View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14933_low_10 (Length: 345)

Name: NF14933_low_10
Description: NF14933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14933_low_10
NF14933_low_10
[»] chr7 (58 HSPs)
chr7 (17-279)||(17354281-17354560)
chr7 (257-321)||(22786152-22786216)
chr7 (251-321)||(19840877-19840947)
chr7 (252-321)||(13919776-13919845)
chr7 (257-326)||(13919893-13919962)
chr7 (253-326)||(25428473-25428546)
chr7 (77-229)||(43251878-43252031)
chr7 (259-326)||(45909569-45909636)
chr7 (265-326)||(26190016-26190077)
chr7 (257-318)||(26703438-26703499)
chr7 (254-311)||(31959982-31960039)
chr7 (253-321)||(24539238-24539306)
chr7 (253-313)||(41873431-41873491)
chr7 (257-320)||(27888400-27888463)
chr7 (75-166)||(42306573-42306664)
chr7 (257-321)||(17354642-17354706)
chr7 (253-321)||(17749691-17749759)
chr7 (257-311)||(14759771-14759825)
chr7 (257-311)||(37549625-37549679)
chr7 (259-320)||(20954798-20954859)
chr7 (257-321)||(26703555-26703617)
chr7 (153-233)||(36827809-36827892)
chr7 (78-231)||(40019761-40019917)
chr7 (257-321)||(14795132-14795196)
chr7 (257-321)||(15242124-15242188)
chr7 (257-321)||(19494454-19494518)
chr7 (261-321)||(23934024-23934084)
chr7 (257-321)||(25428594-25428658)
chr7 (257-321)||(27888283-27888347)
chr7 (253-301)||(27949410-27949458)
chr7 (252-320)||(33008100-33008168)
chr7 (259-311)||(35549650-35549702)
chr7 (259-322)||(2520636-2520699)
chr7 (249-311)||(6579993-6580055)
chr7 (259-321)||(17749812-17749874)
chr7 (259-321)||(24539123-24539185)
chr7 (241-321)||(32205064-32205141)
chr7 (262-320)||(46994366-46994424)
chr7 (84-233)||(48633920-48634072)
chr7 (251-292)||(10619535-10619576)
chr7 (248-321)||(11824063-11824136)
chr7 (257-321)||(45909456-45909521)
chr7 (249-289)||(31502471-31502511)
chr7 (257-321)||(31502579-31502643)
chr7 (257-304)||(42863566-42863613)
chr7 (251-321)||(22189934-22190004)
chr7 (251-321)||(44511051-44511121)
chr7 (259-301)||(48374440-48374482)
chr7 (251-320)||(22190057-22190126)
chr7 (253-326)||(34281035-34281108)
chr7 (74-111)||(38318948-38318985)
chr7 (264-313)||(47822105-47822154)
chr7 (257-313)||(2520713-2520769)
chr7 (294-326)||(17354562-17354594)
chr7 (257-321)||(19422949-19423013)
chr7 (196-232)||(37828441-37828477)
chr7 (190-230)||(42306274-42306314)
chr7 (267-319)||(47821990-47822042)
[»] chr2 (50 HSPs)
chr2 (74-233)||(44966023-44966185)
chr2 (251-313)||(37228493-37228555)
chr2 (245-321)||(28898152-28898228)
chr2 (257-321)||(42182890-42182954)
chr2 (252-321)||(4964788-4964857)
chr2 (253-318)||(27968915-27968980)
chr2 (253-318)||(28091607-28091672)
chr2 (253-318)||(28101839-28101904)
chr2 (260-326)||(37228612-37228678)
chr2 (257-321)||(1107039-1107103)
chr2 (98-232)||(40711173-40711310)
chr2 (257-326)||(28898035-28898104)
chr2 (252-321)||(31395560-31395629)
chr2 (257-326)||(37719835-37719904)
chr2 (252-321)||(40535105-40535174)
chr2 (257-321)||(1110199-1110263)
chr2 (249-321)||(18511324-18511396)
chr2 (255-326)||(4964669-4964740)
chr2 (126-217)||(1278158-1278250)
chr2 (257-311)||(37398812-37398866)
chr2 (153-229)||(6461246-6461325)
chr2 (252-321)||(15508910-15508979)
chr2 (262-326)||(1110311-1110375)
chr2 (260-320)||(6420456-6420516)
chr2 (259-311)||(20459031-20459083)
chr2 (102-233)||(25220747-25220881)
chr2 (253-321)||(44274232-44274299)
chr2 (257-321)||(45554568-45554632)
chr2 (254-321)||(6980235-6980302)
chr2 (253-320)||(12989309-12989376)
chr2 (251-326)||(42183002-42183077)
chr2 (264-322)||(8009521-8009579)
chr2 (257-326)||(20951607-20951674)
chr2 (257-321)||(10339769-10339831)
chr2 (257-326)||(15509027-15509096)
chr2 (259-320)||(25238278-25238339)
chr2 (190-231)||(41542760-41542801)
chr2 (253-301)||(5139965-5140013)
chr2 (251-303)||(19193495-19193547)
chr2 (257-321)||(41805891-41805955)
chr2 (257-320)||(26767760-26767823)
chr2 (257-311)||(19190631-19190685)
chr2 (126-180)||(27269155-27269209)
chr2 (196-233)||(2080528-2080565)
chr2 (257-298)||(29806185-29806226)
