View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14928_low_3 (Length: 606)

Name: NF14928_low_3
Description: NF14928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14928_low_3
NF14928_low_3
[»] chr4 (42 HSPs)
chr4 (268-424)||(29415448-29415604)
chr4 (22-85)||(29415833-29415896)
chr4 (238-327)||(19674413-19674501)
chr4 (238-332)||(16573372-16573465)
chr4 (238-328)||(33137199-33137289)
chr4 (267-323)||(17371845-17371901)
chr4 (265-328)||(3880494-3880557)
chr4 (237-328)||(17326704-17326795)
chr4 (272-326)||(19675625-19675679)
chr4 (265-327)||(45618284-45618346)
chr4 (265-329)||(17281568-17281632)
chr4 (265-329)||(17370070-17370134)
chr4 (272-328)||(34659704-34659760)
chr4 (256-327)||(3879085-3879156)
chr4 (265-331)||(29059708-29059774)
chr4 (265-327)||(30091053-30091115)
chr4 (238-327)||(33134890-33134980)
chr4 (265-327)||(41933817-41933879)
chr4 (257-323)||(41935061-41935126)
chr4 (256-326)||(44705299-44705369)
chr4 (265-327)||(54121698-54121760)
chr4 (265-326)||(22204055-22204116)
chr4 (265-326)||(42359344-42359405)
chr4 (447-587)||(1064994-1065132)
chr4 (294-333)||(29499175-29499214)
chr4 (245-324)||(47359516-47359595)
chr4 (294-332)||(13530681-13530719)
chr4 (272-326)||(32699319-32699373)
chr4 (253-327)||(45619717-45619791)
chr4 (292-329)||(5827939-5827976)
chr4 (274-323)||(29597747-29597796)
chr4 (294-331)||(43231083-43231120)
chr4 (265-338)||(51708966-51709039)
chr4 (294-327)||(51738379-51738412)
chr4 (292-328)||(13631565-13631601)
chr4 (294-330)||(14791774-14791810)
chr4 (294-330)||(30046760-30046796)
chr4 (294-330)||(30061101-30061137)
chr4 (275-323)||(35054665-35054713)
chr4 (239-323)||(38167745-38167829)
chr4 (267-329)||(40198574-40198633)
chr4 (294-330)||(43231357-43231393)
[»] chr3 (37 HSPs)
chr3 (238-332)||(40477345-40477439)
chr3 (238-325)||(48035703-48035790)
chr3 (237-328)||(52401015-52401106)
chr3 (239-327)||(52403096-52403184)
chr3 (238-327)||(42446525-42446614)
chr3 (238-327)||(54437438-54437527)
chr3 (238-326)||(52708588-52708676)
chr3 (265-325)||(20489356-20489416)
chr3 (265-335)||(977844-977914)
chr3 (265-324)||(20488368-20488427)
chr3 (265-327)||(39820602-39820664)
chr3 (265-327)||(47433807-47433869)
chr3 (238-327)||(976779-976868)
chr3 (246-327)||(38505558-38505639)
chr3 (238-327)||(51004141-51004230)
chr3 (267-327)||(46026075-46026135)
chr3 (265-337)||(53121292-53121363)
chr3 (267-326)||(4705681-4705740)
chr3 (238-325)||(45267306-45267393)
chr3 (238-328)||(32635592-32635682)
chr3 (238-328)||(42447758-42447848)
chr3 (265-325)||(40476222-40476282)
chr3 (245-329)||(43734019-43734103)
chr3 (246-326)||(46104343-46104423)
chr3 (265-328)||(46027415-46027478)
chr3 (267-326)||(48033058-48033117)
chr3 (272-323)||(52707539-52707590)
chr3 (246-328)||(44507778-44507860)
chr3 (294-327)||(863280-863313)
chr3 (265-326)||(9855178-9855239)
chr3 (294-335)||(14772202-14772243)
chr3 (272-329)||(19844527-19844584)
chr3 (294-331)||(25615970-25616007)
chr3 (265-326)||(43641143-43641204)
chr3 (294-330)||(19656537-19656573)
chr3 (294-330)||(47114483-47114519)
chr3 (284-332)||(50604082-50604130)
[»] chr7 (43 HSPs)
chr7 (237-331)||(41693640-41693734)
chr7 (238-329)||(36749218-36749309)
chr7 (237-331)||(42254953-42255047)
chr7 (237-327)||(40576765-40576855)
chr7 (265-328)||(35212066-35212129)
chr7 (265-324)||(28462626-28462685)
chr7 (276-327)||(39619800-39619851)
chr7 (265-327)||(32197907-32197969)
chr7 (238-320)||(43869883-43869965)
chr7 (265-337)||(24195596-24195668)
chr7 (265-325)||(31489933-31489993)
chr7 (265-328)||(13418948-13419011)
chr7 (265-331)||(5610151-5610217)
chr7 (265-327)||(24197101-24197163)
chr7 (265-327)||(31848142-31848204)
chr7 (238-312)||(42255873-42255947)
chr7 (238-327)||(30513252-30513340)
chr7 (246-326)||(36748198-36748277)
chr7 (265-327)||(5611505-5611567)
chr7 (265-327)||(17066424-17066486)
chr7 (274-323)||(32544781-32544830)
chr7 (265-337)||(31846975-31847047)
chr7 (265-325)||(31853549-31853609)
chr7 (265-328)||(11217069-11217132)
chr7 (265-328)||(12385705-12385768)
chr7 (294-332)||(9659657-9659695)
chr7 (265-327)||(12933418-12933480)
chr7 (541-587)||(21713499-21713545)
chr7 (265-327)||(25046238-25046300)
chr7 (294-332)||(25092154-25092192)
chr7 (294-328)||(30223763-30223797)
chr7 (294-331)||(3975544-3975581)
chr7 (272-325)||(32196685-32196738)
chr7 (238-327)||(41694926-41695015)
chr7 (273-329)||(554242-554298)
chr7 (294-330)||(1614872-1614908)
chr7 (294-330)||(5233804-5233840)
chr7 (265-321)||(25037755-25037811)
chr7 (294-330)||(25988717-25988753)
chr7 (294-330)||(31732419-31732455)
chr7 (294-330)||(36687231-36687267)
chr7 (273-329)||(38742178-38742234)
chr7 (294-330)||(39520394-39520430)
[»] chr5 (20 HSPs)
chr5 (238-327)||(15599764-15599853)
chr5 (238-327)||(4565392-4565481)
chr5 (265-331)||(3936573-3936639)
chr5 (265-327)||(3954051-3954113)
chr5 (265-326)||(6894008-6894069)
chr5 (267-327)||(31540495-31540555)
chr5 (265-324)||(3205100-3205159)
chr5 (238-324)||(25254102-25254188)
chr5 (238-324)||(25317892-25317978)
chr5 (265-341)||(15604056-15604131)
chr5 (265-329)||(27571127-27571191)
chr5 (265-329)||(34911826-34911890)
chr5 (257-326)||(31541612-31541681)
chr5 (238-330)||(6243401-6243493)
chr5 (265-327)||(3938058-3938120)
chr5 (238-324)||(14809165-14809251)
chr5 (272-328)||(18258160-18258216)
chr5 (272-328)||(24443378-24443434)
chr5 (294-326)||(35609303-35609335)
chr5 (294-330)||(37271674-37271710)
[»] chr8 (38 HSPs)
chr8 (238-329)||(22534693-22534784)
chr8 (265-327)||(38658480-38658542)
chr8 (237-326)||(3030396-3030485)
chr8 (237-326)||(28997963-28998052)
chr8 (251-327)||(10718432-10718508)
chr8 (265-328)||(14197823-14197886)
chr8 (265-328)||(22272268-22272331)
chr8 (265-327)||(10717120-10717182)
chr8 (265-334)||(4182615-4182683)
chr8 (265-329)||(36588219-36588283)
chr8 (238-329)||(22533314-22533405)
chr8 (245-324)||(38455449-38455528)
chr8 (265-327)||(38456728-38456790)
chr8 (272-325)||(39440427-39440480)
chr8 (238-326)||(4183950-4184038)
chr8 (270-330)||(27117920-27117980)
chr8 (265-329)||(30123149-30123213)
chr8 (272-332)||(45517965-45518025)
chr8 (238-325)||(28996835-28996922)
chr8 (238-328)||(6783576-6783665)
chr8 (265-327)||(22270942-22271004)
chr8 (534-595)||(18850787-18850848)
chr8 (265-329)||(45516394-45516458)
chr8 (265-328)||(39439922-39439985)
chr8 (272-327)||(41847185-41847240)
chr8 (265-327)||(1376934-1376996)
chr8 (265-327)||(1385553-1385615)
chr8 (265-327)||(24954949-24955011)
chr8 (265-327)||(30124221-30124283)
chr8 (265-326)||(3031541-3031602)
chr8 (294-331)||(8298943-8298980)
chr8 (294-331)||(11976368-11976405)
chr8 (294-331)||(20984141-20984178)
chr8 (265-330)||(38659871-38659936)
chr8 (272-324)||(3483635-3483687)
chr8 (294-330)||(9175008-9175044)
chr8 (294-330)||(32725903-32725939)
chr8 (294-330)||(44997927-44997963)
[»] scaffold0009 (1 HSPs)
scaffold0009 (238-327)||(202578-202667)
[»] chr1 (44 HSPs)
chr1 (238-327)||(34934718-34934807)
chr1 (238-326)||(24609919-24610007)
chr1 (265-336)||(35721091-35721162)
chr1 (238-328)||(26863858-26863948)
chr1 (237-327)||(46073884-46073973)
chr1 (238-323)||(9774040-9774125)
chr1 (265-329)||(9774886-9774950)
chr1 (252-328)||(37395631-37395707)
chr1 (238-328)||(24611088-24611178)
chr1 (265-327)||(39163022-39163084)
chr1 (265-326)||(20722472-20722533)
chr1 (238-330)||(20723659-20723751)
chr1 (265-333)||(27264214-27264282)
chr1 (265-328)||(35911886-35911949)
chr1 (252-326)||(37396825-37396899)
chr1 (274-328)||(50164401-50164455)
chr1 (238-326)||(23469940-23470028)
chr1 (267-327)||(30724015-30724075)
chr1 (265-328)||(13074572-13074635)
chr1 (265-328)||(17977557-17977620)
chr1 (265-328)||(27262906-27262969)
chr1 (265-332)||(47038860-47038927)
chr1 (265-331)||(11711252-11711317)
chr1 (238-327)||(48334105-48334192)
chr1 (265-330)||(11710549-11710614)
chr1 (265-326)||(17976761-17976822)
chr1 (265-326)||(46075048-46075109)
chr1 (238-326)||(13074121-13074209)
chr1 (265-321)||(27816718-27816774)
chr1 (272-328)||(48588966-48589022)
chr1 (272-328)||(48594053-48594109)
chr1 (272-328)||(48598664-48598720)
chr1 (265-328)||(27815439-27815502)
chr1 (265-327)||(35722283-35722345)
chr1 (277-327)||(45979506-45979556)
chr1 (294-332)||(47819564-47819602)
chr1 (294-331)||(5058730-5058767)
chr1 (272-329)||(33234543-33234600)
chr1 (376-421)||(45115425-45115470)
chr1 (291-328)||(48153007-48153044)
chr1 (272-328)||(7867303-7867359)
chr1 (238-326)||(26865155-26865243)
chr1 (294-330)||(33000637-33000673)
chr1 (294-330)||(49073687-49073723)
[»] scaffold0002 (4 HSPs)
scaffold0002 (238-327)||(345869-345957)
scaffold0002 (237-326)||(374335-374424)
scaffold0002 (265-327)||(344936-344998)
scaffold0002 (279-327)||(376381-376429)
[»] scaffold0001 (2 HSPs)
scaffold0001 (265-326)||(120983-121044)
scaffold0001 (238-326)||(119593-119681)
[»] scaffold0517 (2 HSPs)
scaffold0517 (252-328)||(11507-11583)
scaffold0517 (252-326)||(10315-10389)
[»] chr6 (22 HSPs)
chr6 (265-329)||(16995448-16995512)
chr6 (272-327)||(29291358-29291413)
chr6 (265-327)||(21953205-21953267)
chr6 (237-329)||(17516159-17516251)
chr6 (251-330)||(20391210-20391287)
chr6 (243-326)||(21165246-21165330)
chr6 (238-332)||(1171623-1171716)
chr6 (265-327)||(3276366-3276428)
chr6 (265-327)||(17517307-17517369)
chr6 (265-327)||(34998139-34998201)
chr6 (265-326)||(20897495-20897556)
chr6 (265-332)||(34995108-34995175)
chr6 (265-326)||(18810532-18810593)
chr6 (265-326)||(20393266-20393327)
chr6 (272-326)||(1974157-1974211)
chr6 (447-501)||(25342699-25342752)
chr6 (271-328)||(1214694-1214751)
chr6 (265-326)||(1972400-1972461)
chr6 (294-327)||(8169786-8169819)
chr6 (294-331)||(17765343-17765380)
chr6 (272-329)||(21385530-21385587)
chr6 (267-331)||(26421843-26421907)
[»] chr2 (28 HSPs)
chr2 (237-333)||(19603731-19603826)
chr2 (265-328)||(25979249-25979312)
chr2 (238-327)||(25977869-25977958)
chr2 (238-326)||(11088651-11088739)
chr2 (267-329)||(8809593-8809656)
chr2 (265-330)||(1777465-1777530)
chr2 (256-328)||(30843642-30843714)
chr2 (378-501)||(22139560-22139676)
chr2 (265-324)||(23863048-23863107)
chr2 (251-326)||(25283256-25283331)
chr2 (265-327)||(2412426-2412488)
chr2 (265-327)||(23861751-23861813)
chr2 (265-326)||(1778788-1778849)
chr2 (265-326)||(19604917-19604978)
chr2 (265-330)||(43824159-43824224)
chr2 (271-323)||(12067000-12067052)
chr2 (280-328)||(24754171-24754219)
chr2 (265-325)||(25282408-25282468)
chr2 (272-335)||(16673402-16673465)
chr2 (265-324)||(21573938-21573997)
chr2 (278-328)||(3924877-3924927)
chr2 (294-332)||(31644835-31644873)
chr2 (294-328)||(36815803-36815837)
chr2 (294-335)||(29859840-29859881)
chr2 (265-326)||(30844546-30844607)
chr2 (272-328)||(18113087-18113143)
chr2 (294-330)||(29182164-29182200)
chr2 (294-330)||(43672286-43672322)
[»] scaffold0516 (1 HSPs)
scaffold0516 (238-326)||(1106-1194)
[»] scaffold0106 (2 HSPs)
scaffold0106 (265-327)||(29728-29790)
scaffold0106 (265-336)||(30905-30976)
[»] scaffold0765 (1 HSPs)
scaffold0765 (238-323)||(1863-1948)
[»] scaffold0095 (1 HSPs)
scaffold0095 (272-325)||(42760-42813)
[»] scaffold0562 (1 HSPs)
scaffold0562 (256-327)||(9921-9992)
[»] scaffold0230 (1 HSPs)
scaffold0230 (265-326)||(429-490)
[»] scaffold0786 (1 HSPs)
scaffold0786 (447-501)||(3072-3125)
[»] scaffold0390 (1 HSPs)
scaffold0390 (447-501)||(1604-1657)
[»] scaffold0005 (1 HSPs)
scaffold0005 (294-330)||(47921-47957)


