View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1492_low_44 (Length: 292)

Name: NF1492_low_44
Description: NF1492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1492_low_44
NF1492_low_44
[»] chr4 (52 HSPs)
chr4 (16-282)||(50514444-50514709)
chr4 (17-133)||(34016639-34016756)
chr4 (16-133)||(35808374-35808492)
chr4 (21-133)||(55669757-55669870)
chr4 (18-133)||(26040338-26040454)
chr4 (15-106)||(45688755-45688847)
chr4 (16-133)||(23765591-23765709)
chr4 (17-121)||(51266938-51267043)
chr4 (18-133)||(41956191-41956307)
chr4 (16-106)||(33951713-33951804)
chr4 (16-121)||(32131155-32131261)
chr4 (16-90)||(19328950-19329024)
chr4 (16-133)||(26831764-26831882)
chr4 (24-133)||(27839284-27839394)
chr4 (16-133)||(31754951-31755069)
chr4 (16-133)||(2362642-2362762)
chr4 (16-120)||(10100104-10100209)
chr4 (21-101)||(20811281-20811362)
chr4 (46-133)||(51290473-51290561)
chr4 (16-133)||(31168147-31168265)
chr4 (15-91)||(53566971-53567050)
chr4 (16-131)||(30475438-30475554)
chr4 (16-121)||(34316712-34316819)
chr4 (38-107)||(19876187-19876257)
chr4 (16-80)||(47188697-47188761)
chr4 (21-87)||(3769831-3769897)
chr4 (18-91)||(35675211-35675284)
chr4 (16-136)||(54339126-54339246)
chr4 (28-91)||(35511201-35511264)
chr4 (36-121)||(31487754-31487840)
chr4 (18-71)||(32584560-32584613)
chr4 (23-80)||(45088087-45088144)
chr4 (18-91)||(51018400-51018473)
chr4 (18-74)||(52341616-52341672)
chr4 (18-77)||(35927309-35927368)
chr4 (18-77)||(52021047-52021106)
chr4 (18-92)||(13966574-13966648)
chr4 (18-107)||(30617964-30618054)
chr4 (16-109)||(40436094-40436188)
chr4 (18-63)||(1457584-1457629)
chr4 (18-91)||(30199807-30199880)
chr4 (18-75)||(39418155-39418212)
chr4 (19-75)||(46823488-46823544)
chr4 (18-77)||(966597-966656)
chr4 (28-75)||(49483122-49483169)
chr4 (33-75)||(11996140-11996182)
chr4 (18-91)||(27545877-27545950)
chr4 (18-91)||(13498138-13498211)
chr4 (27-91)||(23260728-23260793)
chr4 (18-63)||(25928454-25928499)
chr4 (18-75)||(36486723-36486780)
chr4 (22-75)||(53484634-53484687)
[»] chr7 (47 HSPs)
chr7 (16-133)||(40763262-40763380)
chr7 (16-106)||(24359713-24359804)
chr7 (15-133)||(29034699-29034818)
chr7 (16-121)||(43567496-43567602)
chr7 (16-133)||(1910257-1910374)
chr7 (16-135)||(5240308-5240428)
chr7 (16-106)||(8380454-8380545)
chr7 (16-105)||(3681707-3681797)
chr7 (16-133)||(7322931-7323049)
chr7 (17-133)||(8292759-8292876)
chr7 (15-133)||(46478537-46478652)
chr7 (16-133)||(27053471-27053589)
chr7 (16-109)||(42222234-42222328)
chr7 (16-107)||(22521599-22521691)
chr7 (23-133)||(30538458-30538569)
chr7 (27-121)||(48454812-48454907)
chr7 (23-133)||(5347950-5348061)
chr7 (23-133)||(36279139-36279250)
chr7 (17-107)||(41188790-41188881)
chr7 (16-74)||(29687489-29687547)
chr7 (16-133)||(22707062-22707179)
chr7 (16-107)||(40066921-40067012)
chr7 (18-91)||(32204197-32204270)
chr7 (16-107)||(49069568-49069660)
chr7 (16-91)||(46042761-46042835)
chr7 (16-70)||(31626083-31626137)
chr7 (16-120)||(8258634-8258734)
chr7 (16-61)||(40194839-40194884)
chr7 (27-107)||(43958087-43958168)
chr7 (18-90)||(40774264-40774336)
chr7 (28-75)||(4686080-4686127)
chr7 (17-75)||(30388697-30388755)
chr7 (41-91)||(31360313-31360363)
chr7 (20-76)||(6548547-6548603)
chr7 (26-70)||(35239829-35239873)
chr7 (28-91)||(3720135-3720198)
chr7 (18-69)||(5543061-5543112)
chr7 (28-71)||(35003630-35003673)
chr7 (18-61)||(43189688-43189731)
chr7 (27-90)||(44391019-44391082)
chr7 (18-68)||(44296945-44296995)
chr7 (18-75)||(16931906-16931962)
chr7 (18-75)||(16937289-16937345)
chr7 (18-63)||(18800197-18800242)
chr7 (33-70)||(46423388-46423425)
chr7 (18-75)||(48879685-48879742)
chr7 (18-70)||(5977757-5977809)
[»] chr1 (49 HSPs)
chr1 (16-133)||(34874580-34874698)
chr1 (16-133)||(27209696-27209814)
chr1 (16-121)||(11385797-11385903)
chr1 (16-121)||(11385994-11386100)
chr1 (16-133)||(41147453-41147571)
chr1 (16-133)||(47655346-47655464)
chr1 (16-107)||(4940741-4940833)
chr1 (16-130)||(40845264-40845379)
chr1 (16-133)||(2125682-2125800)
chr1 (16-121)||(32213876-32213982)
chr1 (16-133)||(43433788-43433906)
chr1 (16-121)||(49508721-49508826)
chr1 (15-135)||(4656028-4656149)
chr1 (15-133)||(7190450-7190569)
chr1 (16-106)||(42607326-42607417)
chr1 (16-106)||(49901939-49902030)
chr1 (15-124)||(932141-932251)
chr1 (16-133)||(22346212-22346330)
chr1 (17-106)||(28277484-28277574)
chr1 (16-106)||(33929979-33930070)
chr1 (17-107)||(50295434-50295525)
chr1 (28-133)||(28850885-28850991)
chr1 (16-91)||(6170569-6170644)
chr1 (16-91)||(50154486-50154561)
chr1 (16-133)||(24140786-24140903)
chr1 (18-90)||(41898878-41898950)
chr1 (24-107)||(45721773-45721857)
chr1 (16-107)||(52396456-52396547)
chr1 (15-133)||(31975499-31975618)
chr1 (16-133)||(26469557-26469675)
chr1 (16-107)||(29966835-29966928)
chr1 (18-107)||(41492924-41493013)
chr1 (18-70)||(17402963-17403015)
chr1 (15-80)||(47895346-47895411)
chr1 (18-109)||(40920200-40920294)
chr1 (33-91)||(5945450-5945508)
chr1 (39-121)||(8244128-8244207)
chr1 (18-91)||(16691309-16691382)
chr1 (28-91)||(8892789-8892852)
chr1 (28-70)||(27210750-27210792)
chr1 (28-66)||(44043500-44043538)
chr1 (18-91)||(14331852-14331925)
chr1 (16-60)||(30222633-30222678)
chr1 (18-91)||(43168156-43168229)
chr1 (18-91)||(44359690-44359763)
chr1 (18-63)||(46296231-46296276)
chr1 (18-91)||(48938651-48938723)
chr1 (18-91)||(51424172-51424245)
chr1 (18-74)||(23328437-23328493)
[»] chr3 (37 HSPs)
chr3 (17-123)||(8847440-8847547)
chr3 (16-133)||(8715480-8715597)
chr3 (16-133)||(9067367-9067484)
chr3 (16-133)||(36730131-36730249)
chr3 (16-133)||(25102300-25102417)
chr3 (16-133)||(32415582-32415700)
chr3 (16-124)||(10854872-10854985)
chr3 (17-121)||(35306346-35306451)
chr3 (17-133)||(44570364-44570481)
chr3 (16-140)||(46317499-46317624)
chr3 (16-107)||(4759854-4759946)
chr3 (16-133)||(29915553-29915671)
chr3 (16-133)||(29964706-29964824)
chr3 (17-133)||(44695649-44695766)
chr3 (16-142)||(37509124-37509251)
chr3 (15-107)||(51817316-51817409)
chr3 (16-91)||(52570795-52570870)
chr3 (34-133)||(1803919-1804019)
chr3 (16-102)||(12905292-12905378)
chr3 (16-87)||(20227405-20227476)
chr3 (18-100)||(21324531-21324612)
chr3 (18-107)||(18791-18881)
chr3 (17-91)||(12051052-12051126)
chr3 (18-91)||(18949-19022)
chr3 (18-75)||(34060803-34060860)
chr3 (27-71)||(26850535-26850579)
chr3 (16-75)||(41345988-41346047)
chr3 (18-76)||(34750293-34750351)
chr3 (44-133)||(48136701-48136790)
chr3 (18-91)||(39974827-39974900)
chr3 (18-63)||(50420699-50420744)
chr3 (18-74)||(11316981-11317037)
chr3 (17-61)||(31647318-31647362)
chr3 (18-107)||(45899547-45899638)
chr3 (21-68)||(49976185-49976232)
chr3 (32-74)||(6822837-6822879)
chr3 (18-75)||(12060096-12060153)
[»] chr2 (42 HSPs)
chr2 (16-133)||(765128-765246)
chr2 (17-130)||(39085773-39085887)
chr2 (16-109)||(2966553-2966647)
chr2 (16-133)||(39401513-39401630)
chr2 (17-124)||(17603825-17603933)
chr2 (16-133)||(6999215-6999333)
chr2 (16-120)||(16361579-16361684)
chr2 (16-133)||(27495136-27495254)
chr2 (16-121)||(33864368-33864474)
chr2 (16-120)||(862602-862707)
chr2 (17-133)||(1321182-1321299)
chr2 (17-120)||(33726394-33726498)
chr2 (16-133)||(44299659-44299777)
chr2 (18-122)||(9201484-9201589)
chr2 (18-109)||(2239597-2239689)
chr2 (17-135)||(13997880-13997999)
chr2 (15-133)||(17074466-17074584)
chr2 (16-106)||(41436491-41436582)
chr2 (16-91)||(44173132-44173207)
chr2 (16-133)||(17056036-17056153)
chr2 (16-133)||(17068483-17068600)
chr2 (16-70)||(17095108-17095162)
chr2 (16-107)||(35445294-35445387)
chr2 (17-91)||(464809-464884)
chr2 (17-75)||(23685689-23685747)
chr2 (16-61)||(15004940-15004985)
chr2 (18-118)||(34220639-34220740)
chr2 (18-75)||(747528-747585)
chr2 (16-108)||(17118376-17118468)
chr2 (18-67)||(3454743-3454791)
chr2 (18-91)||(10900271-10900344)
chr2 (18-91)||(34334182-34334255)
chr2 (16-120)||(43140314-43140419)
chr2 (39-90)||(11445313-11445364)
chr2 (18-73)||(29260167-29260222)
chr2 (28-71)||(34512671-34512714)
chr2 (27-61)||(8327004-8327038)
chr2 (21-91)||(30831636-30831706)
chr2 (18-91)||(2136451-2136524)
chr2 (18-75)||(11659277-11659334)
chr2 (36-89)||(37230253-37230306)
chr2 (16-52)||(11445379-11445415)
[»] chr5 (44 HSPs)
chr5 (16-130)||(35653236-35653351)
chr5 (15-133)||(35945258-35945377)
chr5 (15-106)||(34546790-34546882)
chr5 (17-133)||(37243861-37243977)
chr5 (18-135)||(4421940-4422058)
chr5 (15-121)||(4962507-4962613)
chr5 (16-133)||(43414042-43414160)
chr5 (23-107)||(27823279-27823364)
chr5 (16-119)||(25017283-25017387)
chr5 (15-134)||(28143100-28143220)
chr5 (15-107)||(5151501-5151594)
chr5 (16-133)||(16315512-16315628)
chr5 (24-141)||(8410163-8410281)
chr5 (16-107)||(1479140-1479232)
chr5 (16-107)||(1759830-1759922)
chr5 (19-91)||(12068195-12068267)
chr5 (16-134)||(39567916-39568035)
chr5 (16-90)||(13951258-13951332)
chr5 (42-130)||(15915871-15915960)
chr5 (16-114)||(3639072-3639170)
chr5 (23-121)||(40099352-40099450)
chr5 (16-121)||(338754-338860)
chr5 (16-89)||(12914188-12914261)
chr5 (17-80)||(39693024-39693087)
chr5 (16-99)||(25568304-25568388)
chr5 (18-70)||(39335488-39335540)
chr5 (18-91)||(38610313-38610386)
chr5 (16-134)||(10017599-10017715)
chr5 (21-91)||(19894836-19894906)
chr5 (18-75)||(678465-678522)
chr5 (18-90)||(20184570-20184642)
chr5 (28-71)||(12349585-12349628)
chr5 (18-69)||(24288502-24288553)
chr5 (18-69)||(24373668-24373719)
chr5 (28-75)||(28599691-28599738)
chr5 (18-56)||(3015106-3015144)
chr5 (18-91)||(6823773-6823847)
chr5 (18-91)||(3241974-3242047)
chr5 (23-75)||(27535114-27535167)
chr5 (30-70)||(5058772-5058812)
chr5 (18-90)||(17168691-17168763)
chr5 (19-75)||(28996229-28996285)
chr5 (19-51)||(39042096-39042128)
chr5 (35-91)||(39167628-39167683)
[»] chr8 (31 HSPs)
chr8 (17-133)||(19389288-19389405)
chr8 (15-102)||(18068974-18069062)
chr8 (23-133)||(4989953-4990064)
chr8 (16-101)||(26195383-26195469)
chr8 (18-133)||(21016035-21016151)
chr8 (16-107)||(25249345-25249437)
chr8 (17-106)||(10694821-10694911)
chr8 (15-107)||(8018773-8018866)
chr8 (16-106)||(26672803-26672894)
chr8 (18-130)||(21016249-21016362)
chr8 (19-135)||(45338020-45338137)
chr8 (16-91)||(6433557-6433632)
chr8 (16-91)||(6939171-6939246)
chr8 (23-133)||(5129434-5129545)
chr8 (16-106)||(37433279-37433369)
chr8 (15-91)||(26892798-26892874)
chr8 (32-107)||(44874354-44874430)
chr8 (15-101)||(14855394-14855481)
chr8 (30-107)||(7532812-7532890)
chr8 (16-61)||(33741525-33741570)
chr8 (16-80)||(34713953-34714017)
chr8 (18-70)||(4308824-4308876)
chr8 (18-77)||(30351606-30351666)
chr8 (27-105)||(3174484-3174563)
chr8 (27-90)||(20169309-20169372)
chr8 (28-75)||(39972189-39972236)
chr8 (18-68)||(20212433-20212483)
chr8 (21-66)||(17320000-17320045)
chr8 (18-91)||(38870019-38870092)
chr8 (28-61)||(39491858-39491891)
chr8 (18-70)||(6396315-6396367)
[»] chr6 (20 HSPs)
chr6 (17-107)||(6866929-6867020)
chr6 (17-107)||(12191507-12191598)
chr6 (16-132)||(10855445-10855562)
chr6 (26-133)||(29692319-29692427)
chr6 (16-91)||(7875202-7875277)
chr6 (17-134)||(7274191-7274309)
chr6 (15-91)||(7880448-7880524)
chr6 (16-120)||(5578287-5578392)
chr6 (16-91)||(8324125-8324200)
chr6 (16-133)||(26572060-26572173)
chr6 (18-70)||(31220369-31220421)
chr6 (18-70)||(21186059-21186111)
chr6 (28-91)||(12175584-12175647)
chr6 (46-133)||(32786259-32786346)
chr6 (16-134)||(16437567-16437678)
chr6 (22-74)||(1947424-1947476)
chr6 (18-107)||(28014650-28014740)
chr6 (18-75)||(5029489-5029546)
chr6 (18-91)||(27127528-27127601)
chr6 (18-67)||(34780023-34780072)
[»] scaffold0002 (1 HSPs)
scaffold0002 (11-80)||(392164-392233)
[»] scaffold0062 (3 HSPs)
scaffold0062 (16-133)||(16750-16867)
scaffold0062 (16-133)||(26918-27035)
scaffold0062 (16-133)||(37084-37201)
[»] scaffold0809 (2 HSPs)
scaffold0809 (45-132)||(4249-4337)
scaffold0809 (17-53)||(4705-4741)
[»] scaffold2122 (1 HSPs)
scaffold2122 (19-75)||(655-711)


Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 16 - 282
Target Start/End: Complemental strand, 50514709 - 50514444
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatgtcacaagg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| ||||||||||||||||||     
T  50514709 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttttcaatgttatatttctattttatcctcttatccaatgtcacaaga 50514610  T
Q  116 gcaatgattggcattctctatcttttaagtagaacaaatgaactagatgagtaaccaattacatttatcacatgaatacaattatatattaagagaaata 215  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50514609 gcaatggttagcattctctat-ttttaagtagaacaaatgaactagatgagtaaccaattacatttatcacatgaatacaattatatattaagagaaata 50514511  T
Q  216 acattcttacctgctataagacatagtttctgccactgtcactatcaacttgcactgcatattcttc 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50514510 acattcttacctgctataagacatagtttctgccactgtcactatcaacttgcactgcattttcttc 50514444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 34016639 - 34016756
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagg 115  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||| |||||    
T  34016639 tttcaacaacattttgacttttaaaaagttaaattcatcacttttcaccattttccaatgctatatttctatttttatccccttatccaatgtctcaagg 34016738  T
Q  116 gcaatgattggcattctc 133  Q
     ||||| || ||||||||    
T  34016739 acaatggttagcattctc 34016756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 35808492 - 35808374
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| || ||||||||||||||| |||||| |||||||||||||||||||| | ||||    
T  35808492 gtttcaacaacattttgacttttaaaaagttaaatttatcatttttcacaattttccaatgctatatttctatttttatccccttatccaatgccccaag 35808393  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  35808392 ggcaatggttagcattctc 35808374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 55669757 - 55669870
Alignment:
Q  21 aacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaa 119  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||| |||||| |||||||||||||||||||| | |||||||||    
T  55669757 aacaacattttgacttttaaaaagttaaatttatcatttttcaccattttccaatgctatatttctatttttatccccttatccaatgccccaagggcaa 55669856  T
Q  120 tgattggcattctc 133  Q
    || || ||||||||    
T  55669857 tggttagcattctc 55669870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 26040454 - 26040338
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaaggg 116  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||| |||| |||||| |||||||||||||||||||| | |||||     
T  26040454 ttcaacaatattttgacttttaaaaagttaaacttatcacttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaagga 26040355  T
Q  117 caatgattggcattctc 133  Q
    ||||| || ||||||||    
T  26040354 caatggttagcattctc 26040338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 45688755 - 45688847
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaat 106  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||||| |||||| |||||||||||||||||||    
T  45688755 agtttcaacaacattttgacttttaaaaagttaaatttatcacttttcatcatttttcaatgctatgtttctatttttatccccttatccaat 45688847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 23765591 - 23765709
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||||||||||||||| ||||   |||     
T  23765591 gtttcaacaacattttgatttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttcaatttttatccccttatctaatgcaccaaa 23765690  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  23765691 ggcaatggttagcattctc 23765709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 51266938 - 51267043
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagg 115  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| |||| |||||| ||||||| |||||||||||||  ||||     
T  51266938 tttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatctccttatccaatgttccaaga 51267037  T
Q  116 gcaatg 121  Q
    ||||||    
T  51267038 gcaatg 51267043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 41956307 - 41956191
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaaggg 116  Q
    |||||||||||||| |||||||||||||||||||||||| |||| | |||||||||||| ||| |||||| |||||||| ||||||| ||| | ||||||    
