatgtgaaaaa 10396338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 15702298 - 15702248
Alignment:
Q  41 gacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||||||||||||||||| |||||||||||||  |  ||||||||||||||    
T  15702298 gacacattaactacactaccaacttttcttaattagagtgaaaaaagcaaa 15702248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 7727391 - 7727456
Alignment:
Q  18 tagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaa 83  Q
    |||||| ||| ||||||||||| ||| |||||||| ||| | ||||||||||||| | ||||||||    
T  7727391 tagtaacattgacacataaaatggactcattaactgcaccaccaacttttcttaatatatgtgaaa 7727456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 5e-47; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 17663699 - 17663584
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  17663699 caaaggacaatttagtaatattaacacataaaataggcacattaattacactaacaacttttcttaagaaatgtgaaaaaagcaaaggggggttacatat 17663600  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  17663599 agggacggagggagta 17663584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 20362058 - 20361946
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||   ||||| ||||    
T  20362058 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaatttttcttaagaaatgtgaaaaaagcagag---ggttatatat 20361962  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  20361961 agggacggagggagta 20361946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 3645396 - 3645283
Alignment:
Q  8 aaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatag 107  Q
    |||||||||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||   ||||| ||||    
T  3645396 aaggacaatttagtaatattaatacacaaaatagacacattaagtaaactaacaacttttcttaagaaatgtgaaaaaagcaaagaggacttacacatag 3645297  T
Q  108 ggatggagggagta 121  Q
    |||  |||||||||    
T  3645296 ggacagagggagta 3645283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 26512146 - 26512048
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacata 104  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| || |||||||| |||| |||||||||||||||||||||||  ||| |||||||    
T  26512146 caaaggacaatttagtaatattaacacataaaataaacacattaattatactaacaattttttttaagaaatgtgaaaaaagcaaaaggagcttacata 26512048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 44424670 - 44424554
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||| |||||||||||| | |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||| ||| |  |||||      
T  44424670 caaaggacaatttcgtaatattaacatacaaaacagacacattaattacactaacaacttttcttaagaaatgtgaaaaatgcaatgagtgcctacatta 44424571  T
Q  106 agggatggagggagtag 122  Q
    ||||| |||||||||||    
T  44424570 agggacggagggagtag 44424554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 43709994 - 43709876
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaactttt-cttaagaaatgtgaaaaaagcaaagagaggttacata 104  Q
    |||||||||||| ||||||||||||||| ||||||||| |||||| | ||||||||| |||| |||||||||||||||||| |||||| | | |||||||    
T  43709994 caaaggacaattaagtaatattaacacacaaaatagacgcattaattgcactaacaatttttgcttaagaaatgtgaaaaatgcaaagggtgcttacata 43709895  T
Q  105 tagggatggagggagtagt 123  Q
     ||||||| ||||||||||    
T  43709894 cagggatgaagggagtagt 43709876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 45214784 - 45214684
Alignment:
Q  22 aatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagta 121  Q
    |||||||||||| |||| ||||||||||| |||||| ||||||||||||||||||||||||||| |||||| | | |||||||| |||| ||||||||||    
T  45214784 aatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaatgcaaagggggcttacatatcgggacggagggagta 45214685  T
Q  122 g 122  Q
    |    
T  45214684 g 45214684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 247735 - 247620
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||||| ||||||  ||||||||||||| |||||||||||||||| ||||||||||||||| ||||| ||||||||||||| | ||  ||| ||| ||||    
T  247735 caaagggcaattttataatattaacacacaaaatagacacattaattacactaacaactttccttaaaaaatgtgaaaaaacccaatggagcttaaatat 247636  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  247635 agggacggagggagta 247620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 14420752 - 14420637
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||||  | ||||||| |||| | | ||||||||    
T  14420752 caaaggacaatttggtaatattaacacacaaaacagacacattaattacactaacaacttttctttagaaaaataaaaaaagtaaagggggcttacatat 14420653  T
Q  106 agggatggagggagta 121  Q
    ||||| |||| |||||    
T  14420652 agggacggagagagta 14420637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 27297652 - 27297537
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||| ||||| |||||||||||||| |||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||||| | | ||||||      
T  27297652 caaaggataattttgtaatattaacacacaaaacagacacattaattacactaacagtttttcttaagaaatgtgaaaaaagcaaagggggtttacatta 27297553  T
Q  106 agggatggagggagta 121  Q
    |||||  |||||||||    
T  27297552 agggacagagggagta 27297537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 40346116 - 40346215
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatataggga 110  Q
    ||||||||||||||||||||||| |||||  ||||||||| | ||| ||||||||||||||| ||||||||||||| ||||||| | |||||||||||||    
T  40346116 gacaatttagtaatattaacacacaaaatgaacacattaattgcacaaacaacttttcttaaaaaatgtgaaaaaaacaaagagggtttacatataggga 40346215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 44421524 - 44421409
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||| ||||||||||||||||||||| | |||| ||| ||||||| |||||| |||| |||||||||||||||||||||||| |||| ||| ||||||      
T  44421524 caaatgacaatttagtaatattaacaaacaaaacagatacattaattacactgacaatttttcttaagaaatgtgaaaaaagtaaagggagtttacatta 44421425  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  44421424 agggacggagggagta 44421409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 11071746 - 11071676
Alignment:
Q  3 aagcaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaag 73  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||    
T  11071746 aagcaaaggacaatttagtaatattaacacataaattagacacattaattgcactaacaacttttcttaag 11071676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 4033656 - 4033559
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacat 103  Q
    ||||| |||||||||||||||||||||| |||| ||| ||||||| |||||||| ||||||||||||||||| | |||||||||||| ||| ||||||    
T  4033656 caaagaacaatttagtaatattaacacagaaaacagaaacattaattacactaataacttttcttaagaaatataaaaaaagcaaagggagtttacat 4033559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 11459228 - 11459143
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||||||||||||||||||||||||||| |||| ||||||||||  |||||  |||||||||| ||||||||||||||||||||||    
T  11459228 caaaggacaatttagtaatattaacacacaaaacagacacattatttacaccgacaacttttcataagaaatgtgaaaaaagcaaa 11459143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 41865789 - 41865676
Alignment:
Q  8 aaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatag 107  Q
    ||||| ||||| ||||| |||||||| |||||||||||||||| || || ||||||||||||||||||||||||||||||||||  | | ||||||  ||    
T  41865789 aaggataatttggtaatgttaacacacaaaatagacacattaattagaccaacaacttttcttaagaaatgtgaaaaaagcaaaaggggcttacattaag 41865690  T
Q  108 ggatggagggagta 121  Q
    ||| ||||||||||    
T  41865689 ggaaggagggagta 41865676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 4398554 - 4398633
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| |||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  4398554 caaatgacaatttcgtaatattaacacacaaaatagacacattaattacactaacaacttttcttaa-aaatgtgaaaaaa 4398633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 15851606 - 15851527
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||  ||||||||||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  15851606 caaaggacaatttcataatattaacacaaaaaacagacacattaattacactcacaacttttcttaagaaatgtgaaaaa 15851527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 37355111 - 37355032
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  37355111 caaatgacaattttgtaatattaacacacaaaagagacacattaattacacaaacaacttttcttaagaaatgtgaaaaa 37355032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 28264981 - 28265066
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||| |||||||| ||||||||||| || |||| | ||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  28264981 caaatgacaatttggtaatattaacgcacaaaacaaacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaaa 28265066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 13477064 - 13477148
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||| | ||||||||| ||||||||| |||||||||||| |||||    
T  13477064 aaaggacaatctagtaatattaacacataaaataaacatattaattgcactaacaatttttcttaaaaaatgtgaaaaatgcaaa 13477148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 17250991 - 17251070
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||||| |||| ||||||||||| || |||||||||||||||||| ||||||||||||    
T  17250991 caaatgacaattttgtaatattaacacacaaaacagacacattaattatactaacaacttttcttaaaaaatgtgaaaaa 17251070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 27749580 - 27749501
Alignment:
Q  13 caatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    ||||||||||||||||| ||| |||| ||||| ||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  27749580 caatttagtaatattaatacacaaaacagacatattaattacactgacaacttttcttaagaaatgtgaaaaaagtaaag 27749501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 35178828 - 35178903
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||||||| ||||||||| |||| |||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  35178828 gacaatttcgtaatattatcacacaaaacatacacattaactacactgacaacttttcttaagaaatgtgaaaaaa 35178903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 123
Target Start/End: Original strand, 8065102 - 8065219
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||| ||||| |||||||||||||| |||| ||||||||||| |||||| ||||| ||||||| ||||||||||||  |||| | |||  |||||      
T  8065102 caaaggataatttggtaatattaacacacaaaacagacacattaattacactgacaacatttcttaggaaatgtgaaaagggcaatgggagcctacatta 8065201  T
Q  106 agggatggagggagtagt 123  Q
    ||||| ||||||||||||    
T  8065202 agggacggagggagtagt 8065219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 21012928 - 21012843
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    ||||||| |||||  ||||||||||||| |||||| ||||||||| | |||||||||||||||||||||||| ||||||| |||||    
T  21012928 caaaggataatttgataatattaacacacaaaataaacacattaattgcactaacaacttttcttaagaaatttgaaaaatgcaaa 21012843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 43650109 - 43650024
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    ||||| |||||||||||||||||||| | |||| ||||||||||| |||||| |||| |||||| ||||||||| |||||||||||    
T  43650109 caaagaacaatttagtaatattaacatacaaaacagacacattaattacactgacaatttttctaaagaaatgtaaaaaaagcaaa 43650024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 9718210 - 9718286
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||| |||||||||||||| |||| ||||||||||| |||||| ||||| ||||||||||||||||||||| ||||    
T  9718210 aatttggtaatattaacacacaaaacagacacattaattacactgacaacatttcttaagaaatgtgaaaaatgcaa 9718286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 24774940 - 24774860
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| |||||||| |||||||||||||| |||||||| ||||||| |||||||| || ||||||||| |||||||||||||    
T  24774940 caaaagacaatttggtaatattaacacacaaaatagatacattaattacactaataaattttcttaaaaaatgtgaaaaaa 24774860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 38449759 - 38449859
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagt 120  Q
