View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1492_high_55 (Length: 246)
Name: NF1492_high_55
Description: NF1492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1492_high_55 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 4880863 - 4880634
Alignment:
| Q |
1 |
taatttaactcttagtgtatattataaattattataaagattaattactgataactatgaatttttgttgattatttaatttcagcctggatcaacttca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4880863 |
taatttaactcttagtgtatattataaattattataaagattaattactgataactatgaatttttgttgattatttaatttcagcctggatcaacttca |
4880764 |
T |
|
| Q |
101 |
catgcttgctcacaaccatagaaagtacagtgacaagggcaacaaccgactggaaataactcagatgttcaattactattataattttcagtgattgaaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4880763 |
catgcttgctcacaaccatagaaagtacagtgacaagggcaacaaccgactggaaataattcagatgttcaattactattataattttcagtgattgaaa |
4880664 |
T |
|
| Q |
201 |
tatgaaagcactactcattagcatagtatt |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
4880663 |
tatgaaagcactactcattagcatagtatt |
4880634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University