View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14929_high_6 (Length: 339)
Name: NF14929_high_6
Description: NF14929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14929_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 51 - 320
Target Start/End: Complemental strand, 36610702 - 36610433
Alignment:
| Q |
51 |
cactcccacattgcattcttgatcacatttgttcaattactagcaatatagatccacaacactaccaacttgttccacttgttcttcaacataattttta |
150 |
Q |
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| T |
36610702 |
cactcccacattgcattctttatcacatttgttcaattactagcaatatagatccacaacactaccaacttgttccacttgttcttcaacataattttta |
36610603 |
T |
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| Q |
151 |
ttctttgacaaatcttctttaattcttgcacctgtataaacacaacattttgcaacaacatccttaaccttgtctttccctgtttgaaaccaatttacat |
250 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
36610602 |
ttctttgacaaatcttctttaattcttgcacctgtataaacacaacattttgcaacaacatccttaaccttgtctttccctatttgaaaccaatttacat |
36610503 |
T |
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| Q |
251 |
gctctttttccaatactcacctcagaaagtgctttgtcttttctctatcattattgatcttgaaagccat |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36610502 |
gctctttttccaatactcacctcagaaagtgctttgtcttttctctatcattattgatcttgaaagccat |
36610433 |
T |
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