View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14933_high_5 (Length: 349)

Name: NF14933_high_5
Description: NF14933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14933_high_5
NF14933_high_5
[»] chr4 (15 HSPs)
chr4 (18-194)||(26545777-26545954)
chr4 (221-333)||(26546033-26546145)
chr4 (216-279)||(1961628-1961691)
chr4 (216-282)||(36989851-36989917)
chr4 (216-282)||(45249967-45250033)
chr4 (216-282)||(50297714-50297780)
chr4 (216-282)||(24940649-24940714)
chr4 (239-282)||(27918413-27918456)
chr4 (219-282)||(54719699-54719762)
chr4 (219-282)||(54997780-54997843)
chr4 (221-282)||(36937492-36937553)
chr4 (222-282)||(1008973-1009033)
chr4 (216-276)||(28675768-28675828)
chr4 (238-282)||(42051189-42051233)
chr4 (217-277)||(53850146-53850206)
[»] chr2 (12 HSPs)
chr2 (216-279)||(32294590-32294653)
chr2 (216-280)||(39420272-39420336)
chr2 (221-282)||(25626326-25626387)
chr2 (221-282)||(44068859-44068920)
chr2 (227-282)||(41890063-41890118)
chr2 (216-282)||(14275773-14275839)
chr2 (216-282)||(20061132-20061198)
chr2 (236-282)||(34141641-34141687)
chr2 (216-282)||(37775684-37775749)
chr2 (216-277)||(9950287-9950348)
chr2 (237-282)||(36285004-36285049)
chr2 (242-282)||(15079872-15079912)
[»] chr1 (10 HSPs)
chr1 (216-282)||(11018019-11018085)
chr1 (241-282)||(42066667-42066708)
chr1 (238-282)||(31635481-31635525)
chr1 (219-282)||(4658693-4658756)
chr1 (216-282)||(1035586-1035652)
chr1 (224-282)||(5799816-5799874)
chr1 (238-282)||(11420853-11420897)
chr1 (216-273)||(8644779-8644836)
chr1 (222-282)||(15281391-15281451)
chr1 (218-282)||(36012493-36012557)
[»] chr7 (5 HSPs)
chr7 (216-282)||(28337222-28337288)
chr7 (216-282)||(32786808-32786874)
chr7 (216-282)||(45837826-45837892)
chr7 (217-282)||(2033629-2033694)
chr7 (238-282)||(39837478-39837522)
[»] chr5 (5 HSPs)
chr5 (216-282)||(41144658-41144724)
chr5 (216-277)||(967581-967642)
chr5 (238-282)||(16627336-16627380)
chr5 (220-282)||(554365-554427)
chr5 (220-282)||(10523677-10523739)
[»] chr3 (6 HSPs)
chr3 (216-282)||(48192644-48192710)
chr3 (219-282)||(4539877-4539940)
chr3 (220-282)||(55158506-55158566)
chr3 (216-282)||(18030006-18030072)
chr3 (216-282)||(47006614-47006680)
chr3 (216-277)||(47069299-47069360)
[»] scaffold0482 (1 HSPs)
scaffold0482 (238-282)||(586-630)
[»] chr8 (11 HSPs)
chr8 (238-282)||(7774636-7774680)
chr8 (238-282)||(7791283-7791327)
chr8 (238-282)||(7811867-7811911)
chr8 (216-282)||(5493363-5493429)
chr8 (216-282)||(6530324-6530390)
chr8 (216-282)||(31313325-31313391)
chr8 (245-282)||(40505331-40505368)
chr8 (238-282)||(45244719-45244763)
chr8 (220-274)||(8114389-8114443)
chr8 (216-282)||(34576706-34576772)
chr8 (238-282)||(21574311-21574355)
[»] chr6 (4 HSPs)
chr6 (238-282)||(6469627-6469671)
chr6 (216-282)||(10960546-10960612)
chr6 (238-282)||(8504508-8504552)
chr6 (238-282)||(29286009-29286053)
[»] scaffold0542 (1 HSPs)
scaffold0542 (216-282)||(4533-4599)
[»] scaffold0116 (1 HSPs)
scaffold0116 (221-282)||(3039-3100)


Alignment Details
Target: chr4 (Bit Score: 101; Significance: 5e-50; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 26545777 - 26545954
Alignment:
Q  18 ctaacgacataagattgtttaaaacccttttacaaaatgtgtgaaaataacttatgaacacttcagtaaattgttttcaac-nnnnnnnnataagctctn 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||         |||||| ||     
T  26545777 ctaacgacataagattgtttaaaacccttttacaaattgtgtgaaaataacttatgaacacttcagtaaattgttttcgactttttttttataagcactg 26545876  T
Q  117 nnnnnntgatattagaatagtgtgattttattttgctttttattatagaagctgctatattaatagacattgaaaaat 194  Q
          | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  26545877 aaaaaattatattagaatagtgtgattttattttgctttttattatagaagctactatattaatagacactgaaaaat 26545954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 221 - 333
Target Start/End: Original strand, 26546033 - 26546145
Alignment:
Q  221 cacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaagttgcttaacatgtgccttaaggacacaagaagttagc 320  Q
    |||||||||| | |||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||| |   |||||||||||||||||||||    
T  26546033 cacatgttaaaaaagttattataaaaatatacatattaaaagtcgtgcatttaacttcttaacttgcttaacatatattttaaggacacaagaagttagc 26546132  T
Q  321 atgacccttatga 333  Q
    |||||||||||||    
T  26546133 atgacccttatga 26546145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 1961628 - 1961691
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttct 279  Q
    ||||||||||||||| | | |||||||||||||||| |||| ||||||||||||||||||||||    
T  1961628 aagggcacatgttaaaaaacttattatagaaatataaatatcaaaagtcgtgcattcaacttct 1961691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 36989851 - 36989917