chr2 (251-311)||(864093-864153)
chr2 (257-285)||(7919281-7919309)
chr2 (253-321)||(9470078-9470146)
chr2 (259-303)||(30706405-30706449)
chr2 (257-321)||(37398929-37398993)
[»] chr6 (28 HSPs)
chr6 (72-231)||(9429568-9429729)
chr6 (76-225)||(17515337-17515489)
chr6 (252-321)||(35128838-35128907)
chr6 (262-326)||(10060972-10061036)
chr6 (251-311)||(19090207-19090267)
chr6 (126-231)||(3337656-3337764)
chr6 (257-321)||(373400-373464)
chr6 (257-321)||(6531413-6531477)
chr6 (257-321)||(19090330-19090394)
chr6 (78-180)||(30323097-30323199)
chr6 (257-326)||(19737433-19737502)
chr6 (253-321)||(32122792-32122860)
chr6 (253-321)||(34905333-34905401)
chr6 (138-231)||(11842267-11842363)
chr6 (253-286)||(6992409-6992442)
chr6 (251-287)||(4595892-4595928)
chr6 (257-326)||(35128725-35128790)
chr6 (266-321)||(5106308-5106363)
chr6 (190-233)||(9318811-9318854)
chr6 (266-321)||(19737550-19737605)
chr6 (76-111)||(35033488-35033523)
chr6 (251-321)||(445813-445883)
chr6 (98-180)||(2359653-2359735)
chr6 (154-231)||(4844463-4844543)
chr6 (258-320)||(34905454-34905516)
chr6 (257-318)||(13001693-13001754)
chr6 (259-320)||(21987410-21987471)
chr6 (257-309)||(10060860-10060912)
[»] chr3 (45 HSPs)
chr3 (73-231)||(53287381-53287542)
chr3 (75-180)||(41519552-41519657)
chr3 (258-321)||(27243047-27243110)
chr3 (262-326)||(24748913-24748977)
chr3 (75-233)||(28554132-28554293)
chr3 (251-326)||(29775134-29775207)
chr3 (251-311)||(37600122-37600182)
chr3 (257-321)||(37600245-37600309)
chr3 (257-321)||(38928007-38928071)
chr3 (250-321)||(21232637-21232708)
chr3 (250-321)||(46237161-46237232)
chr3 (252-321)||(10769840-10769909)
chr3 (257-326)||(54140891-54140960)
chr3 (94-233)||(12789870-12790012)
chr3 (253-321)||(54141008-54141076)
chr3 (102-228)||(20379017-20379146)
chr3 (257-320)||(52123955-52124018)
chr3 (251-321)||(28529248-28529318)
chr3 (78-230)||(42791065-42791218)
chr3 (77-230)||(30732758-30732914)
chr3 (257-320)||(24734823-24734886)
chr3 (76-175)||(39990757-39990856)
chr3 (257-320)||(41451894-41451957)
chr3 (245-320)||(44844100-44844175)
chr3 (110-180)||(24657281-24657351)
chr3 (78-229)||(49447561-49447715)
chr3 (257-326)||(10769723-10769792)
chr3 (259-320)||(20791414-20791475)
chr3 (253-321)||(13809079-13809146)
chr3 (259-311)||(14236146-14236198)
chr3 (257-321)||(20493560-20493624)
chr3 (257-321)||(29389128-29389192)
chr3 (257-321)||(38928124-38928188)
chr3 (248-308)||(40715990-40716050)
chr3 (253-321)||(50661637-50661705)
chr3 (252-290)||(5452056-5452094)
chr3 (259-321)||(27243163-27243225)
chr3 (257-310)||(30624634-30624685)
chr3 (259-301)||(52951495-52951537)
chr3 (257-321)||(46160950-46161012)
chr3 (257-321)||(5452175-5452239)
chr3 (253-321)||(41707554-41707622)
chr3 (249-301)||(48543134-48543186)
chr3 (254-310)||(50320541-50320597)
chr3 (74-114)||(54362011-54362051)
[»] chr5 (52 HSPs)
chr5 (77-229)||(25983031-25983186)
chr5 (251-326)||(34818299-34818374)
chr5 (74-226)||(19961519-19961674)
chr5 (257-321)||(32050425-32050489)
chr5 (252-321)||(42224706-42224775)
chr5 (74-229)||(36527392-36527549)
chr5 (69-215)||(3938367-3938516)
chr5 (250-321)||(40971568-40971639)
chr5 (251-313)||(26072229-26072291)
chr5 (259-321)||(40971453-40971515)
chr5 (257-326)||(42224589-42224658)
chr5 (257-321)||(4959279-4959343)
chr5 (257-321)||(6263884-6263948)
chr5 (73-177)||(18334444-18334548)
chr5 (77-180)||(13951152-13951255)
chr5 (259-321)||(4959396-4959458)
chr5 (102-231)||(14622453-14622584)
chr5 (253-310)||(28611773-28611830)
chr5 (253-318)||(31542361-31542426)
chr5 (259-321)||(6263999-6264061)
chr5 (79-228)||(8233975-8234127)
chr5 (75-228)||(14575930-14576086)
chr5 (257-311)||(17568700-17568754)
chr5 (99-180)||(14309957-14310038)
chr5 (250-311)||(42958566-42958627)
chr5 (251-299)||(40926184-40926232)
chr5 (78-177)||(730782-730881)
chr5 (257-320)||(34368478-34368541)
chr5 (261-326)||(24915168-24915231)
chr5 (261-326)||(24990999-24991062)
chr5 (153-229)||(7406222-7406301)
chr5 (247-321)||(8912628-8912704)
