View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14927_low_27 (Length: 311)
Name: NF14927_low_27
Description: NF14927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14927_low_27 |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 23802488 - 23802246
Alignment:
| Q |
19 |
gaatattagctatataacattgtaattatgagaagaaagatattgtcaaagtgattaatgaaagatcattaatttgtttaaatagtcataaatgtcattt |
118 |
Q |
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| T |
23802488 |
gaatattagctatataacattgtaattatgagaagaaagatattgtcaaagtgattaatgaaagatcattaatttgtttaaatagtcataaatgtcattt |
23802389 |
T |
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| Q |
119 |
aactactgctattgttcaaatttaataaacttcaggacttcaacacttgcatatgctagctgcaggccaatgaattggatcatttgcttccttaataaat |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23802388 |
aactactgctattgttcaaatttaataaacttcaggacttcaacacctgcatatgctagctgcaggccaatgaattggatcatttgcttccttaataaat |
23802289 |
T |
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| Q |
219 |
ttcattcaactattcaatctaaccacattcctaaactttcttg |
261 |
Q |
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| T |
23802288 |
ttcattcaactattcaatctaaccacattcctaaactttcttg |
23802246 |
T |
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