View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1492_high_49 (Length: 263)
Name: NF1492_high_49
Description: NF1492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1492_high_49 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 28342151 - 28342391
Alignment:
| Q |
13 |
attattcttacttctgatatgtattcctttttcccttgtcttgacccttttgaaaccctcttcacagccacttctaatttgttgtttt-ttcaagtaaac |
111 |
Q |
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| T |
28342151 |
attattcttacttctgatatgtattcctttttcccttgtcttgacccttttgaaaccctcttcacagccacttctaatttgttgtttttttcaagtaaac |
28342250 |
T |
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| Q |
112 |
ctttgtaaacacctccaaatccaccttctccaagctttcctctttcatcgaaaccatttgttgaattgcttagttctttgtaagtgaacctttttggacc |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28342251 |
ctttgtaaacacctccaaatccaccttctccaagctttcctttttcatcgaaaccatttgttgaattgcttagttctttgtaagtgaacctttttggacc |
28342350 |
T |
|
| Q |
212 |
agttcctctctcgaattcatcttcatcgatagaagcttcaa |
252 |
Q |
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|||||||||||||||||||||||||||||||||||| |||| |
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| T |
28342351 |
agttcctctctcgaattcatcttcatcgatagaagcgtcaa |
28342391 |
T |
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