    ||||||||| ||| |||| ||||||||||| ||||  || ||||||| ||||||||||||||||||| ||||   ||||||||||||||| |||||||||    
T  38449759 taatattaatacacaaaacagacacattaattacaaaaataacttttattaagaaatgtgaaaaaagaaaaggagggttacatatagggacggagggagt 38449858  T
Q  121 a 121  Q
    |    
T  38449859 a 38449859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 41665785 - 41665705
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||||||||||||  || |||||||||| |||| ||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  41665785 caaaggacaatttgatactattaacacacaaaacagacacattaattacactgacaacatttcttaagaaatgtgaaaaaa 41665705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 45150766 - 45150842
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 82  Q
    |||||||||||| ||||||||||||||| |||||  ||||||||| | ||| |||||||||||||||||||||||||    
T  45150766 caaaggacaattgagtaatattaacacacaaaatgaacacattaattgcacaaacaacttttcttaagaaatgtgaa 45150842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 34330077 - 34329998
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||| |||||||||||||| |||| ||  ||||||| || ||||||||||||| |||||||||||||||||    
T  34330077 caaaggacaattttgtaatattaacacacaaaacaggtacattaattatactaacaactttttttaagaaatgtgaaaaa 34329998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 42250925 - 42250992
Alignment:
Q  25 attaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  42250925 attaaaacacaaaatagacacattaattacactaccaacttttcataagaaatgtgaaaaaagcaaag 42250992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 44274697 - 44274776
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| | ||||||||||||||||| ||||||||||| |||| | |||||||||||||| ||||||||||||    
T  44274697 caaatgacaatttggcaatattaacacataaaacagacacattaattacattgacaacttttcttaaaaaatgtgaaaaa 44274776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 2131824 - 2131753
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||| |||||||||||||| ||||||||||  |||| | |||||||||||||||||||||||||| |||||    
T  2131824 aatttggtaatattaacacacaaaatagacatgttaattgcactaacaacttttcttaagaaatgtaaaaaa 2131753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 2395848 - 2395797
Alignment:
Q  35 aaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  2395848 aaaatagacacattaattacactaacaacttttcttaagaaatgtaaaaaaa 2395797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 8384002 - 8384081
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||| |||||||    
T  8384002 caaatgacaatttggtaatattaacacacaaaataaacacattaattgcactaactatttttcttaagaaatatgaaaaa 8384081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 2048878 - 2048936
Alignment:
Q  26 ttaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    ||||||||||||||||| ||||||  ||||| |||||||||||||||||||||||||||    
T  2048878 ttaacacataaaatagagacattatttacaccaacaacttttcttaagaaatgtgaaaa 2048936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 35453763 - 35453816
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaa 59  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| ||||||||    
T  35453763 caaagaacaatttagtaatattaacatataaaatagacacattaattacactaa 35453816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 2521330 - 2521381
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacact 57  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  2521330 caaaagacaatttaataatattaccacataaaatagacacattaactacact 2521381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 2917156 - 2917207
Alignment:
Q  35 aaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||||||||||||||| || |||||||||||||||||||||||||| |||||    
T  2917156 aaaatagacacattaattatactaacaacttttcttaagaaatgtggaaaaa 2917207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 31644472 - 31644551
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||||| |||| ||||||||||| || ||| | |||||||||||  ||||||||||||    
T  31644472 caaatgacaattttgtaatattaacacaaaaaacagacacattaattaaactgataacttttcttataaaatgtgaaaaa 31644551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 3237798 - 3237717
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaaca--acttttcttaagaaatgtgaaaaa 85  Q
    ||||||| ||||| |||||||||||||| |||| ||||||||||| |||| ||| |  ||||||||||| ||||||||||||    
T  3237798 caaaggataattttgtaatattaacacacaaaacagacacattaattacattaataacacttttcttaaaaaatgtgaaaaa 3237717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 28190673 - 28190588
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||| |||||||| |||||||||||||| |||||| ||| ||||| || ||||||||||||   |||||||||| ||||| |||||    
T  28190673 caaatgacaatttggtaatattaacacaaaaaataaacatattaattatactaacaactttctctaagaaatgtcaaaaatgcaaa 28190588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 12121951 - 12121891
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaa 72  Q
    |||||||| ||||||| ||| |||||||||||| ||||| |||||||||||||||| ||||    
T  12121951 acaatttaataatattcacatataaaatagacatattaattacactaacaactttttttaa 12121891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 13534471 - 13534411
Alignment:
Q  24 tattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    |||||||||| |||| | ||||||||| |||||| ||||| ||||||||||||||||||||    
T  13534471 tattaacacacaaaacaaacacattaattacactgacaacatttcttaagaaatgtgaaaa 13534411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 28733898 - 28733821
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| ||||||||||||  ||||| ||||||||||| |||||  |||| ||||||||| ||||||||||||    
T  28733898 caaatgacaatttggtaatattaaca--taaaacagacacattaattacaccgacaatttttcttaaaaaatgtgaaaaa 28733821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 32677534 - 32677470
Alignment:
Q  22 aatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||||| ||||||||||||||||||| |  | |||||| ||||||||||||||||| |||||    
T  32677534 aatattaacccataaaatagacacattaattgtattaacaatttttcttaagaaatgtggaaaaa 32677470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 1246443 - 1246522
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||| |||||||  ||||||||||||| |||| | |||| |||| || ||| ||||||||| |||||||||||||||||    
T  1246443 caaagaacaatttcataatattaacacacaaaacaaacacgttaattatactgacaactttttttaagaaatgtgaaaaa 1246522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 14527684 - 14527619
Alignment:
Q  20 gtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||||||||||||| |||||||||||||||| ||| ||||||| |||| ||||  ||||||||||||    
T  14527684 gtaatattaacacacaaaatagacacattaattaccctaacaa-tttttttaaataatgtgaaaaaa 14527619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 16808853 - 16808915
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttc 68  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||| | |||| | ||||||||    
T  16808853 caaatgacaatttagtaatattaatacataaaatatacacattaattgcactcaaaacttttc 16808915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 16848134 - 16848196
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttc 68  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||| | |||| | ||||||||    
T  16848134 caaatgacaatttagtaatattaatacataaaatatacacattaattgcactcaaaacttttc 16848196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 20427003 - 20426929
Alignment:
Q  19 agtaatattaacacataaaatagacacattaactacactaacaacttttctt-aagaaatgtgaaaaaagcaaag 92  Q
    ||||||| ||||||| |||||||||||||||| | ||||||||| ||||||| || |||||| ||||| ||||||    
T  20427003 agtaataataacacacaaaatagacacattaatttcactaacaatttttcttaaaaaaatgtcaaaaatgcaaag 20426929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 36174827 - 36174901
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||| ||||| | |||||| ||||||||| ||||  | ||||||||| ||||||||||||| ||||||||    
T  36174827 gacaatttaataatactcacacatgaaatagacatattatttgcactaacaatttttcttaagaaacgtgaaaaa 36174901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 375375 - 375436
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaactttt 67  Q
    |||| ||||||||  ||||| ||||||| |||||||||||||||| ||||| ||||||||||    
T  375375 caaatgacaatttgataatactaacacacaaaatagacacattaattacacaaacaactttt 375436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 920701 - 920766
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||||||| | |||||| ||| ||||||||||||||| || ||  ||||||||||||||||||    
T  920701 taatattaacatacaaaataaacatattaactacactaactacattatttaagaaatgtgaaaaaa 920766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 34042100 - 34042200
Alignment:
Q  20 gtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggag 119  Q
    |||||||||||| | |||||||||||||||| |  |||||||| |||| | || |||||||||||  |||||| | | ||| |||||||| |||||||||    
T  34042100 gtaatattaacatacaaaatagacacattaattgaactaacaatttttttaaaaaaatgtgaaaattgcaaag-gggcttagatatagggctggagggag 34042198  T
Q  120 ta 121  Q
    ||    
T  34042199 ta 34042200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 3326799 - 3326715
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||||||||||||| ||||||||| | | |||| ||||||||||| |||||  |||| |||| |||| |||| ||||||| ||||    
T  3326799 caaaggacaatttaataatattaatatacaaaacagacacattaattacaccgacaattttttttaaaaaatatgaaaaaggcaa 3326715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 6597930 - 6597846
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||||| | ||| ||||| |||||||| |||||||||| ||||| ||||  ||||||||||  ||| ||||||||||||| ||||    
T  6597930 aaaggatattttggtaatgttaacacacaaaatagacatattaattacatcaacaactttttgtaaaaaatgtgaaaaaaacaaa 6597846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 11168729 - 11168666
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    |||||||||||||||||||| ||| |  || |||| |||||||||||||||| |||||| ||||    
T  11168729 taatattaacacataaaataaacataaaaattacattaacaacttttcttaataaatgtaaaaa 11168666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 22590426 - 22590484
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaa 72  Q
    |||||| ||| ||||||||| ||| |||||||||||| |||| |||||| |||||||||    
T  22590426 aatttaataaaattaacacacaaagtagacacattaattacattaacaatttttcttaa 22590484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 1604344 - 1604409
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttctta 71  Q
    |||||||||| ||| ||| ||| ||||||||| |||||| ||||||||||||  ||| ||||||||    
T  1604344 caaaggacaaattaataaaattcacacataaattagacatattaactacactgccaatttttctta 1604409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 7278683 - 7278740
Alignment:
Q  46 attaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacat 103  Q
    ||||| |||||| |||| ||||||||| ||||||||||||| ||||||| | ||||||    
T  7278683 attaattacactgacaatttttcttaacaaatgtgaaaaaaacaaagagggcttacat 7278740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 8667684 - 8667627
Alignment:
Q  35 aaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    |||| ||||| ||||| || ||| ||||||||||||| ||||||||||||| ||||||    
T  8667684 aaaacagacatattaattagactgacaacttttcttaggaaatgtgaaaaatgcaaag 8667627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 35241753 - 35241822
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||||||| | |||| ||||||||||| |||||  ||||| ||||||| ||||||| ||||| ||||    
T  35241753 taatattaacaaacaaaacagacacattaattacacagacaacatttcttatgaaatgtaaaaaaggcaa 35241822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 4758101 - 4758057
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaa 50  Q
    |||||||||||||  ||||||||||||| |||||| |||||||||    
T  4758101 caaaggacaatttcataatattaacacacaaaataaacacattaa 4758057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 6275617 - 6275677
Alignment:
Q  26 ttaacacataaaatagacacattaactacactaacaa-cttttcttaagaaatgtgaaaaa 85  Q
    |||||||| |||||||||||||||| | |||||||||  |||| |||||||||| ||||||    
T  6275617 ttaacacacaaaatagacacattaattgcactaacaatttttttttaagaaatgggaaaaa 6275677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 32860453 - 32860505
Alignment:
Q  33 ataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||| ||||| ||||||||||| ||||||||||||| ||  ||||||||    
T  32860453 ataaaataaacacactaactacactaccaacttttcttaataagagtgaaaaa 32860505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 12624771 - 12624656
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| | | ||||||||||    
T  12624771 caaaggacaatttagtaatattaacacataaaatagtcacattaattacactaacaacttttcttaagaaatgtgaaaaaagcaacggggggttacatat 12624672  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  12624671 agggacggagggagta 12624656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 31486563 - 31486447
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa-aaaagcaaagagaggttacata 104  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||| || | |||||||    
T  31486563 caaaggataatttagtaatattaacacacaaaatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaaaagcaaaaagggcttacata 31486464  T
Q  105 tagggatggagggagta 121  Q
    |||||| ||||||||||    
T  31486463 tagggacggagggagta 31486447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 20291407 - 20291300
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatgg 113  Q
    ||||||||||||||||| || |||||||||||||||| |||| || ||||||||||||||||||||||||||||||||| ||| ||||||||||||| |     
T  20291407 aatttagtaatattaacccacaaaatagacacattaattacattaccaacttttcttaagaaatgtgaaaaaagcaaagggagtttacatatagggacga 20291308  T
Q  114 agggagta 121  Q
    ||||||||    
T  20291307 agggagta 20291300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 25477300 - 25477216
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  25477300 caaatgacaattttgtaatattaacacataaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaa 25477216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 30153253 - 30153356
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatata 106  Q
    |||||| ||||| ||||||||| |||| |||| ||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||| ||||||| |    
T  30153253 aaaggataatttggtaatattatcacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaacgcaaagagagtttacataca 30153352  T
Q  107 ggga 110  Q
    ||||    
T  30153353 ggga 30153356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 26203200 - 26203090
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatataggga 110  Q
    |||||||| ||||||||||||||||||||| | ||||||| |||| |||||||||||||||| ||||||| |||||| |||| | | |||||||||||||    
T  26203200 gacaattttgtaatattaacacataaaatatatacattaattacagtaacaacttttcttaataaatgtggaaaaagtaaagggggcttacatataggga 26203101  T
Q  111 tggagggagta 121  Q
     ||||||||||    
T  26203100 cggagggagta 26203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 14602685 - 14602766
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag 87  Q
    |||| |||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14602685 caaatgacaatttggtaatattaacacaaaaactagacacattaattacactaacaacttttcttaagaaatgtgaaaaaag 14602766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 28116551 - 28116636
Alignment:
Q  22 aatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatag 107  Q
    |||||||||||| |||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||    
T  28116551 aatattaacacacaaaatagacatattaattacactaacaacttttcttaaaaaatgtgaaaaaagcaaagagaacttacatatag 28116636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 37175052 - 37175136
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||| |||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  37175052 caaaagacaatttggtaatattaacacacaaaatagacacattaattacac-aacaacttttcttaagaaatgtgaaaaaagcaaa 37175136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 13096567 - 13096686
Alignment:
Q  1 agaagcaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggtta 100  Q
    |||| |||| |||||||| |||||||||||||| || | ||||||||||| ||||||||||||||||||||| |||||||||||||| |||| ||| |||    
T  13096567 agaaacaaatgacaatttggtaatattaacacacaacacagacacattaattacactaacaacttttcttaa-aaatgtgaaaaaagtaaagggagttta 13096665  T
Q  101 catatagggatggagggagta 121  Q
     ||| ||||| ||||||||||    
T  13096666 aatacagggacggagggagta 13096686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 38136430 - 38136342
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagag 94  Q
    |||| ||||||||  ||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  38136430 caaatgacaatttgataatattaacacacaaaatagacacattaattacactaacaaattttcttaagaaatgtgaaaaaaccaaagag 38136342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 5416905 - 5417001
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatataggga 110  Q
    ||||||| |||||||||||| | |||||||||||||||  ||||| |||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  5416905 acaatttggtaatattaacaaacaaaatagacacatta--tacacaaacaacttttcttaagaaatgtgaaagaagcaaagagagcttacatacaggga 5417001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 29584969 - 29584883
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    |||| |||||||| |||||||||||||| | |||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||    
T  29584969 caaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaatgcaaag 29584883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 52198766 - 52198855
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacat 103  Q
    ||||| |||||||||| ||| | || ||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  52198766 aatttggtaatattaatacacagaacagacatattaattacactgacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacat 52198855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 7002258 - 7002142
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttctt-aagaaatgtgaaaaaagcaaagagaggttacata 104  Q
    ||||||| ||||| ||||||||||||||||||||| | ||||||| | || |||||| ||||||| |||||||||||||||||||||  | ||||| |||    
T  7002258 caaaggataatttggtaatattaacacataaaatataaacattaattgcattaacaatttttcttaaagaaatgtgaaaaaagcaaaagggggttatata 7002159  T
Q  105 tagggatggagggagta 121  Q
    |||||| ||||||||||    
T  7002158 tagggacggagggagta 7002142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 22750872 - 22750987
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||| |||||||| |||||||||| ||| |||| ||| ||||||| |||||  ||||||||||||||||||||||||||| |||||||| | ||||||      
T  22750872 caaatgacaatttggtaatattaatacacaaaacagatacattaattacacagacaacttttcttaagaaatgtgaaaaatgcaaagagggattacatta 22750971  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  22750972 agggacggagggagta 22750987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 50782853 - 50782774
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||| |||||||||| ||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  50782853 caaaggacaatttcgtaatattaagacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaa 50782774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 20262430 - 20262508
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||| |||||||||||||| |||| ||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  20262430 acaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaggcaa 20262508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 34543777 - 34543692
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||||||  |||| |||||||||||||| |||||||||||||||| |||||  |||||||||||||||||||||||| ||||||||    
T  34543777 caaaggattatttggtaatattaacacacaaaatagacacattaattacacggacaacttttcttaagaaatgtgaataaagcaaa 34543692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 3094257 - 3094177
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| |||||||| |||||||||||||| |||||||||||||||| |||  ||||||||||||||||||||||| ||||||    
T  3094257 caaatgacaatttggtaatattaacacacaaaatagacacattaattactttaacaacttttcttaagaaatgtcaaaaaa 3094177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 37625163 - 37625235
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||||||||||||||||||| |||||| ||||||||| || ||| ||||||||||||||||||||||||||||    
T  37625163 aatttagtaatattaacacacaaaataaacacattaattatactgacaacttttcttaagaaatgtgaaaaaa 37625235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 19654495 - 19654424
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  19654495 aatttggtaatatcaacacataaaatagacacattaattacactaacagtttttcttaagaaatgtgaaaaa 19654424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 39237619 - 39237698
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||| |||||||||||||| |||| ||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  39237619 caaaggacaatttcgtaatattaacacacaaaacagatacattaattacactgacaacttttcttaaaaaatgtgaaaaa 39237698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 41920068 - 41920147
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||||| |||||||| | ||||| | ||||||||||||||||||||||||||||||||    
T  41920068 caaaagacaatttggtaatattaacacacaaaatagaaatattaattgcactaacaacttttcttaagaaatgtgaaaaa 41920147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 56373374 - 56373453
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||||| |||||| ||||||||| | ||||||||| ||||||||||||||||||||||    
T  56373374 caaatgacaatttggtaatattaacacacaaaataaacacattaattgcactaacaatttttcttaagaaatgtgaaaaa 56373453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 20185693 - 20185803
Alignment:
Q  13 caatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa-gcaaagagaggttacatatagggat 111  Q
    |||||| |||||||||||||| ||||    |||||||| ||||||||||| ||||||||||||||||||||||| | |||| ||| |||||||||||||     
T  20185693 caatttggtaatattaacacacaaaacttgcacattaattacactaacaaattttcttaagaaatgtgaaaaaatgtaaagggagtttacatatagggac 20185792  T
Q  112 ggagggagtag 122  Q
    | |||||||||    
T  20185793 gtagggagtag 20185803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 22651539 - 22651453
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    |||| |||||||| |||||||||||| | |||||| ||||||||| |||| ||| || |||||||||||||||||||||||||||||    
T  22651539 caaaagacaatttggtaatattaacatacaaaataaacacattaattacattaataaattttcttaagaaatgtgaaaaaagcaaag 22651453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 10602236 - 10602317
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaaga-aatgtgaaaaaa 86  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||| ||||||| ||||||||||||| | ||||||||||||    
T  10602236 caaaagacaatttagtaatattaacacacaaaatagacaaattaattacactaccaacttttcttaaaagaatgtgaaaaaa 10602317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 33246527 - 33246626
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||| ||||| |||||||||||||| ||||||||||  |||| ||||||||||||||||||||| ||||||| |||| | |||| ||| ||||||||    
T  33246527 caaaggataatttggtaatattaacacacaaaatagacattttaattacactaacaacttttcttaaaaaatgtggaaaaggtaaag-gagtttacatat 33246625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 46729377 - 46729302
Alignment:
Q  9 aggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||| |||||||||||||| |||| ||||||||||| |||||| |||||||||||||| ||||||||||||    
T  46729377 aggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaa-aaatgtgaaaaa 46729302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 48472526 - 48472605
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttctt-aagaaatgtgaaaaa 85  Q
    |||||| ||||| |||||||||||||| |||||||||||||||| |||||| |||||||||||| || ||||||||||||    