chr5 (257-309)||(2443687-2443739)
chr5 (254-318)||(8912508-8912572)
chr5 (253-321)||(26072100-26072168)
chr5 (253-301)||(30892245-30892293)
chr5 (257-321)||(39246609-39246673)
chr5 (156-231)||(42179786-42179863)
chr5 (252-303)||(17190603-17190654)
chr5 (257-292)||(41105569-41105604)
chr5 (257-311)||(28611903-28611957)
chr5 (259-320)||(2201589-2201650)
chr5 (262-326)||(13456170-13456232)
chr5 (267-320)||(30325883-30325936)
chr5 (78-175)||(30721368-30721465)
chr5 (126-231)||(1860158-1860266)
chr5 (253-301)||(5990514-5990562)
chr5 (263-311)||(28490727-28490775)
chr5 (257-321)||(28490837-28490901)
chr5 (257-321)||(30325989-30326053)
chr5 (78-229)||(40298260-40298414)
chr5 (190-226)||(42011341-42011377)
[»] chr4 (55 HSPs)
chr4 (79-233)||(55322942-55323099)
chr4 (72-233)||(50328373-50328537)
chr4 (65-233)||(53133437-53133608)
chr4 (69-230)||(46393116-46393280)
chr4 (74-231)||(26740737-26740897)
chr4 (76-233)||(34118901-34119061)
chr4 (257-326)||(44832576-44832645)
chr4 (261-326)||(51206156-51206221)
chr4 (251-321)||(8108951-8109021)
chr4 (112-233)||(17340333-17340457)
chr4 (252-306)||(37315559-37315613)
chr4 (253-326)||(39016776-39016849)
chr4 (257-321)||(42862419-42862483)
chr4 (257-321)||(42862536-42862600)
chr4 (258-321)||(40812039-40812102)
chr4 (257-310)||(2187812-2187865)
chr4 (257-326)||(37315673-37315742)
chr4 (153-233)||(47388520-47388603)
chr4 (252-320)||(8109074-8109142)
chr4 (247-311)||(13069932-13069996)
chr4 (77-181)||(38354254-38354358)
chr4 (118-229)||(41236021-41236135)
chr4 (259-326)||(13070053-13070120)
chr4 (250-309)||(30866923-30866982)
chr4 (252-318)||(44832459-44832525)
chr4 (253-313)||(37306401-37306461)
chr4 (257-321)||(47237856-47237920)
chr4 (75-233)||(49250040-49250201)
chr4 (100-233)||(31204310-31204446)
chr4 (251-313)||(51475157-51475219)
chr4 (252-321)||(2187928-2187997)
chr4 (78-175)||(9319862-9319959)
chr4 (75-180)||(31216961-31217066)
chr4 (253-321)||(2088780-2088848)
chr4 (253-321)||(39016660-39016728)
chr4 (266-318)||(39810529-39810581)
chr4 (257-321)||(40991704-40991768)
chr4 (257-321)||(43771127-43771191)
chr4 (108-227)||(45891303-45891425)
chr4 (140-227)||(48622251-48622341)
chr4 (261-320)||(8567893-8567952)
chr4 (272-311)||(30867057-30867096)
chr4 (260-310)||(20454666-20454716)
chr4 (253-311)||(24834575-24834633)
chr4 (259-321)||(27654595-27654657)
chr4 (250-291)||(20225347-20225388)
chr4 (252-301)||(31699473-31699522)
chr4 (259-312)||(34004748-34004801)
chr4 (259-320)||(51904616-51904677)
chr4 (251-303)||(6011577-6011629)
chr4 (261-301)||(16178589-16178629)
chr4 (261-321)||(20454545-20454605)
chr4 (257-301)||(26361307-26361351)
chr4 (261-321)||(50164400-50164460)
chr4 (258-286)||(51206057-51206085)
[»] chr1 (60 HSPs)
chr1 (246-321)||(11135729-11135804)
chr1 (257-326)||(41095607-41095676)
chr1 (253-321)||(41095724-41095792)
chr1 (241-326)||(11135852-11135937)
chr1 (75-223)||(39275818-39275969)
chr1 (257-321)||(41917996-41918060)
chr1 (251-321)||(11430436-11430506)
chr1 (257-311)||(11430568-11430622)
chr1 (257-327)||(13388335-13388405)
chr1 (75-180)||(15279059-15279164)
chr1 (251-320)||(32848699-32848768)
chr1 (253-318)||(50773105-50773170)
chr1 (67-233)||(42549188-42549357)
chr1 (107-233)||(51295718-51295846)
chr1 (108-233)||(29587123-29587251)
chr1 (259-321)||(50424866-50424928)
chr1 (153-233)||(43949138-43949221)
chr1 (118-233)||(10881829-10881947)
chr1 (253-321)||(13114785-13114853)
chr1 (108-230)||(18023786-18023911)
chr1 (257-320)||(30678910-30678973)
chr1 (247-301)||(29068216-29068270)
chr1 (257-326)||(29418594-29418664)
chr1 (257-321)||(14094116-14094180)
chr1 (251-311)||(18157033-18157093)
chr1 (273-321)||(28109885-28109933)
chr1 (259-311)||(32848583-32848635)
chr1 (126-232)||(51050051-51050160)
chr1 (259-321)||(13114670-13114732)
chr1 (250-311)||(8899141-8899202)
chr1 (257-326)||(14093999-14094068)
chr1 (257-306)||(44739119-44739168)
chr1 (259-326)||(4578687-4578752)
chr1 (257-321)||(9165303-9165367)
