View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1492_high_18 (Length: 447)
Name: NF1492_high_18
Description: NF1492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1492_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 421; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 10 - 430
Target Start/End: Original strand, 37515132 - 37515552
Alignment:
| Q |
10 |
attattctccttagtatagttaccatcacgctttccaatttcaattggataagctgacaggaaaaatatatacatataaacagaacatatatcattatag |
109 |
Q |
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| T |
37515132 |
attattctccttagtatagttaccatcacgctttccaatttcaattggataagctgacaggaaaaatatatacatataaacagaacatatatcattatag |
37515231 |
T |
|
| Q |
110 |
accttatttttcaatccaatccactcaaaaacgaatattagacacctaacacattgaaaatgaaaaccaccaacgaatgttcacactatacatcttaacc |
209 |
Q |
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| T |
37515232 |
accttatttttcaatccaatccactcaaaaacgaatattagacacctaacacattgaaaatgaaaaccaccaacgaatgttcacactatacatcttaacc |
37515331 |
T |
|
| Q |
210 |
tcttttcaaggaactagtttttccaacatttgatgtagttctaatcctcttcttagcttgtacaataaaatctgaaaaatggtcattatgattttccatc |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37515332 |
tcttttcaaggaactagtttttccaacatttgatgtagttctaatcctcttcttagcttgtacaataaaatctgaaaaatggtcattatgattttccatc |
37515431 |
T |
|
| Q |
310 |
ttgttaacataatttgcttcctctagaacatggttgttctgccccttaccgacgtttgacattgttctaattctgttcttttcacgttcaatgaattcac |
409 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37515432 |
ttgttaacataatttgcttcctctagaacatggttgttctgccccttaccgacgtttgacattgttctaattctgttcttttcacgttcaatgaattcac |
37515531 |
T |
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| Q |
410 |
taaaagcatcattaatatcca |
430 |
Q |
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||||||||||||||||||||| |
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| T |
37515532 |
taaaagcatcattaatatcca |
37515552 |
T |
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