View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14925_high_5 (Length: 279)
Name: NF14925_high_5
Description: NF14925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14925_high_5 |
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Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 18 - 269
Target Start/End: Original strand, 1150426 - 1150677
Alignment:
| Q |
18 |
cttagcacctttcatcgctttaaccttaacatcagtaggtacataaaccccatcttccaaaaaatccttaacattatagatagtaataagtgtctgaaaa |
117 |
Q |
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| T |
1150426 |
cttagcacctttcatcgctttaaccttaacatcagtaggtacataaaccccatcttccaaaaaatccttaacattatagatagtaataagtgtctgaaaa |
1150525 |
T |
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| Q |
118 |
gcactcggaaccaaaataattggaacaccttccccgattttaagatgcattttaggtttcggtgtttgatgatcatatcccatttcatcaccgccaaaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
1150526 |
gcactcggaaccaaaataattggaacaccttccccgattttaagatgcattttaggtttcggtgtttgatgatcatatcccatttcatcaccaccaaaat |
1150625 |
T |
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| Q |
218 |
catcagcacttcccaacaacctactcttagcaactaaaccgtctttcctttg |
269 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1150626 |
catcagcacttcccaacaacctactcttagcaactaaaccgtctttcctttg |
1150677 |
T |
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