chr1 (249-301)||(24886175-24886227)
chr1 (73-136)||(10783568-10783631)
chr1 (257-292)||(13889290-13889325)
chr1 (198-233)||(39412459-39412494)
chr1 (251-310)||(43275770-43275829)
chr1 (140-226)||(44595706-44595795)
chr1 (262-321)||(50773226-50773285)
chr1 (253-283)||(9165426-9165456)
chr1 (257-291)||(13388472-13388506)
chr1 (267-321)||(15661009-15661063)
chr1 (253-291)||(41918131-41918169)
chr1 (72-121)||(13771257-13771305)
chr1 (259-320)||(19101602-19101663)
chr1 (254-291)||(27570372-27570409)
chr1 (251-320)||(28109986-28110055)
chr1 (257-310)||(41948145-41948198)
chr1 (252-321)||(43851150-43851219)
chr1 (273-322)||(50308774-50308823)
chr1 (257-301)||(3872768-3872812)
chr1 (257-321)||(6133739-6133803)
chr1 (257-321)||(19101716-19101780)
chr1 (257-321)||(22540369-22540433)
chr1 (257-309)||(25543341-25543393)
chr1 (101-204)||(33828101-33828207)
chr1 (101-204)||(33839758-33839864)
chr1 (257-321)||(39039470-39039534)
[»] scaffold0006 (1 HSPs)
scaffold0006 (75-231)||(50604-50758)
[»] chr8 (37 HSPs)
chr8 (102-233)||(39108538-39108672)
chr8 (258-318)||(1205829-1205889)
chr8 (75-233)||(4993232-4993391)
chr8 (266-321)||(35689490-35689545)
chr8 (78-180)||(5957054-5957156)
chr8 (260-326)||(7599423-7599489)
chr8 (268-313)||(35689606-35689651)
chr8 (69-231)||(10361128-10361294)
chr8 (82-233)||(40740670-40740824)
chr8 (253-321)||(6387560-6387626)
chr8 (257-317)||(8914772-8914832)
chr8 (257-321)||(13407322-13407386)
chr8 (107-229)||(19174071-19174197)
chr8 (257-321)||(23142938-23143002)
chr8 (257-320)||(16983512-16983575)
chr8 (263-321)||(13407439-13407497)
chr8 (98-222)||(36434664-36434792)
chr8 (244-321)||(43026282-43026356)
chr8 (96-177)||(11008063-11008144)
chr8 (89-228)||(32062259-32062401)
chr8 (254-311)||(32072095-32072152)
chr8 (252-309)||(43121611-43121668)
chr8 (260-316)||(5980001-5980057)
chr8 (257-289)||(23142816-23142848)
chr8 (257-292)||(1961404-1961439)
chr8 (257-320)||(16983395-16983458)
chr8 (251-321)||(9952872-9952942)
chr8 (252-326)||(28211880-28211953)
chr8 (260-321)||(12212126-12212187)
chr8 (260-321)||(12456554-12456615)
chr8 (257-310)||(31691637-31691690)
chr8 (154-230)||(43027844-43027923)
chr8 (257-321)||(7599537-7599601)
chr8 (253-309)||(16896373-16896429)
chr8 (257-309)||(28413996-28414048)
chr8 (76-136)||(32268789-32268848)
chr8 (65-105)||(38666335-38666375)
[»] scaffold0119 (1 HSPs)
scaffold0119 (126-217)||(22841-22933)
[»] scaffold0054 (1 HSPs)
scaffold0054 (260-326)||(30914-30980)
[»] scaffold0027 (2 HSPs)
scaffold0027 (75-123)||(16788-16836)
scaffold0027 (140-232)||(16865-16960)
[»] scaffold0016 (1 HSPs)
scaffold0016 (257-311)||(204707-204761)
[»] scaffold0192 (1 HSPs)
scaffold0192 (74-111)||(13357-13394)
[»] scaffold0005 (1 HSPs)
scaffold0005 (259-311)||(296964-297016)


Alignment Details
Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 17354281 - 17354560
Alignment:
Q  17 gagagagtattaagtaaacattgttgtttataccatatactatatccgttataaattagggaaatgttaacttgtgtcctcaaggcacacgttaatgatt 116  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  17354281 gagagggtattaagtaaacattgttgtttataccatatactatctccgttataaattagggaaatgttaatttatgccctcaaggcacacgttaatgatt 17354380  T
Q  117 taaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttg 213  Q
    ||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||   || ||||| ||||||||||||||||||||||||    
T  17354381 taaatatgg-aattatttattggaatgtgggcatatcatttaatctttaactttttaatcaattaaatgcataaaattttatagaatatttcttcttttg 17354479  T
Q  214 ggtttcttaacatgtgccct---------------cactaccttataaattaatgagaaatgctagcaacactctcttttg 279  Q
    ||||||||||||||||||||               ||||||| ||||||||||||||||||||||||||||||||||||||    
T  17354480 ggtttcttaacatgtgccctaagggcacaagttaacactaccctataaattaatgagaaatgctagcaacactctcttttg 17354560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 22786152 - 22786216
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  22786152 aatgctagcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaa 22786216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 19840877 - 19840947