Alignment Details
Target: chr4 (Bit Score: 93; Significance: 5e-45; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 268 - 424
Target Start/End: Complemental strand, 29415604 - 29415448
Alignment:
Q  268 tactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaattaattaatatgtgtccttgcaatctttctttgtt 367  Q
    |||||||||||||||| |||| ||||||||||||   | |  ||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29415604 tactagggaccaaaactcaaactcgtcatatttgttggaattaaaaatatattttagcctttaaattaattaatatgtgtccttgcaatctttctttggt 29415505  T
Q  368 aatgtcaataaactaggcttttcacccgagttgccgcacaggtcatatacaatgtaa 424  Q
    ||||||||||||||||| ||||||||||| || |||||||  |||||||||||||||    
T  29415504 aatgtcaataaactaggattttcacccgaattaccgcacaaatcatatacaatgtaa 29415448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 29415896 - 29415833
Alignment:
Q  22 gttactcacctcaattttcaattgattgattgatttggaatttcaaatcacgatgctgcccaga 85  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29415896 gttactcacctcaattttcagttgattgattgatttggaatttcaaatcacgatgctgcccaga 29415833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 19674501 - 19674413
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||||||||| || || || |||||||||||| |||| |||  ||||||||| |||||||||||||||||||||||    
T  19674501 tttgcagggatgaatttcaaaaaaaaaatt-accagggaccaaaactcaaactcgctatatttgcaaggaccaaaagcatattttagcct 19674413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 332
Target Start/End: Complemental strand, 16573465 - 16573372
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaa 332  Q
    |||||| ||||| ||||||||||| ||  | || || |||||||||||||||||| |||||||| |  |||||||||||||||||||||||||||    
T  16573465 tttgcagggatggatttcaaaaaaaaaaat-accagagaccaaaacccaaattcgccatatttgtagagaccaaaagcatattttagcctttaaa 16573372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 328
Target Start/End: Original strand, 33137199 - 33137289
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| ||||| ||||||||||| | |||||| |||||| |||||||||| |||  ||||||||| ||| ||||| ||||||||||||||    
T  33137199 tttgcaaggatggatttcaaaaaaaatttttaccagggactaaaacccaaactcgctatatttgcagggatcaaaaacatattttagcctt 33137289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 17371845 - 17371901
Alignment:
Q  267 ttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatatttta 323  Q
    |||| |||||||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  17371845 ttaccagggaccaaaacccaaattcgttatatttgcagggatcaaaagcatatttta 17371901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 3880494 - 3880557
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||||||||||||||||||||| |||  ||||||||| | ||||||| ||||||||||||||    
T  3880494 ttttactagggaccaaaacccaaactcgctatatttgcaggaaccaaaaacatattttagcctt 3880557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 328
Target Start/End: Original strand, 17326704 - 17326795
Alignment:
Q  237 atttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    ||||||| ||||  ||||||||||| | ||||||||||||||||||||||||| |   ||||||| | ||||||||| ||||||| ||||||    
T  17326704 atttgcagggattgatttcaaaaaaaatttttactagggaccaaaacccaaatgccctatatttggagggaccaaaaccatatttaagcctt 17326795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 19675625 - 19675679
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    ||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||    
T  19675625 agggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttagcc 19675679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 45618346 - 45618284
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||||||||| |||  ||||||||| ||||||||||||||| |||||||    
T  45618346 ttttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatatattagcct 45618284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 17281632 - 17281568
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||| ||||||||||| |||||||||  ||||||||| |||| ||||||| ||||||||||||    
T  17281632 ttttaccagggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttagccttt 17281568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 17370134 - 17370070
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||| ||||||||||| |||||||||  ||||||||| |||| ||||||| ||||||||||||    
T  17370134 ttttaccagggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttagccttt 17370070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 34659760 - 34659704
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||||||||||  || ||| |||||||||| ||||||||||||||||||||||||    
T  34659760 agggaccaaaaccttaactcgccatatttgcagggaccaaaagcatattttagcctt 34659704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 256 - 327
Target Start/End: Complemental strand, 3879156 - 3879085
Alignment:
Q  256 aaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| || ||||| ||||||||||| ||||| |||  ||||||||| ||| |||||||||||||||||||    
T  3879156 aaaaaaaaaatttaccagggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttagcct 3879085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 29059774 - 29059708
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaa 331  Q
    |||||| |||||||  ||| ||||||||| ||||||||| |||| |||| |||||||||||||||||    
T  29059774 ttttaccagggaccggaactcaaattcgttatatttgcagggacgaaaaacatattttagcctttaa 29059708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 30091053 - 30091115
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| | ||| ||||||  ||| |||||||||||||||||||||||| |||||||||||||    
T  30091053 ttttaccatggatcaaaacttaaactcgtcatatttgcatggaccaaaaccatattttagcct 30091115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 33134980 - 33134890
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaatt-ttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| | |||||||| |||||| |||  |||| ||||||||| | ||||| |||||||||||||| ||| ||||| |||||||||||||    
T  33134980 tttgcaggaatgaatttaaaaaaaaaataattacgagggaccaatatccaaactcgtcatatttgcagggatcaaaaacatattttagcct 33134890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 41933879 - 41933817
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||||| ||||||||||||||| |||  |||||||||  |||||||| |||||||||||||    
T  41933879 ttttactaaggaccaaaacccaaactcgctatatttgcagagaccaaaatcatattttagcct 41933817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 41935061 - 41935126
Alignment:
Q  257 aaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatatttta 323  Q
    ||||| |||||||||| | ||||||||||||| |||| ||||||||| ||||||||| |||||||||    
T  41935061 aaaaaaaattttactaag-accaaaacccaaactcgttatatttgcagggaccaaaaacatatttta 41935126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 326
Target Start/End: Complemental strand, 44705369 - 44705299
Alignment:
Q  256 aaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| || ||||||||| ||||||||||||||||   |||||||||  |||||||| ||||||||||||    
T  44705369 aaaaaaaaaatttactaggaaccaaaacccaaattcactatatttgcagagaccaaaaacatattttagcc 44705299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 54121698 - 54121760
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||||||||| ||| | |||||||| ||| ||||| |||||||||||||    
T  54121698 ttttaccagggaccaaaacccaaactcgccgtatttgcagggagcaaaatcatattttagcct 54121760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 22204116 - 22204055
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| |||||| |||||||||| |||  ||||||||| ||||||||| ||||||||||||    
T  22204116 ttttaccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 22204055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 42359344 - 42359405
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||||||||| ||||| |||  ||||||||| ||||||||| ||||||||||||    
T  42359344 ttttaccagggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagcc 42359405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 587
Target Start/End: Original strand, 1064994 - 1065132
Alignment:
Q  447 caaaaatacatcttataaattcaaacttaatattcaaatgccgtaactttaaattcaacgataaggaaagtaataagttttctacaaattttggaaaatt 546  Q
    |||||||||||| ||||| ||| ||||||||||||||||| | |||||||||||| ||  |||| | ||| | |  | | |||||| ||||  |||||||    
T  1064994 caaaaatacatcgtataa-ttccaacttaatattcaaatgtcataactttaaatttaagaataatggaaggattccg-tgtctacacatttctgaaaatt 1065091  T
Q  547 tccttatacactacattcaatgtactatcaatgtaaacacc 587  Q
    || ||| ||||| ||||||| ||| |||||||| |||||||    
T  1065092 tctttaaacactgcattcaaagtattatcaatgcaaacacc 1065132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 333
Target Start/End: Complemental strand, 29499214 - 29499175
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaaat 333  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  29499214 catatttgcagggaccaaaaccatattttagcctttaaat 29499175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 324
Target Start/End: Complemental strand, 47359595 - 47359516
Alignment:
Q  245 ggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttag 324  Q
    ||||| ||||||||||| || ||||| |||||| ||||| ||||||||  ||||||||| | || |||| ||||||||||    
T  47359595 ggatggatttcaaaaaacaaatttaccagggactaaaactcaaattcgctatatttgcaagaacgaaaaacatattttag 47359516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 13530681 - 13530719
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaaa 332  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  13530681 catatttgcagggaccaaaaccatattttagcctttaaa 13530719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 32699319 - 32699373
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    ||||||||||||||||| |||  |||||| || ||||||||| ||||||||||||    
T  32699319 agggaccaaaacccaaactcgctatatttacagggaccaaaaacatattttagcc 32699373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 45619717 - 45619791
Alignment:
Q  253 ttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    ||||||||| | |||||| ||||| ||||||| ||| |||  ||||||||| |||| |||| |||||||||||||    
T  45619717 ttcaaaaaaaatttttaccagggaacaaaacctaaactcgctatatttgcagggactaaaaacatattttagcct 45619791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 329
Target Start/End: Original strand, 5827939 - 5827976
Alignment:
Q  292 gtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  5827939 gtcatatttgcagggaccaaaaccatattttagccttt 5827976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 29597796 - 29597747
Alignment:
Q  274 ggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatatttta 323  Q
    ||||||||| ||||||| |||||||||||| ||||||| | |||||||||    
T  29597796 ggaccaaaatccaaattggtcatatttgcagggaccaataacatatttta 29597747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 43231120 - 43231083
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaa 331  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  43231120 catatttgcagggaccaaaaccatattttagcctttaa 43231083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 338
Target Start/End: Original strand, 51708966 - 51709039
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaattaatt 338  Q
    |||||| || ||| |||||| ||||  | |||||||||| |||| |||| |||||||||||||| |||||||||    
T  51708966 ttttaccagagactaaaaccaaaatgaggcatatttgcagggactaaaaccatattttagccttcaaattaatt 51709039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 327
Target Start/End: Original strand, 51738379 - 51738412
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcct 327  Q
    |||||||||||||||||||| |||||||||||||    
T  51738379 catatttgcatggaccaaaaccatattttagcct 51738412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 292 - 328
Target Start/End: Original strand, 13631565 - 13631601
Alignment:
Q  292 gtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  13631565 gtcatatttgcagggaccaaaaccatattttagcctt 13631601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 14791774 - 14791810
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  14791774 catatttgcagggaccaaaaccatattttagccttta 14791810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 30046760 - 30046796
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  30046760 catatttgcagggaccaaaaccatattttagccttta 30046796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 30061101 - 30061137
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  30061101 catatttgcagggaccaaaaccatattttagccttta 30061137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 35054713 - 35054665
Alignment:
Q  275 gaccaaaacccaaattcgtcatatttgcatggaccaaaagcatatttta 323  Q
    ||||||||||||||||||  ||||||||| |||| |||| |||||||||    
T  35054713 gaccaaaacccaaattcgctatatttgcagggactaaaatcatatttta 35054665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 38167745 - 38167829
Alignment:
Q  239 ttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatatttta 323  Q
    ||||| ||||| |||| |||||| ||  ||||  ||||| ||||||||||||||| ||||||| | |||||||||  ||||||||    
T  38167745 ttgcagggatggatttaaaaaaaaaaaattacgtgggactaaaacccaaattcgttatatttgtagggaccaaaaatatatttta 38167829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 329
Target Start/End: Complemental strand, 40198633 - 40198574
Alignment:
Q  267 ttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||| ||||||||||||||||| |||  ||||||||| ||   ||||||||||||||||||||    
T  40198633 ttaccagggaccaaaacccaaactcgctatatttgcaggg---aaaagcatattttagccttt 40198574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 43231357 - 43231393
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  43231357 catatttgcagggaccaaaaccatattttagccttta 43231393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 4e-27; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 238 - 332
Target Start/End: Original strand, 40477345 - 40477439
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaa 332  Q
    |||||| ||||||||||||||||| ||  |||||||||||||||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||    
T  40477345 tttgcagggatgaatttcaaaaaaaaaaattactagggaccaaaacccaaactcgttatatttgcagggaccaaaatcatattttagcctttaaa 40477439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 238 - 325
Target Start/End: Original strand, 48035703 - 48035790
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagc 325  Q
    |||||| |||||||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| ||| ||||| |||||||||||    
T  48035703 tttgcagggatgaatttcaaaaaagaaatttaccagggaccaaaatccaaactcgtcatatttgcagggatcaaaaacatattttagc 48035790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 237 - 328
Target Start/End: Complemental strand, 52401106 - 52401015
Alignment:
Q  237 atttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    ||||||| ||||||| ||||||||| || ||||| ||||||||||||||||| ||| |||||||||| ||||||||| ||||||||||||||    
T  52401106 atttgcagggatgaaattcaaaaaaaaaatttaccagggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttagcctt 52401015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 239 - 327
Target Start/End: Original strand, 52403096 - 52403184
Alignment:
Q  239 ttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    ||||| ||||||| ||||||||| ||  |||| ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||    
T  52403096 ttgcagggatgaaattcaaaaaaaaaaattaccagggaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttagcct 52403184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 42446614 - 42446525
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||||||||    ||||||||  |||||||||||||| ||| |||||||||| |||||||||||||||||||||||    
T  42446614 tttgcagggatgaatttcaaaaatttcttttactatcgaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttagcct 42446525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 327
Target Start/End: Original strand, 54437438 - 54437527
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| |||||||||| |||||| ||  ||||||||||||||||| ||||||||  ||||||||| ||||||||| |||||||||||||    
T  54437438 tttgcaaggatgaatttaaaaaaataaaattactagggaccaaaactcaaattcgctatatttgcagggaccaaaaacatattttagcct 54437527  T

