View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14927_high_29 (Length: 274)
Name: NF14927_high_29
Description: NF14927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14927_high_29 |
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Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 19 - 265
Target Start/End: Original strand, 40835116 - 40835362
Alignment:
| Q |
19 |
cctaggtttctccgtggcttatcattgaattccacgaattctttgctggataactccgatgattcaactacattgtgtatttgtgggatttgcagcagat |
118 |
Q |
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| T |
40835116 |
cctaggtttctccgtggcttatcattgaattccacgaattctttgctggataactccgaggattcaattacattgtgtatttgtgggatttgcagcagat |
40835215 |
T |
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| Q |
119 |
acataatgtaaagctagataaagacaaattctatatttgtttatgcatttgtttaaaaatttgaggggagaatacctcattcacattttctttctcttca |
218 |
Q |
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| T |
40835216 |
atataatgtaaagctaggtaaagacaaattctatatttgtttatgcatttgtttaaaaatttgaggggagaatacctcattcacattttctttctcttca |
40835315 |
T |
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| Q |
219 |
acagttctacaatgctacacaaatattgttgtaaactatagtataat |
265 |
Q |
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||||||||||||||||||||||||||||| ||||| ||||||||||| |
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| T |
40835316 |
acagttctacaatgctacacaaatattgtggtaaattatagtataat |
40835362 |
T |
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