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||| |||||| | | |||||| ||||||| ||||||||||||||||||||||||||||||    
T  36989851 aagggcacatattaagaaactcattataaaaatatacatattaaaagtcgtgcattcaacttcttaa 36989917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 45250033 - 45249967
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||| ||||| | || ||||||||||||  |||| |||||||||||||||||||||||||    
T  45250033 aagggcacatgctaagaaattttttatagaaatattcatatcaaaagtcgtgcattcaacttcttaa 45249967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 50297780 - 50297714
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||| | | |||||||||||| | |||| ||||| |||||||||||||||||||    
T  50297780 aagggcacatgttaagatactcattatagaaatacacatatcaaaaggcgtgcattcaacttcttaa 50297714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 24940649 - 24940714
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||| | | |||||| ||||||||| | || |||||||||||||||||||||||||    
T  24940649 aagggcacatgttaaaa-acttattaaagaaatataaacataaaaagtcgtgcattcaacttcttaa 24940714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 27918456 - 27918413
Alignment:
Q  239 ttatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||||||| ||| |||||||||||||| ||||||||||    
T  27918456 ttatagaaatatatgtatcaaaagtcgtgcattaaacttcttaa 27918413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 54719762 - 54719699
Alignment:
Q  219 ggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||||||  | ||||||||||||||||  |||||||||||||  | ||||||||||||    
T  54719762 ggcacatgttaaggaatttattatagaaatatacttattaaaagtcgtatagtcaacttcttaa 54719699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 54997843 - 54997780
Alignment:
Q  219 ggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||||||| | | |||||||||||| | |||| ||||  |||||||||||||||||||    
T  54997843 ggcacatgttaagatactcattatagaaataaacatatcaaaatgcgtgcattcaacttcttaa 54997780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 36937553 - 36937492
Alignment:
Q  221 cacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||| | | | ||||||||||||||| ||| ||||  |||||||||||||||||||    
T  36937553 cacatgttaacaaactcattatagaaatatatgtataaaaaaacgtgcattcaacttcttaa 36937492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 1009033 - 1008973
Alignment:
Q  222 acatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||| | ||||| ||||||||||| ||| ||||||| | ||||||||| |||||    
T  1009033 acatgttaagaaatttattgtagaaatatatgtatcaaaagtcatacattcaactacttaa 1008973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 276
Target Start/End: Complemental strand, 28675828 - 28675768
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaact 276  Q
    ||||||||||||||||  ||| |||||||||||||| |||| |||| |  |||||||||||    
T  28675828 aagggcacatgttaaggaagtcattatagaaatatacatatcaaaatttttgcattcaact 28675768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 42051233 - 42051189
Alignment:
Q  238 attatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||| |||||||| ||| |||||||||||||||||||| ||||    
T  42051233 attataaaaatatatgtatcaaaagtcgtgcattcaacttgttaa 42051189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 53850206 - 53850146
Alignment:
Q  217 agggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaactt 277  Q
    |||||||||||| ||| | |||||| ||||||  || ||| ||||||||||||||||||||    
T  53850206 agggcacatgtttagaaacttattaaagaaatgcatgtatcaaaagtcgtgcattcaactt 53850146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 32294653 - 32294590
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttct 279  Q
    ||||||||||||||||  | | ||||||||||||||| ||||||||||||||||||||||||||    
T  32294653 aagggcacatgttaaggaactcattatagaaatatatgtattaaaagtcgtgcattcaacttct 32294590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 39420336 - 39420272
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttctt 280  Q
    ||||||||||||||||  | | |||||||||||||| |||||||| |||||||||||||||||||    
T  39420336 aagggcacatgttaaggaactcattatagaaatatacatattaaatgtcgtgcattcaacttctt 39420272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 25626387 - 25626326
Alignment:
Q  221 cacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||||  | ||||||||||||||||  ||| ||||||||| |||||||||||||||    
T  25626387 cacatgttaaggaacttattatagaaatatacgtatcaaaagtcgtacattcaacttcttaa 25626326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 44068920 - 44068859
Alignment:
Q  221 cacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||||  | | ||||||||||||||| ||| |||||||||||| ||||||||||||    
T  44068920 cacatgttaaggaattcattatagaaatatatgtatcaaaagtcgtgcaatcaacttcttaa 44068859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 41890118 - 41890063
Alignment:
Q  227 ttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||| | ||||||||||||||||   || |||||||||||||||||||||||||    
T  41890118 ttaagaaacttattatagaaatatacgcatcaaaagtcgtgcattcaacttcttaa 41890063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 14275773 - 14275839
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||| |||||  | | ||||||||||||||  ||| ||||||| |||||||||||||||||    
T  14275773 aagggcacatattaaggaactcattatagaaatatacgtatcaaaagtcatgcattcaacttcttaa 14275839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 20061198 - 20061132
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||| ||||  | | ||||||||||||||  ||| |||||| ||||||||||||||||||    
T  20061198 aagggcacatgctaaggaactcattatagaaatatacgtatcaaaagttgtgcattcaacttcttaa 20061132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 34141641 - 34141687
Alignment:
Q  236 ttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||| |||||||  |||||||||||||||||||||||| ||||    
T  34141641 ttattataaaaatatacgtattaaaagtcgtgcattcaactttttaa 34141687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 37775749 - 37775684
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||| | |||||||||||| |||  ||| ||||  |||||||||||||||||||    
T  37775749 aagggcacatgttaagaaatttattatagaaa-atagctatcaaaaaccgtgcattcaacttcttaa 37775684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 9950287 - 9950348
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaactt 277  Q
    |||||||||| |||||  | ||||||||||||||||  || ||||||||||||| |||||||    
T  9950287 aagggcacatattaaggaatttattatagaaatatacgtactaaaagtcgtgcagtcaactt 9950348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 36285004 - 36285049
Alignment:
Q  237 tattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||| ||||||| ||||||||||| || |||||||||||||||    
T  36285004 tattataaaaatatacatattaaaagttgtacattcaacttcttaa 36285049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 15079872 - 15079912
Alignment:
Q  242 tagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||| |||  |||||||||||||||||||||||||    
T  15079872 tagaaatatacatagcaaaagtcgtgcattcaacttcttaa 15079912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 11018085 - 11018019
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||  | ||||||||||||||||  |||||||||||||||| ||||||||||||    
T  11018085 aagggcacatgttaaggaacttattatagaaatatacgtattaaaagtcgtgcagtcaacttcttaa 11018019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 282
Target Start/End: Original strand, 42066667 - 42066708
Alignment:
Q  241 atagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  42066667 atagaaatatatatattaaaagtcgtgcattcaacatcttaa 42066708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 31635481 - 31635525
Alignment:
Q  238 attatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||    
T  31635481 attatggaaatatacatattaaaagtcgtgcattcaacttcttaa 31635525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 4658693 - 4658756
Alignment:
Q  219 ggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||||||| | |||||||| ||||| | ||||||||||  ||||||||||||||||||    
T  4658693 ggcacatgttaagatacttattataaaaatacacatattaaaaggtgtgcattcaacttcttaa 4658756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 1035586 - 1035652
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||  | | |||||||||||||| |||| ||||||| |||||||||||| ||||    
T  1035586 aagggcacatgttaaggaactcattatagaaatatacatatcaaaagtcttgcattcaacttattaa 1035652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 5799874 - 5799816
Alignment:
Q  224 atgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||  |||||||||| ||||||| |||| |||||| ||||||||||||||||||    
T  5799874 atgttaaggaagttattataaaaatatacatatcaaaagttgtgcattcaacttcttaa 5799816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 11420853 - 11420897
Alignment:
Q  238 attatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||    
T  11420853 attataaaaatatatatattaaaagttgtgtattcaacttcttaa 11420897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 8644836 - 8644779
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattca 273  Q
    ||||||||||||||| | | | |||||||||||||| | |||||||||| ||||||||    
T  8644836 aagggcacatgttaataaactcattatagaaatatacacattaaaagtcatgcattca 8644779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 15281451 - 15281391
Alignment:
Q  222 acatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||| | | |||||||||||||||||  ||||||| ||||||||| ||||| ||||    
T  15281451 acatgttaaaaaatttattatagaaatatatgcattaaaaatcgtgcatttaactttttaa 15281391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 36012557 - 36012493
Alignment:
Q  218 gggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||||||   | ||||||||||||||||  |||| |||||||| || ||||||||||||    