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Target: chr3; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 238 - 326
Target Start/End: Original strand, 52708588 - 52708676
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||||||||||||||   ||||||| || |||||||||||||| |||  ||||||||| ||||||||||||||||||||||    
T  52708588 tttgcagggatgaatttcaaaaatttattttaccagagaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcc 52708676  T

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Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 20489356 - 20489416
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagc 325  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||||||| |||||||||||    
T  20489356 ttttaccagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttagc 20489416  T

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Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 977844 - 977914
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaatta 335  Q
    |||||| | ||||||||||||||| |||||||||||||| ||||||||||||||||| |||| ||| ||||    
T  977844 ttttaccaaggaccaaaacccaaactcgtcatatttgcagggaccaaaagcatatttcagccattatatta 977914  T

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Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 20488427 - 20488368
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttag 324  Q
    |||||| ||||||||||||||||||||  |||||||||| ||||||||| ||||||||||    
T  20488427 ttttaccagggaccaaaacccaaattcaccatatttgcagggaccaaaaacatattttag 20488368  T

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Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 39820602 - 39820664
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||||||||| |||  ||||||||| ||||||||| |||||||||||||    
T  39820602 ttttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaaccatattttagcct 39820664  T

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Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 47433807 - 47433869
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| |||||||||||| ||||||||  ||||||||| ||||||||| |||||||||||||    
T  47433807 ttttaccagggaccaaaactcaaattcgctatatttgcagggaccaaaaccatattttagcct 47433869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 976868 - 976779
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||  ||||||||||| | |||||| |||||| |||||  |||||||  ||||||||| ||| |||||||||||||||||||    
T  976868 tttgcaaggattgatttcaaaaaatatttttaccagggactaaaacttaaattcgctatatttgcagggatcaaaagcatattttagcct 976779  T

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Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 246 - 327
Target Start/End: Original strand, 38505558 - 38505639
Alignment:
Q  246 gatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||| ||||||||||| ||  ||||  ||||||||||| |||| ||| |||||||||| ||| |||||||||||||||||||    
T  38505558 gatggatttcaaaaaaaaaaattacatgggaccaaaactcaaactcgccatatttgcagggagcaaaagcatattttagcct 38505639  T

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Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 51004230 - 51004141
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||||||||  || ||||   |||||||||||||||||||| ||||||| || || | |||| |||||||||||||    
T  51004230 tttgcagggatgaatttcaaaaataaaatttatccgggaccaaaacccaaattcgccatatttacagggtctaaaaacatattttagcct 51004141  T

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Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 46026135 - 46026075
Alignment:
Q  267 ttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||||||||||||| ||||| |||  ||||||||| ||||||||| |||||||||||||    
T  46026135 ttactagggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagcct 46026075  T

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Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 53121363 - 53121292
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaattaat 337  Q
    |||||| |||||| |||||||||| |||  ||||||||| ||||||||| |||||||||||| ||||||||||    
T  53121363 ttttaccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc-ttaaattaat 53121292  T

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Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 267 - 326
Target Start/End: Complemental strand, 4705740 - 4705681
Alignment:
Q  267 ttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||| ||||||||||||| ||| ||| |||||||||| ||| ||||||||||||||||||    
T  4705740 ttaccagggaccaaaacctaaactcgccatatttgcagggatcaaaagcatattttagcc 4705681  T

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Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 325
Target Start/End: Complemental strand, 45267393 - 45267306
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagc 325  Q
    |||||| ||||| ||||||||||| ||  |||| |||||||||||| |||| |||  ||||||||| ||| ||||| |||||||||||    
T  45267393 tttgcagggatggatttcaaaaaaaaaaattaccagggaccaaaactcaaactcgctatatttgcagggatcaaaaacatattttagc 45267306  T

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Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 32635682 - 32635592
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| ||||| |||| |||||| || ||||| ||||||||||||||||| |||  |||||| || |||| ||||  |||||||||||||    
T  32635682 tttgcaaggatggatttaaaaaaaaaaatttaccagggaccaaaacccaaactcgctatatttacaaggacaaaaaatatattttagcctt 32635592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 328
Target Start/End: Original strand, 42447758 - 42447848
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| |||||||||||||||    ||||||| ||||||||||||||||| |   | |||||||| | | ||||||||||||||||||||    
T  42447758 tttgcagggatgaatttcaaaattttattttaccagggaccaaaacccaaactaaccgtatttgcaggaatcaaaagcatattttagcctt 42447848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 40476282 - 40476222
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagc 325  Q
    ||||||||| |||||||| ||||| |||  ||||||||| ||||||||| |||||||||||    
T  40476282 ttttactagagaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagc 40476222  T

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Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 329
Target Start/End: Original strand, 43734019 - 43734103
Alignment:
Q  245 ggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    ||||| ||||||||||| ||  |||| || |||||||||||||| | |  ||||||||| | |||||| ||||||||||||||||    
T  43734019 ggatggatttcaaaaaaaaaaattaccagagaccaaaacccaaacttgctatatttgcaagaaccaaacgcatattttagccttt 43734103  T