T  41956307 ttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcattttccaatgttatatttctatttttatcctcttatccgatgccccaaggg 41956208  T
Q  117 caatgattggcattctc 133  Q
    ||||| || ||||||||    
T  41956207 caatggttagcattctc 41956191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 33951713 - 33951804
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaat 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||| |||||| |||||||||||||| ||||    
T  33951713 gtttcaacaacattttaatttttaaaaagttaaatttatcacttttcacaattttccaatactatatttctatttttatccccttattcaat 33951804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 32131155 - 32131261
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    ||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||||| |||| |||||| ||||||| | |||||||||||  ||||    
T  32131155 gtttcaacaacatcttgacttttaaaaagttaaatttatcacttatcaccattttccaatactatatttctatttttatctctttatccaatgttccaag 32131254  T
Q  115 ggcaatg 121  Q
    |||||||    
T  32131255 ggcaatg 32131261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 19329024 - 19328950
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 90  Q
    |||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  19329024 gtttcaacaatattttgacttttaaaaagttaaatttatcacatttcaccattttccaatgctatatttctattt 19328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 26831882 - 26831764
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||  ||| |||||| |||||||| ||||| ||||| | ||||    
T  26831882 gtttcaacaacattttaatttttaaaaagataaatttatcactttttaccattttacaatattatatttctatttttatcctcttattcaatgccccaag 26831783  T
Q  115 ggcaatgattggcattctc 133  Q
    | ||||  || ||||||||    
T  26831782 gacaattgttagcattctc 26831764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 27839394 - 27839284
Alignment:
Q  24 aacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatga 122  Q
    |||||||| ||||||||||| |||||||||||| |||| | |||||| ||||||||| |||||| |||||| ||||||||||||| | |||||||||||     
T  27839394 aacattttgacttttaaaaacttaaatttatcatttttcatcatttttcaatgctatatttctatttttattcccttatccaatgccccaagggcaatgg 27839295  T
Q  123 ttggcattctc 133  Q
    || ||||||||    
T  27839294 ttagcattctc 27839284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 31754951 - 31755069
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| | |||||| |||| |||| ||| || |||||||||||||||||||  | |||     
T  31754951 gtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcatttttcaattctatatttatatttttatccccttatccaataccccaat 31755050  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  31755051 ggcaatggttagcattctc 31755069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 2362642 - 2362762
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaag--ttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcaca 112  Q
    |||| ||||||||||| |||||||||||   ||||||||||||||||| ||||||||||||| |||| ||| || |||||||||||||||| ||| | ||    
T  2362642 gttttaacaacattttgacttttaaaaaaaattaaatttatcacttttcaccattttccaatactatatttttatttttatccccttatccgatgcccca 2362741  T
Q  113 agggcaatgattggcattctc 133  Q
    ||||||||| || ||||||||    
T  2362742 agggcaatggttagcattctc 2362762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 10100209 - 10100104
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| ||||||||| |||  ||| ||| || |||||||||||||||| ||||| ||||    
T  10100209 gtttcaacaacattttgacttttaaaaagttaaatttataacttttcaccattttctaatattatatttatatttttatccccttatccgatgtcccaag 10100110  T
Q  115 ggcaat 120  Q
    | ||||    
T  10100109 gacaat 10100104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 20811281 - 20811362
Alignment:
Q  21 aacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttat 101  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||| ||| |||||| ||||||||||||||    
T  20811281 aacaacattttgacttttaaaaagttaaatttatcacttttcaccaatttccaatgttatatttctatttttatccccttat 20811362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 133
Target Start/End: Original strand, 51290473 - 51290561
Alignment:
Q  46 taaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 133  Q
    |||||||||||||||| | |||||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||| || ||||||||    
T  51290473 taaatttatcacttttcatcattttccaatgctatatttctaattttatccccttatccaatgtcccaaggacaatggttagcattctc 51290561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 31168147 - 31168265
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||   ||||| |||||||||||| || ||||   ||||    
T  31168147 gtttcaacaacattttgactttaaaaaaattaaatttatcacttttcaccattttccaatgctaaaattctatttttatccccttgtctaatgctccaag 31168246  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||  || ||||||||    
T  31168247 ggcaatagttagcattctc 31168265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 53567050 - 53566971
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttat---cactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||||||||||||||||||||||||||||||||||    ||||||||| ||||| ||||||||| ||||||||||    
T  53567050 agtttcaacaacattttaacttttaaaaagttaaatttattagtactttttactatttttcaatgctatatttctatttt 53566971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 30475438 - 30475554
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| || |||||||||||||||||||||||||| |||||||| |||| |||| ||| || ||||||| |||||||||||  |  |||    
T  30475438 gtttcaacaatattttgacatttaaaaagttaaatttatcacttttcaccatttttcaatactatatttttatttttatctccttatccaataccctaag 30475537  T
Q  115 ggcaatgattggcattc 131  Q
    ||||||| || ||||||    
T  30475538 ggcaatggttagcattc 30475554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 34316819 - 34316712
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaa-tttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaa 113  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||| || ||||| ||||| ||| ||| || ||||||| |||||||||||| | |||    
T  34316819 gtttcaacaatattttgacttttaaaaagttaaattttatcacttttcactatttttcaatgttatatttatatttttatctccttatccaatgccccaa 34316720  T
Q  114 gggcaatg 121  Q
    ||||||||    
T  34316719 gggcaatg 34316712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 19876257 - 19876187
Alignment:
Q  38 taaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||||||||||||||||||||||| || |||||||||| |||| |||||| ||||||||||||||||||||    
T  19876257 taaaaagttaaatttatcacttttcactattttccaatactatatttctatttttatccccttatccaatg 19876187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 47188761 - 47188697
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 80  Q
    |||||||||||||||| |||||| | |||||||||||||||||||| ||||||||||||| ||||    
T  47188761 gtttcaacaacattttgactttttagaagttaaatttatcacttttcaccattttccaatactat 47188697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 3769831 - 3769897
Alignment:
Q  21 aacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta 87  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||||| |||||| || ||||||    
T  3769831 aacaatattttaacttttaaaaagtcaaatttatcacttttcaccatttttcaatgcaatatttcta 3769897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 35675284 - 35675211
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| || |||| ||||| | || ||||||||||    
T  35675284 ttcaacaatattttaacttttaaaaagttaaattcatcacttttcactatttcccaatacaatatttctatttt 35675211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 54339126 - 54339246
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    ||||||| || ||||| ||||||||||| |||||||||||| |||| |||||||| ||||| ||| ||| || ||||||||| |||||||||| | |||     
T  54339126 gtttcaaaaatattttgacttttaaaaaattaaatttatca-ttttcaccatttttcaatgttatatttatatttttatccctttatccaatgccccaac 54339224  T
Q  115 ggcaatgattggcattctctat 136  Q
    | ||||| || |||||||||||    
T  54339225 gacaatggttagcattctctat 54339246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 35511264 - 35511201
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||| | || ||||||||||    
T  35511264 ttttaacttttaaaaagtcaaattcatcacttttcaccattttccaatacaatatttctatttt 35511201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 31487754 - 31487840
Alignment:
Q  36 tttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 121  Q
    |||||||||| ||||||||||||||| || ||||| ||||||||| ||| || |||||||||||||| |||||   |||||||||||    
T  31487754 tttaaaaagtcaaatttatcacttttaactatttttcaatgctatatttttatttttatccccttattcaatgctccaagggcaatg 31487840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 32584613 - 32584560
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 71  Q
    |||||||| |||||||||||||||||||| |||| || ||||||||||||||||    
T  32584613 ttcaacaatattttaacttttaaaaagttgaattcattactttttaccattttc 32584560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 45088087 - 45088144
Alignment:
Q  23 caacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 80  Q
    ||||||||| ||||| ||||| ||||||||||||||||| | ||||||||||||||||    
T  45088087 caacattttgactttcaaaaaattaaatttatcacttttcatcattttccaatgctat 45088144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 51018473 - 51018400
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||  |||||| |||||||||||||||||  |||||||| |||||||| |||||| || ||||||||||    
T  51018473 ttcaacaatgttttaatttttaaaaagttaaattcttcacttttcaccatttttcaatgcaatgtttctatttt 51018400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 52341616 - 52341672
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 74  Q
    |||||||||||||| ||||||||||||||||||| |||| |||| | ||||||||||    
T  52341616 ttcaacaacattttgacttttaaaaagttaaattcatcatttttcatcattttccaa 52341672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 35927368 - 35927309
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 77  Q
    |||||||| ||||||||||||||||||||||||| |||  |||| ||||||||| |||||    
T  35927368 ttcaacaatattttaacttttaaaaagttaaattcatcgtttttcaccattttctaatgc 35927309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 52021047 - 52021106
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 77  Q
    |||||||| |||||||| ||||||||||||||||||||| |||||||  |||| ||||||    
T  52021047 ttcaacaatattttaacatttaaaaagttaaatttatcattttttacagtttttcaatgc 52021106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 13966574 - 13966648
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttta 92  Q
    |||||||| || | |||||||||||||| ||||| || | |||||||||||||||||||| || ||| |||||||    
T  13966574 ttcaacaatatgtcaacttttaaaaagtcaaattcattattttttaccattttccaatgcaatatttatatttta 13966648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 30617964 - 30618054
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctat-tttatccccttatccaatg 107  Q
    |||||||| |||| |||||||||||||||||||| ||  ||||| | ||||| ||||||| || ||||||| ||||||| |||| ||||||    
T  30617964 ttcaacaatatttgaacttttaaaaagttaaattcattgcttttcatcatttcccaatgcaatatttctatgtttatcctcttaaccaatg 30618054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 40436094 - 40436188
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgcta-tctttctattttatccccttatccaatgtc 109  Q
    |||||||||| ||||| |  ||||||||||||||||||| | |||| | ||||||  ||||||| | ||||  ||||||||||||||||||||||    
T  40436094 gtttcaacaatattttgatatttaaaaagttaaatttattatttttcatcattttttaatgctattttttcatttttatccccttatccaatgtc 40436188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 1457629 - 1457584
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcacttttta 63  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||||    
T  1457629 ttcaacaatattttaacttttaaaaaattaaatttatcaattttta 1457584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 30199880 - 30199807
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||| || ||||||||||||||||| |||| || ||||||||||| |||||| |||||| || ||| ||||||    
T  30199880 ttcaataatattttaacttttaaaaaattaatttcatcactttttatcatttttcaatgcaatatttatatttt 30199807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 39418212 - 39418155
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    ||||||||  |||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  39418212 ttcaacaattttttaacttttaaaaagtcaaacatatcactttttaccattatccaat 39418155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 46823488 - 46823544
Alignment:
Q  19 tcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||||  |||| ||||||||||||||||||| || |||||| |||||||||||||    
T  46823488 tcaacaattttttgacttttaaaaagttaaattcataacttttcaccattttccaat 46823544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 966597 - 966656
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 77  Q
    |||||||| ||||||| ||||||||||||||||| || | |||||| |||||| ||||||    
T  966597 ttcaacaatattttaatttttaaaaagttaaattcataattttttatcatttttcaatgc 966656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 49483122 - 49483169
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||||||| ||||||| |||| |||||||||| |||||||||||||    
T  49483122 ttttaactttgaaaaagtcaaatctatcacttttcaccattttccaat 49483169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 11996182 - 11996140
Alignment:
Q  33 acttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    ||||||| |||||||||| |||||||||| |||||||||||||    
T  11996182 acttttagaaagttaaatctatcacttttcaccattttccaat 11996140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 27545877 - 27545950
Alignment:
Q  18 ttcaacaacattttaactttt-aaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||| ||||||| |||| ||||||||||||| ||||| ||||| |||||| |||||| || ||||||||||    
T  27545877 ttcaacaatattttaagttttcaaaaagttaaattcatcac-ttttatcatttttcaatgcaatatttctatttt 27545950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 13498211 - 13498138
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||  |||| ||||||||||||||||||| |||  | ||||| |||||||||| | || ||||||||||    
T  13498211 ttcaacaaagttttgacttttaaaaagttaaattcatcgttctttactattttccaatacaatatttctatttt 13498138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 23260728 - 23260793
Alignment:
Q  27 attttaacttttaaaaagttaaatttatca-ctttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||  |||||| || ||| ||||||    
T  23260728 attttaacttttaaaaagttaaattcatcagcttttcaccatttctcaatgcaatatttttatttt 23260793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 25928454 - 25928499
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcacttttta 63  Q
    |||||||| |||||||| ||||||| |||||||| |||||||||||    
T  25928454 ttcaacaatattttaacatttaaaacgttaaattcatcacttttta 25928499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 36486780 - 36486723
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    ||||| || ||||| ||||||||||| |||||||  |||||||| |||||||||||||    
T  36486780 ttcaataatattttgacttttaaaaaattaaattcttcacttttcaccattttccaat 36486723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 53484634 - 53484687
Alignment:
Q  22 acaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||||||||||||||| ||||||||||| |||  ||||| ||||||| ||||    
T  53484634 acaacattttaacttttagaaagttaaattcatctttttttcccatttttcaat 53484687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 6e-37; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 40763262 - 40763380
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||||| |||||||||||||||||||| | ||||    
T  40763262 gtttcaacaacattttaacttttaaaaagttaaatttatcacttttcaccatttttcaatgttatatttctatttttatccccttatccaatgccccaag 40763361  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  40763362 ggcaatggttagcattctc 40763380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 24359804 - 24359713
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaat 106  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  24359804 gtttcaacaacattttaacttttaaaaagttaaatttatccctttttaccattttccattgctatatttctatttttatccccttatccaat 24359713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 29034699 - 29034818
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaa 113  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| ||| || |||||||||||||||||||| | |||    
T  29034699 agtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatactatatttatatttttatccccttatccaatgcctcaa 29034798  T