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||| |||||||    
T  19840877 atgaggaatgctagcaacactctattttgagcactctctctagcactcactcttttattgggtgaaatcaa 19840947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 321
Target Start/End: Original strand, 13919776 - 13919845
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||| |||||||    
T  13919776 tgagaaatgctagcaacactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaa 13919845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 13919962 - 13919893
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||| ||||    
T  13919962 aatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtag 13919893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 326
Target Start/End: Original strand, 25428473 - 25428546
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||| |||||||||||||||||||||||||||| || |||||||| ||||||||| ||||||||| ||||    
T  25428473 gagaaatgatagcaacactctcttttgagcactctctttagcactcactcttttattggataaaatcaatgtag 25428546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 229
Target Start/End: Complemental strand, 43252031 - 43251878
Alignment:
Q  77 gaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatc 176  Q
    |||| |||||| |||| ||||||||| || ||||||||||||||||| ||||||||||||  ||||||| |  |  |||||||||||||| |||||||||    
T  43252031 gaaacgttaacatgtgccctcaaggc-caagttaatgatttaaatatagaaataatttattagaatgtgtgttttacatttaatctttaattttttaatc 43251933  T
Q  177 aatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtg 229  Q
    ||||   || ||||| ||||| | |||||||||| ||||  |||||||||||||||    
T  43251932 aattaaatgcataaaattttaaataatatttctt-ttttaagtttcttaacatgtg 43251878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 45909636 - 45909569
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    ||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||| ||||    
T  45909636 tgctagcaacactctcttttgaatactctctctaacactcactcttttattgggtaaaatcaatgtag 45909569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 26190077 - 26190016
Alignment:
Q  265 caacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||||| |||| |||||| |||||||| ||||||||||||||||||||||||    
T  26190077 caacactctcttttgaacactttctctaacactcactcttttattgggtaaaatcaacgtag 26190016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 26703438 - 26703499
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaat 318  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||    
T  26703438 aatgctagcaacactctcttctgagcactctctctagcactcactcttttattgggtgaaat 26703499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 31960039 - 31959982
Alignment:
Q  254 agaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||    
T  31960039 agaaatgctaacaacactctcttttgagcactctctctagcactcacttatttattgg 31959982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 24539306 - 24539238
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||| |||||||||||||  ||||||||||| |||||||| ||||||||| |||||||||    
T  24539306 gagaaatgctagcgacactctcttttggacactctctctaacactcactcttttattggataaaatcaa 24539238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 41873431 - 41873491
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggt 313  Q
    |||||||||||| ||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  41873431 gagaaatgctaggaacactctctttctagcactctctctaacactcacttttttattgggt 41873491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 27888463 - 27888400
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||||||||||||||||||||||||||||||||||| |||||||| | ||||||| | ||||||    
T  27888463 aatgctagcaacactctcttttgagcactctctctaacactcactctcttattggtttaaatca 27888400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 42306664 - 42306573
Alignment:
Q  75 gggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaa 166  Q
    |||||||| |||||| || |||||||||||| ||||| ||||||||||| |||||||||||| | |||| | ||||  ||||||||||||||    