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Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 326
Target Start/End: Complemental strand, 46104423 - 46104343
Alignment:
Q  246 gatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||| ||||||||||| ||  |||| |||||| ||||| |||| |||  ||||||||| ||||||||| ||||||||||||    
T  46104423 gatggatttcaaaaaaaaaaattaccagggacaaaaactcaaactcgctatatttgcagggaccaaaatcatattttagcc 46104343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 46027415 - 46027478
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| |||||||||||  |||| |||  ||||||||| |||||||||| |||||||||||||    
T  46027415 ttttaccagggaccaaaattcaaactcgctatatttgcagggaccaaaagtatattttagcctt 46027478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 326
Target Start/End: Complemental strand, 48033117 - 48033058
Alignment:
Q  267 ttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||| ||||||||||| ||||| ||  |||||||||| ||||||||| ||||||||||||    
T  48033117 ttaccagggaccaaaatccaaactcaccatatttgcaaggaccaaaaacatattttagcc 48033058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 52707590 - 52707539
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatatttta 323  Q
    |||||||||||| ||||||||  ||||||||| ||||||||| |||||||||    
T  52707590 agggaccaaaactcaaattcgctatatttgcaaggaccaaaaacatatttta 52707539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 328
Target Start/End: Original strand, 44507778 - 44507860
Alignment:
Q  246 gatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||| |||||||| || || ||||||| | |||||||  |||| |||  ||||||||| ||||||||| ||||||||||||||    
T  44507778 gatggatttcaaataaaaaatttactatgaaccaaaattcaaactcgctatatttgcagggaccaaaatcatattttagcctt 44507860  T