Q  114 gggcaatgattggcattctc 133  Q
    || ||||| || ||||||||    
T  29034799 ggacaatggttagcattctc 29034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 43567602 - 43567496
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||  ||||| ||||||| |||||||||||| | ||||    
T  43567602 gtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatactataattctatttttatctccttatccaatgccccaag 43567503  T
Q  115 ggcaatg 121  Q
    |||||||    
T  43567502 ggcaatg 43567496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 1910257 - 1910374
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatgtcacaagg 115  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||||   |||||||| |||| |  ||||    
T  1910257 gtttcaacaacattttaacttttaaaaagttaaatttatcatttttcaccattttctaatgttatatttctatttttatcccttatcaaatgccctaagg 1910356  T
Q  116 gcaatgattggcattctc 133  Q
    ||||||||| ||||||||    
T  1910357 gcaatgattagcattctc 1910374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 5240428 - 5240308
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| |||| |||| |||||| ||||||||| |||||||||| | ||||    
T  5240428 gtttcaataacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatccctttatccaatgcctcaag 5240329  T
Q  115 ggcaatgattggcattctcta 135  Q
    | ||||| || ||||||||||    
T  5240328 gacaatggttagcattctcta 5240308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 8380454 - 8380545
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaat 106  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||| ||| || |||||||||||||||||||    
T  8380454 gtttcaacaacattttgacttttaaaaagttaaatttatcacttttcatcattttccaatgctatatttttatttttatccccttatccaat 8380545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 3681707 - 3681797
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | ||| || ||||||||||||||||||    
T  3681707 gtttcaacaacattttaacttttaaaaagttaaatttatcacttttcaccattttccaatgttgtatttttatttttatccccttatccaa 3681797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 7323049 - 7322931
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||| | ||| |||||| |||||||| |||||||||| || ||||    
T  7323049 gtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccatttttcaaggttatatttctatttttatcctcttatccaatatctcaag 7322950  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  7322949 ggcaatggttagcattctc 7322931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 8292759 - 8292876
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagg 115  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||| |||||||||||||||||| |||||| ||||||||||||||||||||   ||| |    
T  8292759 tttcaacaacattttgacttttaaaaaggcaaatttataacttttcaccattttccaatgctatatttctatttttatccccttatccaatgctccaaag 8292858  T
Q  116 gcaatgattggcattctc 133  Q
     |||||||| ||||||||    
T  8292859 acaatgattagcattctc 8292876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 46478652 - 46478537
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaa 113  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||| || ||||| ||||| ||| |||||| |||||||||||||||||||||   ||    
T  46478652 agtttcaacaatattttaacttttaaaaagttaaatttatca-ttttcactatttttcaatgatatatttctatttttatccccttatccaatgt---aa 46478557  T
Q  114 gggcaatgattggcattctc 133  Q
    ||||||||||| ||||||||    
T  46478556 gggcaatgattagcattctc 46478537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 27053589 - 27053471
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||  ||||||| |||||| ||||||||| |||||||||| |  |||    
T  27053589 gtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttctgatgctatatttctatttttatccctttatccaatgccctaag 27053490  T
Q  115 ggcaatgattggcattctc 133  Q
    | |||||||| | ||||||    
T  27053489 gacaatgattagtattctc 27053471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 42222234 - 42222328
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtc 109  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| | || |||||| ||||||||||||||| ||||||    
T  42222234 gtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttccaataccatatttctatttttatccccttatctaatgtc 42222328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 22521599 - 22521691
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||||||||||||||| |||||||| |||||||||||||||||| | | |||||||||||||||| |||||| |||||||| |||||||||||    
T  22521599 gtttcaacaacattttgacttttaagaagttaaatttatcacttctcatcattttccaatgctatatttctagttttatcctcttatccaatg 22521691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 133
Target Start/End: Complemental strand, 30538569 - 30538458
Alignment:
Q  23 caacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 121  Q
    ||||||||| | |||||||||||||||||||||| |||| || |||||| ||| |||| |||||| ||||||||||||||| |||||| ||||| |||||    
T  30538569 caacattttgatttttaaaaagttaaatttatcatttttcactattttctaatactatatttctatttttatccccttatctaatgtcccaaggacaatg 30538470  T
Q  122 attggcattctc 133  Q
    ||| ||||||||    
T  30538469 attagcattctc 30538458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 48454907 - 48454812
Alignment:
Q  27 attttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 121  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| |||||| ||| |||||| |||||||||||||||||||| | |||||| ||||    
T  48454907 attttgacttttaaaaagttaaatttatcacttttcaccatttcccaatgttatatttctatttttatccccttatccaatgccccaagggtaatg 48454812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 133
Target Start/End: Complemental strand, 5348061 - 5347950
Alignment:
Q  23 caacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt-tatccccttatccaatgtcacaagggcaatg 121  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||||||||| ||| ||||||||| ||| ||||||| ||||| |  ||||| ||||    
T  5348061 caacattttgacttttaaaaagttaaatttatcacttttcatcattttccaatgttatatttctatttatattcccttattcaatgccctaagggtaatg 5347962  T
Q  122 attggcattctc 133  Q
     || ||||||||    
T  5347961 gttagcattctc 5347950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 36279139 - 36279250
Alignment:
Q  23 caacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 121  Q
    ||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||| ||| || ||||||||  |||||||||| | |||| | ||||    
T  36279139 caacattttgatttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttatatttttatcctattatccaatgccccaagagtaatg 36279238  T
Q  122 attggcattctc 133  Q
     || ||||||||    
T  36279239 gttagcattctc 36279250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 41188881 - 41188790
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||||||| |||||| ||||||||||||||||||||||||| ||| |||||||||||||||||| ||| || |||||||| |||||| ||||    
T  41188881 tttcaacagcattttgacttttaaaaagttaaatttatcacctttcaccattttccaatgctatatttatatttttatcctcttatcaaatg 41188790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 29687489 - 29687547
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 74  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  29687489 gtttcaacaacattttaacttttaaaaagttaaattcatcacttttcaccattttccaa 29687547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 22707062 - 22707179
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatgtcacaagg 115  Q
    ||||||||||||| |||||||||||||||| |||||||||| |||| |  ||||||||||||||| ||||||||||   || |||| ||||| | ||| |    
T  22707062 gtttcaacaacatgttaacttttaaaaagtaaaatttatcatttttcattattttccaatgctatatttctatttttatcctttattcaatgccccaaag 22707161  T
Q  116 gcaatgattggcattctc 133  Q
    |||||| || ||||||||    
T  22707162 gcaatggttagcattctc 22707179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 40067012 - 40066921
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||| ||||||||||||  |||||||||||||||||||||| |||| |||||||| ||||  ||| |||||| ||||||||||||||||||||    
T  40067012 gttttaacaacattttat-ttttaaaaagttaaatttatcatttttcaccatttttcaatattatatttctatttttatccccttatccaatg 40066921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 32204197 - 32204270
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||| || ||||||||||||||||||||||||| ||||||||| | |||||| |||||| || ||||||||||    
T  32204197 ttcaaaaatattttaacttttaaaaagttaaattcatcacttttcatcatttttcaatgcaatatttctatttt 32204270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 49069568 - 49069660
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||||||||| || || | ||||||||||||| ||||||||||||| |||||||| |||| |||| |||||| |||||||  |||||||||||    
T  49069568 gtttcaacaatatattgatttttaaaaagttagatttatcacttttcaccatttttcaatactatatttctatttttatcttcttatccaatg 49069660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 46042761 - 46042835
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||||||||||  ||||| |||||||||||||||| |||||| |||||||| |||| |||| ||||||||||    
T  46042761 gtttcaacaacatttagactttaaaaaagttaaatttataacttttcaccatttt-caatactatatttctatttt 46042835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 31626137 - 31626083
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 70  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| | ||||||    
T  31626137 gtttcaacaacattttgatttttaaaaagttaaatttatcacttttcatcatttt 31626083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 8258734 - 8258634
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||| | ||| ||||||||||||||||||||||||| |||||||| ||     || |||||| |||||||||||||||| ||| | ||||    
T  8258734 gtttcaacaaaattatgactattaaaaagttaaatttatcacttttcaccatttttca-----atatttctatttttatccccttatccgatgccccaag 8258640  T
Q  115 ggcaat 120  Q
    ||||||    
T  8258639 ggcaat 8258634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 40194839 - 40194884
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttt 61  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||    
T  40194839 gtttcaacaacattttgacttttaaaaaattaaatttatcactttt 40194884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 43958168 - 43958087
Alignment:
Q  27 attttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    ||||| ||||||||||| |||||||||||| |||| || |||||| ||| |||| |||||| ||||||| ||||||||||||    
T  43958168 attttgacttttaaaaaattaaatttatcatttttcacaattttctaatactatatttctatttttatcgccttatccaatg 43958087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 40774336 - 40774264
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 90  Q
    |||| ||| ||||||||||||||||||||||||| |||| |||| | |||||| |||||| || |||||||||    
T  40774336 ttcatcaatattttaacttttaaaaagttaaattcatcaattttcatcatttttcaatgcaatatttctattt 40774264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 4686127 - 4686080
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  4686127 ttttaacttttaaaaagttaaattaatcacttttcaccatttttcaat 4686080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 30388755 - 30388697
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||| || ||||| |||||||||||||||||||||||| |||| |||||||| ||||    
T  30388755 tttcaataatattttgacttttaaaaagttaaatttatcatttttcaccatttttcaat 30388697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 31360363 - 31360313
Alignment:
Q  41 aaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||||||||||||||||||||||| ||||| | || ||||||||||    
T  31360363 aaagttaaatttatcactttttaccatttcccaatacaatatttctatttt 31360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 6548547 - 6548603
Alignment:
Q  20 caacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 76  Q
    |||||| ||||||||||||||||||||||||| |||| |||| ||| ||| ||||||    
T  6548547 caacaatattttaacttttaaaaagttaaattcatcatttttcaccgtttcccaatg 6548603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 35239873 - 35239829
Alignment:
Q  26 cattttaacttttaaaaagttaaatttatcactttttaccatttt 70  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||||    
T  35239873 cattttaacttttaaaaagttaaattcatcacgttttatcatttt 35239829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 3720198 - 3720135
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||||||||||||||||||||||| |||  |||||||  |||||| || || |||||||    
T  3720198 ttttaacttttaaaaagttaaatttatcattttacaccatttgtcaatgcaatattactatttt 3720135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 5543061 - 5543112
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 69  Q
    ||||||||  |||||||||||||||||| |||| |||||||||| |||||||    
T  5543061 ttcaacaattttttaacttttaaaaagtcaaatatatcacttttcaccattt 5543112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 35003630 - 35003673
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttttaccattttc 71  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||    
T  35003630 ttttaatttttaaaaagttaaattaatcacttttcaccattttc 35003673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 43189731 - 43189688
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttt 61  Q
    |||||||| ||||||||||||||||||| ||||| |||||||||    
T  43189731 ttcaacaatattttaacttttaaaaagtcaaattcatcactttt 43189688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 44391019 - 44391082
Alignment:
Q  27 attttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 90  Q
    ||||||||||||||||||| ||||| || | ||||||| |||||| ||||| || |||||||||    
T  44391019 attttaacttttaaaaagtcaaattcataattttttacaattttctaatgcaatatttctattt 44391082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 44296995 - 44296945
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatt 68  Q
    |||||| | ||||||||||||||||| ||||||| ||||||||| ||||||    
T  44296995 ttcaacgatattttaacttttaaaaacttaaattcatcacttttcaccatt 44296945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 16931906 - 16931962
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||||| ||||| |||||||||||||||||||  |||| |||||| ||||||||||    
T  16931906 ttcaacaatattttgacttttaaaaagttaaattattcac-ttttactattttccaat 16931962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 16937289 - 16937345
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||||| ||||| |||||||||||||||||||  |||| |||||| ||||||||||    
T  16937289 ttcaacaatattttgacttttaaaaagttaaattattcac-ttttactattttccaat 16937345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 18800242 - 18800197
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcacttttta 63  Q
    |||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  18800242 ttcaacaatattgtaatttttaaaaagttaaatttatcactcttta 18800197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 46423388 - 46423425
Alignment:
Q  33 acttttaaaaagttaaatttatcactttttaccatttt 70  Q
    |||||||| || ||||||||||||||||||||||||||    
T  46423388 acttttaagaaattaaatttatcactttttaccatttt 46423425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 48879685 - 48879742
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||||| ||||||||||||||||| |||||||  |||||||| || |||| |||||    
T  48879685 ttcaacaatattttaacttttaaaaaattaaattcttcacttttcactatttcccaat 48879742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 5977809 - 5977757
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 70  Q
    ||||||||  |||||||||||||||||||||||  ||||||||| || |||||    
T  5977809 ttcaacaattttttaacttttaaaaagttaaatccatcacttttcactatttt 5977757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 34874580 - 34874698
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||| | ||||    
T  34874580 gtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttccaatgctatatttctatttttatccccttatccaatgccccaag 34874679  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  34874680 ggcaatggttagcattctc 34874698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 27209814 - 27209696
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||| |||||| ||||||||| |||||||||| | ||||    
T  27209814 gtttcaacaacattttaacttttaaaaagttaaatttatcaattttcaccattttccaatgttatatttctatttttatccctttatccaatgccccaag 27209715  T
Q  115 ggcaatgattggcattctc 133  Q
    | ||||| || ||||||||    
T  27209714 gacaatggttagcattctc 27209696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 11385903 - 11385797
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||| |||| |||||| ||||||||||||||||||||   ||||    
T  11385903 gtttcaacaacattttgacttttaaaaagttaaatttataacttttcaccattttccaatactatatttctatttttatccccttatccaatgctgcaag 11385804  T
