View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14928_low_17 (Length: 253)
Name: NF14928_low_17
Description: NF14928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14928_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 41258325 - 41258092
Alignment:
| Q |
1 |
tgaaatatatacagccactacttttaaagtacatcaaaccatttactttttgacatatataattaatcacagtaaaaaattgcactaggtattactagca |
100 |
Q |
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| T |
41258325 |
tgaaatatatacagccactacttttaaagtacatcaaaccatttactttttgacatatataattaatcacagtaaaaaactgcactaggtattactagca |
41258226 |
T |
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| Q |
101 |
taaaagaaaaatcattgttactatacttgattttattgtgatgggatatttttgttcctattgaagagtaaaatgaaaggaaaagactacacatgcataa |
200 |
Q |
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| T |
41258225 |
taaa-gaaaaatcattgttactatacttgattttattgtgatggaatatttttgttcctattgaagagtaaaatgaaaggaaaagactacacatgcataa |
41258127 |
T |
|
| Q |
201 |
taatattccaagaataaacgtaccttgatagtgaa |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
41258126 |
taatattccaagaataaacgtaccttgatagtgaa |
41258092 |
T |
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