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Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 327
Target Start/End: Complemental strand, 863313 - 863280
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcct 327  Q
    |||||||||||||||||||| |||||||||||||    
T  863313 catatttgcatggaccaaaatcatattttagcct 863280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 9855239 - 9855178
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||||||||||||||| ||||| |||  |||||| || ||| ||||| ||||||||||||    
T  9855239 ttttactagggaccaaaatccaaactcgctatatttacagggatcaaaatcatattttagcc 9855178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 14772243 - 14772202
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaaatta 335  Q
    |||||||||| ||||||||| |||||||||||||| ||||||    
T  14772243 catatttgcagggaccaaaaccatattttagccttaaaatta 14772202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 19844527 - 19844584
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||| |||||| ||||  | |||||||||| ||||||||| |||||||||||||||    
T  19844527 agggactaaaaccaaaatgaggcatatttgcagggaccaaaaccatattttagccttt 19844584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 25616007 - 25615970
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaa 331  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  25616007 catatttgcagggaccaaaaccatattttagcctttaa 25615970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 43641204 - 43641143
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| |||||||| || ||||| |||  ||||||||| |||| |||||||||||||||||    
T  43641204 ttttaccagggaccataatccaaactcgctatatttgcagggactaaaagcatattttagcc 43641143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 19656573 - 19656537
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  19656573 catatttgcatggactaaaaccatattttagccttta 19656537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 47114519 - 47114483
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  47114519 catatttgcagggaccaaaatcatattttagccttta 47114483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 50604130 - 50604082
Alignment:
Q  284 ccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaa 332  Q
    |||||||||||||||||||  ||| ||||| ||||||||| ||||||||    
T  50604130 ccaaattcgtcatatttgcggggatcaaaatcatattttaacctttaaa 50604082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 41693734 - 41693640
Alignment:
Q  237 atttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaa 331  Q
    ||||||| ||||| | |||||||||||| ||||| ||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||    
T  41693734 atttgcagggatggaattcaaaaaagaaatttaccagggaccaaaacccaaattcgccatatttgcagggatcaaaaacatattttagcctttaa 41693640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 36749218 - 36749309
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||| ||||||||||||||| | || |||||||||||||||||| |||| ||||||||||||||  |||||||| |||||||||||||||    
T  36749218 tttgcagggatgaatttcaaaacaaaaatttactagggaccaaaactcaaactcgtcatatttgcaatgaccaaaaacatattttagccttt 36749309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 42255047 - 42254953
Alignment:
Q  237 atttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaa 331  Q
    |||||||  |||||||||||||||| || ||||| |||||||||||| |||| ||| ||||||| || |||||||||||||||||||||||||||    
T  42255047 atttgcagagatgaatttcaaaaaaaaaatttaccagggaccaaaactcaaactcgccatatttacagggaccaaaagcatattttagcctttaa 42254953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 237 - 327
Target Start/End: Complemental strand, 40576855 - 40576765
Alignment:
Q  237 atttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    ||||||||||||| |||||||||     |||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  40576855 atttgcatggatggatttcaaaattattttttaccagagaccaaaatccaaattcgtcatatttgcagggaccaaaagcatattttagcct 40576765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 35212129 - 35212066
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  35212129 ttttaccagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttagcctt 35212066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 28462626 - 28462685
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttag 324  Q
    |||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||    
T  28462626 ttttaccagggatcaaaacccaaattcgtcatatttgcagagaccaaaagcatattttag 28462685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 39619800 - 39619851
Alignment:
Q  276 accaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  39619800 accaaaacccaaactcgccatatttgcatggaccaaaagcatattttagcct 39619851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 32197907 - 32197969
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| | |||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  32197907 ttttaccaaggaccaaaacccaaattcgctatatttgcagggaccaaaagcatattttagcct 32197969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 320
Target Start/End: Original strand, 43869883 - 43869965
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatatt 320  Q
    |||||| ||||  ||||||||||| |||||||| ||||||||||||||||||| |  ||||||||| ||||||||| ||||||    
T  43869883 tttgcagggattgatttcaaaaaaaaattttaccagggaccaaaacccaaattggctatatttgcagggaccaaaaccatatt 43869965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 24195668 - 24195596
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaattaat 337  Q
    |||||| ||||| ||||||||||| |||  ||||||||| ||||||||| |||||||||||||||||| ||||    
T  24195668 ttttaccagggagcaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcctttaaaataat 24195596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 31489933 - 31489993
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagc 325  Q
    |||||||| ||||||||||||||| |||| ||||||||| ||||||||| |||||||||||    
T  31489933 ttttactaaggaccaaaacccaaactcgttatatttgcagggaccaaaaacatattttagc 31489993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 13419011 - 13418948
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| ||||||||| |||||||||||  ||||||||| ||||||||| ||||||||||||||    
T  13419011 ttttaccagggaccaatacccaaattcgcaatatttgcagggaccaaaaacatattttagcctt 13418948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 5610217 - 5610151
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaa 331  Q
    |||||| || ||| ||||||||||||||| ||||||||| ||| ||||||||||||||| |||||||    
T  5610217 ttttaccagagactaaaacccaaattcgttatatttgcagggatcaaaagcatattttaacctttaa 5610151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 24197101 - 24197163
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||| |||||||| ||||||||  ||||||||| |||||||||||||||||||||||    
T  24197101 ttttaccaggaaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcct 24197163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 31848142 - 31848204
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| |||||||||||||||||||||  ||||||||| |||| |||| |||||||||||||    
T  31848142 ttttaccagggaccaaaacccaaattcgctatatttgcagggactaaaaacatattttagcct 31848204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 42255873 - 42255947
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaa 312  Q
    |||||| |||||||||||||||    ||||||| |||||||||||| |||| |||||||||||||| ||||||||    
T  42255873 tttgcaaggatgaatttcaaaattttattttaccagggaccaaaactcaaactcgtcatatttgcagggaccaaa 42255947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 327
Target Start/End: Original strand, 30513252 - 30513340
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||| | ||||||||||| || ||||| ||| ||||||| ||||| || ||||||||||| ||||||||| |||||||||||||    
T  30513252 tttgcagggacggatttcaaaaaaaaaatttaccagg-accaaaatccaaactcatcatatttgcaaggaccaaaatcatattttagcct 30513340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 246 - 326
Target Start/End: Complemental strand, 36748277 - 36748198
Alignment:
Q  246 gatgaatttcaaaaaagaat-tttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||||||||||||| ||  |||||| |||||||||||||||| || ||||||||||| ||||||||| ||||||||||||    
T  36748277 gatgaatttcaaaaaaaaaaatttact-gggaccaaaacccaaactc-tcatatttgcagggaccaaaaacatattttagcc 36748198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 5611505 - 5611567
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| |||||| |||||||||| |||  ||||||||| ||||||||| |||||||||||||    
T  5611505 ttttacgagggacgaaaacccaaactcgctatatttgcagggaccaaaatcatattttagcct 5611567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 17066486 - 17066424
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||||||||| |||  ||||||||| |||  ||||||||||||||||||    
T  17066486 ttttaccagggaccaaaacccaaactcgctatatttgcagggattaaaagcatattttagcct 17066424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 32544781 - 32544830
Alignment:
Q  274 ggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatatttta 323  Q
    |||||||||||||||||||  ||||||||| ||||||||| |||||||||    
T  32544781 ggaccaaaacccaaattcgctatatttgcagggaccaaaatcatatttta 32544830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 31847047 - 31846975
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaattaat 337  Q
    |||||| ||| ||||||| ||||||| |  ||||||||| ||||||||||||||||||| |||  ||||||||    
T  31847047 ttttaccaggaaccaaaatccaaattagatatatttgcagggaccaaaagcatattttaacctaaaaattaat 31846975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 31853609 - 31853549
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagc 325  Q
    |||||||||||||||||| ||||| ||   ||||||||| ||||||||| |||||||||||    
T  31853609 ttttactagggaccaaaatccaaactcacaatatttgcagggaccaaaaacatattttagc 31853549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 11217069 - 11217132
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| |||||||||||  |||| |||  ||||||||| ||||||||||||||||||| ||||    
T  11217069 ttttaccagggaccaaaattcaaactcgctatatttgcagggaccaaaagcatattttaacctt 11217132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 12385705 - 12385768
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| ||||||||||| ||||| |||  ||||||||| ||||||||| ||||||||| ||||    
T  12385705 ttttaccagggaccaaaatccaaactcgctatatttgcagggaccaaaatcatattttatcctt 12385768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 9659657 - 9659695
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaaa 332  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  9659657 catatttgcagggaccaaaaccatattttagcctttaaa 9659695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 12933480 - 12933418
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| |||||||||||  |||| ||   ||||||||| |||||||||||||||||||||||    
T  12933480 ttttaccagggaccaaaattcaaactcactatatttgcagggaccaaaagcatattttagcct 12933418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 541 - 587
Target Start/End: Complemental strand, 21713545 - 21713499
Alignment:
Q  541 aaaatttccttatacactacattcaatgtactatcaatgtaaacacc 587  Q
    |||||||| ||||||||||||||||| ||||||| |||| |||||||    
T  21713545 aaaatttctttatacactacattcaaagtactataaatgcaaacacc 21713499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 25046238 - 25046300
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| | ||||||||| | ||| ||| |||||||||| ||||||||| |||||||||||||    
T  25046238 ttttaccatggaccaaaatctaaactcgccatatttgcaaggaccaaaatcatattttagcct 25046300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 332
Target Start/End: Complemental strand, 25092192 - 25092154
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaaa 332  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  25092192 catatttgcagggaccaaaaccatattttagcctttaaa 25092154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 328
Target Start/End: Original strand, 30223763 - 30223797
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||||||||||||||||| ||||||||||||||    
T  30223763 catatttgcatggaccaaaaccatattttagcctt 30223797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 3975581 - 3975544
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaa 331  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  3975581 catatttgcagggaccaaaaccatattttagcctttaa 3975544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 32196738 - 32196685
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagc 325  Q
    ||||||||||| |||||| ||  ||||||||| ||||||||| |||||||||||    
T  32196738 agggaccaaaatccaaatacgctatatttgcagggaccaaaaacatattttagc 32196685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 327
Target Start/End: Original strand, 41694926 - 41695015
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||| ||||||||||    |||||| |||||||||||| |||| |||  ||||||||| |||  |||| |||||||||||||    
T  41694926 tttgcagggatggatttcaaaaatattttttaccagggaccaaaactcaaactcgctatatttgcagggatgaaaaacatattttagcct 41695015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 554298 - 554242
Alignment:
Q  273 gggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||||||||||||| |||  ||||||||| ||||||| |  ||||||||||||||    
T  554298 gggaccaaaacccaaactcgctatatttgcagggaccaatattatattttagccttt 554242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 1614872 - 1614908
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  1614872 catatttgcagggaccaaaaccatattttagccttta 1614908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 5233840 - 5233804
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  5233840 catatttgcagggaccaaaaccatattttagccttta 5233804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 25037811 - 25037755
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattt 321  Q
    |||||| |||||||||||  |||| |||||||||||||| |||| |||| |||||||    
T  25037811 ttttaccagggaccaaaattcaaactcgtcatatttgcagggactaaaatcatattt 25037755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 25988717 - 25988753
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  25988717 catatttgcagggaccaaaaccatattttagccttta 25988753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 31732419 - 31732455
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  31732419 catatttgcatggactaaaaccatattttagccttta 31732455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 36687231 - 36687267
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  36687231 catatttgcagggaccaaaatcatattttagccttta 36687267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 38742234 - 38742178
Alignment:
Q  273 gggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||||||||||||| |||  ||||||||| |||| |||| ||||||||| |||||    
T  38742234 gggaccaaaacccaaactcgctatatttgcagggactaaaaacatattttaaccttt 38742178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 39520430 - 39520394
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  39520430 catatttggatggaccaaaaccatattttagccttta 39520394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 4e-24; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 15599853 - 15599764
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||||||||| ||  ||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  15599853 tttgcagggatgaatttcaaaaaaaaaaattactggggaccaaaacccaaattcgccatatttgtagggaccaaaagcatattttagcct 15599764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 4565481 - 4565392
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||||||||||||||||||||| ||  |||| ||||||||||||||||| |||  ||||||| | |||| |||| |||||||||||||    
T  4565481 tttgcatggatgaatttcaaaaaaaaaaattaccagggaccaaaacccaaactcgctatatttgtagggactaaaaacatattttagcct 4565392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 3936639 - 3936573
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaa 331  Q
    |||||| ||||||||||||||||| |||  ||||||||| ||||||||| |||||||||||||||||    
T  3936639 ttttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcctttaa 3936573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 3954113 - 3954051
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| |||||||||||||||||||||  ||||||||| ||||||||| |||||||||||||    
T  3954113 ttttaccagggaccaaaacccaaattcgatatatttgcaaggaccaaaaacatattttagcct 3954051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 6894008 - 6894069
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||||||||||| ||| |||||||||||||| ||||||||| ||||||||||||    
T  6894008 ttttaccagggaccaaaacctaaactcgtcatatttgcaaggaccaaaaacatattttagcc 6894069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 31540555 - 31540495
Alignment:
Q  267 ttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||| ||| |||||||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  31540555 ttaccaggtaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttagcct 31540495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 3205100 - 3205159
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttag 324  Q
    |||||| ||||||||||||||||| || ||||||||||| ||| ||||||||||||||||    
T  3205100 ttttaccagggaccaaaacccaaactcatcatatttgcagggatcaaaagcatattttag 3205159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 324
Target Start/End: Original strand, 25254102 - 25254188
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttag 324  Q
    |||||| ||||||||||||||||| ||  |||| ||||| |||||| |||| ||   ||||||||| ||||||||||||||||||||    
T  25254102 tttgcagggatgaatttcaaaaaaaaaaattaccagggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttag 25254188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 324
Target Start/End: Original strand, 25317892 - 25317978
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttag 324  Q
    |||||| ||||||||||||||||| ||  |||| ||||| |||||| |||| ||   ||||||||| ||||||||||||||||||||    
T  25317892 tttgcagggatgaatttcaaaaaaaaaaattaccagggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttag 25317978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 341
Target Start/End: Original strand, 15604056 - 15604131
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaattaattaat 341  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||||||| || ||||||| ||  ||||||| ||||    
T  15604056 ttttactagggaccaaaacccaaactcgccatatttgca-ggaccaaaaacacattttagtctaaaaattaagtaat 15604131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 27571127 - 27571191
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||| ||||| ||||||||||| |||  ||||||||| ||||||||| |||||||||||||||    
T  27571127 ttttaccagggatcaaaacccaaactcgctatatttgcagggaccaaaatcatattttagccttt 27571191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 34911826 - 34911890
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||||||||| ||||| ||||| |||  ||||||||| ||||||||| |||||||||||||||    
T  34911826 ttttactagggatcaaaatccaaactcgctatatttgcagggaccaaaatcatattttagccttt 34911890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 31541612 - 31541681
Alignment:
Q  257 aaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    ||||| ||| |||| |||||| |||||| |||||||| ||||||||| ||| ||||| ||||||||||||    
T  31541612 aaaaaaaatattaccagggacaaaaaccaaaattcgttatatttgcagggatcaaaaacatattttagcc 31541681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 330
Target Start/End: Complemental strand, 6243493 - 6243401
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||| ||||  |||||||||||  ||||||  ||||||||| || |||||  ||||||||||||  ||||||||||||| |||| ||||||    
T  6243493 tttgcaaggattgatttcaaaaaaacattttatcagggaccaacactcaaatgagtcatatttgcagagaccaaaagcatactttaaccttta 6243401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 3938058 - 3938120
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||||| ||| | |  ||||||||| |||| ||||||||||||||||||    
T  3938058 ttttaccagggaccaaaacctaaacttgctatatttgcagggactaaaagcatattttagcct 3938120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 324
Target Start/End: Complemental strand, 14809251 - 14809165
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttag 324  Q
    |||||| ||||| |||||||||   | || ||||||||||||||| |||||||||  ||||||| | ||| ||||| ||||||||||    
T  14809251 tttgcaaggatggatttcaaaatttatttctactagggaccaaaatccaaattcgctatatttgtagggatcaaaaacatattttag 14809165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 18258216 - 18258160
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| |||||| ||||  | |||||||||| ||||||||| ||||||||||||||    
T  18258216 agggactaaaaccaaaatgagccatatttgcagggaccaaaaccatattttagcctt 18258160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 24443434 - 24443378
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| |||||| ||||  | |||||||||| ||||||||| ||||||||||||||    
T  24443434 agggactaaaaccaaaatgaggcatatttgcagggaccaaaaccatattttagcctt 24443378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 326
Target Start/End: Complemental strand, 35609335 - 35609303
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcc 326  Q
    |||||||||||||||||||| ||||||||||||    
T  35609335 catatttgcatggaccaaaaccatattttagcc 35609303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 37271674 - 37271710
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  37271674 catatttgcagggaccaaaaccatattttagccttta 37271710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 2e-20; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 22534693 - 22534784
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||| || |||| ||||||||| |||||||| ||||||||||||||||| |||  ||||||||| ||| |||||||||||||||||||||    
T  22534693 tttgcagggttgaaattcaaaaaaaaattttaccagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttagccttt 22534784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 38658542 - 38658480