Q  115 ggcaatg 121  Q
    |||||||    
T  11385803 ggcaatg 11385797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 11385994 - 11386100
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||  ||||| |||||| ||||    
T  11385994 gtttcaacaacattttgacttttaaaaagttaaatttatcaatttttaccattttccaatgctatatttctatttttatccaattatctaatgtcccaag 11386093  T
Q  115 ggcaatg 121  Q
    | |||||    
T  11386094 gacaatg 11386100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 41147571 - 41147453
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||| ||||||||| |||||| |||||||||||||||||||| | ||||    
T  41147571 gtttcaacaatattttgacttttaaaaagttaaattaatcattttttaccatttttcaatgctatatttctatttttatccccttatccaatgccccaag 41147472  T
Q  115 ggcaatgattggcattctc 133  Q
    | ||||| || ||||||||    
T  41147471 gacaatggttagcattctc 41147453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 47655464 - 47655346
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| |||||||| |||||||||  ||||| |||||||||||||| |||||||  |||    
T  47655464 gtttcaacaacattttgacttttaaaaagttaaatttatcaattttcaccatttttcaatgctatacttctatttttatccccttattcaatgtcttaag 47655365  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  47655364 ggcaatggttagcattctc 47655346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 4940833 - 4940741
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||    
T  4940833 gttttaacaatattttgacttttaaaaagttaaatttatcacttttaaccattttccaatgctatatttctatttttatccccttatccaatg 4940741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 40845264 - 40845379
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| | ||||||||||||||||||||||||||| |||||||| |||| |||| |||||| |||||||||||||| ||||||| ||||    
T  40845264 gtttcaacaatattttgatttttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatccccttattcaatgtctcaag 40845363  T
Q  115 ggcaatgattggcatt 130  Q
    ||||||| || |||||    
T  40845364 ggcaatggttagcatt 40845379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 2125800 - 2125682
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||| |||||| |||||||||||||||||||| | ||||    
T  2125800 gtttcatcaacattttgacttttaaaaagttaaatttatcacttttcacaatttttcaatgctatatttctatttttatccccttatccaatgccccaag 2125701  T
Q  115 ggcaatgattggcattctc 133  Q
      ||||| || ||||||||    
T  2125700 aacaatggttagcattctc 2125682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 32213982 - 32213876
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| | | |||||| ||||||||||||||| |||||| ||||    
T  32213982 gtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttccaatgttctatttctatttttatccccttatctaatgtcccaag 32213883  T
Q  115 ggcaatg 121  Q
     ||||||    
T  32213882 agcaatg 32213876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 43433788 - 43433906
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  ||| |||| |||||| |||||||||||||||||||| | ||||    
T  43433788 gtttcaacaacattttaatttttaaaaagttaaatttatcacttttcaccattttttaatactatatttctatttttatccccttatccaatgccccaag 43433887  T
Q  115 ggcaatgattggcattctc 133  Q
     |||||  || ||||||||    
T  43433888 agcaatagttagcattctc 43433906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 49508826 - 49508721
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    ||||| |||| ||||| ||||||||||||||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||||||||||| | ||||    
T  49508826 gtttcgacaatattttgacttttaaaaagttaaatttatcac-tttcaccattttccaatgctatatttctatttttatccccttatccaatgccccaag 49508728  T
Q  115 ggcaatg 121  Q
    |||||||    
T  49508727 ggcaatg 49508721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 4656028 - 4656149
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaa 113  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||| ||| || ||||||  |||||||||||||  | |    
T  4656028 agtttcaacaacattttaatttttaaaaagttaaatttatcactttttactattttccaatgttatatttttatttttatttccttatccaatgttccga 4656127  T
Q  114 gggcaatgattggcattctcta 135  Q
     ||||||||||  |||||||||    
T  4656128 aggcaatgattaacattctcta 4656149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 7190569 - 7190450
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaa 113  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| | ||||||  |||||||| |||||| |||||||| |||| |||||| | |||    
T  7190569 agtttcaacaccattttaacttttaaaaagttaaatttatcacttttcatcatttttgaatgctatatttctatttttatcctcttaaccaatgccccaa 7190470  T
Q  114 gggcaatgattggcattctc 133  Q
    |||||| | || ||||||||    
T  7190469 gggcaaaggttagcattctc 7190450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 42607417 - 42607326
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaat 106  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||| ||| || |||||||||||||||||||    
T  42607417 gtttcaacaacattttgacttttaaaaagttaaatttatcatttttcaccatttttcaatgctatatttttatttttatccccttatccaat 42607326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 49901939 - 49902030
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaat 106  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |||| |||||| |||||||| ||||||||||    
T  49901939 gtttcaacaacgttttaacgtttaaaaagttaaatttatcacttttcaccattttccaatactatatttctatttttatcctcttatccaat 49902030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 932251 - 932141
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaa 113  Q
    ||||||||||||||||| ||||||||||| |||||||||| | |||| | |||||||||||||||| |||||| |||||||||||||||||||| | |||    
T  932251 agtttcaacaacattttgacttttaaaaaattaaatttataatttttcatcattttccaatgctatatttctatttttatccccttatccaatgccccaa 932152  T
Q  114 gggcaatgatt 124  Q
    |  ||||||||    
T  932151 gaacaatgatt 932141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 22346330 - 22346212
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||| |||||||| |||| |||| |||||| |||||| ||||||||||| | | ||||    
T  22346330 gtttcaacaatattttgacttttaaaaaattaaatttatcacttttcaccatttttcaatactatatttctatttttattcccttatccaaagccccaag 22346231  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  22346230 ggcaatggttagcattctc 22346212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 28277574 - 28277484
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaat 106  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||| |||||| |||||||| ||||||||||    
T  28277574 tttcaacaacattttaatttttaaaaagttaaatttatcactttttatcatttttcaatgttatatttctatttttatcctcttatccaat 28277484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 33929979 - 33930070
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaat 106  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| || ||||| ||||||||| ||| || |||||||||||||||||||    
T  33929979 gtttcaacaacattttgacttttaaaaagttaaatttatcagttttcactatttttcaatgctatatttatatttttatccccttatccaat 33930070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 50295525 - 50295434
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||| |||| |||||| ||||| ||||||||||||||    
T  50295525 tttcaacaatattttgacttttaaaaagttaaatttatcacttttcactattttccaatactatatttctatttttacccccttatccaatg 50295434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 28850991 - 28850885
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattgg 126  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||| ||| |||||| |||||| | |||||| |||| | ||||||||||| || |    
T  28850991 ttttgacttttaaaaagttaaatttatcacttttcaccattttccaatgttatatttctatttttattctcttatctaatgccccaagggcaatggttag 28850892  T
Q  127 cattctc 133  Q
    |||||||    
T  28850891 cattctc 28850885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 6170644 - 6170569
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||  | ||||||||||||||| ||||||||||    
T  6170644 gtttcaacaacattttgacttttaaaaagttaaatttatcatttttctctattttccaatgctatatttctatttt 6170569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 50154486 - 50154561
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| ||||||||| ||| ||||||    
T  50154486 gtttcaacaacattttaacttttaaaaggttaaatttatcattttttatcatttttcaatgctatatttatatttt 50154561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 24140786 - 24140903
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| ||||| |||||||||| |||||||| ||| |||||||||||||  ||| |||||| |||||||||||||| ||||| | |||     
T  24140786 gtttcaacaacattttgactttaaaaaagttaagtttatcacgtttcaccattttccaatagtatatttctatttttatccccttat-caatgccccaaa 24140884  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  24140885 ggcaatggttagcattctc 24140903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 41898950 - 41898878
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 90  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||| | || |||||||||    
T  41898950 ttcaacaatattttaacttttaaaaagttaaattcatcactttttaccatttttcaatacaatatttctattt 41898878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 45721773 - 45721857
Alignment:
Q  24 aacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||||||||| ||| ||| || ||||||| ||||||||||||    
T  45721773 aacattttgatttttaaaaagttaaatttatcagtttttaccattttccaatgttatatttttatttttatcaccttatccaatg 45721857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 52396456 - 52396547
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    ||||||| || ||||| ||||||||||||||||||||||||| ||||| |||||| |||| |||| |||||| ||||||||||||||||||||    
T  52396456 gtttcaataatattttgacttttaaaaagttaaatttatcac-ttttatcatttttcaatactatatttctatttttatccccttatccaatg 52396547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 31975499 - 31975618
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt-tatccccttatccaatgtcacaa 113  Q
    ||||| ||||| ||||| | ||||||||||||||||||| ||||||||| |||||| ||||| ||| ||||||||| |||| | |||||||||  | |||    
T  31975499 agttttaacaatattttgatttttaaaaagttaaatttaccactttttatcatttttcaatgttatatttctatttatatctctttatccaatacctcaa 31975598  T
Q  114 gggcaatgattggcattctc 133  Q
    |||||||| || ||||||||    
T  31975599 gggcaatggttagcattctc 31975618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 26469675 - 26469557
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    ||||||| || ||||| |||||||||||||||||||||||| |||| |  ||||| ||||||||| ||| || ||||||||| ||||||||| |  ||||    
T  26469675 gtttcaataatattttgacttttaaaaagttaaatttatcatttttcattatttttcaatgctatatttttatttttatccctttatccaatattccaag 26469576  T
Q  115 ggcaatgattggcattctc 133  Q
    |||| ||||| ||||||||    
T  26469575 ggcagtgattagcattctc 26469557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 29966835 - 29966928
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaag-ttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||||||||| ||||| ||||| |||||  |||||||||||| ||||| ||||||| ||||||||| ||| || ||||||||||||||||||||    
T  29966835 gtttcaacaatattttgactttaaaaaaaattaaatttatcattttttgccatttttcaatgctatatttatatttttatccccttatccaatg 29966928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 41492924 - 41493013
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatg 107  Q
    |||| ||| |||||||||||||||| || ||||| ||||||||| |||| || ||||||| || |||||||||||||| |||| ||||||    
T  41492924 ttcatcaatattttaacttttaaaatgtaaaattcatcacttttcaccacttcccaatgcaatatttctattttatcctcttaaccaatg 41493013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 17402963 - 17403015
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 70  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  17402963 ttcaacaatattttgacttttaaaaagttaaattcatcactttttaccatttt 17403015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 47895346 - 47895411
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 80  Q
    ||||||||||| ||||| || |||||||||||||||||||||| ||| |||||||| |||| ||||    
T  47895346 agtttcaacaatattttgacatttaaaaagttaaatttatcacctttcaccatttttcaatactat 47895411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 40920200 - 40920294
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttat--cactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtc 109  Q
    |||||||| ||||||||||||||||||||||||| ||  ||||||| |||| ||  |||||| || |||||| |||||||| |||| ||||||||    
T  40920200 ttcaacaatattttaacttttaaaaagttaaattaatcacacttttcaccacttctcaatgcaatatttctatttttatcctcttaaccaatgtc 40920294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 5945450 - 5945508
Alignment:
Q  33 acttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||  || ||||||||||    
T  5945450 acttttaaaaagtaaaatttatcacttttcaccatttttcaatgtcatatttctatttt 5945508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 8244128 - 8244207
Alignment:
Q  39 aaaaagttaaatttatcactttttaccattttccaatgctatctttctat-tttatccccttatccaatgtcacaagggcaatg 121  Q
    ||||||||||||||||||    ||| |||||||||||| ||| ||||||| ||||||||||||||||||| | |||| ||||||    
T  8244128 aaaaagttaaatttatca----ttatcattttccaatgttatatttctatatttatccccttatccaatgccccaagagcaatg 8244207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 16691309 - 16691382
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||  |||| |||||||||||||||||||  ||| |||||||||||| ||||| | || ||||||||||    
T  16691309 ttcaacaatgttttgacttttaaaaagttaaattcttcattttttaccatttcccaatacaatgtttctatttt 16691382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 8892852 - 8892789
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||| |||||||||||||||||||  | |||||| ||||||||||||| | || ||||||||||    
T  8892852 ttttgacttttaaaaagttaaattctttacttttcaccattttccaatacgatgtttctatttt 8892789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 27210750 - 27210792
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttttaccatttt 70  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  27210750 ttttaacttttaaaaagttaaattgatcatttttcaccatttt 27210792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 44043500 - 44043538
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttttacca 66  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  44043500 ttttgacttttaaaaagttaaatatatcactttttacca 44043538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 14331852 - 14331925
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||  |||| |||||||||||||||||||  ||| |||| ||||||| ||||| | || ||||||||||    
T  14331852 ttcaacaatgttttgacttttaaaaagttaaattcttcatttttcaccatttcccaatacaatgtttctatttt 14331925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 30222633 - 30222678
Alignment:
Q  16 gtttcaacaacattttaactttt-aaaaagttaaatttatcacttt 60  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||    
T  30222633 gtttcaacaatattttaactttttaaaaaattaaatttatcacttt 30222678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 43168156 - 43168229
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||  |||| ||||||||||||||||| |  |||||||| ||||||| ||||| | || ||||||||||    
T  43168156 ttcaacaatgttttgacttttaaaaagttaaactcttcacttttcaccatttcccaatacaatgtttctatttt 43168229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 44359763 - 44359690
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||  |||| |||||||||||||||||||  |||||||| ||||||| || || | || ||||||||||    
T  44359763 ttcaacaatgttttgacttttaaaaagttaaattcttcacttttcaccatttcccgatacaatgtttctatttt 44359690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 46296276 - 46296231
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcacttttta 63  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||    
T  46296276 ttcaacaatattttgacttttaaaaagttaaatttattatttttta 46296231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 48938651 - 48938723
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||  |||| |||||||||||| ||||||| |||||||| ||||||||| ||| | || ||||||||||    
T  48938651 ttcaacaatgttttgacttttaaaaag-taaatttttcacttttcaccattttctaatacaatatttctatttt 48938723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 51424172 - 51424245
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||  ||||||| |||||||||||||||| |||||||||  | ||||| |||| | || ||||||||||    
T  51424172 ttcaacaatgttttaacctttaaaaagttaaattcatcacttttagcaatttttcaatacaatatttctatttt 51424245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 23328437 - 23328493