T  48472526 aaaggataatttcgtaatattaacacacaaaatagacacattaattacactgacaacttttcttaaaaaaatgtgaaaaa 48472605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 3684226 - 3684312
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggtta 100  Q
    |||||| ||||||||| ||| |||||||||||||||| |||||  ||||  |||||||| ||||||||||||||||||| |||||||    
T  3684226 aatttaataatattaatacacaaaatagacacattaattacaccgacaatctttcttaataaatgtgaaaaaagcaaagggaggtta 3684312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 24072845 - 24072763
Alignment:
Q  3 aagcaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||| ||||||||  ||||||||||||| |||| ||||||||||| |||| | ||||||||||||||||||||| |||||    
T  24072845 aagcaaatgacaatttcataatattaacacaaaaaacagacacattaattacattgacaacttttcttaagaaatgtaaaaaa 24072763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 51787837 - 51787767
Alignment:
Q  15 atttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||||||||| |||| ||||||||||| |||||  |||||||||||||||||||||||||||    
T  51787837 atttcgtaatattaacacacaaaacagacacattaattacaccgacaacttttcttaagaaatgtgaaaaa 51787767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 16070498 - 16070427
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||| |||||||||||||| |||| ||||||||||| |||||| ||| | |||||||||||||||||||||    
T  16070498 aatttggtaatattaacacacaaaacagacacattaattacactgacagcatttcttaagaaatgtgaaaaa 16070427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 41945803 - 41945881
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||| ||||||||| ||||||||| | ||||||||| |||||| |||| ||||||||| ||||||||||||    
T  41945803 caaaggacaatttcgtaatattatcacataaaaca-acacattaattacactgacaatttttcttaaaaaatgtgaaaaa 41945881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 52226094 - 52226015
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||  ||||||||||| |||||| ||||||||||| || ||| ||||| |||||||| ||||||||||||    
T  52226094 caaaggacaatttgataatattaacatataaaacagacacattaattatactgacaacatttcttaaaaaatgtgaaaaa 52226015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 20293822 - 20293703
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaacta----cactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttac 101  Q
    |||| ||||||| |||||||||| || | |||||| ||||||||| ||    |||| ||||||||||||||||||||||||||||||||||  |  |||     
T  20293822 caaaagacaattcagtaatattagcataaaaaatatacacattaattaattacactgacaacttttcttaagaaatgtgaaaaaagcaaaggaaatttag 20293723  T
Q  102 atatagggatggagggagta 121  Q
    |||||| || ||||||||||    
T  20293722 atatagagacggagggagta 20293703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 722416 - 722352
Alignment:
Q  57 taacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagta 121  Q
    |||||||||||||||| ||||||||||||||||||  | ||||| |||||||||||||| |||||    
T  722416 taacaacttttcttaaaaaatgtgaaaaaagcaaaagggggttatatatagggatggagagagta 722352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 754502 - 754565
Alignment:
Q  57 taacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagta 121  Q
    |||||||||||||||| |||||||||||||||||| || ||||| |||||||||||||| |||||    
T  754502 taacaacttttcttaaaaaatgtgaaaaaagcaaa-aggggttatatatagggatggagagagta 754565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 5448737 - 5448653
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||| ||||| |||||||||||||| |||| ||||||||||| || | | | ||| ||||||||||||||||||||| ||||    
T  5448737 caaaggataatttcgtaatattaacacacaaaacagacacattaattatattgataacatttcttaagaaatgtgaaaaaggcaa 5448653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 5932961 - 5932882
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| ||||||||  ||||||||||||| |||| | ||||||||| |||||| |||||||||||||| |||||||||||||    
T  5932961 caaatgacaatttgataatattaacacacaaaacaaacacattaattacactgacaacttttcttaa-aaatgtgaaaaaa 5932882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 39414296 - 39414196
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagt 120  Q
    ||||||||||||| |||||||||| ||||| | || || |||||||||||||||||| ||||||||| |||    ||||| |||||||||  ||||||||    
T  39414296 taatattaacacacaaaatagacatattaattgcattatcaacttttcttaagaaatatgaaaaaagtaaaacagggttatatatagggacagagggagt 39414197  T
Q  121 a 121  Q
    |    
T  39414196 a 39414196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 5168054 - 5167940
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||| |||||||||||||||||||| || |||| ||||| ||||| |||||  | ||| ||| |||| |||| ||||||| |||||  ||||||||||||    
T  5168054 caaatgacaatttagtaatattaacgcacaaaacagacatattaattacaccgaaaac-tttattaaaaaatatgaaaaatgcaaaaggaggttacatat 5167956  T
Q  106 agggatggagggagta 121  Q
    ||||| |||| |||||    
T  5167955 agggacggagagagta 5167940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 5536564 - 5536493
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||| ||| |||||||||  |||| ||||||||||| |||||| |||| ||||||||||||||||||||||    
T  5536564 aatttcgtagtattaacacgcaaaacagacacattaattacactgacaatttttcttaagaaatgtgaaaaa 5536493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 20791988 - 20791929
Alignment:
Q  20 gtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgt 79  Q
    |||||||||||||| |||||||||| ||||| | ||||| ||||||||||||||||||||    
T  20791988 gtaatattaacacacaaaatagacatattaattgcactaccaacttttcttaagaaatgt 20791929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 45628105 - 45628184
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttctt-aagaaatgtgaaaaa 85  Q
    ||||| |||||| |||||||||| ||| |||| |||||||| || ||||||||||||||||||| || ||||||||||||    
T  45628105 aaagggcaatttggtaatattaatacacaaaacagacacatcaattacactaacaacttttcttaaaaaaatgtgaaaaa 45628184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 52977621 - 52977551
Alignment:
Q  16 tttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag 87  Q
    |||| ||||||||||||||||||||||||||| || | || ||||||||||| ||||| |||||||||||||    
T  52977621 tttaataatattaacacataaaatagacacatgaattgcattaacaactttttttaag-aatgtgaaaaaag 52977551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 52552541 - 52552619
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    ||||||| ||||| ||||||||||||||||||  ||||| ||| | |||||| |||||||||||||| ||| |||||||    
T  52552541 caaaggataatttggtaatattaacacataaagcagacaaatttattacactgacaacttttcttaaaaaacgtgaaaa 52552619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 54438584 - 54438506
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||| ||||| |||||||||||||| |||| |||||| |||| || ||  |||| ||||||||||||||||||||||    
T  54438584 aaaggataatttcgtaatattaacacacaaaacagacactttaattatacggacaatttttcttaagaaatgtgaaaaa 54438506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 30049477 - 30049420
Alignment:
Q  35 aaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    |||||||||||||||| ||||||||  ||||||||||| |||||||||||||| ||||    
T  30049477 aaaatagacacattaattacactaatcacttttcttaaaaaatgtgaaaaaagtaaag 30049420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 31840171 - 31840094
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||||| |||| | |||  |||| ||||||||||| |||||||||||||| |||||||    
T  31840171 caaatgacaatttggtaatattaacacacaaaaaataca--ttaattacactaacaatttttcttaagaaatttgaaaaa 31840094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 45079856 - 45079920
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||| |||||||| |  |||| | ||||||| ||||||||||||||||||||||||    
T  45079856 taatattaacacacaaaatagatatgttaattgcactaactacttttcttaagaaatgtgaaaaa 45079920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 31937422 - 31937485
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttct 69  Q
    |||| ||||||||| ||||||||||||| |||| ||||||||||| |||| | |||||||||||    
T  31937422 caaatgacaatttaataatattaacacacaaaacagacacattaattacagtgacaacttttct 31937485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 54359741 - 54359690
Alignment:
Q  24 tattaacacataaaatagacacattaactacactaacaacttttcttaagaa 75  Q
    ||||||||||||||| ||||||||||| || ||| |||||||||||||||||    
T  54359741 tattaacacataaaacagacacattaattatactgacaacttttcttaagaa 54359690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 10541287 - 10541365
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    ||||||| ||||| |||||||||| ||| |||||| | ||||||| | || |||||||||||||| |||||||| ||||    
T  10541287 caaaggataatttggtaatattaatacacaaaatatatacattaattgcattaacaacttttctttagaaatgtaaaaa 10541365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 20016598 - 20016520
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||| ||||| |||||||||||| | ||||||||||  |||| | ||||||| || |||||||| |||||||||||||    
T  20016598 caaaggaaaatttggtaatattaacatacaaaatagaca--ttaattgcactaactacctttcttaaaaaatgtgaaaaaa 20016520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 43509156 - 43509078
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| ||||||||  ||||||||||||| |||| | ||||||||| ||||| | |||| ||||||||||||||||||||||    
T  43509156 caaaagacaatttgataatattaacacacaaaaca-acacattaattacacga-caacgtttcttaagaaatgtgaaaaaa 43509078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 18683563 - 18683634
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaat 77  Q
    |||||||||| || ||||||||||| || |||||| ||||||||| |  | ||||||||||| |||||||||    
T  18683563 caaaggacaagttggtaatattaacgcacaaaataaacacattaattgtattaacaactttttttaagaaat 18683634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 43800883 - 43800832
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacact 57  Q
    ||||||||||||| |||||||||||||| |||| |||||| |||| ||||||    
T  43800883 caaaggacaatttggtaatattaacacacaaaacagacaccttaattacact 43800832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 56217102 - 56217137
Alignment:
Q  55 actaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||||||||||||||||| |||||||||||||||||    
T  56217102 actaacaacttttcttaaaaaatgtgaaaaaagcaa 56217137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 28175869 - 28175783
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa-agcaaagagaggttacatata 106  Q
    ||||||| ||||||||||||||||  |||| |  ||||| |||||||| ||| |||| ||||||| |  ||||||||||||||||||    
T  28175869 taatattcacacataaaatagacatgttaattgtactaataacttttcataaaaaatatgaaaaagataaaagagaggttacatata 28175783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 31294225 - 31294155
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 82  Q
    ||||| |||||| ||| ||||| ||| ||||||||| ||| |||||| ||||||||||||| || ||||||    
T  31294225 acaatgtagtaaaatttacacacaaactagacacatgaacaacactatcaacttttcttaataagtgtgaa 31294155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 50438892 - 50438946
Alignment:
Q  31 acataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||  ||||||||||||| |||  ||||| |||||||||||||||||||||    
T  50438892 acataaatcagacacattaactgcacagacaacatttcttaagaaatgtgaaaaa 50438946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 23928401 - 23928329
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||||||||||  |||||| ||||||||| | |||||||   |||| |||| ||||||||||||    
T  23928401 acaatttagtaatattaacacgcaaaataaacacattaattgcactaacttttttttttaa-aaatgtgaaaaa 23928329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 32236891 - 32236822
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||||||||| |||| ||||| ||||| |||||| ||||| ||||| || |||| |||| |||||||    
T  32236891 taatattaacacacaaaacagacatattaattacactgacaacatttctaaaaaaatatgaataaagcaa 32236822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 32866542 - 32866477
Alignment:
Q  43 cacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagg 108  Q
