View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14933_high_7 (Length: 315)
Name: NF14933_high_7
Description: NF14933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14933_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 22 - 305
Target Start/End: Original strand, 1933580 - 1933863
Alignment:
| Q |
22 |
ggattctccggctatttctcaaaaagcgtactcgagcgtctagtaaatctttggccttttcataagcatgcctcccattctaatgggaaatagtaaactt |
121 |
Q |
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| T |
1933580 |
ggattctccggctatttctcaaaaagcgtactcgagcgtctagtaaatctttggccttttcataagcatgcctcccattctaatgggaaatagtaaactt |
1933679 |
T |
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| Q |
122 |
gtaaaatgctcttcatattcttaatgtacatggaaaagtttggaaaaattacggtttttatgcagaccgattatgtactcaaaatcatatgtggtattat |
221 |
Q |
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| T |
1933680 |
gtaaaatgctcttcatattcttaatgtacatggaaaagtttgggaaaattacggtttttatgcagaccgattatgtactcaaaatcatatgtggtattat |
1933779 |
T |
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| Q |
222 |
agacgtgtggttaaaccttttttctttcttcggtcaaggacgtgtggttaaacttacttctcacatttcaatttttctcctttg |
305 |
Q |
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| T |
1933780 |
agacgtgtggttaaaccttttttttttcttcggtcaaggacgtgtggttaaacttacttctcacatttcaatttttctcgtttg |
1933863 |
T |
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Target: chr6 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 3140343 - 3140410
Alignment:
| Q |
22 |
ggattctccggctatttctcaaaaagcgtactcgagcgtctagtaaatctttggccttttcataagca |
89 |
Q |
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| T |
3140343 |
ggattttctggctatttcacaaaaagcatgcttgagcgtctggtaaatctttggccgttccataagca |
3140410 |
T |
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