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| |||||||||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  38658542 ttttaccagggaccaaaacccaaattcgctatatttgcatggaccagaagcatattttagcct 38658480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 237 - 326
Target Start/End: Complemental strand, 3030485 - 3030396
Alignment:
Q  237 atttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    ||||||| ||| | ||||||||||| |||||||| ||| |||||||| |||||  |||||||||||| ||||||||||||||||| ||||    
T  3030485 atttgcagggacggatttcaaaaaataattttaccaggaaccaaaactcaaatgagtcatatttgcagggaccaaaagcatatttaagcc 3030396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 237 - 326
Target Start/End: Original strand, 28997963 - 28998052
Alignment:
Q  237 atttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    ||||||| |||||||||||||||     |||||||||||||||||||||||| |||  ||||||||| ||||||||| ||||||||||||    
T  28997963 atttgcagggatgaatttcaaaacttttttttactagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 28998052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 327
Target Start/End: Original strand, 10718432 - 10718508
Alignment:
Q  251 atttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    ||||||||||| ||  |||| ||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||    
T  10718432 atttcaaaaaaaaaaattaccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcct 10718508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 14197886 - 14197823
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||||||||||||||| ||||| ||| |||||||||| ||||||||| ||||||||||||||    
T  14197886 ttttactagggaccaaaatccaaactcgccatatttgcagggaccaaaaacatattttagcctt 14197823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 22272268 - 22272331
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| |||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||    
T  22272268 ttttaccagggaccaaaacccaaattcgctatatttgcggggaccaaaagcatattttagcctt 22272331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 10717182 - 10717120
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||    
T  10717182 ttttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcct 10717120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 4182683 - 4182615
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaatt 334  Q
    |||||| |||||||||||||||||||||  |||||| || |||||||||||||||||||| |||||||||    
T  4182683 ttttaccagggaccaaaacccaaattcgctatatttacagggaccaaaagcatattttag-ctttaaatt 4182615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 36588283 - 36588219
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||| |||||||||||| |||| |||  ||||||||| |||||||||||||||||||||||||    
T  36588283 ttttaccagggaccaaaacgcaaactcgctatatttgcagggaccaaaagcatattttagccttt 36588219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 22533405 - 22533314
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||| ||||||| ||||||||    |||||| ||||||||||||||||| |||  |||| | || |||||||||||||||||||||||||    
T  22533405 tttgcagggatgaaattcaaaaattttttttaccagggaccaaaacccaaactcgctatatatacagggaccaaaagcatattttagccttt 22533314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 324
Target Start/End: Complemental strand, 38455528 - 38455449
Alignment:
Q  245 ggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttag 324  Q
    ||||| ||||||||||| ||  ||||||||||||||||| |||||||   ||||||||| ||||||||| ||||||||||    
T  38455528 ggatggatttcaaaaaaaaaaattactagggaccaaaactcaaattcactatatttgcaaggaccaaaaacatattttag 38455449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 38456728 - 38456790
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||||| ||||| |  ||||||||| |||||||||||||||||||||||    
T  38456728 ttttaccagggaccaaaacctaaatttgctatatttgcagggaccaaaagcatattttagcct 38456790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 39440427 - 39440480
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagc 325  Q
    |||||||||||| |||| ||| |||||||||| |||||||||||||||||||||    
T  39440427 agggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttagc 39440480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 326
Target Start/End: Original strand, 4183950 - 4184038
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||  ||||||||||| ||| |||| |||||||||||||||||  |   ||||||||| |||| |||||||||||||||||    
T  4183950 tttgcagggatcgatttcaaaaaaaaatattaccagggaccaaaacccaaacgcactatatttgcagggactaaaagcatattttagcc 4184038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 27117920 - 27117980
Alignment:
Q  270 ctagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttta 330  Q
    ||||||||||||||| ||||  | |||||||||| ||||||||| ||||||||||||||||    
T  27117920 ctagggaccaaaaccaaaatgaggcatatttgcagggaccaaaaccatattttagccttta 27117980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 30123213 - 30123149
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||| |||||  ||||||||||||||  ||||||| ||||||||||| |||||||||||||||    
T  30123213 ttttacgagggagaaaaacccaaattcgctatatttgtatggaccaaaaacatattttagccttt 30123149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 45517965 - 45518025
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaa 332  Q
    ||||||||||||||||| |||  ||| ||||| ||||||||||||||||||||||| ||||    
T  45517965 agggaccaaaacccaaactcgctatacttgcagggaccaaaagcatattttagcctataaa 45518025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 325
Target Start/End: Complemental strand, 28996922 - 28996835
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagc 325  Q
    |||||| |||||||||||||||     |||||| ||||||||||||||||| ||   ||||||||| ||||||||| |||||||||||    
T  28996922 tttgcagggatgaatttcaaaacttttttttaccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagc 28996835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 6783665 - 6783576
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| ||||||||||||||||| || || || | |||||||||  |||||||  ||||||||||  |||||||| ||||||||||||||    
T  6783665 tttgcagggatgaatttcaaaaaaaaaatt-acgaaggaccaaaattcaaattcaccatatttgcagtgaccaaaaacatattttagcctt 6783576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 22271004 - 22270942
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| |||||| |||| |||||||||  ||||||||| ||| |||||||||||||||||||    
T  22271004 ttttaccagggactaaaatccaaattcgctatatttgcagggatcaaaagcatattttagcct 22270942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 534 - 595
Target Start/End: Original strand, 18850787 - 18850848
Alignment:
Q  534 attttggaaaatttccttatacactacattcaatgtactatcaatgtaaacaccgtcttcat 595  Q
    ||||||||||||||| ||| ||||||||||| | | |||||||||| ||||| |||||||||    
T  18850787 attttggaaaatttctttaaacactacattcgaagaactatcaatgcaaacatcgtcttcat 18850848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 45516458 - 45516394
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||| || ||||||||||||||||||  |||||| ||||||| |||| |||||||||| ||||    
T  45516458 ttttaccagagaccaaaacccaaattcgctatatttacatggactaaaaacatattttagtcttt 45516394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 39439985 - 39439922
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| |||| ||||||| |||| | | |||||||||| ||||||||| ||||||||||||||    
T  39439985 ttttaccagggtccaaaactcaaactagccatatttgcagggaccaaaatcatattttagcctt 39439922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 41847185 - 41847240
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||||||||| ||||||||  |||||||||  ||| ||||||||||||||||||    
T  41847185 agggaccaaaactcaaattcgctatatttgcagagactaaaagcatattttagcct 41847240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 1376996 - 1376934
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||| ||||||| |  ||||||||| ||||||||| ||||||| |||||    
T  1376996 ttttaccagggaccaaaatccaaattggctatatttgcagggaccaaaatcatatttaagcct 1376934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 1385553 - 1385615
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||| ||||||| |  ||||||||| ||||||||| ||||||| |||||    
T  1385553 ttttaccagggaccaaaatccaaattggctatatttgcagggaccaaaaccatatttaagcct 1385615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 24954949 - 24955011
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    ||||||||||||| |||||| |||   |||||||||||| |||| |||| |||||||||||||    
T  24954949 ttttactagggactaaaaccaaaacgagtcatatttgcagggactaaaaccatattttagcct 24955011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 30124221 - 30124283
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| |||||||||||| |||| | |   |||||||| |||||||||||||||||||||||    
T  30124221 ttttaccagggaccaaaactcaaacttgctttatttgcagggaccaaaagcatattttagcct 30124283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 3031541 - 3031602
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||||||||||| ||||  | ||||||| || ||||||||| ||||||||||||    
T  3031541 ttttaccagggaccaaaacctaaatgagccatatttacagggaccaaaaacatattttagcc 3031602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 8298943 - 8298980
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaa 331  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  8298943 catatttgcagggaccaaaaccatattttagcctttaa 8298980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 11976405 - 11976368
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaa 331  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  11976405 catatttgcagggaccaaaaccatattttagcctttaa 11976368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 20984178 - 20984141
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaa 331  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  20984178 catatttgcagggaccaaaaccatattttagcctttaa 20984141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 38659871 - 38659936
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||| || ||| |||| ||||| ||||||||||| || | ||||||||||||||||| ||||||    
T  38659871 ttttaccagtgactaaaatccaaactcgtcatatttacacgaaccaaaagcatattttaaccttta 38659936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 3483687 - 3483635
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttag 324  Q
    |||||||||||| |||| |||  ||||||||| ||||||||| ||||||||||    
T  3483687 agggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttag 3483635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 9175044 - 9175008
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  9175044 catatttgcaaggaccaaaatcatattttagccttta 9175008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 32725939 - 32725903
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  32725939 catatttgcagggaccaaaaccatattttagccttta 32725903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 44997963 - 44997927
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  44997963 catatttgcagggaccaaaatcatattttagccttta 44997927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 202667 - 202578
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| |||||||||| |||||| || |||||  |||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||    
T  202667 tttgcagggatgaattttaaaaaaaaaatttacccgggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttagcct 202578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 327
Target Start/End: Original strand, 34934718 - 34934807
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||||||| |  |||||||||| |||||||| | |||||||||||||||||||  ||||||||| |||| ||||||||||||||||||    
T  34934718 tttgcatggacgtttttcaaaaaaaaattttaccaaggaccaaaacccaaattcgctatatttgcagggacaaaaagcatattttagcct 34934807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 238 - 326
Target Start/End: Complemental strand, 24610007 - 24609919
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||||| |||||||||    ||||||||||||||||||||||| ||| |||||||||| ||||||||| ||||||||||||    
T  24610007 tttgcagggatgaaattcaaaaaatttatttactagggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttagcc 24609919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 35721162 - 35721091
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaattaa 336  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||| ||| ||||    
T  35721162 ttttaccagggaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttagcctataatttaa 35721091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 26863948 - 26863858
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| |||||| |||||||||| || ||||| |||||||||||| ||||||||  ||||||||| ||||||||| || |||||||||||    
T  26863948 tttgcagggatgattttcaaaaaaaaaatttaccagggaccaaaactcaaattcgctatatttgcagggaccaaaaacacattttagcctt 26863858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 327
Target Start/End: Complemental strand, 46073973 - 46073884
Alignment:
Q  237 atttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    ||||||| ||||||||||||||||| ||||| || |||||| |||||||||||| |  ||||||||| ||| |||||||||||||||||||    
T  46073973 atttgcagggatgaatttcaaaaaaaaattt-accagggactaaaacccaaatttgctatatttgcagggatcaaaagcatattttagcct 46073884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 9774125 - 9774040
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatatttta 323  Q
    |||||| ||||||||||||||||| ||  |||| |||||||||||| |||| |||| ||||||||| ||||||||| |||||||||    
T  9774125 tttgcagggatgaatttcaaaaaaaaaaattaccagggaccaaaactcaaactcgttatatttgcagggaccaaaaacatatttta 9774040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 9774886 - 9774950
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||| ||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  9774886 ttttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagccttt 9774950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 328
Target Start/End: Complemental strand, 37395707 - 37395631
Alignment:
Q  252 tttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||||||| || ||||| |||||||||||||||||| ||  ||||||||| ||||||||| ||||||||||||||    
T  37395707 tttcaaaaaaaaaatttaccagggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttagcctt 37395631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 328
Target Start/End: Original strand, 24611088 - 24611178
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| ||||||| |||||||    ||||||| |||||||||||| |||| ||||||||||| || ||||||||| ||||||||||||||    
T  24611088 tttgcagggatgaaattcaaaattttattttaccagggaccaaaactcaaactcgtcatatttacagggaccaaaaacatattttagcctt 24611178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 39163022 - 39163084
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||||||||  ||| |||||||||| |||||||||||||||||||||||    
T  39163022 ttttaccagggaccaaaacccaacctcgccatatttgcagggaccaaaagcatattttagcct 39163084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 20722533 - 20722472
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| |||||||||||||||||||||  ||||||||| |||||||||||| |||||||||    
T  20722533 ttttaccagggaccaaaacccaaattcgctatatttgcagggaccaaaagcacattttagcc 20722472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 330
Target Start/End: Original strand, 20723659 - 20723751
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||| ||||| |||||||||   | |||||| |||||| ||||| ||||||||  ||||||||| ||||||||| ||||||||||||||||    
T  20723659 tttgcagggatggatttcaaaatttatttttaccagggactaaaactcaaattcgctatatttgcagggaccaaaaacatattttagccttta 20723751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 27264214 - 27264282
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaat 333  Q
    |||||| ||||||||||||||||| |||  ||||||||| ||||||||| ||||||||||||| |||||    
T  27264214 ttttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaatcatattttagcctataaat 27264282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 35911886 - 35911949
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| | ||||||||| |||||||||  ||||||||| ||||||||||||||||||||||||    
T  35911886 ttttaccaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 35911949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 252 - 326
Target Start/End: Original strand, 37396825 - 37396899
Alignment:
Q  252 tttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    ||||||||||   |||||| | |||||||||| ||||||||  ||||||||| ||||||||||||||||||||||    
T  37396825 tttcaaaaaatttttttaccaaggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcc 37396899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 274 - 328
Target Start/End: Complemental strand, 50164455 - 50164401
Alignment:
Q  274 ggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||||||| |||| ||| |||||||||| ||||||||||||||||||||||||    
T  50164455 ggaccaaaactcaaactcgccatatttgcagggaccaaaagcatattttagcctt 50164401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 326
Target Start/End: Original strand, 23469940 - 23470028
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||| |||| |||||| || ||||| ||||| ||||||| ||| |||  ||||||||| ||||||||| ||||||||||||    
T  23469940 tttgcaaggatggatttaaaaaaaaaaatttaccagggatcaaaaccgaaactcgctatatttgcagggaccaaaaacatattttagcc 23470028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 30724015 - 30724075
Alignment:
Q  267 ttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||| |||||||||||| |||||| || ||||||||| |||| ||||||||||||||||||    
T  30724015 ttaccagggaccaaaactcaaatttgttatatttgcagggacgaaaagcatattttagcct 30724075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 13074572 - 13074635
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| |||||||||||| |||| |||||||||||||| | |||||||  |||||||||||||    
T  13074572 ttttaccagggaccaaaactcaaactcgtcatatttgcaggaaccaaaaatatattttagcctt 13074635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 17977557 - 17977620
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| | |||||||||||||||||||  ||||||||| ||||||||| ||||||| ||||||    
T  17977557 ttttaccaaggaccaaaacccaaattcgctatatttgcagggaccaaaaccatatttaagcctt 17977620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 27262969 - 27262906
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| |||||||||||| |||| |||  ||||||||| ||||||||| ||||||||||||||    
T  27262969 ttttaccagggaccaaaacacaaactcgctatatttgcagggaccaaaaacatattttagcctt 27262906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 47038927 - 47038860
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaa 332  Q
    |||||| ||||||||||||||||| | |  ||||||||| |||| |||| ||||||||||||||||||    
T  47038927 ttttaccagggaccaaaacccaaactagctatatttgcagggactaaaaacatattttagcctttaaa 47038860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 11711252 - 11711317
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaa 331  Q
    |||||| |||||||||| ||||||||||  ||||||||| ||||||||| |||||||||||| ||||    
T  11711252 ttttaccagggaccaaa-cccaaattcgctatatttgcagggaccaaaaacatattttagccattaa 11711317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 327
Target Start/End: Original strand, 48334105 - 48334192
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||||||||| ||||||||||| |  | ||  ||| |||||||| ||||||||  ||||||| | |||||||||||||||||||||||    
T  48334105 tttgcatggatggatttcaaaaaaaa--tatatcaggaaccaaaactcaaattcgctatatttgtagggaccaaaagcatattttagcct 48334192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 11710614 - 11710549
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||| ||||||||||||||||  |||| |||||| || ||| ||||| ||||||||||||||||    
T  11710614 ttttaccagggaccaaaacccaacctcgttatatttacagggatcaaaaacatattttagccttta 11710549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 17976822 - 17976761
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| |||||||||||||||||||||  ||||||||| | ||||||| ||||||| ||||    
T  17976822 ttttaccagggaccaaaacccaaattcgctatatttgcaggaaccaaaaccatatttaagcc 17976761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 46075048 - 46075109
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||||||||||||||| |||  ||||||||| ||| ||||| ||||||||||||    
T  46075048 ttttaccagggaccaaaacccaaactcgctatatttgcagggatcaaaaacatattttagcc 46075109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 326
Target Start/End: Complemental strand, 13074209 - 13074121
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||  ||||||||||| || ||||| | |||||||||| ||||||||  |||||||||  |||||| || |||||||||||    
T  13074209 tttgcagggattgatttcaaaaaaaaaatttacaaaggaccaaaactcaaattcgctatatttgcagagaccaagagaatattttagcc 13074121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 27816718 - 27816774
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattt 321  Q
    |||||| ||||||||||||||||||| |  ||||||||| ||||||||| |||||||    
T  27816718 ttttaccagggaccaaaacccaaattggctatatttgcagggaccaaaaccatattt 27816774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 48588966 - 48589022
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    ||||||||||||||||| ||  ||||||| || ||||||||| ||||||||||||||    
T  48588966 agggaccaaaacccaaactcaccatatttacagggaccaaaaacatattttagcctt 48589022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 48594053 - 48594109
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    ||||| ||||||||||| ||| ||||||| || ||||||||| ||||||||||||||    
T  48594053 agggatcaaaacccaaactcgccatatttacagggaccaaaaacatattttagcctt 48594109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 48598664 - 48598720
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    ||||| ||||||||||| ||| ||||||| || ||||||||| ||||||||||||||    
T  48598664 agggatcaaaacccaaactcgccatatttacagggaccaaaaacatattttagcctt 48598720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 27815502 - 27815439
