View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14931_low_9 (Length: 206)
Name: NF14931_low_9
Description: NF14931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14931_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 138; Significance: 2e-72; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 24257520 - 24257687
Alignment:
| Q |
18 |
tcgtcctcctcctcttccgtcatagaatttgagttggacatgtctcccatggatccatctt---cttcttcttcatcatcttgctctacaaccttgttat |
114 |
Q |
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| T |
24257520 |
tcgtcctcctcctcctccgtcgtagaatttgagttggacatgtctcccatggatccatcttcttcttcttcttcatcatcttgctctacaaccttgttat |
24257619 |
T |
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| Q |
115 |
ctagatttgaagcaacgggtgtgatttcgtcgttggtgagtgaatcaatgaagttgtggaaatcatct |
182 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
24257620 |
ctagatttggagcaacgggtgtgatttcgtcgttggtgagtgaatcaatgaagttgtgaaaatcatct |
24257687 |
T |
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