    |||||||| |||||  ||||||||||||||||||||||| ||| |||||| |   |||||||||||    
T  32866542 cacattaattacaccgacaacttttcttaagaaatgtgagaaatgcaaaggggacttacatatagg 32866477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 26186785 - 26186865
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| ||||||||  ||||||||||||| |||||| | |  |||| | ||||||||| | || ||||||||||||||||||    
T  26186785 caaatgacaatttgataatattaacacacaaaataaatatcttaattgcactaacaattattattaagaaatgtgaaaaaa 26186865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 7e-40; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 23876112 - 23875997
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| ||  ||||||||    
T  23876112 caaaagacaatttagtaatattaacacataaaatggacatattaactacactaacaactttttttaagaaatgtgaaaaaagcaaagggaatttacatat 23876013  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  23876012 agggacggagggagta 23875997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 20123525 - 20123410
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||||||||||||  ||||||||||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| ||||||||    
T  20123525 caaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaaagggagtttacatat 20123426  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||| ||||    
T  20123425 agggacggaggaagta 20123410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 31373728 - 31373843
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | | ||||||| |||||||||||||||||||||| ||||| || | ||| ||||    
T  31373728 caaaggacaatttagtaatattaacacacaaaatagacacattaattgccctaacaatttttcttaagaaatgtgaaaaatgcaaaaagtgcttagatat 31373827  T
Q  106 agggatggagggagta 121  Q
    ||||||||||||||||    
T  31373828 agggatggagggagta 31373843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 37491649 - 37491760
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||| ||||| |||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||  ||||||||    
T  37491649 caaaggataatttggtaatattaacatataaaatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaaagtaaagagaacttacatat 37491748  T
Q  106 agggatggaggg 117  Q
    ||| | ||||||    
T  37491749 aggaacggaggg 37491760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 21388317 - 21388200
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||||||||||||||||||||||||||| |||| ||||||||||| |||||  |||| ||||||||||||||||||||||||||||||||| ||| ||      
T  21388317 caaaggacaatttagtaatattaacacacaaaacagacacattaattacaccgacaaattttcttaagaaatgtgaaaaaagcaaagagagtttaaatta 21388218  T
Q  106 agggatggagggagtagt 123  Q
    ||||| ||||| ||||||    
T  21388217 agggacggaggaagtagt 21388200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 26632913 - 26632836
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  26632913 aatttagtaatattaacacataaaatagacacattaactacactaacaatttttcttaaaaaatgtgaaaaaagcaaa 26632836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 123
Target Start/End: Original strand, 2276607 - 2276724
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||| |||||||||||||| |||| ||||| |||||||||||| ||||||||| ||||||||||||||||| | |||  ||| ||||||      
T  2276607 caaaggacaatttggtaatattaacacacaaaacagacaaattaactacactgacaacttttgttaagaaatgtgaaaaatgtaaaaggagtttacatta 2276706  T
Q  106 agggatggagggagtagt 123  Q
    ||||| ||||||||||||    
T  2276707 agggacggagggagtagt 2276724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 18122072 - 18122151
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||| |||||| |||||||||||||||||||||||||||    
T  18122072 caaaggaaaatttagtaatattaacacataaaacagacacactaattacactcacaacttttcttaagaaatgtgaaaaa 18122151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 27213562 - 27213483
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||||||||||||||||| |||||||||| ||||  | ||||||||||||||||||||||||||||||||    
T  27213562 caaaggacaatttagtaatattaacacacaaaatagacatattagttgcactaacaacttttcttaagaaatgtgaaaaa 27213483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 48193690 - 48193575
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||| |||||| | | |||||||     
T  48193690 caaaggataatttggtaatattaacacacaaaatagacacattaattacactaacaatttttcttaaaaaatgtgaaaaatgcaaagggggcttacatac 48193591  T
Q  106 agggatggagggagta 121  Q
    | ||| ||||| ||||    
T  48193590 atggacggaggtagta 48193575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 6376163 - 6376244
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag 87  Q
    |||| ||||||||||||||||||||||| |||| ||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  6376163 caaatgacaatttagtaatattaacacacaaaacagagacattaattacactaacaatttttcttaagaaatgtgaaaaaag 6376244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 10685160 - 10685079
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag 87  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| |||||| | ||||||||||||||||| |||||||||    
T  10685160 caaaggacaatttcgtaatattaacacataaaacagacacattaattacactgataacttttcttaagaaatatgaaaaaag 10685079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 40741017 - 40740909
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatgg 113  Q
    ||||| |||||||||||||| |||||||||| ||||| |||| ||||||||||||||||||||||||| |||||  || || ||||| ||||||||| ||    
T  40741017 aatttggtaatattaacacacaaaatagacatattaattacattaacaacttttcttaagaaatgtga-aaaagataaaaggggttatatatagggacgg 40740919  T
Q  114 agggagtagt 123  Q
    ||||||||||    
T  40740918 agggagtagt 40740909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 29636077 - 29636185
Alignment:
Q  13 caatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatg 112  Q
    |||||| |||||||||||||| |||| ||||||||||| |||| | |||||||||||||| ||||||| |||| |||||| | | ||||||||||||| |    
T  29636077 caatttggtaatattaacacacaaaacagacacattaattacattgacaacttttcttaaaaaatgtgtaaaatgcaaagggggtttacatatagggacg 29636176  T
Q  113 gagggagta 121  Q
    |||||||||    
T  29636177 gagggagta 29636185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 48767639 - 48767555
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| ||| ||||||||||||||||||||||    
T  48767639 caaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacgttttttaagaaatgtgaaaaaagcaa 48767555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 19236097 - 19236211
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||| ||||| | |||||||||||| | ||||  |||||||||| |||||||||||||||||||| ||||||||||||| | ||| || |||||||| |    
T  19236097 caaagaacaatatggtaatattaacatacaaaaccgacacattaattacactaacaacttttcttacgaaatgtgaaaaatgaaaaaag-ggttacattt 19236195  T
Q  106 agggatggagggagta 121  Q
    ||||||||||||||||    
T  19236196 agggatggagggagta 19236211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 20124255 - 20124148
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatgg 113  Q
    ||||||||||| | || |||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||  | | ||||||  ||||| ||    
T  20124255 aatttagtaatgtcaatacataaaatagacacattaattacaccaacaacttttcttaaaaaatgtgaaaaaagcaaaaggggcttacattaagggacgg 20124156  T
Q  114 agggagta 121  Q
    ||||||||    
T  20124155 agggagta 20124148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 21809677 - 21809756
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||||||||||||||||| |||| ||||||||||| ||||   |||||||||||||||||||||||||||    
T  21809677 caaaggacaatttagtaatattaacacaaaaaacagacacattaattacatcgacaacttttcttaagaaatgtgaaaaa 21809756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 46783871 - 46783950
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||| | |||||| |||||||||||||||||||||||||    
T  46783871 caaaagacaatttggtaatattaacacataagatagacacattaatttcactaataacttttcttaagaaatgtgaaaaa 46783950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 25750443 - 25750355
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagag 94  Q
    |||| |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||||||| |||||||||||||||||  |||||||    
T  25750443 caaatgacaattttgtaatattaacacacaaaacagacacattaattacactgacaactttttttaagaaatgtgaaaaatacaaagag 25750355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 4089538 - 4089609
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||| |||||||||||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  4089538 aatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaa 4089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 21801091 - 21801166
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||||||||||||||||||| |||| ||||||||||| ||||   ||||||||||||||||||||||||||||    
T  21801091 gacaatttagtaatattaacacacaaaacagacacattaattacatcgacaacttttcttaagaaatgtgaaaaaa 21801166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 36116396 - 36116317
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||| |||||  ||||| |||||||||||||||||||||    
T  36116396 caaatgacaatttcgtaatattaacacataaaacagacacattaattacaccgacaacatttcttaagaaatgtgaaaaa 36116317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 37048110 - 37048030
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||||||||| | || ||||||||| |||| ||||||||||| |||||| | ||||||||||||||||||||||||||    
T  37048110 caaaggacaatttgggaacattaacacacaaaacagacacattaattacactgataacttttcttaagaaatgtgaaaaaa 37048030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 49100746 - 49100662
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| |||||| ||||||| | |||||| ||| |||||| ||||    
T  49100746 caaaggacaatttcgtaatattaacacataaaacagacacattaattacactgacaacttattttaagagatgcgaaaaaggcaa 49100662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 37673812 - 37673733
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| ||||||||  ||||||||||||| |||| ||||||||||| |||||| ||||| |||||||||||||||||||||    
T  37673812 caaaagacaatttcataatattaacacacaaaacagacacattaattacactcacaacatttcttaagaaatgtgaaaaa 37673733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 21753502 - 21753431
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagag 94  Q
    ||||||||||||||||  ||||||| ||||||| |||||| |||||| ||||||||||||||||||||||||||    
T  21753502 taatattaacacataa--tagacacgttaactaaactaaccacttttattaagaaatgtgaaaaaagcaaagag 21753431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 1324783 - 1324666
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||| ||||||||  ||| ||||||||| |||| ||||||||||| |||||| | ||| ||||||||||||||||||||| |||| ||| || |||||      
T  1324783 caaatgacaatttgataagattaacacacaaaacagacacattaattacactgataacatttcttaagaaatgtgaaaaaggcaatgagtggatacatta 1324684  T
Q  106 agggatggagggagtagt 123  Q
    |||||  |||||||||||    
T  1324683 agggacagagggagtagt 1324666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 28663815 - 28663716
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagt 120  Q
    ||||||||||||| |||||||||||||||| |  | |||||||||| |||||||||||||||||||   || || ||||| ||||||||| |||||||||    
T  28663815 taatattaacacacaaaatagacacattaattgtattaacaacttt-cttaagaaatgtgaaaaaaaacaaaaggggttatatatagggacggagggagt 28663717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 36726203 - 36726287
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||| |||||||||||| | |||||||| ||| |||||| ||||    
T  36726203 caaaggacaatttggtaatattaacacacaaaacaaacacattaattacactaacaacatctcttaagagatgcgaaaaaggcaa 36726287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 48610166 - 48610250
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| |||||||| |||||||||| ||| |||| ||||||||||| |||| | |||||||||||||| |||||||||||| ||||    