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| ||||||||||||||||||| |  ||||||||| |||||| || ||||||| ||||||    
T  27815502 ttttaccagggaccaaaacccaaattggctatatttgcagggaccagaaccatatttaagcctt 27815439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 35722283 - 35722345
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| || |||||||| |||||||||  |||||| || ||||||||| |||||||||||||    
T  35722283 ttttaccagagaccaaaatccaaattcgctatatttacagggaccaaaaacatattttagcct 35722345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 45979506 - 45979556
Alignment:
Q  277 ccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    ||||||| ||||||||  ||||||||| ||||||||| |||||||||||||    
T  45979506 ccaaaactcaaattcgctatatttgcagggaccaaaaacatattttagcct 45979556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 47819564 - 47819602
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaaa 332  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  47819564 catatttgcagggaccaaaaccatattttagcctttaaa 47819602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 5058767 - 5058730
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaa 331  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  5058767 catatttgcatggaccaaaatcatattttagcttttaa 5058730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 33234600 - 33234543
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||| |||||| ||||  | |||||||||| ||||||||| |||||||||||||||    
T  33234600 agggactaaaaccaaaatgaggcatatttgcagggaccaaaaccatattttagccttt 33234543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 45115425 - 45115470
Alignment:
Q  376 taaactaggcttttcacccgagttgccgcacaggtcatatacaatg 421  Q
    |||||||| ||||||||||| | || ||||||||||||||||||||    
T  45115425 taaactagacttttcacccgtgatgtcgcacaggtcatatacaatg 45115470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 328
Target Start/End: Original strand, 48153007 - 48153044
Alignment:
Q  291 cgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  48153007 cgtcatatttgcagggagcaaaagcatattttagcctt 48153044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 7867303 - 7867359
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| |||||| ||||  | |||||||||| ||||||||| ||||||||||||||    
T  7867303 agggactaaaaccaaaataagacatatttgcagggaccaaaaccatattttagcctt 7867359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 326
Target Start/End: Original strand, 26865155 - 26865243
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||| |||||||||   | |||||| |||||| |||| |||||||||  |||||||||  ||||||||  |||||||||||    
T  26865155 tttgcagggatggatttcaaaatttatttttaccagggactaaaatccaaattcgctatatttgcagagaccaaaaatatattttagcc 26865243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 33000637 - 33000673
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  33000637 catatttgcagggaccaaaaccatattttagccttta 33000673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 49073723 - 49073687
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  49073723 catatttgcaaggaccaaaaccatattttagccttta 49073687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 6e-17; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 238 - 327
Target Start/End: Original strand, 345869 - 345957
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||  ||||||||||| || || ||||||||||||||||||||||||  ||||||||| ||||||||| |||||||||||||    
T  345869 tttgcagggattgatttcaaaaaaaaaatt-actagggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttagcct 345957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 326
Target Start/End: Complemental strand, 374424 - 374335
Alignment:
Q  237 atttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    ||||||| ||||| ||||||||||| ||  |||| ||||||||||||||||| |||  ||||||||| ||| ||||| ||||||||||||    
T  374424 atttgcagggatggatttcaaaaaaaaaaattacaagggaccaaaacccaaactcgctatatttgcagggatcaaaatcatattttagcc 374335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 344998 - 344936
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||||||||| ||| |||||||||| ||||||||| ||||||| |||||    
T  344998 ttttaccagggaccaaaacccaaactcgccatatttgcagggaccaaaatcatatttgagcct 344936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 376381 - 376429
Alignment:
Q  279 aaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||||||| |||  ||||||||| |||||||||||||||||||||||    
T  376381 aaaacccaaactcgctatatttgcagggaccaaaagcatattttagcct 376429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 120983 - 121044
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  120983 ttttaccagggaccaaaacccaaactcgttatatttgcagggaccaaaagcatattttagcc 121044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 326
Target Start/End: Complemental strand, 119681 - 119593
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||| | ||||||||| ||  |||| |||||||||||| ||||||||  ||||||||| ||||||||||||||||||||||    
T  119681 tttgcagggatggaattcaaaaaaaaaaattaccagggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcc 119593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 328
Target Start/End: Original strand, 11507 - 11583
Alignment:
Q  252 tttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||||||| || ||||| |||||||||||||||||| ||  ||||||||| ||||||||| ||||||||||||||    
T  11507 tttcaaaaaaaaaatttaccagggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttagcctt 11583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 252 - 326
Target Start/End: Complemental strand, 10389 - 10315
Alignment:
Q  252 tttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    ||||||||||   |||||| | |||||||||| ||||||||  ||||||||| ||||||||||||||||||||||    
T  10389 tttcaaaaaatttttttaccaaggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcc 10315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 16995512 - 16995448
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||| |||||||||||||||||||| | ||||||||| ||||||||| |||||||||||||||    
T  16995512 ttttaccagggaccaaaacccaaattctttatatttgcagggaccaaaaacatattttagccttt 16995448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 29291413 - 29291358
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||    
T  29291413 agggaccaaaacccaaactcgccatatttgcaaggaccaaaagcatattttagcct 29291358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 21953267 - 21953205
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  21953267 ttttaccagggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 21953205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 237 - 329
Target Start/End: Complemental strand, 17516251 - 17516159
Alignment:
Q  237 atttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||||  |||||| ||||||||| || ||||  ||||||||||||||||| ||  |||||||||| ||||||||| |||||||||| ||||    
T  17516251 atttgcagagatgaaattcaaaaaaaaaatttatcagggaccaaaacccaaactcaccatatttgcagggaccaaaaacatattttagtcttt 17516159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 251 - 330
Target Start/End: Complemental strand, 20391287 - 20391210
Alignment:
Q  251 atttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttta 330  Q
    ||||||||||| ||||  || ||||||||||||||||||||   ||||||||| ||||||||||||||||||| ||||||    
T  20391287 atttcaaaaaaaaatt--acgagggaccaaaacccaaattcactatatttgcagggaccaaaagcatattttaaccttta 20391210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 243 - 326
Target Start/End: Complemental strand, 21165330 - 21165246
Alignment:
Q  243 atggatgaatttcaaaaaagaatt-ttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    ||||||||||||||||||| ||   |||| |||||||||||| |||| |||  ||||||||| ||||||||||||||||||||||    
T  21165330 atggatgaatttcaaaaaaaaaaaattaccagggaccaaaacacaaactcgctatatttgcagggaccaaaagcatattttagcc 21165246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 332
Target Start/End: Original strand, 1171623 - 1171716
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaa 332  Q
    |||||| ||||| ||||||||||| |||||  | ||||||||||| ||||| |||| ||||||||| ||| ||||| ||||||||| ||||||||    
T  1171623 tttgcagggatggatttcaaaaaaaaatttatc-agggaccaaaaaccaaactcgttatatttgcagggatcaaaaacatattttaacctttaaa 1171716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 3276428 - 3276366
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    ||||||||||||| |||| |||||||||  ||||||||| ||||||||| |||||||||||||    
T  3276428 ttttactagggactaaaatccaaattcgctatatttgcagggaccaaaaacatattttagcct 3276366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 17517307 - 17517369
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| |||||||||||| |||| ||| |||||||||| ||||||||| |||||||||||||    
T  17517307 ttttaccagggaccaaaactcaaactcgccatatttgcagggaccaaaaacatattttagcct 17517369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 34998139 - 34998201
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||||||||| |||  ||||||||| ||| |||||||||||||||||||    
T  34998139 ttttaccagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttagcct 34998201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 20897495 - 20897556
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||||||||||||||||||   ||||||||| ||||||||| ||||||||||||    
T  20897495 ttttaccagggaccaaaacccaaattcactatatttgcagggaccaaaaccatattttagcc 20897556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 34995175 - 34995108
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaa 332  Q
    |||||| ||| |||||||| ||||||||  ||||||||| ||| ||||||||||||||||||| ||||    
T  34995175 ttttaccaggaaccaaaactcaaattcgctatatttgcagggatcaaaagcatattttagcctataaa 34995108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 18810593 - 18810532
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||||||||||||||| ||   ||||||||| ||||||||| ||||||||||||    
T  18810593 ttttaccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagcc 18810532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 20393266 - 20393327
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||||  |||||||||||||  ||||||||| ||| ||||||||||||||||||    
T  20393266 ttttaccagggactgaaacccaaattcgctatatttgcagggatcaaaagcatattttagcc 20393327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 1974157 - 1974211
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||||||||| ||||||||  ||||||||| ||| ||||| ||||||||||||    
T  1974157 agggaccaaaactcaaattcgctatatttgcaaggatcaaaaacatattttagcc 1974211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 501
Target Start/End: Original strand, 25342699 - 25342752
Alignment:
Q  447 caaaaatacatcttataaattcaaacttaatattcaaatgccgtaactttaaatt 501  Q
    |||||||||||| ||||| ||||| ||||||||||||||| | ||||||||||||    
T  25342699 caaaaatacatcgtataatttcaa-cttaatattcaaatgtcataactttaaatt 25342752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 328
Target Start/End: Complemental strand, 1214751 - 1214694
Alignment:
Q  271 tagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    ||||||| |||||| |||| || |||||||||| |||||||||  |||||||||||||    
T  1214751 tagggactaaaaccaaaatgcgacatatttgcagggaccaaaacaatattttagcctt 1214694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 1972461 - 1972400
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| || ||| ||||||||||||||   |||||||| ||||||||| ||||||||||||    
T  1972461 ttttaccagagactaaaacccaaattcgctttatttgcagggaccaaaaacatattttagcc 1972400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 327
Target Start/End: Complemental strand, 8169819 - 8169786
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcct 327  Q
    |||||||||||||||||||| |||||||||||||    
T  8169819 catatttgcatggaccaaaatcatattttagcct 8169786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 17765343 - 17765380
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaa 331  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  17765343 catatttgcagggaccaaaatcatattttagcctttaa 17765380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 21385530 - 21385587
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttt 329  Q
    |||||| |||||| ||||  | |||||||||| ||||||||| |||||||||||||||    
T  21385530 agggactaaaaccaaaatgaggcatatttgcagggaccaaaaccatattttagccttt 21385587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 331
Target Start/End: Original strand, 26421843 - 26421907
Alignment:
Q  267 ttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaa 331  Q
    |||| |||||| ||||| ||||||||  |||||||||  |||||||| ||| |||||||||||||    
T  26421843 ttaccagggactaaaactcaaattcgctatatttgcagagaccaaaaacatgttttagcctttaa 26421907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 333
Target Start/End: Complemental strand, 19603826 - 19603731
Alignment:
Q  237 atttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaat 333  Q
    ||||||| ||||| ||||||||||| |||||||| ||| ||||||||||||||  || ||||||||| ||||||||| ||||||| ||||| |||||    
T  19603826 atttgcagggatggatttcaaaaaataattttaccagg-accaaaacccaaatgagttatatttgcagggaccaaaaacatatttaagcctataaat 19603731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 25979249 - 25979312
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| |||||||||||||||||||||  ||||||||| ||||||||| ||||||||||||||    
T  25979249 ttttaccagggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttagcctt 25979312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 25977958 - 25977869
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||  ||||||||||| ||| |||| ||||||||||||||||| ||   ||||||||| ||||||||| |||||||||||||    
T  25977958 tttgcagggatcgatttcaaaaaaaaatattaccagggaccaaaacccaaactcactatatttgcagggaccaaaaacatattttagcct 25977869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 326
Target Start/End: Original strand, 11088651 - 11088739
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||||| || |||||| || ||||| ||| |||||||| ||||||||  |||||||||||||| |||| ||||||||||||    
T  11088651 tttgcagggatgaaattaaaaaaaaaaatttaccaggaaccaaaactcaaattcgctatatttgcatggacgaaaaacatattttagcc 11088739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 329
Target Start/End: Complemental strand, 8809656 - 8809593
Alignment:
Q  267 ttactagggaccaaaacccaaattcgtcatatttgc-atggaccaaaagcatattttagccttt 329  Q
    |||| |||||||||||||||||||||| |||||||| | ||||||||| |||||||||||||||    
T  8809656 ttaccagggaccaaaacccaaattcgttatatttgcaagggaccaaaaacatattttagccttt 8809593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 1777530 - 1777465
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||| |||||||||||| |||| |||  ||||||||| ||||||||| ||||||||||||||||    
T  1777530 ttttaccagggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttagccttta 1777465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 30843714 - 30843642
Alignment:
Q  256 aaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| || ||||| ||||||||||||||||| |||| |||||||||  ||  |||||||||||||||||||    
T  30843714 aaaaaaaaaatttaccagggaccaaaacccaaactcgttatatttgcagtgattaaaagcatattttagcctt 30843642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 501
Target Start/End: Original strand, 22139560 - 22139676
Alignment:
Q  378 aactaggcttttcacccgagttgccgcacaggtcatatacaatgtaataagtttaaatttatggagatgcaaaaatacatcttataaattcaaacttaat 477  Q
    |||||| ||||||||||| ||||| |||| |||||||||||||||||      || |||| |||| |  |||||||||||| ||| ||||| ||||||||    
T  22139560 aactagacttttcacccgtgttgcagcacgggtcatatacaatgtaa-----atatattt-tggaaaaacaaaaatacatcgtat-aattccaacttaat 22139652  T
Q  478 attcaaatgccgtaactttaaatt 501  Q
    ||||||||| | ||||||||||||    
T  22139653 attcaaatgtcataactttaaatt 22139676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 23863048 - 23863107
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttag 324  Q
    |||||||||||| ||||||||||| ||| ||||||||||  |||||||| ||||||||||    
T  23863048 ttttactagggatcaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 23863107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 251 - 326
Target Start/End: Original strand, 25283256 - 25283331
Alignment:
Q  251 atttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    ||||||||||| || ||||| ||||| |||||| ||||||||  |||||||||  |||||||| ||||||||||||    
T  25283256 atttcaaaaaaaaaatttaccagggatcaaaactcaaattcgctatatttgcagtgaccaaaaacatattttagcc 25283331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 2412426 - 2412488
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| |||||| |||||||||| |||  ||||||||| ||||||||| |||||||||||||    
T  2412426 ttttaccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcct 2412488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 23861813 - 23861751
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||| ||||| ||  |||||||||| ||||||||| |||||||||||||    
T  23861813 ttttaccagggaccaaaatccaaactctccatatttgcagggaccaaaaacatattttagcct 23861751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 1778788 - 1778849
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| | ||||||||||||||| |||  ||||||||| | ||||||||||||||||||||    
T  1778788 ttttaccaaggaccaaaacccaaagtcgctatatttgcaggaaccaaaagcatattttagcc 1778849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 19604917 - 19604978
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||||||||||||||||  | ||||||| || ||||||||| ||||||||||||    
T  19604917 ttttaccagggaccaaaacccaaatgagccatatttacagggaccaaaaacatattttagcc 19604978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 43824224 - 43824159
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagccttta 330  Q
    ||||||||||||||||||| |||||| |  ||||||||| |||| |||| ||||||||| ||||||    
T  43824224 ttttactagggaccaaaactcaaatttgctatatttgcagggacgaaaaacatattttaaccttta 43824159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 323
Target Start/End: Complemental strand, 12067052 - 12067000
Alignment:
Q  271 tagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatatttta 323  Q
    ||||||||||||| ||||||||| ||||||| | ||||||||| |||||||||    
T  12067052 tagggaccaaaactcaaattcgttatatttgtagggaccaaaaacatatttta 12067000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 24754171 - 24754219
Alignment:
Q  280 aaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||| ||||    
T  24754171 aaacccaaattcgccatatttgcagggaccaaaaacatattttaacctt 24754219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 25282468 - 25282408
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagc 325  Q
    |||||||||| |||||||| |||| ||| ||||||| || ||||||||| |||||||||||    
T  25282468 ttttactaggaaccaaaactcaaactcgacatatttacagggaccaaaaacatattttagc 25282408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 335
Target Start/End: Complemental strand, 16673465 - 16673402
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaatta 335  Q
    |||||| |||||| ||||  | |||||||||| ||||||||| ||||||||||||||| |||||    
T  16673465 agggactaaaaccaaaatgagacatatttgcagggaccaaaaccatattttagcctttcaatta 16673402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 21573997 - 21573938
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttag 324  Q
    |||||| | |||||||||  |||| | |||||||||||| ||||||||||||||||||||    
T  21573997 ttttaccaaggaccaaaaatcaaacttgtcatatttgcagggaccaaaagcatattttag 21573938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 278 - 328
Target Start/End: Original strand, 3924877 - 3924927
Alignment:
Q  278 caaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    ||||| ||||| ||| |||||||||| ||| ||||||||||||||||||||    
T  3924877 caaaatccaaactcgccatatttgcaaggagcaaaagcatattttagcctt 3924927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 332
Target Start/End: Complemental strand, 31644873 - 31644835
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaaa 332  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  31644873 catatttgcagggaccaaaaccatattttagcctttaaa 31644835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 328
Target Start/End: Original strand, 36815803 - 36815837
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||||||||||||||||| ||||||||||||||    
T  36815803 catatttgcatggaccaaaaccatattttagcctt 36815837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 29859840 - 29859881
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagcctttaaatta 335  Q
    |||||||||| ||||||||| |||||||||||||| ||||||    
T  29859840 catatttgcagggaccaaaaccatattttagccttaaaatta 29859881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 30844546 - 30844607
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| || |||| |||||| || |||| ||||||||| ||||||||| ||||||||||||    
T  30844546 ttttaccagagaccgaaacccgaactcgttatatttgcaaggaccaaaaacatattttagcc 30844607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 18113143 - 18113087
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctt 328  Q
    |||||| |||||| ||| | | |||||||||| ||||||||| ||||||||||||||    
T  18113143 agggactaaaaccaaaactaggcatatttgcagggaccaaaaccatattttagcctt 18113087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 29182200 - 29182164
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  29182200 catatttgcaaggaccaaaatcatattttagccttta 29182164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 43672286 - 43672322
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  43672286 catatttgcagggaccaaaatcatattttagccttta 43672322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 326
Target Start/End: Original strand, 1106 - 1194
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||| ||||||||||| || ||||| |||||||||||| |||| ||| ||||||||||  ||||||||  |||||||||||    
T  1106 tttgcaaggatggatttcaaaaaaaaaatttacgagggaccaaaactcaaactcgccatatttgcagagaccaaaaatatattttagcc 1194  T