T  42306664 gggaaatgctaacttctgccctcaaggcacaagttaacgatttaaatatagaaataatttattgaaatgcgtgcattgcatttaatctttaa 42306573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 17354706 - 17354642
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||| |||||||||||||||||| |||||| | ||||||||| | |||||||    
T  17354706 aatgctagcaacactcttttttgagcactctctctaacactcattcttttattggatgaaatcaa 17354642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 17749691 - 17749759
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||| ||||||| |||||  ||||||||||| |||||||| ||||||||| |||||||||    
T  17749691 gagaaatgctagcgacactcttttttggacactctctctaacactcactcttttattggataaaatcaa 17749759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 14759825 - 14759771
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    |||||||||||||||||||||||||||||||| ||| ||| |||| |||||||||    
T  14759825 aatgctagcaacactctcttttgagcactctccctagcacccactcttttattgg 14759771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 311
Target Start/End: Original strand, 37549625 - 37549679
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    ||||||||||||||||||||||||||||| |||||| |||| ||| |||||||||    
T  37549625 aatgctagcaacactctcttttgagcactttctctagcacttactcttttattgg 37549679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 20954859 - 20954798
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||||||||||||||||||| | ||||||||| | |||||||||||||||||| | ||||||    
T  20954859 tgctagcaacactctcttttcaacactctctcaaacactcacttttttattggcttaaatca 20954798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 26703617 - 26703555
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||  |||||||| |||||||| |||||||| ||||||||||| |||||||    
T  26703617 aatgctagcaacactct--tttgagcattctctctagcactcactcttttattgggtgaaatcaa 26703555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 36827892 - 36827809
Alignment:
Q  153 catttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    |||||||| |||||||| ||||| ||||   || | ||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  36827892 catttaatttttaacttattaatgaattgaatgcacaaaattttagagaatatttcttcttttaggtttcttaacatgtgccct 36827809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 231
Target Start/End: Complemental strand, 40019917 - 40019761
Alignment:
Q  78 aaatgttaacttgtgtcctcaag-gcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatc 176  Q
    ||||||||||||||| ||||||  ||||| |||||||||  |||||| |||| || |||| | |||||| ||||  |||||||| |||||||||||||||    
T  40019917 aaatgttaacttgtgccctcaaaagcacaagttaatgatc-aaatatagaaaaaacttattgaaatgtgtgcattgcatttaatatttaactttttaatc 40019819  T
Q  177 aatttgaat----aaacttttatagaatatttcttcttttgggtttcttaacatgtgcc 231  Q
     |||| |||    |||  |||| |||||  |||||||||| ||||||||||||||||||    
T  40019818 -atttaaatacacaaaagtttagagaatgcttcttcttttaggtttcttaacatgtgcc 40019761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 14795132 - 14795196
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||| ||||| | ||||||||||| || ||||||||||||||| | |||||||    
T  14795132 aatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaa 14795196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 15242124 - 15242188
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||| ||||| | ||||||||||| || ||||||||||||||| | |||||||    
T  15242124 aatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaa 15242188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 19494518 - 19494454
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||| |||||||||||||| ||| ||||||  ||||||| ||||||||||| |||||||    
T  19494518 aatgctagcagcactctcttttgagtactttctctagtactcactcttttattgggtgaaatcaa 19494454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 23934084 - 23934024
Alignment:
Q  261 ctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||| |||||| | |||| |||| ||| |||||||||||||||||||    
T  23934084 ctagcaacactctcttttaagcactttgtctagcacttactcttttattgggtaaaatcaa 23934024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 25428658 - 25428594