T  48610166 caaaagacaatttcgtaatattaatacacaaaacagacacattaattacagtgacaacttttcttaaaaaatgtgaaaaatgcaa 48610250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 26201013 - 26201111
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa-gcaaagagaggttacatatagggatggaggga 118  Q
    ||||||||| ||| |||||||||||| ||| | |||||| ||||||||||||||||| |||||||| ||||||   | ||||||||||||| |||||||    
T  26201013 taatattaatacacaaaatagacacaataattgcactaataacttttcttaagaaatatgaaaaaatgcaaaggatgcttacatatagggacggaggga 26201111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 40211312 - 40211386
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||| |||||||||||||| |||| ||||||||||| ||||| ||||| ||||||||| |||| |||||||    
T  40211312 gacaatttcgtaatattaacacacaaaacagacacattaattacacaaacaatttttcttaaaaaatatgaaaaa 40211386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 41672597 - 41672662
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttctta 71  Q
    ||||||| |||||||| ||||| ||||| |||||||||||||||| ||||||||||| ||||||||    
T  41672597 caaaggataatttagttatattcacacacaaaatagacacattaattacactaacaagttttctta 41672662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 42993233 - 42993298
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||||||||||||||||||||| |||| |  | ||||||||||||||||||||||| ||||||    
T  42993233 taatattaacacataaaatagacacgttaattgtattaacaacttttcttaagaaatgtaaaaaaa 42993298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 35128459 - 35128382
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||  ||||||||||||| |||| ||||| ||||| |||||| |||||||||||||  ||||||||||||    
T  35128459 caaaggacaatttcataatattaacacacaaaacagacatattaattacactgacaacttttctta--aaatgtgaaaaa 35128382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 29993042 - 29992979
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaat 77  Q
    ||||| ||| |||||||| | |||||||||||||||| | ||||||||||||||||||||||||    
T  29993042 aatttggtagtattaacatacaaaatagacacattaattgcactaacaacttttcttaagaaat 29992979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 35960445 - 35960374
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||| || |||||||||||||||||||| |  |||||||| |||| ||||| |||||||||||    
T  35960445 aatttagtaatataaatacataaaatagacacattaattgtactaacaattttttttaaggaatgtgaaaaa 35960374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 40263786 - 40263707
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| ||||||||||||   |||| ||||||||||| |||||  |||||||||||||| ||||||||||||    
T  40263786 caaatgacaattttgtaatattaacaatcaaaacagacacattaattacaccgacaacttttcttaaaaaatgtgaaaaa 40263707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 10595146 - 10595212
Alignment:
Q  25 attaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    ||||||||| |||| ||||| ||||| || ||| ||||||||||||||||||||||||||| |||||    
T  10595146 attaacacacaaaacagacatattaattatactgacaacttttcttaagaaatgtgaaaaacgcaaa 10595212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 19477452 - 19477525
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||| |||| ||||||| |||||||| || |||||| ||||||||||||||||||||| |||||| ||||||    
T  19477452 acaatttggtaacattaacatataaaataaacgcattaattacactaacaacttttcttaa-aaatgtaaaaaaa 19477525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 21752595 - 21752517
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    ||||| ||||||||||| || |||||| ||| ||||| | |||||||||||||| |||||||||||| |||| ||||||    
T  21752595 aatttggtaatattaacccacaaaataaacaaattaattgcactaacaactttttttaagaaatgtggaaaatgcaaag 21752517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 33181370 - 33181285
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||| |||||||| |||||||||| | | |||| | |||||||||||||||| ||||| ||| ||||||||| ||||||| |||||    
T  33181370 caaatgacaatttggtaatattaatatacaaaacaaacacattaactacactgacaacattttttaagaaatatgaaaaatgcaaa 33181285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 27162934 - 27163011
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| | |||||||| ||| ||||||  |||||||| | ||||||||||||| ||||||||||||||||||    
T  27162934 caaatgacaatttggcaatattaaaacacaaaata--cacattaattgcactaacaactttacttaagaaatgtgaaaaa 27163011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 27170080 - 27170008
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||| ||||||||| |||| |||||||||| ||||| | ||||||||  || |||||||||||||||||||    
T  27170080 acaatttggtaatatta-cacacaaaatagacaaattaattgcactaacatgttgtcttaagaaatgtgaaaaa 27170008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 42983649 - 42983725
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaac--ttttcttaagaaatgtgaaaaa 85  Q
    ||||||||| ||||||||||| |||||| ||||||||||| ||||| | ||||  |||||| |||||| ||||||||    
T  42983649 gacaatttaataatattaacatataaaagagacacattaattacaccatcaacttttttctcaagaaacgtgaaaaa 42983725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 36195453 - 36195393
Alignment:
Q  19 agtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgt 79  Q
    ||||||||| | ||| |||||||||||||||| || |||||||| |||||| |||||||||    
T  36195453 agtaatatttatacacaaaatagacacattaattatactaacaatttttctaaagaaatgt 36195393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 43601195 - 43601270
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 82  Q
    ||||||||||||| |||||| | ||| | |||| |||||| | || |||| ||||||||||||||||||||||||||    
T  43601195 caaaggacaattttgtaatacttaca-acaaaacagacacctcaattacattaacaacttttcttaagaaatgtgaa 43601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 21392931 - 21393038
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatgg 113  Q
    ||||| |||||||||||||  |||||||||||||||| | ||||||||| ||||   || |||| ||||||| | || ||| | ||||||| ||| | ||    
T  21392931 aatttggtaatattaacactcaaaatagacacattaattgcactaacaaatttttaaaaaaaatatgaaaaatgtaatgagtgcttacatagaggtacgg 21393030  T
Q  114 agggagta 121  Q
    ||||||||    
T  21393031 agggagta 21393038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 17772530 - 17772580
Alignment:
Q  13 caatttagtaatattaacacataaaatagacacattaactacactaacaac 63  Q
    ||||||||||| ||||| ||| ||| |||||||||||||||||||| ||||    
T  17772530 caatttagtaaaattaatacaaaaactagacacattaactacactatcaac 17772580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 25098963 - 25099053
Alignment:
Q  31 acataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagta 121  Q
    |||||||  ||||||||||||| |||  ||||| ||| ||||||||||||||||| |||| | | ||||| ||  ||||| ||||||||||    
T  25098963 acataaatcagacacattaactgcacagacaacattttttaagaaatgtgaaaaatgcaatggggggttatattaagggacggagggagta 25099053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 25828188 - 25828130
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaa 72  Q
    ||||| |||||||||||||| ||||||| || ||||| |  ||||||||||||||||||    
T  25828188 aatttcgtaatattaacacacaaaataggcatattaattttactaacaacttttcttaa 25828130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 10408598 - 10408663
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttctta 71  Q
    |||||||||| ||||||| ||| ||||| ||| ||||||||||| |||||||| ||  ||||||||    
T  10408598 caaaggacaaattagtaaaattcacacacaaactagacacattatctacactaccacgttttctta 10408663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 34118143 - 34118098
Alignment:
Q  46 attaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    ||||| |||||  ||||||||||||||||||| |||||||||||||    
T  34118143 attaattacaccgacaacttttcttaagaaatatgaaaaaagcaaa 34118098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 5334439 - 5334491
Alignment:
Q  20 gtaatattaacacataaaatagacacattaactacactaacaacttttcttaa 72  Q
    |||||||||||| | |||| | ||||||||| ||||||||||| |||||||||    
T  5334439 gtaatattaacatacaaaacaaacacattaattacactaacaatttttcttaa 5334491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 1943 - 2058
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||     
T  1943 caaaggataatttggtaatattaacacacaaaatagacacattaattacactaacaacttatcttaagaaatgtgaaaaaagcaaagggaggttacatac 2042  T
Q  106 agggatggagggagta 121  Q
    |||||  |||||||||    
T  2043 agggacagagggagta 2058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 46435762 - 46435877
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| | | ||||||||    
T  46435762 caaaggacaatttggtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaaagggggtttacatat 46435861  T
Q  106 agggatggagggagta 121  Q
     |||| ||||||||||    
T  46435862 tgggacggagggagta 46435877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 20945332 - 20945447
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||  | | ||||||||    
T  20945332 caaaggataattaggtaatattaacacataaaatagacacattaattacactaacaacttttcttaagaaatgtgaaaaatgtaaaaggtgtttacatat 20945431  T
Q  106 agggatggagggagta 121  Q
    ||||| || |||||||    
T  20945432 agggacggtgggagta 20945447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 52325535 - 52325633
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacata 104  Q
    |||||||||||||  |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||| |||||||| | |||||||    
T  52325535 caaaggacaatttgataatattaacacataaaatagacacattaattacactaacattttttcttaagaaatgtgaaaaatgcaaagagtgcttacata 52325633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 31531457 - 31531561
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||| ||||||||  |||||| |||||| |||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||| || ||||||||||    
T  31531457 caaaagacaatttgataatatcaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaaaaaggggttacatat 31531556  T
Q  106 aggga 110  Q
    |||||    
T  31531557 aggga 31531561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 14645927 - 14646006
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    ||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  14645927 acaatttggtaatattaacacacaaaatagacacattaattacactaacaacttttcttaaaaaatgtgaaaaaagcaaa 14646006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 26517248 - 26517350
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatata 106  Q
    |||||||||||| |||||||||||||| |||| ||||||||||| |||||| ||||||||||||||||||||||||||| |||||| ||  ||||||| |    
T  26517248 aaaggacaatttggtaatattaacacagaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaatgcaaagggaacttacataga 26517347  T
Q  107 ggg 109  Q
    |||    
T  26517348 ggg 26517350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 11388189 - 11388080
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggat 111  Q
    ||||||| |||||||||||||  |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||  | | ||| |||||||||     
T  11388189 acaatttggtaatattaacacgcaaaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaaagcaaaatgggattatatatagggac 11388090  T
Q  112 ggagggagta 121  Q
    | ||||||||    
T  11388089 gaagggagta 11388080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 44338160 - 44338041
Alignment:
Q  1 agaagcaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggtta 100  Q
    |||| ||||||||||||| |||||||||||||| ||| |||||| ||||||||||||||||||||||||||| ||||||||||| | ||||  | | |||    
T  44338160 agaaacaaaggacaatttggtaatattaacacaaaaattagaca-attaactacactaacaacttttcttaaaaaatgtgaaaataacaaaaggggttta 44338062  T
Q  101 catatagggatggagggagta 121  Q
    ||||||||||  |||||||||    
T  44338061 catatagggacagagggagta 44338041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 25750601 - 25750486
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||| |||| || |||||||||||||| |||||||||| ||||| |||| ||||||| ||||||||||||||| |||||||||||| ||| |||||||     
T  25750601 caaagaacaagttggtaatattaacacacaaaatagacaaattaattacattaacaacctttcttaagaaatgtaaaaaaagcaaagggagcttacatac 25750502  T