T  36012557 gggcacatgttaaagaacttattatagaaatataagtattgaaagtcgtacaatcaacttcttaa 36012493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 28337222 - 28337288
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||| | | ||||||||||||||| ||| |||| ||||||| ||||||||||||    
T  28337222 aagggcacatgttaagaaactcattatagaaatatatgtataaaaaatcgtgcaatcaacttcttaa 28337288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 32786808 - 32786874
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||  | | |||||| |||||||  ||| |||||||||||||||||||||||||    
T  32786808 aagggcacatgttaaggaactcattatataaatatacgtatcaaaagtcgtgcattcaacttcttaa 32786874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 45837826 - 45837892
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||| | | |||||||||||| | |||| ||| | |||||||||||||| ||||    
T  45837826 aagggcacatgttaagatactcattatagaaatacacatatcaaacggcgtgcattcaacttattaa 45837892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 2033629 - 2033694
Alignment:
Q  217 agggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||   |||||||||||||| || ||| |||| | ||||||||||||| ||||    
T  2033629 agggcacatgttaagaaccttattatagaaatacatttataaaaaattgtgcattcaactttttaa 2033694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 39837522 - 39837478
Alignment:
Q  238 attatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||||| |  ||| |||||||||||||||||||||||||    
T  39837522 attatagaaatacacgtatcaaaagtcgtgcattcaacttcttaa 39837478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 41144724 - 41144658
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||  | | |||||||||||||| |||| |||||||||||||||||||| ||||    
T  41144724 aagggcacatgttaaggaactcattatagaaatatacatatcaaaagtcgtgcattcaactttttaa 41144658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 967581 - 967642
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaactt 277  Q
    ||||||||||||||||  | | ||||||||||||||| |||||||||| |||||| ||||||    
T  967581 aagggcacatgttaaggaattcattatagaaatatatgtattaaaagtggtgcatccaactt 967642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 16627380 - 16627336
Alignment:
Q  238 attatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||| |||||||| |||||||||||||||||||||||| ||||    
T  16627380 attataaaaatatatgtattaaaagtcgtgcattcaactttttaa 16627336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 554427 - 554365
Alignment:
Q  220 gcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||  | | ||||||||||||||| ||||||||| |||||| ||||||| ||||    
T  554427 gcacatgttaaggaactcattatagaaatatatgtattaaaagccgtgcagtcaactttttaa 554365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 10523677 - 10523739
Alignment:
Q  220 gcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||  | | ||||||||||||||  ||| ||||||||||||||||| |||||||    
T  10523677 gcacatgttaaggaactcattatagaaatatacgtatcaaaagtcgtgcattcaatttcttaa 10523739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 48192710 - 48192644
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||| |||||||||||| | ||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  48192710 aaggacacatgttaagaaacttattatagaaatatacttattaaaaatcgcgcattcaacttcttaa 48192644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 4539877 - 4539940
Alignment:
Q  219 ggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||||||| | | |||||| |||||||| |||||||| ||||||| ||||||||||||    
T  4539877 ggcacatgttaagaaactcattataaaaatatatgtattaaaaatcgtgcaatcaacttcttaa 4539940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 55158566 - 55158506
Alignment:
Q  220 gcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||| | |||||||||||||||| ||||||||  ||||||| ||||||||||||    
T  55158566 gcacatgttaagaaatttattatagaaatatacatattaaa--tcgtgcaatcaacttcttaa 55158506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 18030006 - 18030072
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||  | ||| || |||||||||| ||  ||||||||||||||||| |||||||    
T  18030006 aagggcacatgttaaggaacttaataaagaaatatatgtacgaaaagtcgtgcattcaatttcttaa 18030072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 47006614 - 47006680
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||  | || ||||||||||||    || |||||||||||||||||||||||||    
T  47006614 aagggcacatgttaaggaactttttatagaaatattcgcatcaaaagtcgtgcattcaacttcttaa 47006680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 47069360 - 47069299
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaactt 277  Q
    |||||||||| |||||  | ||||||| |||||||| |||| |||||||||||| |||||||    
T  47069360 aagggcacattttaaggaatttattatggaaatatacatatcaaaagtcgtgcagtcaactt 47069299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 630 - 586