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||||||||||||||| | ||  ||||||| |||||||| || |||||||    
T  25428658 aatgctagcaacactctcttttgagcactctttttagtactcactcttttattgtgtgaaatcaa 25428594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 27888283 - 27888347
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||| ||||||||||||||||||| |||||||  | | ||||| |||||||||    
T  27888283 aatgctagcaacactcacttttgagcactctctctaacactcaccctctcattggataaaatcaa 27888347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 27949458 - 27949410
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcact 301  Q
    |||||||||||||||||||||||||||| |||||||||||  |||||||    
T  27949458 gagaaatgctagcaacactctcttttgaacactctctctaatactcact 27949410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 320
Target Start/End: Original strand, 33008100 - 33008168
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||| |||||||||||||||| ||||||| |||| |||||| |||||||| ||||||||| | ||||||    
T  33008100 tgaggaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatca 33008168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 35549650 - 35549702
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    |||||||||||||||||||| | ||||||||||||||||||  ||||||||||    
T  35549650 tgctagcaacactctcttttcaacactctctctaccactcatctttttattgg 35549702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 2520636 - 2520699
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaac 322  Q
    |||||| ||||||||||||| | ||||||||| | |||||||| ||||||||||| ||||||||    
T  2520636 tgctaggaacactctcttttcaacactctctccaacactcactcttttattgggtgaaatcaac 2520699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 6579993 - 6580055
Alignment:
Q  249 taatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    |||||||| |||||| |||||||||||||||| |||||||||||  ||||||| | |||||||    
T  6579993 taatgagatatgctaccaacactctcttttgaacactctctctaatactcactctcttattgg 6580055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 17749874 - 17749812
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||||  ||||||||||| |||||||| | | ||||||| |||||||    
T  17749874 tgctagcaacactctcttttggacactctctctaacactcactctctcattgggttaaatcaa 17749812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 321
Target Start/End: Original strand, 24539123 - 24539185
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||||  ||||||||||| |||||||| | | ||||||| |||||||    
T  24539123 tgctagcaacactctcttttggacactctctctaacactcactctctcattgggttaaatcaa 24539185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 32205064 - 32205141
Alignment:
Q  241 ttataaattaatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||| ||| ||| |||||||||||||||| ||||||| ||||||||||   ||||||| ||||||||| | |||||||    
T  32205064 ttataaaataaagaggaatgctagcaacactcacttttgaacactctctct---actcactcttttattggatgaaatcaa 32205141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 320
Target Start/End: Original strand, 46994366 - 46994424
Alignment:
Q  262 tagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    ||||||||||||||||| | | ||||||||| |||||||||||||||||| | ||||||    
T  46994366 tagcaacactctctttttaacgctctctctaacactcacttttttattggcttaaatca 46994424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 233
Target Start/End: Complemental strand, 48634072 - 48633920
Alignment:
Q  84 taacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt--- 180  Q
    ||||||||| ||| ||| |||| |||||| | | ||||||  ||||| ||||| ||||||||  |||    |||| |||||||||||||||| ||||       
T  48634072 taacttgtgcccttaagacacaagttaataaataaaatataaaaatagtttattggaatgtgtacattgtctttagtctttaactttttaatgaattgaa 48633973  T
Q  181 tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    || ||||| ||||| ||||  ||| ||||||| ||||||||||||||||||||    
T  48633972 tgcataaaattttagagaaatttttttcttttaggtttcttaacatgtgccct 48633920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 10619576 - 10619535
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctcta 292  Q
