View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14929_low_9 (Length: 330)
Name: NF14929_low_9
Description: NF14929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14929_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 69 - 315
Target Start/End: Complemental strand, 50385684 - 50385438
Alignment:
| Q |
69 |
ttgaccagtaaagtagatttgaaagagtatttgatgaaaagaggaaaatgaaagatattttatagtagttacacaccaacataacatgaaggggatagaa |
168 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50385684 |
ttgaccagtaaagtagatttgaaagagtatttgatgaaaagaggaaaatgaaagatattttatagtagttacacaccaacataacatgaaggggatagaa |
50385585 |
T |
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| Q |
169 |
cctaatcctagataaagggtcaccattactcatcatgttggtgaaaatagagaaaccctttttagtagtcccattaatctcagtacagttcctttcaagc |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50385584 |
cctaatcctagataaagggtcaccattactcatcatgttggtgaaaatagagaaaccctttttagtagtcccattaatctcagtacagttcctttcaagc |
50385485 |
T |
|
| Q |
269 |
ttccccaccactttaacgtctctatcttcatcaaactctcttataac |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50385484 |
ttccccaccactttaacgtctctatcttcatcaaactctcttataac |
50385438 |
T |
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