View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14928_low_4 (Length: 551)
Name: NF14928_low_4
Description: NF14928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14928_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 482; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 1 - 537
Target Start/End: Complemental strand, 25126366 - 25125830
Alignment:
| Q |
1 |
tattgattccatactggtttggcatttaatttacattttgctattgatgatattattgattgcaattgcgatcacatattggttcgtatagtttttcatt |
100 |
Q |
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|||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
25126366 |
tattgattgcatactggtttggcatttaatttacatttttctattgatgatattattgattgcaattgcgatcgcatattggttcgtatagtttttcatt |
25126267 |
T |
|
| Q |
101 |
gcttactggtttttgtagtggtttgcatactagtttagaactgtgtttgaatactagtttttgaactgctttggaccaatccacatttgtattctgaatt |
200 |
Q |
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|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25126266 |
gcttactggtttc-gtagtggtttgcatactagtttggaactgtgtttgaatactagtttttgaactgctttggaccaatccacatttgtattctgaatt |
25126168 |
T |
|
| Q |
201 |
tttcggttaacgggataatattcaatgaaatcgatactt-cacgtggtttttagttgaacaacagtctcttttcaagtacttcaaaacattagtttttgt |
299 |
Q |
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|||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25126167 |
tttcggttaacgggataatattaaatgaaagcgatactttcacgtggtttttagttgaacaacagtctcttttcaagtacttcaaaacattagtttttgt |
25126068 |
T |
|
| Q |
300 |
tagaaaaatgtacaatgacggatggtattctagcatgttccctattagtgccaaattttgagttttacctatcaaagtagaagggaagttaaagtaatgc |
399 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25126067 |
tagaaaaatgtacaatgacggatggtattctagcatgttccctattagtgccacattttgagttttacctatcaaagtagaagggaagttaaagtaatgc |
25125968 |
T |
|
| Q |
400 |
atttcaatgatgtgtgaagctgttttctttggtgccagggtgaattggtgggggtgtagatttggcagtctgctgagaattatgcagaatttggtgtaca |
499 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
25125967 |
atttcaatgatgtgtgaagctgatttctttggtgccagggtgaattggtgggggtgtagatttggtagtctgctgagaattatgcagaatttggtgtaca |
25125868 |
T |
|
| Q |
500 |
gtgtacactcctgtttaatttgaaagttagagagaatt |
537 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
25125867 |
gtgtacactcctgtttaatttgaaagttagagagaatt |
25125830 |
T |
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