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Target: scaffold0106 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 29790 - 29728
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| ||||||||||| ||||| ||||  |||||||| |||||||||||||||||||||||    
T  29790 ttttaccagggaccaaaatccaaactcgttttatttgcagggaccaaaagcatattttagcct 29728  T

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Target: scaffold0106; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 30905 - 30976
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcctttaaattaa 336  Q
    |||||| ||||||||||||||||| ||   ||||||||| ||||||||| ||||||||||||| | ||||||    
T  30905 ttttaccagggaccaaaacccaaactcactatatttgcagggaccaaaaccatattttagcctattaattaa 30976  T

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Target: scaffold0765 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 1948 - 1863
Alignment:
Q  238 tttgcatggatgaatttcaaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatatttta 323  Q
    ||||||||||||||||||||||     |||||||||||| |||||| |||| |||  ||||||||| ||||||||| |||||||||    
T  1948 tttgcatggatgaatttcaaaacttttttttactagggatcaaaactcaaactcgctatatttgcagggaccaaaatcatatttta 1863  T

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Target: scaffold0095 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 42760 - 42813
Alignment:
Q  272 agggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagc 325  Q
    |||||||||||| |||| ||| |||||||||| |||||||||||||||||||||    
T  42760 agggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttagc 42813  T

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Target: scaffold0562 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 256 - 327
Target Start/End: Complemental strand, 9992 - 9921
Alignment:
Q  256 aaaaaagaattttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcct 327  Q
    |||||| || ||||| ||||||||||| ||||| |||  ||||||||| ||| |||||||||||||||||||    
T  9992 aaaaaaaaaatttaccagggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttagcct 9921  T

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Target: scaffold0230 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 429 - 490
Alignment:
Q  265 ttttactagggaccaaaacccaaattcgtcatatttgcatggaccaaaagcatattttagcc 326  Q
    |||||| ||||||||||||||||| ||   ||||||||| ||||||||| ||||||||||||    
T  429 ttttaccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagcc 490  T

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Target: scaffold0786 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 501
Target Start/End: Complemental strand, 3125 - 3072
Alignment:
Q  447 caaaaatacatcttataaattcaaacttaatattcaaatgccgtaactttaaatt 501  Q
    |||||||||||| ||||| ||| ||||||||||||||||| | ||||||||||||    
T  3125 caaaaatacatcgtataa-ttccaacttaatattcaaatgtcataactttaaatt 3072  T

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Target: scaffold0390 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 501
Target Start/End: Complemental strand, 1657 - 1604
Alignment:
Q  447 caaaaatacatcttataaattcaaacttaatattcaaatgccgtaactttaaatt 501  Q
    |||||||||||| ||||| ||| ||||||||||||||||| | ||||||||||||    
T  1657 caaaaatacatcgtataa-ttccaacttaatattcaaatgtcataactttaaatt 1604  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 47957 - 47921
Alignment:
Q  294 catatttgcatggaccaaaagcatattttagccttta 330  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  47957 catatttgcagggaccaaaaccatattttagccttta 47921  T

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