Q  106 agggatggagggagta 121  Q
    |||||  |||||||||    
T  25750501 agggacagagggagta 25750486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 51263156 - 51263077
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||| |||| |||||||||||||||||    
T  51263156 caaaggacaatttagtaatactaacacataaaacagacacattaattacactaacaattttttttaagaaatgtgaaaaa 51263077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 33287940 - 33287859
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag 87  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||| |||||||  |||||||||||||||||||||||||||    
T  33287940 caaaggacaatttaataatattaacacacaaaatagacaaattaattacactacaaacttttcttaagaaatgtgaaaaaag 33287859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 46048596 - 46048515
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag 87  Q
    ||||||||||||| |||||||||| ||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||||    
T  46048596 caaaggacaatttcgtaatattaatacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaag 46048515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 50363101 - 50363004
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacat 103  Q
    |||| |||||||| |||||||||| |||||||| ||||| ||||| |||||| |||| ||||||||| ||||||||||||| ||||||||||||||||    
T  50363101 caaatgacaatttggtaatattaatacataaaacagacatattaattacactgacaatttttcttaaaaaatgtgaaaaaaacaaagagaggttacat 50363004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 30476115 - 30476031
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||| |||||| |||||||||||||| |||||||||||| ||||    
T  30476115 caaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaaaaaatgtgaaaaaggcaa 30476031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 42010927 - 42010827
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggagt 120  Q
    ||||||||||||| |||||||||||||||| |||| |||||| ||||||||||||||||||||||| ||||  ||| ||| ||| ||||| |||||||||    
T  42010927 taatattaacacacaaaatagacacattaattacattaacaaattttcttaagaaatgtgaaaaaaacaaaaggagattatatacagggacggagggagt 42010828  T
Q  121 a 121  Q
    |    
T  42010827 a 42010827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 27638109 - 27638188
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||  ||||||||||||| |||||||| ||||||| |||||||| |||||||||||||||||||||||||    
T  27638109 caaaggacaattttataatattaacacacaaaatagagacattaattacactaataacttttcttaagaaatgtgaaaaa 27638188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 29676776 - 29676855
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| ||||||| ||||    
T  29676776 gacaatttcgtaatattaacacataaaatagacacattaattacactgacaatttttcttaagaaatatgaaaaaggcaa 29676855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 31819480 - 31819401
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| |||||  | |||||||||||||||||||||||||    
T  31819480 caaaggacaatttcgtaatattaacacataaaacagacacattaattacaccgataacttttcttaagaaatgtgaaaaa 31819401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 41727271 - 41727354
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||||||||||| |||||||||||||| |||| ||||||||||| |||||| ||||||||| ||||||||||||||||| ||||    
T  41727271 aaaggacaattttgtaatattaacacacaaaacagacacattaattacactgacaactttttttaagaaatgtgaaaaaggcaa 41727354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 41825177 - 41825283
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatgg 113  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||| |||| |||||  | | ||| ||||||||||||    
T  41825177 aatttggtaatattaacacataaaatagacacattaattacactgacaacttttcttaagaagtgtg-aaaatgcaaaaggtgcttaaatatagggatgg 41825275  T
Q  114 agggagta 121  Q
     |||||||    
T  41825276 tgggagta 41825283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 42891493 - 42891378
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||| ||| |||||||||||||| |||| ||||| ||||| || |||||||||||||||||||||||||||||||  ||||||| | |||||||     
T  42891493 caaaggacagtttggtaatattaacacacaaaacagacaaattaattatactaacaacttttcttaagaaatgtgaaaaatacaaagagggtttacataa 42891394  T
Q  106 agggatggagggagta 121  Q
    | ||  ||||||||||    
T  42891393 atgggcggagggagta 42891378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 26121406 - 26121308
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacata 104  Q
    |||||||||||||  ||||||||||||| |||| | ||||||||| |||||| ||||||||||||||||||||| ||||| ||||| |||| |||||||    
T  26121406 caaaggacaatttgataatattaacacacaaaacaaacacattaattacactgacaacttttcttaagaaatgtaaaaaatgcaaaaagagcttacata 26121308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 11344624 - 11344547
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    ||||| ||||| |||||||| |||||||||||||||| ||||| || |||||||||||||||||||||||||||||||    
T  11344624 aatttggtaatgttaacacacaaaatagacacattaattacaccaataacttttcttaagaaatgtgaaaaaagcaaa 11344547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 26043093 - 26042976
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||| |||| ||||||||| |||| ||||| ||||| |||||| |||| |||||||||||||||| ||||| | |||||| |||||||||     
T  26043093 caaaggacaatttggtaacattaacacacaaaacagacatattaattacactgacaatttttcttaagaaatgtaaaaaatgtaaagaggggttacataa 26042994  T
Q  106 agggatggagggagtagt 123  Q
    | ||| |||| |||||||    
T  26042993 aaggaaggagagagtagt 26042976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 12077775 - 12077859
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||||||||||||||||| ||||||| ||||    
T  12077775 caaatgacaattttgtaatattaacacacaaaagagacacattaattacactgacaacttttcttaagaaatttgaaaaatgcaa 12077859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 29645432 - 29645352
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| |||||||| ||||||||||||||||||| ||| ||||||| |||||||||||| |||||||| |||||||||||||    
T  29645432 caaatgacaatttcgtaatattaacacataaaacagatacattaattacactaacaacatttcttaataaatgtgaaaaaa 29645352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 27047210 - 27047288
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    |||| |||||||| |||||||||||||| |||||||||||||||| | |||||||| ||||||||||| ||||||||||    
T  27047210 caaaagacaatttggtaatattaacacacaaaatagacacattaattgcactaacagcttttcttaaggaatgtgaaaa 27047288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 40645748 - 40645664
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||| |||||||| |||||||||||||| |||| ||||||||||| |||||  ||||| ||||||||||||||||||||| ||||    
T  40645748 caaaagacaatttggtaatattaacacacaaaacagacacattaattacacagacaacatttcttaagaaatgtgaaaaaggcaa 40645664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 11393991 - 11393916
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||||  || |||||||||| |||||||||||||||| |||||||||||||||| |||| |||||||||||||    
T  11393991 gacaatttgatagtattaacacacaaaatagacacattaattacactaacaactttttttaaaaaatgtgaaaaaa 11393916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 31650702 - 31650797
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatata 106  Q
    |||||||| ||||||||| ||||||||||||||||||||| | || |||||| |||| |||| |||||||||||| |||||| | | |||||||||    
T  31650702 gacaatttggtaatattaccacataaaatagacacattaattgcattaacaattttttttaataaatgtgaaaaatgcaaagggtgcttacatata 31650797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 22659646 - 22659537
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagagg--ttacatatagggat 111  Q
    ||||| |||||||||||||| |||||| | ||||||| || ||||||||||||||||||||||||| ||||||  ||| |  ||  ||||||||||||||    
T  22659646 aatttggtaatattaacacacaaaataaatacattaattatactaacaacttttcttaagaaatgtaaaaaaaaaaaaaaagggatttacatatagggat 22659547  T
Q  112 ggagggagta 121  Q
    |||| |||||    
T  22659546 ggagagagta 22659537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 37729076 - 37729141
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||||||||| |||||||||||||||| || | |||||| |||||||||||||||||||||||    
T  37729076 taatattaacacacaaaatagacacattaattatattaacaatttttcttaagaaatgtgaaaaaa 37729141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 13084398 - 13084470
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||| |||||||||||||| |||| ||||||||||| || ||| ||||||||||||||||||| ||||||||    
T  13084398 aatttggtaatattaacacacaaaacagacacattaattatactgacaacttttcttaagaaatatgaaaaaa 13084470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 41740005 - 41740121
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaaga-gaggttacata 104  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||| |  | ||| || ||||||||| |||||||||||||| ||| | | ||||| |||    
T  41740005 caaaggataatttggtaatattaacacacaaaatagacacattaattgtattaataatttttcttaaaaaatgtgaaaaaagtaaaaagggggttatata 41740104  T
Q  105 tagggatggagggagta 121  Q
    |||| | ||||||||||    
T  41740105 taggaacggagggagta 41740121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 43187125 - 43187209
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||||||||| |||||||||| ||| |||| ||||||||||| |||| | ||||||||| ||||||||| ||||||| ||||    
T  43187125 caaaggacaatttcgtaatattaatacacaaaacagacacattaattacattgacaactttttttaagaaatatgaaaaaggcaa 43187209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 48901549 - 48901625
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 82  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||| | ||||||| | ||||||||| |||||||||    
T  48901549 caaatgacaatttagtaatattaacacacaaaatagacaaattaattgcactaactatttttcttaataaatgtgaa 48901625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 48903115 - 48903191
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 82  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||| | ||||||| | ||||||||| |||||||||    
T  48903115 caaatgacaatttagtaatattaacacacaaaatagacaaattaattgcactaactatttttcttaataaatgtgaa 48903191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 26998969 - 26998890
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| |||||||||||| | |||||||| ||||||| || | | |||||||||||||||||||||||||||    
T  26998969 caaaagacaatttcgtaatattaacaaacaaaatagatacattaattataatgacaacttttcttaagaaatgtgaaaaa 26998890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 35055863 - 35055781
Alignment:
Q  3 aagcaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||||||   |  |||| |||||||||||||||||||||||||    
T  35055863 aagcaaatgacaatttggtaatattaacacacaaaatagacacattaa-agcgttaactacttttcttaagaaatgtgaaaaaa 35055781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 41543644 - 41543719
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    ||||||||  |||||||| |||| |||||||||||||||| |||||  ||||||||| ||||||||||||||||||    
T  41543644 gacaattttataatattatcacacaaaatagacacattaaatacacagacaactttttttaagaaatgtgaaaaaa 41543719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 50525008 - 50525123
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||||||||| |||||||||||||| |||||| ||| ||||| ||| |  | | ||||||||||||||||||||||||| |||| | | ||||||      
T  50525008 caaaggacaatttggtaatattaacacacaaaatatacatattaattaccccgagagcttttcttaagaaatgtgaaaaaagaaaagggtgcttacatta 50525107  T
Q  106 agggatggagggagta 121  Q
    |||||  |||||||||    
T  50525108 agggacagagggagta 50525123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 35765680 - 35765796
Alignment:
Q  8 aaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtg--aaaaaagcaaagagaggttacatat 105  Q
    |||| |||||| |||||||||| ||| |||| ||||| ||||| |||||| | ||||||||||||||||||||  |||||| ||||| |   ||||||||    
T  35765680 aaggtcaatttggtaatattaatacacaaaacagacatattaattacactgataacttttcttaagaaatgtggaaaaaaaacaaaggggaattacatat 35765779  T