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 74  Q
    ||||||||  ||||||||||||||||||  | | ||||||||||||| |||||||||    
T  23328437 ttcaacaattttttaacttttaaaaagtctagtctatcactttttactattttccaa 23328493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 8847547 - 8847440
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagg 115  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||     
T  8847547 tttcaacaatattttaacttttaaaaagttaaattaatcactttttaccattttccaatgttatatttctatttttatccccttatccaatgtcccaagt 8847448  T
Q  116 gcaatgat 123  Q
    ||||||||    
T  8847447 gcaatgat 8847440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 8715597 - 8715480
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatgtcacaagg 115  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||||||||| |  ||||    
T  8715597 gtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttctatttttaccccttatccaatgccctaagg 8715498  T
Q  116 gcaatgattggcattctc 133  Q
     ||||| || ||||||||    
T  8715497 acaatggttagcattctc 8715480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 9067484 - 9067367
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatgtcacaagg 115  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||||||||| |  ||||    
T  9067484 gtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttctatttttaccccttatccaatgccctaagg 9067385  T
Q  116 gcaatgattggcattctc 133  Q
     ||||| || ||||||||    
T  9067384 acaatggttagcattctc 9067367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 36730249 - 36730131
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| |||| ||| || |||||||||||||||||||| || |||    
T  36730249 gtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatactatatttatatttttatccccttatccaatgccataag 36730150  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  36730149 ggcaatggttagcattctc 36730131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 25102417 - 25102300
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||||||||| ||||| |||| ||||||||||||||||||||||||||||||| |||||| ||||||| | |||||||||||| ||||    
T  25102417 gtttcaacaatattttaactttaaaaaaattaa-tttatcactttttaccattttccaatgctatatttctatttttatctcattatccaatgtcccaag 25102319  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  25102318 ggcaatggttagcattctc 25102300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 32415582 - 32415700
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| || ||||| ||||||||| |||||| ||||||||| |||||||||| | ||||    
T  32415582 gtttcaacaacattttgacttttaaaaagttaaatttatgacttttcacaatttttcaatgctatatttctatttttatccctttatccaatgcctcaag 32415681  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||||||  |||||||    
T  32415682 ggcaatgattaacattctc 32415700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 10854872 - 10854985
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt-----atccccttatccaatgtca 110  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||| |||     |||||||||||||||| |     
T  10854872 gtttcaacaacattttaacttttaaaaagttaaatttattagttttcaccattttccaatgctatatttctacttttatccatccccttatccaatgccc 10854971  T
Q  111 caagggcaatgatt 124  Q
    ||||||||||||||    
T  10854972 caagggcaatgatt 10854985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 35306346 - 35306451
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagg 115  Q
    |||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||| |||||||||||||||||||  | |||||    
T  35306346 tttcaataacattttaacttttaaaaagttaaatttatcacttttcatcattttccaatgttatatttctatttttatccccttatccaattgcccaagg 35306445  T
Q  116 gcaatg 121  Q
    ||||||    
T  35306446 gcaatg 35306451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 44570481 - 44570364
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt-atccccttatccaatgtcacaagg 115  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||| |||||||||| ||||| ||||| |||| | |||||    
T  44570481 tttcaacaacattttgacttttaaaaagttaaagttatcacttttcaccattttccaatgttatatttctattttgatccctttatcgaatgccccaagg 44570382  T
Q  116 gcaatgattggcattctc 133  Q
    |||||| || ||||||||    
T  44570381 gcaatggttagcattctc 44570364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 46317499 - 46317624
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| | |||||||||||| ||| |||||| |||||||  ||||||||||||| ||||    
T  46317499 gtttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcattttccaatgttatatttctatttttatctacttatccaatgtctcaag 46317598  T
Q  115 ggcaatgattggcattctctatcttt 140  Q
    ||||||| || |||||| || |||||    
T  46317599 ggcaatggttagcattccctttcttt 46317624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 4759946 - 4759854
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||| ||||||||||    
T  4759946 gtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatgctatatttctatttttatccctttatccaatg 4759854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 29915671 - 29915553
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||| ||||||| |||||||||||||||||||||| | |||||||||||||||||| |||| ||| || |||||||||||||||||| | | ||||    
T  29915671 gtttcaaccacattttgacttttaaaaagttaaatttataattttttaccattttccaatactatatttttatttttatccccttatccaacgccccaag 29915572  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  29915571 ggcaatggttagcattctc 29915553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 29964824 - 29964706
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||| ||||||| |||||||||||||||||||||| | |||||||||||||||||| |||| ||| || |||||||||||||||||| | | ||||    
T  29964824 gtttcaaccacattttgacttttaaaaagttaaatttataattttttaccattttccaatactatatttttatttttatccccttatccaacgccccaag 29964725  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  29964724 ggcaatggttagcattctc 29964706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 44695766 - 44695649
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagg 115  Q
    ||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||   ||| ||| || |||||||||||||||||||||| ||| |    
T  44695766 tttcaacaacattttaatttttaaaaagttaaatttatcatttttcaccattttccaagattatatttatatttttatccccttatccaatgtcccaatg 44695667  T
Q  116 gcaatgattggcattctc 133  Q
     |||||||| ||||||||    
T  44695666 acaatgattagcattctc 44695649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 37509124 - 37509251
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||   |||| | |||||||||||||||||||| | |||     
T  37509124 gtttcaacaatattttgacttttaaaaagttaaatttatcacttttcactattttccaatgctgcatttcaatttttatccccttatccaatgccccaaa 37509223  T
Q  115 ggcaatgattggcattctctatctttta 142  Q
    ||||||| || |||||||| || |||||    
T  37509224 ggcaatggttagcattctcaatttttta 37509251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 51817409 - 51817316
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||| || |||||||| ||||| |||||    
T  51817409 agtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttttatttttatcctcttattcaatg 51817316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 52570795 - 52570870
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||||| |||| ||||||||||    
T  52570795 gtttcaacaatattttgacttttaaaaagttatatttatcacttttcaccattttccaatactatatttctatttt 52570870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 1803919 - 1804019
Alignment:
Q  34 cttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattct 132  Q
    |||||| |||||||||||||||| |||||||| |||| ||||  ||| |||||| |||||||||||||||||||| | ||||| |||||||| |||||||    
T  1803919 cttttacaaagttaaatttatcattttttaccctttttcaataatatatttctatttttatccccttatccaatgccccaaggacaatgattagcattct 1804018  T
Q  133 c 133  Q
    |    
T  1804019 c 1804019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 12905378 - 12905292
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatc 102  Q
    |||||||||||||||| |||||||||| ||||||||||||| |||| |||||||| ||||| ||| |||||| |||||||||||||||    
T  12905378 gtttcaacaacattttgacttttaaaatgttaaatttatcatttttcaccatttt-caatgttatatttctatttttatccccttatc 12905292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 20227476 - 20227405
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta 87  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| | |||||| ||||||||| ||||||    
T  20227476 gtttcaataacattttaacttttaagaagttaaatttatcacttttcatcatttttcaatgctatatttcta 20227405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 21324531 - 21324612
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatcccctta 100  Q
    |||||||| |||||||||||||||||||||||| |||||||||| | || |||||||||| || |||||||||||||| ||||    
T  21324531 ttcaacaatattttaacttttaaaaagttaaatctatcacttttcatca-tttccaatgcaatatttctattttatccgctta 21324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 18881 - 18791
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||| ||| ||| ||||||| || |||||| |||||||| |||| ||||||    
T  18881 ttcaacaatattttaatttttaaaaagttaaattcatcacttttcaccgtttcccaatgcaatatttctatttttatcctcttaaccaatg 18791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 12051052 - 12051126
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||||||||||| |||||||||||||||||||||| |||| |  ||||| |||| |||| ||||||||||    
T  12051052 tttcaacaacattttaatttttaaaaagttaaatttatcatttttcattattttacaatactatatttctatttt 12051126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 19022 - 18949
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||| ||| ||| ||||||| || ||||||||||    
T  19022 ttcaacaatattttaatttttaaaaagttaaattcatcacttttcaccgtttcccaatgcaatatttctatttt 18949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 34060860 - 34060803
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  34060860 ttcaacaatattttaacttttaaaaagttaaattcatcacttttcaccatttttcaat 34060803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 26850579 - 26850535
Alignment:
Q  27 attttaacttttaaaaagttaaatttatcactttttaccattttc 71  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||    
T  26850579 attttaacttttaaaaaattaaattcatcactttttaccattttc 26850535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 41345988 - 41346047
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||||||| ||||||||||||||||| |||||||||| |||||| || ||||| ||||    
T  41345988 gtttcaacaatattttaacttttaaaaaattaaatttattacttttcactatttttcaat 41346047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 34750351 - 34750293
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 76  Q
    |||||||| ||||||| || |||||||||||||| ||||||||| |||| |||||||||    
T  34750351 ttcaacaatattttaatttataaaaagttaaattcatcacttttcaccagtttccaatg 34750293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 48136790 - 48136701
Alignment:
Q  44 gttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 133  Q
    |||||||||||||||||  || ||||||||||||||| |||||| |||||| ||||||||||||  | ||||| ||||| || ||||||||    
T  48136790 gttaaatttatcactttc-acaattttccaatgctatatttctatttttattcccttatccaataccccaaggacaatggttagcattctc 48136701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 39974900 - 39974827
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||  ||||||||||||||||||||||||| ||||||| | | ||||||| ||||| || ||| ||||||    
T  39974900 ttcaacactattttaacttttaaaaagttaaattcatcacttctcatcattttctaatgcaatatttttatttt 39974827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 50420699 - 50420744
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcacttttta 63  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||    
T  50420699 ttcaacaattttttaacttttaaaaagttaaatctatcacttttta 50420744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 11316981 - 11317037
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 74  Q
    ||||| || ||||| ||||||||||||||||||| || |||||| ||||||||||||    
T  11316981 ttcaataatattttgacttttaaaaagttaaattcataacttttcaccattttccaa 11317037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 31647318 - 31647362
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttt 61  Q
    |||||| |||||||| |||||||||||||||||||||||| ||||    
T  31647318 tttcaataacattttgacttttaaaaagttaaatttatcattttt 31647362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 45899638 - 45899547
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcacttttt-accattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||||||| ||||| ||||||||||| ||||||| |||||||||| | |||||||||||   || |||||| |||||| | |||||||||||    
T  45899638 ttcaacaatattttgacttttaaaaatttaaattcatcactttttcatcattttccaatataatatttctatttttattctcttatccaatg 45899547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 49976232 - 49976185
Alignment:
Q  21 aacaacattttaacttttaaaaagttaaatttatcactttttaccatt 68  Q
    ||||| ||||| ||||||||||||||||||| ||||||||| ||||||    
T  49976232 aacaatattttgacttttaaaaagttaaattcatcacttttcaccatt 49976185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 6822879 - 6822837
Alignment:
Q  32 aacttttaaaaagttaaatttatcactttttaccattttccaa 74  Q
    ||||||||||||||| |||| |||||||||||||| |||||||    
T  6822879 aacttttaaaaagttgaattcatcactttttaccactttccaa 6822837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 12060153 - 12060096
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    ||||||||  |||||||||||||||| | |||| |||||||||| | |||||||||||    
T  12060153 ttcaacaattttttaacttttaaaaactcaaatctatcacttttcatcattttccaat 12060096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 765246 - 765128
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||| |||||| |||||||||||||||||||| | ||||    
T  765246 gtttcaacaacattttgacttttaaaaagttaaatttatcacttttcacaattttccaatgttatatttctatttttatccccttatccaatgccccaag 765147  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  765146 ggcaatggttagcattctc 765128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 39085887 - 39085773
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagg 115  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| ||||||||| |||||||||||| ||||     
T  39085887 tttcaacaacattttgacttttaaaaagttaaatttatcactttttatcattttccaatgttatatttctatttttatccctttatccaatgtcccaaga 39085788  T
Q  116 gcaatgattggcatt 130  Q
    |||||| || |||||    
T  39085787 gcaatggttagcatt 39085773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 2966553 - 2966647
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtc 109  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  2966553 gtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttccaatgttatatttctatttttatccccttatccaatgtc 2966647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 39401630 - 39401513
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt-atccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| ||||||||||||||||||| ||||||||| |||||||| ||||| ||| |||||||||| |||||||||||||||| | ||||    
T  39401630 gtttcaacaaaattttgacttttaaaaagttaaatt-atcacttttcaccatttttcaatgttatatttctatttttatccccttatccaatgccccaag 39401532  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  39401531 ggcaatggttagcattctc 39401513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 17603825 - 17603933
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagg 115  Q
    |||||| |||||||| |||||||||||||||||||||||| |||||| |||||| ||||||||| |||||| ||||||| | |||||||||| | |||||    
T  17603825 tttcaataacattttgacttttaaaaagttaaatttatcattttttatcatttttcaatgctatatttctatttttatcgcgttatccaatgccccaagg 17603924  T
Q  116 gcaatgatt 124  Q
    |||||||||    
T  17603925 gcaatgatt 17603933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 6999215 - 6999333
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||| |||| |||||| ||||||| ||||||||| || | ||      
T  6999215 gtttcaacaacattttgacttttaaaaagttaaatttatcatttttcaccattttccaatactatatttctatttttatctccttatccattgccccaga 6999314  T
Q  115 ggcaatgattggcattctc 133  Q
     ||||||||| ||||||||    
T  6999315 agcaatgattagcattctc 6999333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 16361579 - 16361684
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    ||||| |||||||||| ||||||| |||||||||||||||| ||||||||||||||||||| ||| |||||| |||||| |||||||||||||   ||||    
