View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14927_high_16 (Length: 341)
Name: NF14927_high_16
Description: NF14927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14927_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 12 - 295
Target Start/End: Complemental strand, 39265753 - 39265470
Alignment:
| Q |
12 |
gaatatatacaatgatagatttagcacaacaaatagttacagaacttaatgtcacttgttgttgcacaacaaagaaagttagccaaatgaaaagaggaac |
111 |
Q |
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| T |
39265753 |
gaatatatacaatgatagatttagcacaacaaatagttacagaacttaatgtcacttgttgttgcacaacaaagaaagttagccaaatgaaaagaggaac |
39265654 |
T |
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| Q |
112 |
aaatacaaatgcataatgaaattgagctcatgtgaagnnnnnnnggaagcaaatcgttgatttggtttcgtttgacactcttacttctctgagaaatgat |
211 |
Q |
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| T |
39265653 |
aaatacaaatgcataatgaaattgagctcatgtgaagaaaaaaaggaagcaaatcgttgatttggtttcgtttgacactcttccttctctgagaaatgat |
39265554 |
T |
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| Q |
212 |
attgcaatagaaaaatgagtagattgaaatgatgcaaataagtatgagaaatgatttgtgggaatgtcatgtcattttaaaata |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
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| T |
39265553 |
attgcaatagaaaaatgagtagattgaaatgatgcaaataagtatgagaaatgctttgtgggaatgtcttgtcattttaaaata |
39265470 |
T |
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