View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14928_low_12 (Length: 294)
Name: NF14928_low_12
Description: NF14928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14928_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 76 - 277
Target Start/End: Complemental strand, 46896113 - 46895912
Alignment:
| Q |
76 |
cccatacatttacctaataaaaacaaactactttgttaatgtactcagatttcatataacaaaataaaagcgtgtaagattaatagtagcaaaagtttat |
175 |
Q |
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| T |
46896113 |
cccatacatttacctaataaaaacaaactactttgttaatgtactcagatttcatataacaaaataaaagcttgtaagattaatagtagcaaaagtttat |
46896014 |
T |
|
| Q |
176 |
ttaccatcatagaattaaaaatataagttcaaaatattgctgttgttactactataaatgaacattaacactttcatatttgtttccatgaaagcttgca |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46896013 |
ttaccatcatagaattaaaaatataagttcaaaatattgctgttgttactactataaatgaacattaacactttcatatttgtttccatgaaagcttgca |
46895914 |
T |
|
| Q |
276 |
cg |
277 |
Q |
| |
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|| |
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| T |
46895913 |
cg |
46895912 |
T |
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