Alignment:
Q  238 attatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||    
T  630 attatagaaatatatgtatcaaaagtcgtgcattcaacttcttaa 586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 7774636 - 7774680
Alignment:
Q  238 attatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||    
T  7774636 attatagaaatatatgtatcaaaagtcgtgcattcaacttcttaa 7774680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 7791283 - 7791327
Alignment:
Q  238 attatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||    
T  7791283 attatagaaatatatgtatcaaaagtcgtgcattcaacttcttaa 7791327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 7811867 - 7811911
Alignment:
Q  238 attatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||    
T  7811867 attatagaaatatatgtatcaaaagtcgtgcattcaacttcttaa 7811911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 5493429 - 5493363
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||| ||| |||||||||||| |   || |||||||||||||||||||| ||||    
T  5493429 aagggcacatgttaagaaagtcattatagaaatacacgcatcaaaagtcgtgcattcaactttttaa 5493363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 6530324 - 6530390
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||  | |||||| |||||||||   || |||||||||||||||||||||||||    
T  6530324 aagggcacatgttaaggaacttattaaagaaatataagcataaaaagtcgtgcattcaacttcttaa 6530390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 31313325 - 31313391
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||||  ||| ||||||||||||||  ||| ||||||| |||||||||||| ||||    
T  31313325 aagggcacatgttaaggaagtcattatagaaatatacgtatcaaaagtcatgcattcaactttttaa 31313391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 40505368 - 40505331
Alignment:
Q  245 aaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||||| |||||||||||||||||||||||||    
T  40505368 aaatatatatatcaaaagtcgtgcattcaacttcttaa 40505331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 45244719 - 45244763
Alignment:
Q  238 attatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||  |||||||||||||||||||||||| ||||    
T  45244719 attatagaaatatacgtattaaaagtcgtgcattcaactttttaa 45244763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 8114443 - 8114389
Alignment:
Q  220 gcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaa 274  Q
    ||||||||||||| | | |||||| |||||||| |||||||||||||||| ||||    
T  8114443 gcacatgttaagaaactcattataaaaatatatgtattaaaagtcgtgcagtcaa 8114389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 34576706 - 34576772
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||| ||||| | ||||||| |||||||    || |||||||||||||||||||||||||    
T  34576706 aagggcacatgctaagaaacttattatggaaatatgcggatcaaaagtcgtgcattcaacttcttaa 34576772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 21574355 - 21574311
Alignment:
Q  238 attatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||||||| | || |||||||||| ||||||||||||||    
T  21574355 attatagaaatataaaaatcaaaagtcgtgtattcaacttcttaa 21574311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 6469671 - 6469627
Alignment:
Q  238 attatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||    
T  6469671 attatagaaatatatttattaaaagtcgtgcagtcaacttcttaa 6469627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 10960546 - 10960612
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||| |||||||||||   | |||||||||||| | |||||||||  |||||||||||||||||||    
T  10960546 aagggtacatgttaagatcctcattatagaaatacacatattaaaaaacgtgcattcaacttcttaa 10960612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 8504508 - 8504552
Alignment:
Q  238 attatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||| |||| ||||||||||||||| |||||||||| |||||||    
T  8504508 attatcgaaacatatatattaaaagttgtgcattcaatttcttaa 8504552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 29286009 - 29286053
Alignment:
Q  238 attatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    ||||||||||||||  ||| |||| ||||||||||||||||||||    
T  29286009 attatagaaatatacgtataaaaaatcgtgcattcaacttcttaa 29286053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 4533 - 4599
Alignment:
Q  216 aagggcacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||| |||||||||||| | | |||||||||||||| |||| ||||  |||||||||||||||||||    
T  4533 aaggacacatgttaagatactcattatagaaatatacatatcaaaatgcgtgcattcaacttcttaa 4599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 3100 - 3039
Alignment:
Q  221 cacatgttaagagagttattatagaaatatatatattaaaagtcgtgcattcaacttcttaa 282  Q
    |||||||||||  | | |||||||| |||||| ||| ||||||| |||||||||||||||||    
T  3100 cacatgttaaggaactcattatagatatatatgtatcaaaagtcatgcattcaacttcttaa 3039  T

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