View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14932_low_8 (Length: 354)
Name: NF14932_low_8
Description: NF14932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14932_low_8 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 43767293 - 43767631
Alignment:
| Q |
16 |
caaacatgacaagcaaaagaaaatgatggtacattgtaattttaaatgatatttcctatatttgaaaatttaattctaatgttgtaaatgttttagtgga |
115 |
Q |
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| T |
43767293 |
caaacatgacaagcaaaagaaaatgatggtacattgtaattttaaatgatatttcctatatttgaaaatttaattctaatgttgtaaatgttttagtgga |
43767392 |
T |
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| Q |
116 |
cnnnnnnnngattaagttgattgtagtagaattatatgtttttgattatagtatggtttcttaacacatgcattaatctttctttttagaagtgaaggtt |
215 |
Q |
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| T |
43767393 |
caaaaaaaagattaagttgattgtagtagaattatatgtttttgattatagtatggtttcttaacacatgcattaatctttctttttagaagtgaaggtt |
43767492 |
T |
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| Q |
216 |
gttgtcaacttttaagctcctttgcttatctatttcacagaaatatagataaagacacataaaatataaaaagttcaatgtcatttaaactttagtaaca |
315 |
Q |
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| T |
43767493 |
gttgtcaacttttaagctcctttgcttatctatttcacataaatatagataaagacacataaaatataaaaagttcaatgtcatttaaactttagtaaca |
43767592 |
T |
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| Q |
316 |
cttggaactttcctctcctccatgtcttgtctaattcat |
354 |
Q |
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| T |
43767593 |
cttggaactttcctctcctccatgtcttgtctaattcat |
43767631 |
T |
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