Q  106 agggatggagggagtag 122  Q
    || || |||||||||||    
T  35765780 agtgacggagggagtag 35765796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 41308822 - 41308887
Alignment:
Q  20 gtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||| |||| ||||||||||| |||||| ||||| ||| |||||||||||||||||    
T  41308822 gtaatattaacacacaaaacagacacattaattacactgacaacattttttaagaaatgtgaaaaa 41308887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 48581377 - 48581304
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagag 94  Q
    ||||||||| ||| |||||| ||||||||||||||  || ||||||| ||||||||||||||||||||| ||||    
T  48581377 taatattaatacacaaaataaacacattaactacatcaataactttttttaagaaatgtgaaaaaagcatagag 48581304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 33412011 - 33412071
Alignment:
Q  12 acaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaa 72  Q
    ||||||| |||||||||||||| |||||||||||||||| | ||||||||| |||||||||    
T  33412011 acaatttggtaatattaacacacaaaatagacacattaattgcactaacaatttttcttaa 33412071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 48309518 - 48309443
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 82  Q
    ||||||| ||||| |||||||||||| | |||||||||||| ||| | ||||||||||||||||||||||| |||||    
T  48309518 caaaggataattttgtaatattaacatacaaaatagacaca-taattgcactaacaacttttcttaagaaacgtgaa 48309443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 54425988 - 54426068
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||| |||||||| |||||||||||||| |||| |||||||| ||||||| | | |  |||||||||||||||||||||||    
T  54425988 caaatgacaatttggtaatattaacacacaaaacagacacatcaactacattgatattttttcttaagaaatgtgaaaaaa 54426068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 39617282 - 39617345
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttct 69  Q
    ||||||||||||| |||||||||||| | |||| ||||||||||| |||||| |||||||||||    
T  39617282 caaaggacaatttcgtaatattaacatacaaaacagacacattaattacactgacaacttttct 39617345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 28477459 - 28477336
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttctt--------aagaaatgtgaaaaaagcaaagagagg 97  Q
    |||| |||||||| |||||||||||||| |||| ||||||||||| | |||  ||||||||||||        ||||||||||||||||| |||| | |     
T  28477459 caaaagacaatttggtaatattaacacacaaaacagacacattaattgcaccgacaacttttcttcttttcttaagaaatgtgaaaaaagaaaagggggc 28477360  T
Q  98 ttacatatagggatggagggagta 121  Q
    ||||||||||||| ||||| ||||    
T  28477359 ttacatatagggacggaggaagta 28477336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 831392 - 831477
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    ||||||||||||| |||||||||||||  || | |  |||||||| |||| | ||||||||||||||||||| ||||||| |||||    
T  831392 caaaggacaatttggtaatattaacacgcaatacatgcacattaattacattgacaacttttcttaagaaatatgaaaaatgcaaa 831477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 21864367 - 21864254
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag----caaagagaggttacatata 106  Q
    |||||||| ||||||||| |||||||||||||||||| || | ||||  ||| ||||||| |||||||||||||||     ||||||| | ||||||| |    
T  21864367 gacaatttggtaatattagcacataaaatagacacat-aattgcactgtcaatttttcttgagaaatgtgaaaaaaaaaaacaaagagcgtttacataca 21864269  T
Q  107 gggatggagggagta 121  Q
    | |||||||||||||    
T  21864268 gtgatggagggagta 21864254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 23157152 - 23157083
Alignment:
Q  23 atattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaag 92  Q
    |||||||| || |||| ||||||||||| |||||| |||| ||||||||||||||||||| ||| |||||    
T  23157152 atattaactcacaaaacagacacattaattacactgacaatttttcttaagaaatgtgaacaaaacaaag 23157083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 44083693 - 44083620
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttctt-aagaaatgtgaaaaaa 86  Q
    ||||| |||||||||||||| |||||||| ||||||| |||| |||||| ||||||| || |||||||||||||    
T  44083693 aatttggtaatattaacacacaaaatagatacattaattacaataacaatttttcttaaaaaaatgtgaaaaaa 44083620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 29611893 - 29611845
Alignment:
Q  21 taatattaacacataaaatagacacattaactacactaacaacttttct 69  Q
    ||||||||||||| |||||||||||||||| |||||||||||| |||||    
T  29611893 taatattaacacacaaaatagacacattaattacactaacaacatttct 29611845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 2421158 - 2421080
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||| |||||||| ||||||||||||||||| ||||| | ||||| |  | ||||||||||| |||||||||||||||||    
T  2421158 caaatgacaattttgtaatattaacacataagatagaaa-attaattgtattaacaactttttttaagaaatgtgaaaaa 2421080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 34055899 - 34055978
Alignment:
Q  11 gacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    ||||||||  ||||||||||||| |||| ||||| ||||| |||| | |||| |||| ||||||||||||||||| ||||    
T  34055899 gacaatttcataatattaacacacaaaacagacatattaattacattgacaattttttttaagaaatgtgaaaaaggcaa 34055978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 50092741 - 50092658
Alignment:
Q  7 aaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 90  Q
    |||||||||||| |||||||||| ||| ||||   ||||||||| ||||||  |||||||| ||||||||||| ||||| ||||    
T  50092741 aaaggacaattttgtaatattaatacacaaaaccaacacattaattacactgtcaacttttgttaagaaatgtaaaaaaggcaa 50092658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 54555964 - 54556035
Alignment:
Q  14 aatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||| |||| ||||||| |||||||||||| ||||| |||||||||| | ||| ||||||||| |||||||    
T  54555964 aatttggtaaaattaacatataaaatagacatattaattacactaacagcatttattaagaaatatgaaaaa 54556035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 35145280 - 35145235
Alignment:
Q  40 agacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||    
T  35145280 agacacgttaattacactcacaacttttcttaagaaatgtgaaaaa 35145235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 6902614 - 6902713
Alignment:
Q  22 aatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagagg-ttacatatagggatggagggagt 120  Q
    ||||| ||||||||||| | |||||||||   |||||||||| ||| ||||||||| ||||||| | ||| ||||| ||| ||||||||||||| |||||    
T  6902614 aatataaacacataaaagaaacacattaatagcactaacaacattttttaagaaatatgaaaaaggtaaa-agaggtttatatatagggatggatggagt 6902712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 21933000 - 21932956
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaa 50  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||    
T  21933000 caaaggataatttggtaatattaacacacaaaatagacacattaa 21932956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 28228217 - 28228138
Alignment:
Q  42 acacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagagg-ttacatatagggatggagggagta 121  Q
    ||||||||| | |||||||||||||| ||||||||| | |||||||||||| |||| ||| ||||||||| |||| |||||    
T  28228217 acacattaattgcactaacaactttttttaagaaatatcaaaaaagcaaag-gaggcttatatatagggacggagagagta 28228138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 33412097 - 33412137
Alignment:
Q  81 aaaaaagcaaagagaggttacatatagggatggagggagta 121  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  33412097 aaaaaaacaaagaggggttacatatagggatggagggagta 33412137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 11140779 - 11140700
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    ||||||| ||||| |||||| ||||||| |||| | ||||||||  |||||| | ||||||||||||  |||||||||||    
T  11140779 caaaggataatttggtaatactaacacacaaaacatacacattatttacactgataacttttcttaaacaatgtgaaaaa 11140700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 23068086 - 23068032
Alignment:
Q  27 taacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 82  Q
    ||||||| |||||||||||||||| |||| |||||| ||||||||| |||||||||    
T  23068086 taacacacaaaatagacacattaattacaataacaatttttcttaa-aaatgtgaa 23068032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 48213685 - 48213619
Alignment:
Q  20 gtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaa 86  Q
    |||||||||||||| |||||| ||||||||| |  | ||| |||||||||||| |||| ||||||||    
T  48213685 gtaatattaacacacaaaataaacacattaattttattaataacttttcttaaaaaatatgaaaaaa 48213619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 49000497 - 49000447
Alignment:
Q  35 aaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 85  Q
    |||||||||||||||| | ||  ||||||||||||||| ||||||||||||    
T  49000497 aaaatagacacattaattgcatcaacaacttttcttaaaaaatgtgaaaaa 49000447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 5504612 - 5504652
Alignment:
Q  44 acattaactacactaacaacttttcttaagaaatgtgaaaa 84  Q
    ||||||| |||||| ||||| ||||||||||||||||||||    
T  5504612 acattaattacactgacaacatttcttaagaaatgtgaaaa 5504652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 38521 - 38622
Alignment:
Q  20 gtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatatagggatggagggag 119  Q
    |||||||||||||| |||||||||||||||| || |||||||| |||| ||||||||||||||| |||||||||||| |||||||||| | |||||||||    
T  38521 gtaatattaacacacaaaatagacacattaattatactaacaatttttattaagaaatgtgaaagaagcaaagagagcttacatatagaggtggagggag 38620  T
Q  120 ta 121  Q
    ||    
T  38621 ta 38622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 214693 - 214612
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaag 87  Q
    |||| |||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  214693 caaatgacaatttggtaatattaacacaaaaactagacacattaattacactaacaacttttcttaagaaatgtgaaaaaag 214612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 49211 - 49096
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    |||| ||||||||| ||||||||||||| ||| |||||| ||||| |||| |||||| |||||||||||||||| ||||| ||||| || | ||| ||||    
T  49211 caaatgacaatttaataatattaacacacaaagtagacatattaattacattaacaatttttcttaagaaatgtaaaaaatgcaaaaagtgtttaaatat 49112  T
Q  106 agggatggagggagta 121  Q
    | ||| |||| |||||    
T  49111 aaggacggagagagta 49096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 99847 - 99932
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaa 91  Q
    |||| |||||||| |||||||||||||| ||||||||||||| |  | ||||||||||||||||||| |||| ||||||| |||||    
T  99847 caaaagacaatttcgtaatattaacacacaaaatagacacataagttgcactaacaacttttcttaacaaatatgaaaaatgcaaa 99932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 19605 - 19492
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagagaggttacatat 105  Q
    ||||||| ||||| ||||||||| ||||  ||||||||| ||||| | |||| |||||||||| ||||||||||||||||  ||||| | | ||||||      
T  19605 caaaggataatttggtaatattagcaca--aaatagacatattaattgcactgacaacttttcgtaagaaatgtgaaaaatacaaagtgggtttacatta 19508  T
Q  106 agggatggagggagta 121  Q
    ||||| ||||||||||    
T  19507 agggacggagggagta 19492  T

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Target: scaffold0699 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 7652 - 7577
Alignment:
Q  6 caaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 82  Q
    ||||||||||||| |||||| | ||| | ||||||||||| | || |||| ||||||||||||||||||||||||||    
T  7652 caaaggacaattttgtaatacttaca-acaaaatagacacctcaattacattaacaacttttcttaagaaatgtgaa 7577  T

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Target: scaffold0182 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18769 - 18695
Alignment:
Q  1 agaagcaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaa 75  Q
    |||| |||| |||||||| ||||||||||| || |||||| ||| ||||| | || ||||||||||| |||||||    
T  18769 agaaacaaatgacaatttggtaatattaacccacaaaataaacaaattaattgcattaacaactttttttaagaa 18695  T

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