T  16361579 gtttcgacaacattttgacttttataaagttaaatttatcaatttttaccattttccaatgttatatttctatttttattcccttatccaatgctccaag 16361678  T
Q  115 ggcaat 120  Q
    ||||||    
T  16361679 ggcaat 16361684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 27495136 - 27495254
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| | |||||||| |||||||||||||||||| ||||||||| |||| ||| ||| || |||||||||||||| ||||| | ||||    
T  27495136 gtttcaacaacattttgatttttaaaatgttaaatttatcacttttcaccattttctaatgttatatttttatttttatccccttattcaatgccccaag 27495235  T
Q  115 ggcaatgattggcattctc 133  Q
     |||||| || ||||||||    
T  27495236 tgcaatggttagcattctc 27495254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 33864368 - 33864474
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| |||||||||| ||||||||||| |||||| ||||||||||||||| || ||| || |||||||| ||||| ||||||| ||||    
T  33864368 gtttcaacaatattttgacttttaaaatgttaaatttattacttttcaccattttccaatgcgatatttttatttttatcctcttattcaatgtctcaag 33864467  T
Q  115 ggcaatg 121  Q
    |||||||    
T  33864468 ggcaatg 33864474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 862602 - 862707
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||||| |||| |||||| ||||||||| |||| ||||| |  |||    
T  862602 gtttcaacaagattttgactcttaaaaagttaaatttatcacttttcaccattttccaatactatatttctatttttatcccattattcaatgccctaag 862701  T
Q  115 ggcaat 120  Q
    ||||||    
T  862702 ggcaat 862707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 1321182 - 1321299
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagg 115  Q
    ||||||||||||||| | ||||||| |||||||||||| | ||||||||||||||||||| ||| |||||| |||||||| |||||||||||   |||||    
T  1321182 tttcaacaacattttgatttttaaagagttaaatttattattttttaccattttccaatgttatatttctatttttatcctcttatccaatgctccaagg 1321281  T
Q  116 gcaatgattggcattctc 133  Q
     ||||| || ||||||||    
T  1321282 acaatggttagcattctc 1321299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 33726394 - 33726498
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagg 115  Q
    ||||||||| ||||||||||||| |||||||||||||| | |||| |||||||| |||| |||| ||| || |||||||||||||||||||| | |||||    
T  33726394 tttcaacaatattttaacttttagaaagttaaatttattatttttcaccatttttcaatactatatttttatttttatccccttatccaatgccccaagg 33726493  T
Q  116 gcaat 120  Q
    |||||    
T  33726494 gcaat 33726498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 44299777 - 44299659
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||| |||||||| | | ||||| |||||| |||||||| |||| |||||| | |||     
T  44299777 gtttcaacaatattttgacttttaaaatgttaaatttatcacttttcaccatttttcgaggctatatttctatttttatcctcttacccaatgccccaaa 44299678  T
Q  115 ggcaatgattggcattctc 133  Q
     ||||||||| ||||||||    
T  44299677 agcaatgattagcattctc 44299659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 9201589 - 9201484
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaaggg 116  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||  |||  ||| || ||| ||||||| | |||||||||||| |||||     
T  9201589 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttttaatattatattcctatttttatctcattatccaatgtctcaagga 9201490  T
Q  117 caatga 122  Q
    ||||||    
T  9201489 caatga 9201484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 2239597 - 2239689
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctat-tttatccccttatccaatgtc 109  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||||||||||| || ||| || ||||||| ||||||| |||| ||||||||    
T  2239597 ttcaacaatattttaacttttaaaaagttaaattcatcattttttaccatttttcattgcaatatttctatctttatcctcttaaccaatgtc 2239689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 13997999 - 13997880
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagg 115  Q
    ||||||||| ||||||| |||||||||||||||||||||| |||| || ||||| ||||||||| |||||| |||||| |||||||| |||  | |||      
T  13997999 tttcaacaatattttaatttttaaaaagttaaatttatcatttttcacaatttttcaatgctatatttctatttttattcccttatctaattcctcaaaa 13997900  T
Q  116 gcaatgattggcattctcta 135  Q
    |||||| || ||||||||||    
T  13997899 gcaatggttagcattctcta 13997880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 17074584 - 17074466
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaa 113  Q
    |||||||||||||||||  |||||||||||||||||||||||||||| ||||||||  | || ||| |||||| ||||||||| ||||| |||| |  ||    
T  17074584 agtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-tagtgttatatttctatttttatccctttatctaatgccctaa 17074486  T
Q  114 gggcaatgattggcattctc 133  Q
    |||||||| || ||||||||    
T  17074485 gggcaatggttagcattctc 17074466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 41436491 - 41436582
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaat 106  Q
    |||||||||||||||| |||||||||||||||| |||||||||||| | |||||| |||| |||| ||| || |||||||||||||| ||||    
T  41436491 gtttcaacaacattttgacttttaaaaagttaagtttatcacttttcatcatttttcaatactatatttttatttttatccccttattcaat 41436582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 44173132 - 44173207
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||||||||||||| ||||||||| |||||||||||| |||| | |||||| ||||||||| ||||||||||    
T  44173132 gtttcaacaacattttaatttttaaaaaattaaatttatcatttttcatcatttttcaatgctatatttctatttt 44173207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 17056153 - 17056036
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttc-tattttatccccttatccaatgtcacaag 114  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| ||||||||  | || ||| |||| | ||||||||| |||||||||| |  |||    
T  17056153 gtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-tagtgttatatttctttttttatccctttatccaatgccctaag 17056055  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  17056054 ggcaatggttagcattctc 17056036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 17068600 - 17068483
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttc-tattttatccccttatccaatgtcacaag 114  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| ||||||||  | || ||| |||| | ||||||||| |||||||||| |  |||    
T  17068600 gtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-tagtgttatatttctttttttatccctttatccaatgccctaag 17068502  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  17068501 ggcaatggttagcattctc 17068483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 17095162 - 17095108
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 70  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  17095162 gtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 17095108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 35445387 - 35445294
Alignment:
Q  16 gtttcaacaacattttaactttt-aaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||||||||| ||||| |||||| ||||||||||||||||||||||| |||||||| ||||| ||| ||| || |||||||||||||| |||||    
T  35445387 gtttcaacaatattttgacttttgaaaaagttaaatttatcacttttcaccatttttcaatgttatatttatatttttatccccttattcaatg 35445294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 464809 - 464884
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatca-ctttttaccattttccaatgctatctttctatttt 91  Q
    |||||| |||||||||||||||||||||||||| ||||||  ||||||||||||| ||||| ||| ||||||||||    
T  464809 tttcaataacattttaacttttaaaaagttaaaattatcatttttttaccatttttcaatgttatatttctatttt 464884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 23685747 - 23685689
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||| |||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  23685747 tttcaataacattttgacttttaaaaagttaaatttatcacttttccccattttccaat 23685689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 15004940 - 15004985
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttt 61  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  15004940 gtttcaacaacattttaatttttaaaaagttaaatttatcactttt 15004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 34220740 - 34220639
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaaggg 116  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||| |||| || ||||||| |  |||||| |||||||| |||| ||||||||  |||||    
T  34220740 ttcaacaatattttaacttttaaaaacttaaattcatcacttttcaccacttcccaatgcaagatttctatttttatcctcttaaccaatgtcttaaggg 34220641  T
Q  117 ca 118  Q
    ||    
T  34220640 ca 34220639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 747585 - 747528
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    ||||||||  ||||||||||||||||||||||| |||||||||| || ||||||||||    
T  747585 ttcaacaattttttaacttttaaaaagttaaatctatcacttttcactattttccaat 747528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 17118468 - 17118376
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgt 108  Q
    ||||||||||||||| |  |||||||||||||||||||||| |||| | ||||||||| |  ||| |||||| ||||||||| |||||||||||    
T  17118468 gtttcaacaacatttgag-ttttaaaaagttaaatttatcatttttcaacattttccagtattatatttctatttttatccctttatccaatgt 17118376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 3454791 - 3454743
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 67  Q
    |||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  3454791 ttcaacaatatttta-cttttaaaaagttaaagttatcactttttaccat 3454743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 10900344 - 10900271
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||| || ||||||||||||||||| | ||||| ||||||||||| |||||| |||||  || ||||||||||    
T  10900344 ttcaataatattttaacttttaaaaaataaaattcatcactttttatcatttttcaatgtgatatttctatttt 10900271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 34334255 - 34334182
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||| ||||||| || ||||||||| ||||| ||| |||||||||||||| ||| | || ||||||||||    
T  34334255 ttcaacaatattttaatttgtaaaaagtttaatttgtcattttttaccattttcaaatacaatatttctatttt 34334182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 43140419 - 43140314
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    ||||||| || ||||| | |||||||||||||||||||||| ||||   |||||| ||||| ||| ||| || |||||||| |||||||||| || ||||    
T  43140419 gtttcaataatatttttaattttaaaaagttaaatttatcatttttcgtcatttttcaatgttatatttttatttttatcctcttatccaatatctcaag 43140320  T
Q  115 ggcaat 120  Q
    | ||||    
T  43140319 gacaat 43140314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 11445364 - 11445313
Alignment:
Q  39 aaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 90  Q
    |||||||||||||||||| |||| |||||||| ||||| ||| |||||||||    
T  11445364 aaaaagttaaatttatcatttttcaccatttttcaatgttatatttctattt 11445313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 29260222 - 29260167
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 73  Q
    ||||||||  ||||||||||| |||||| |||| |||||||||| |||||||||||    
T  29260222 ttcaacaattttttaactttttaaaagtcaaatctatcacttttcaccattttcca 29260167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 34512671 - 34512714
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttttaccattttc 71  Q
    |||||||||||||||||| |||| |||||||||| |||||||||    
T  34512671 ttttaacttttaaaaagtcaaatctatcacttttcaccattttc 34512714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 8327004 - 8327038
Alignment:
Q  27 attttaacttttaaaaagttaaatttatcactttt 61  Q
    |||||||||||||||||||||||||| ||||||||    
T  8327004 attttaacttttaaaaagttaaatttttcactttt 8327038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 30831636 - 30831706
Alignment:
Q  21 aacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||| ||||| ||||||||||||||||||| |||| ||||||  |||||  ||||| || ||||||||||    
T  30831636 aacaatatttttacttttaaaaagttaaattcatcattttttataattttttaatgcaatatttctatttt 30831706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 2136451 - 2136524
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||| ||||| |||||| |||||| |||||   ||||||| | ||||||||||||| || ||||||||||    
T  2136451 ttcaacaatattttcacttttcaaaagtcaaattctccacttttcatcattttccaatgcaatatttctatttt 2136524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 11659277 - 11659334
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||||| ||||||| |||||||||||||||||  |||||||| || ||||| ||||    
T  11659277 ttcaacaatattttaatttttaaaaagttaaattcttcacttttcactatttttcaat 11659334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 37230253 - 37230306
Alignment:
Q  36 tttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatt 89  Q
    ||||||||||||| |||||||||||| |||||||| |||| | || ||||||||    
T  37230253 tttaaaaagttaagtttatcacttttcaccatttttcaatacaatatttctatt 37230306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 11445415 - 11445379
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaattt 52  Q
    |||||||||||||||| || |||||||||||||||||    
T  11445415 gtttcaacaacattttgacatttaaaaagttaaattt 11445379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 35653351 - 35653236
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||   ||||    
T  35653351 gtttcaacaacattttgattttcaaaaagttaaatttatcacttttcaccattttccaatgctatatttctatttttatccccttatccaatgcaccaag 35653252  T
Q  115 ggcaatgattggcatt 130  Q
    ||||||| || |||||    
T  35653251 ggcaatggttagcatt 35653236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 35945258 - 35945377
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaa 113  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| ||| |||||| |||||| ||||||||||||  | |||    
T  35945258 agtttcaacaacattttaacatttaaaaagttaaatttatcacttttcactattttccaatgttatatttctatttttattcccttatccaataccccaa 35945357  T
Q  114 gggcaatgattggcattctc 133  Q
    | ||||||||| ||||||||    
T  35945358 gagcaatgattagcattctc 35945377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 34546790 - 34546882
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaat 106  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||| |||||| |||||||||||||||||||    
T  34546790 agtttcaacaacattttaacttttaaaaaattaaatttatcacttttcaccatttttcaatgttatatttctatttttatccccttatccaat 34546882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 37243861 - 37243977
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatgtcacaaggg 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||  ||| ||| ||||||   || |||||||||| | ||||||    
T  37243861 tttcaacaacattttaatttttaaaaagttaaatttatcacttttcaccattttccaatattatatttttatttttatcctttatccaatgcctcaaggg 37243960  T
Q  117 caatgattggcattctc 133  Q
    |||||||| ||||||||    
T  37243961 caatgattagcattctc 37243977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 4422058 - 4421940
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaaggg 116  Q
    |||||||||||||| | || |||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||| ||||||||||| |  |||||    
T  4422058 ttcaacaacattttgatttgtaaaaagttaaatttatcacttttcaccattttccaatgctatatttctatttttatcctcttatccaatgccctaaggg 4421959  T
Q  117 caatgattggcattctcta 135  Q
    ||||| ||  |||||||||    
T  4421958 caatggttaacattctcta 4421940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 4962613 - 4962507
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatgtcacaag 114  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||| | |||||||||||| ||| ||||||||||    |||||||||||||| ||||    
T  4962613 agtttcaacaacattttgactttaaaaaagttaaatttatcacttttcatcattttccaatgttatatttctatttttattccttatccaatgtcccaag 4962514  T
Q  115 ggcaatg 121  Q
    |||||||    
T  4962513 ggcaatg 4962507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 43414160 - 43414042
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| | ||||||||||||||||| |||| |||| |||||||||||||||||| |||||| ||||||||||||||||  |||| ||||    
T  43414160 gtttcaacaacattttgatttttaaaaagttaaattgatcatttttcaccattttccaatgctatatttctatttttatccccttatcccttgtcccaag 43414061  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||  || ||||||||    
T  43414060 ggcaattcttagcattctc 43414042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 27823279 - 27823364
Alignment:
Q  23 caacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||| |||||| ||||||||||||||||||||    
T  27823279 caacattttaatttttaaaaagttaaatttatcacttttcaccattttccaatactatatttctatttttatccccttatccaatg 27823364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 25017387 - 25017283
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||| | ||||| ||||||||||||||||||||||||||||| || |||||||||| |||| |||||| |||||||||||||||||||| | ||||    
T  25017387 gtttcaacgatattttgacttttaaaaagttaaatttatcacttttcacaattttccaatactatatttctatttttatccccttatccaatgcctcaag 25017288  T
Q  115 ggcaa 119  Q
    |||||    
T  25017287 ggcaa 25017283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 28143220 - 28143100
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaa 113  Q
    ||||||||||||||||| | |||||||||||||||||||| | |||| ||||||| |||||| ||| |||||| ||||||| |||||| ||||||| |||    
T  28143220 agtttcaacaacattttgatttttaaaaagttaaatttattatttttcaccatttcccaatgttatatttctatttttatctccttattcaatgtcccaa 28143121  T
Q  114 gggcaatgattggcattctct 134  Q
    |||||||| || |||||||||    
T  28143120 gggcaatggttagcattctct 28143100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 5151501 - 5151594
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||| | |||||||||||| ||| |||||| ||||||||||||||| ||||    
T  5151501 agtttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcattttccaatgttatatttctatttttatccccttatcaaatg 5151594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 16315628 - 16315512
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| ||| |||||||||||  |||||||||||| |||||||||||||||||| |||||| |||||||||||||||| ||| |  |||    
T  16315628 gtttcaacaacattttgactattaaaaagtta--tttatcacttttcaccattttccaatgctatatttctatttttatccccttatccgatgcccaaag 16315531  T
Q  115 ggcaatgattggcattctc 133  Q
    |||| || || ||||||||    
T  16315530 ggcagtggttagcattctc 16315512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 8410163 - 8410281
Alignment:
Q  24 aacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatga 122  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||| ||| |||| ||| || ||||||||||||||| |||  | ||| |||||||     
T  8410163 aacattttgacttttaaaaagttaaatttatcattttttaccattttctaatactatatttttatttttatccccttatctaataccccaaaggcaatgg 8410262  T
Q  123 ttggcattctctatctttt 141  Q
    || ||||||||||| ||||    
T  8410263 ttagcattctctatttttt 8410281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 1479232 - 1479140
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||| |  ||||| ||||||||| |||||| |||||||||||||| |||||    
T  1479232 gtttcaataacattttgacttttaaaaagttaaatttatcacttttcattatttttcaatgctatatttctatttttatccccttattcaatg 1479140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 1759830 - 1759922
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||  ||||||| |||| |||| |||||| |||||||| |||||||||||    
T  1759830 gttttaacaacattttgacttttaaaaagttaaatttatcacttttctccatttttcaatactatatttctatttttatcctcttatccaatg 1759922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 12068267 - 12068195
Alignment:
Q  19 tcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  12068267 tcaataacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatactatatttctatttt 12068195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 39567916 - 39568035
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    ||||||||||  |||| | |||||||||||||||||||||| |||| | |||||||||||||||| ||| || ||||||||| |||||||||| | ||||    
T  39567916 gtttcaacaatgttttgatttttaaaaagttaaatttatcatttttcatcattttccaatgctatatttatatttttatcccattatccaatgccccaag 39568015  T
Q  115 ggcaatgattggcattctct 134  Q
    ||||||| ||  ||||||||    
T  39568016 ggcaatggttatcattctct 39568035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 13951332 - 13951258
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 90  Q
    |||||||||||||||| |||||||||||  |||||||||||||||| |||||||| ||||||||| |||||||||    
T  13951332 gtttcaacaacattttgacttttaaaaaaataaatttatcacttttcaccatttttcaatgctatatttctattt 13951258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 15915871 - 15915960
Alignment:
Q  42 aagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcatt 130  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| |||||| ||||||||||||| | |||| |||||| || |||||    
T  15915871 aagttaaatttatcacttttcaccattttccaatgctatatttctatttttattcccttatccaatgccccaagtgcaatggttagcatt 15915960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 3639170 - 3639072
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| |||| | |||||||||| |||||||||||||| || |||||||||||||| ||| |||||| |||||||||||||| ||||||| ||||    
T  3639170 gtttcaacaatatttga-cttttaaaaaattaaatttatcactcttcaccattttccaatgttatatttctatttttatccccttattcaatgtctcaag 3639072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 40099352 - 40099450
Alignment:
Q  23 caacattttaacttttaaaaagttaaatttatcactttttacca-ttttccaatgctatctttctattttatccccttatccaatgtcacaagggcaatg 121  Q
    |||||||| || |||||||| |||||||||||||||||| |||| |||| ||||||||| ||| |||||| ||||||||||||||| ||||||| |||||    
T  40099352 caacatttcaatttttaaaaggttaaatttatcacttttcaccattttttcaatgctatatttttatttt-tccccttatccaatgccacaaggacaatg 40099450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 338860 - 338754
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| | ||||||||||||||||||||||||||||| |||||| ||||   || ||| || ||||||||| |||||||||| | ||||    
T  338860 gtttcaacaatattttgatttttaaaaagttaaatttatcactttttatcatttttcaatatcatatttttatttttatccctttatccaatgccccaag 338761  T
Q  115 ggcaatg 121  Q
    |||||||    
T  338760 ggcaatg 338754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 12914188 - 12914261
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatt 89  Q
    |||||||||| ||||| | ||||||||| ||||||||||||||||| |||||||| ||||||||| ||||||||    
T  12914188 gtttcaacaatattttgatttttaaaaaattaaatttatcacttttcaccatttttcaatgctatatttctatt 12914261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 39693024 - 39693087
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 80  Q
    ||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||| |||||||||    
T  39693024 tttcaacaatattttaacttttaaaaagataaatttatcattttttaccacttttcaatgctat 39693087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 25568388 - 25568304
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatcccctt 99  Q
    ||||||| |||||||| | |||||||||||||||| |||||||||| | |||||| ||||||||| ||| || ||||||||||||    
T  25568388 gtttcaataacattttgatttttaaaaagttaaatgtatcacttttcatcatttttcaatgctatatttatatttttatcccctt 25568304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 39335488 - 39335540
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 70  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| |||||    
T  39335488 ttcaacaacattttgacttttaaaaagttaaattcatcactttttactatttt 39335540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 38610386 - 38610313
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||  |||| |||||||||||||||||||  |||||||||| |||||| |||||| || ||||||||||    
T  38610386 ttcaacaatgttttgacttttaaaaagttaaattcttcactttttatcatttttcaatgcaatgtttctatttt 38610313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 10017715 - 10017599
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||| ||||||||||||||||||||||||||  |||||||| |||| |||| |||||| | |||| |||||| |||||||| |||||| |||||| | ||    
T  10017715 gttttaacaacattttaacttttaaaaagtt--atttatcaattttcacca-tttccagtactatatttctatttttatcctcttatcaaatgtctctag 10017619  T
Q  115 ggcaatgattggcattctct 134  Q
    | ||||| ||  ||||||||    
T  10017618 gacaatggttaacattctct 10017599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 19894836 - 19894906
Alignment:
Q  21 aacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||| ||||||||||||||||||||||||| ||||  ||| ||||||||  ||||| || ||||||||||    
T  19894836 aacaatattttaacttttaaaaagttaaattcatcatatttaaccattttttaatgcaatatttctatttt 19894906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 678465 - 678522
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    ||||||||  ||||||||||||||| |||||||| || |||||| |||||||||||||    
T  678465 ttcaacaattttttaacttttaaaaggttaaattcattacttttcaccattttccaat 678522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 20184642 - 20184570
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 90  Q
    ||||||||  |||||||||||||||||| ||||| ||||||||| ||| |||  |||||| || |||||||||    
T  20184642 ttcaacaatgttttaacttttaaaaagtgaaattcatcacttttcaccgtttctcaatgcaatatttctattt 20184570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 12349628 - 12349585
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttttaccattttc 71  Q
    |||||||||||||||||| |||| |||||||||| |||||||||    
T  12349628 ttttaacttttaaaaagtcaaatctatcacttttcaccattttc 12349585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 24288502 - 24288553
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 69  Q
    ||||||||  || |||||||||||||||||||| |||||||||| |||||||    
T  24288502 ttcaacaattttgtaacttttaaaaagttaaatctatcacttttcaccattt 24288553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 24373719 - 24373668
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 69  Q
    ||||||||  || |||||||||||||||||||| |||||||||| |||||||    
T  24373719 ttcaacaattttgtaacttttaaaaagttaaatctatcacttttcaccattt 24373668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 28599738 - 28599691
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||||||||||||||| |||||||||| |||| || ||||||||||    
T  28599738 ttttaacttttaaaaagtcaaatttatcatttttcactattttccaat 28599691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 3015144 - 3015106
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatca 56  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  3015144 ttcaacaatattttaacttttaaaaagttaaattaatca 3015106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 6823847 - 6823773
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagtt-aaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||| |||||||||||||||||||| |||||||| |||||  ||| |||||| || | || ||||||||||    
T  6823847 ttcaacaatattttaacttttaaaaagttaaaatttattactttccaccgttttccgatacaatatttctatttt 6823773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 3242047 - 3241974
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||| |||||||||||||||||||| |||| |||| |||| || | || ||||||| || ||| ||||||    
T  3242047 ttcaacaatattttaacttttaaaaagtttaattcatcaattttcactacttcccaatgcaatatttttatttt 3241974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 27535114 - 27535167
Alignment:
Q  23 caacattttaacttttaaaaagtt-aaatttatcactttttaccattttccaat 75  Q
    ||||||||||||||||||||| || ||||| ||||||||| |||||||| ||||    
T  27535114 caacattttaacttttaaaaacttaaaattcatcacttttcaccatttttcaat 27535167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 5058772 - 5058812
Alignment:
Q  30 ttaacttttaaaaagttaaatttatcactttttaccatttt 70  Q
    |||| ||||||||||||||||||||||||||| || |||||    
T  5058772 ttaatttttaaaaagttaaatttatcacttttcacaatttt 5058812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 17168691 - 17168763
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 90  Q
    |||| ||| ||||||| ||||||||||| ||||| |||| |||| ||| |||| |||||| || |||||||||    
T  17168691 ttcagcaatattttaaattttaaaaagtcaaattcatcatttttcaccgtttttcaatgcaatatttctattt 17168763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 28996229 - 28996285
Alignment:
Q  19 tcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||||  ||||||||||||||||||| |||| |  |||||| |||||||||||||    
T  28996229 tcaacaattttttaacttttaaaaagttgaattcacaacttttcaccattttccaat 28996285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 39042128 - 39042096
Alignment:
Q  19 tcaacaacattttaacttttaaaaagttaaatt 51  Q
    ||||||||||||||||||||||||| |||||||    
T  39042128 tcaacaacattttaacttttaaaaaattaaatt 39042096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 39167628 - 39167683
Alignment:
Q  35 ttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||||||||||||| | |||||| ||||||||||||| | || ||||||||||    
T  39167628 ttttaaaaagttaaattttt-acttttcaccattttccaatacaatgtttctatttt 39167683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 19389405 - 19389288
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagg 115  Q
    ||||||| | ||||| ||||||||||||||||||||||||||||| || |||||||||| |||| |||||| |||||||||||||||||||| | |||||    
T  19389405 tttcaacgatattttgacttttaaaaagttaaatttatcacttttcacaattttccaatactatatttctatttttatccccttatccaatgccccaagg 19389306  T
Q  116 gcaatgattggcattctc 133  Q
    |||||| || ||||||||    
T  19389305 gcaatggttagcattctc 19389288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 18068974 - 18069062
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatc 102  Q
    ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||    
T  18068974 agtttcaacaacattttgacctttaaaaagttaaatttatcacttttcaccattttccaatgctatatttctatttttatccccttatc 18069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 4989953 - 4990064
Alignment:
Q  23 caacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 121  Q
    ||||||||| || ||||||||||||||||||||| |||| || ||||||||||||||| |||||| ||||||||||||||||||||  |||||| |||||    
T  4989953 caacattttgacatttaaaaagttaaatttatcatttttcactattttccaatgctatatttctatttttatccccttatccaatgctacaaggacaatg 4990052  T
Q  122 attggcattctc 133  Q
    ||| ||||||||    
T  4990053 attagcattctc 4990064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 26195469 - 26195383
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| |||||| ||||||||||||||    
T  26195469 gtttcaacaacattttaacttttaaaaagttaaatttatcacttttcacaattttccaatgttatatttctatttttatccccttat 26195383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 21016151 - 21016035
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaaggg 116  Q
    |||||||||||||| |||||||||||||||||| |||||||||| |||||||| ||||| ||| |||||| |||||||||||||||||| | | ||| ||    
T  21016151 ttcaacaacattttgacttttaaaaagttaaatctatcacttttaaccatttttcaatgttatatttctatttttatccccttatccaaagcctcaaagg 21016052  T
Q  117 caatgattggcattctc 133  Q
    ||||| || ||||||||    
T  21016051 caatggttagcattctc 21016035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 25249437 - 25249345
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||| || ||||| ||||||||||||||    
T  25249437 gtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttttatttttacccccttatccaatg 25249345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 10694821 - 10694911
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt-atccccttatccaat 106  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||| |||| ||| |||||| |||||||||||||||    
T  10694821 tttcaacaacattttgacttttaaaaagttaaatttatcactttttaccatttttaaatactatatttttattttaatccccttatccaat 10694911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 8018773 - 8018866
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||||| |||||||||||||  ||| |||||| ||||||||||||||||||||    
T  8018773 agttttaacaacattttgatttttaaaaagttaaatttatcacttttcaccattttccaatattatatttctatttttatccccttatccaatg 8018866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 26672803 - 26672894
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaat 106  Q
    |||||||||||||||| ||||||||||| |||||||||||  |||||| |||||||||||||||| |||||| ||||||||| |||||||||    
T  26672803 gtttcaacaacattttgacttttaaaaaattaaatttatccttttttatcattttccaatgctatatttctatttttatccctttatccaat 26672894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 21016249 - 21016362
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaaggg 116  Q
    |||||||||||||| |||||||||||||||||| |||||||||| |||||||| ||||  ||| |||||| |||||||||||||||||| | | ||| ||    
T  21016249 ttcaacaacattttgacttttaaaaagttaaatctatcacttttcaccatttttcaatattatatttctatttttatccccttatccaaagccccaaagg 21016348  T
Q  117 caatgattggcatt 130  Q
    ||||| || |||||    
T  21016349 caatggttagcatt 21016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 45338020 - 45338137
Alignment:
Q  19 tcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggc 117  Q
    |||| |||||||| | |||||||||||||||||||||| |||| |||||||| ||||| ||| |||||| |||||||||||||||||||| |  |||| |    
T  45338020 tcaataacattttgatttttaaaaagttaaatttatcatttttcaccatttttcaatgttatatttctatttttatccccttatccaatgcccaaaggac 45338119  T
Q  118 aatgattggcattctcta 135  Q
    |||| || ||||||||||    
T  45338120 aatggttagcattctcta 45338137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 6433557 - 6433632
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  6433557 gttttaacaatattttaacttttaaaaagttaaatttataactttttaccatttttcaatgctatatttttatttt 6433632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 6939171 - 6939246
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||||||||||| ||||||||||||||||||||||||||| | |||||||| ||||| ||| ||||||||||    
T  6939171 gtttcaacaacattttgacttttaaaaagttaaatttatcacttgtcaccatttttcaatgttatatttctatttt 6939246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 133
Target Start/End: Complemental strand, 5129545 - 5129434
Alignment:
Q  23 caacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 121  Q
    ||||||||| ||||||||||| ||||||||||||||||| | |||||| ||||||||| |||| | ||||||||||||||| ||||    ||||||||||    
T  5129545 caacattttgacttttaaaaaattaaatttatcacttttcatcatttttcaatgctatatttcaatttttatccccttatcaaatgctctaagggcaatg 5129446  T
Q  122 attggcattctc 133  Q
     || ||||||||    
T  5129445 gttagcattctc 5129434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 37433279 - 37433369
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaat 106  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| | |||||| ||||| ||| | || | |||||||||||||||||||    
T  37433279 gtttcaacaacattttaacttt-aaaaagttaaatttatcacttttcatcatttttcaatgttatatgtcgatttttatccccttatccaat 37433369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 26892798 - 26892874
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||| || |||||||||||||||||||||||||||||| ||||||| ||||| ||||  ||| ||||||||||    
T  26892798 agtttcaataatattttaacttttaaaaagttaaatttatcattttttacaatttttcaatattatatttctatttt 26892874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 44874354 - 44874430
Alignment:
Q  32 aacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||| ||| ||| || ||||||||||||||||||||    
T  44874354 aacttttaaaaatttaaatttatcacttttcaccatttttcaatgttatatttatatttttatccccttatccaatg 44874430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 14855481 - 14855394
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttat 101  Q
    ||||| |||||||||||||||||||||| |||||||||||| ||||| || |||||  ||| |||| |||||| ||||||||||||||    
T  14855481 agttttaacaacattttaacttttaaaatgttaaatttatctcttttcactattttttaatactatatttctatttttatccccttat 14855394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 7532812 - 7532890
Alignment:
Q  30 ttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    ||||||||||||||  |||||| ||||||||| ||||||||||||| | || |||||| ||||||||||||| ||||||    
T  7532812 ttaacttttaaaaacctaaattcatcacttttcaccattttccaatacaatatttctatttttatccccttaaccaatg 7532890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 33741570 - 33741525
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttt 61  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||    
T  33741570 gtttcaacaatattttaacttttaaaaagttaaatttatcattttt 33741525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 34714017 - 34713953
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 80  Q
    |||||||||||||||| |||||||| |||| ||||||||||||||  |||||||| |||| ||||    
T  34714017 gtttcaacaacattttgacttttaagaagtgaaatttatcactttgcaccatttttcaatactat 34713953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 4308824 - 4308876
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 70  Q
    |||||||  ||||||||||||| ||||||||||| |||| |||||||||||||    
T  4308824 ttcaacactattttaacttttataaagttaaattcatcattttttaccatttt 4308876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 30351606 - 30351666
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcac-tttttaccattttccaatgc 77  Q
    |||||||| ||||||||||||||||||||||| |  |||| ||||||||||||| ||||||    
T  30351606 ttcaacaatattttaacttttaaaaagttaaactcgtcacttttttaccatttttcaatgc 30351666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 3174484 - 3174563
Alignment:
Q  27 attttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaa 105  Q
    ||||| ||||||||||||| |||||||| | |||| |||||||||||||   || |||||| ||||||||||| ||||||    
T  3174484 attttgacttttaaaaagtcaaatttataatttttcaccattttccaatataatatttctatttttatcccctcatccaa 3174563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 20169309 - 20169372
Alignment:
Q  27 attttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 90  Q
    ||||||||||||||||||| ||||| || | ||||||| |||||| ||||| || |||||||||    
T  20169309 attttaacttttaaaaagtcaaattcataattttttacaattttctaatgcaatatttctattt 20169372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 39972236 - 39972189
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||||||||||||||| ||||| ||||||||| ||||||| |||||    
T  39972236 ttttaacttttaaaaagtcaaattcatcacttttcaccatttcccaat 39972189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 20212483 - 20212433
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatt 68  Q
    |||||| | ||||||||||||||||| ||||||| ||||||||| ||||||    
T  20212483 ttcaacgatattttaacttttaaaaacttaaattcatcacttttcaccatt 20212433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 17320045 - 17320000
Alignment:
Q  21 aacaacattttaacttttaaaaagttaaatttatcactttttacca 66  Q
    ||||| ||||||||||||||||||||||||| ||| ||||| ||||    
T  17320045 aacaatattttaacttttaaaaagttaaattcatctcttttcacca 17320000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 38870019 - 38870092
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||| ||| ||||| |||||||||| ||| ||||  |||||||| | ||||||||||||| || ||||||||||    
T  38870019 ttcatcaatattttgacttttaaaatgttgaattcttcacttttcatcattttccaatgcaatgtttctatttt 38870092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 39491891 - 39491858
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttt 61  Q
    |||||||||||||||||||||||| |||||||||    
T  39491891 ttttaacttttaaaaagttaaattcatcactttt 39491858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 6396367 - 6396315
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 70  Q
    ||||||||||||||||| ||||||| |||||||| || ||| || ||||||||    
T  6396367 ttcaacaacattttaacgtttaaaatgttaaattcattactcttcaccatttt 6396315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 6866929 - 6867020
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| ||||||||| |||||||| ||| || ||||||||||||||||||||    
T  6866929 tttcaacaacattttgacttttaaaaggttaaatttatcacttttcaccattttcaaatgctatatttttatttttatccccttatccaatg 6867020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 12191507 - 12191598
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 107  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||| |||||| |||||||| |||||||||||    
T  12191507 tttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccatttaccaatgctatatttctatttttatccacttatccaatg 12191598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 10855445 - 10855562
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | |||||| ||||  ||| |||||| ||||||||||||||| |||| | ||||    
T  10855445 gtttcaacaacattttgacttttaaaaagttaaatttatcacttttcatcatttttcaatattatatttctatttttatccccttatcaaatgccccaag 10855544  T
Q  115 ggcaatgattggcattct 132  Q
    | ||||| || |||||||    
T  10855545 gacaatggttagcattct 10855562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 29692427 - 29692319
Alignment:
Q  26 cattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgatt 124  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||| |||| |||| |||||| ||||||||  |||||||||| | ||||||||||||||    
T  29692427 cattttgactcttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatccatttatccaatgccccaagggcaatgatt 29692328  T
Q  125 ggcattctc 133  Q
     ||||||||    
T  29692327 agcattctc 29692319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 7875277 - 7875202
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||    
T  7875277 gtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcattttccaatgctatatttctatttt 7875202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 7274309 - 7274191
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctat-tttatccccttatccaatgtcacaagg 115  Q
    |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||| ||| ||||||| ||||| ||||| ||||||||| ||| |    
T  7274309 tttcaacaacattttaacttttaaaatgttaaatttatcacttttcgtcattttccaatgttatatttctatatttattcccttgtccaatgtcccaaag 7274210  T
Q  116 gcaatgattggcattctct 134  Q
     ||||| ||  ||||||||    
T  7274209 acaatggttaacattctct 7274191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 7880524 - 7880448
Alignment:
Q  15 agtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||| |||||||| ||||||||||    
T  7880524 agtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcattttctaatgctatatttctatttt 7880448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 5578287 - 5578392
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| |||||||||||||||||||||||| || | |  ||||| ||||||||| |||||| ||||||||||| |||||||| | ||||    
T  5578287 gtttcaacaatattttgacttttaaaaagttaaatttatcaattctcattatttttcaatgctatatttctatttttatcccctcatccaatgcctcaag 5578386  T
Q  115 ggcaat 120  Q
    ||||||    
T  5578387 ggcaat 5578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 8324200 - 8324125
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| || ||||  ||||||||| ||||||||||    
T  8324200 gtttcaacaacattttaatttttaaaaagttaaatttatcatttttcacaatttctcaatgctatgtttctatttt 8324125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 26572173 - 26572060
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||| ||||| ||||||||||||||||  ||||||||||||||||||| |||||||     |||| |||||| |||||||||||||||||||| | ||||    
T  26572173 gttttaacaatattttaacttttaaaatattaaatttatcactttttatcattttc-----ctatatttctatttttatccccttatccaatgccccaag 26572079  T
Q  115 ggcaatgattggcattctc 133  Q
    | ||||| || ||||||||    
T  26572078 gacaatggttagcattctc 26572060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 31220421 - 31220369
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 70  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  31220421 ttcaataacattttaacttttaaaaagttaaattcatcactttttaccatttt 31220369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 21186111 - 21186059
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 70  Q
    ||||| || ||||||||||||||||||||||||| ||||||||||||||||||    
T  21186111 ttcaataatattttaacttttaaaaagttaaattcatcactttttaccatttt 21186059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 12175584 - 12175647
Alignment:
Q  28 ttttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    ||||||||||||||||||||||||||||| |||||| |||||| |||| |||| ||| ||||||    
T  12175584 ttttaacttttaaaaagttaaatttatcagtttttatcatttttcaatactatatttatatttt 12175647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 133
Target Start/End: Original strand, 32786259 - 32786346
Alignment:
Q  46 taaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatgtcacaagggcaatgattggcattctc 133  Q
    |||||||||| ||||| |||||||||||||| ||| ||||||||||   ||||||||||||  | ||||||||||| || ||||||||    
T  32786259 taaatttatctcttttcaccattttccaatgttatatttctatttttatcccttatccaataccccaagggcaatggttagcattctc 32786346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 16437678 - 16437567
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| ||||||||||||||||||||        | |||||||||||||| ||| |||||| |||||||| ||||||||||| |  |||    
T  16437678 gtttcaacaatatttttacttttaaaaagttaaattt--------tcaccattttccaatgttatatttctatttttatccacttatccaatgccttaag 16437587  T
Q  115 ggcaatgattggcattctct 134  Q
     |||||| || |||||||||    
T  16437586 agcaatggttagcattctct 16437567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 1947424 - 1947476
Alignment:
Q  22 acaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 74  Q
    ||||| |||| ||||||| |||||| |||||| ||||||||||||||||||||    
T  1947424 acaactttttgacttttagaaagttgaatttaacactttttaccattttccaa 1947476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 28014650 - 28014740
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttct-attttatccccttatccaatg 107  Q
    |||||||| ||||||||||||||||||| ||| | |||| |||| ||||||| ||||| | || ||||| |||||| || |||| ||||||    
T  28014650 ttcaacaatattttaacttttaaaaagtcaaactcatcatttttcaccatttcccaatacaatatttctaattttaccctcttaaccaatg 28014740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 5029546 - 5029489
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
    |||||||  ||||||||||||||||||||||||| |  || |||||||||||| ||||    
T  5029546 ttcaacactattttaacttttaaaaagttaaattcacaacattttaccatttttcaat 5029489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 27127601 - 27127528
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 91  Q
    |||||||| || || ||||||||||||||||||| |||| |||| |||||||  |||| | || ||||||||||    
T  27127601 ttcaacaatatcttgacttttaaaaagttaaattcatcatttttcaccatttctcaatacaatatttctatttt 27127528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 34780072 - 34780023
Alignment:
Q  18 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 67  Q
    ||||||||  ||||||||||||||||||||||||  |||||||| |||||    
T  34780072 ttcaacaatgttttaacttttaaaaagttaaattcttcacttttcaccat 34780023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 392233 - 392164
Alignment:
Q  11 catcagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 80  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  392233 catcggtttcaacaacattttgacttttaaaaagttaaatttatcactttttaccatttttcaatgctat 392164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 16867 - 16750
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| ||||||||||||||| |||||||| |||| || ||||| ||||||||| |||||| |||||||||||||||||||| |  | |    
T  16867 gtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caatgctatatttctatttttatccccttatccaatgccctatg 16769  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  16768 ggcaatggttagcattctc 16750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 27035 - 26918
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| ||||||||||||||| |||||||| |||| || ||||| ||||||||| |||||| |||||||||||||||||||| |  | |    
T  27035 gtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caatgctatatttctatttttatccccttatccaatgccctatg 26937  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  26936 ggcaatggttagcattctc 26918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 37201 - 37084
Alignment:
Q  16 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 114  Q
    |||||||||| ||||| ||||||||||||||| |||||||| |||| || ||||| ||||||||| |||||| |||||||||||||||||||| |  | |    
T  37201 gtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caatgctatatttctatttttatccccttatccaatgccctatg 37103  T
Q  115 ggcaatgattggcattctc 133  Q
    ||||||| || ||||||||    
T  37102 ggcaatggttagcattctc 37084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 4337 - 4249
Alignment:
Q  45 ttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattct 132  Q
    ||||||||||||||||| || ||||||||||||||| ||| || |||||||||  ||||||||||| |||  ||||||||| |||||||    
T  4337 ttaaatttatcacttttcacaattttccaatgctatatttttatttttatccctctatccaatgtcccaaaagcaatgattagcattct 4249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 4741 - 4705
Alignment:
Q  17 tttcaacaacattttaacttttaaaaagttaaattta 53  Q
    |||||||||||| || |||||||||||||||||||||    
T  4741 tttcaacaacatattgacttttaaaaagttaaattta 4705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2122 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold2122
Description:

Target: scaffold2122; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 711 - 655
Alignment:
Q  19 tcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 75  Q
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T  711 tcaacaattttttaacttttaaaaagttgaattcacaacttttcaccattttccaat 655  T

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