    ||||| |||||||||||||||||||||||| |||||||||||    
T  10619576 atgaggaatgctagcaacactctcttttgatcactctctcta 10619535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 11824063 - 11824136
Alignment:
Q  248 ttaatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||| |||||||||||  |||| | | ||||||||| |||||||| ||||||||| | |||||||    
T  11824063 ttaatgagaaatgttagcaacactcatttttcaacgctctctctagcactcactcttttattggatgaaatcaa 11824136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 45909456 - 45909521
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcact-tttttattgggtaaaatcaa 321  Q
    ||||||| ||||||| |||||||||||||||| ||| || ||||| |||||||||||| |||||||    
T  45909456 aatgctatcaacactatcttttgagcactctccctagcattcactctttttattgggtgaaatcaa 45909521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 31502471 - 31502511
Alignment:
Q  249 taatgagaaatgctagcaacactctcttttgagcactctct 289  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  31502471 taatgagaaatgctagcaacactctcttttaaacactctct 31502511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 31502643 - 31502579
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||| ||||| | || |||||||| |||||||| ||||||||| | |||||||    
T  31502643 aatgctagcaacactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaa 31502579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 304
Target Start/End: Complemental strand, 42863613 - 42863566
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcactttt 304  Q
    |||||||||||||||| ||||| | ||||||||||| |||||||||||    
T  42863613 aatgctagcaacactcacttttaaacactctctctaacactcactttt 42863566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 22189934 - 22190004
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||| |||||||| |||||||  |||| | ||||||||||| |||||||| ||||||||| | |||||||    
T  22189934 atgaggaatgctagaaacactcatttttcaacactctctctagcactcactcttttattggatgaaatcaa 22190004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 44511121 - 44511051
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||| || |||| |||||||  ||||| | ||||||||||| |||||||||||||||||| | |||||||    
T  44511121 atgagtaaagctaacaacacttacttttcaacactctctctagcactcacttttttattggatgaaatcaa 44511051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 301
Target Start/End: Original strand, 48374440 - 48374482
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcact 301  Q
    |||||||||||||||||||||| |||||||||||  |||||||    
T  48374440 tgctagcaacactctcttttgaacactctctctaatactcact 48374482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 22190126 - 22190057
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    ||||| ||||||| |||||||||||||||| ||| |||||||  |||||||  |||||||| | ||||||    
T  22190126 atgagtaatgctaacaacactctcttttgaacaccctctctaatactcactcgtttattggtttaaatca 22190057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 326
Target Start/End: Complemental strand, 34281108 - 34281035
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    ||||||||||| |||||||||||||||| || |||||||| ||||   | ||||||| ||||||| ||| ||||    
T  34281108 gagaaatgctatcaacactctcttttgaacattctctctaacacttgttcttttattaggtaaaaccaatgtag 34281035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 38318948 - 38318985
Alignment:
Q  74 agggaaatgttaacttgtgtcctcaaggcacacgttaa 111  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  38318948 agggaaatgttaacttgtgtccttaaggcacaagttaa 38318985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 47822154 - 47822105
Alignment:
Q  264 gcaacactctcttttgagcactctctctaccactcacttttttattgggt 313  Q
    ||||||||||||||  ||||||||||||| |||||||| || ||||||||    
T  47822154 gcaacactctctttcaagcactctctctaacactcactcttctattgggt 47822105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 313
Target Start/End: Complemental strand, 2520769 - 2520713
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggt 313  Q
    |||||||||||||||||||||| | ||||||| ||| |||||||   ||||||||||    
T  2520769 aatgctagcaacactctcttttcaacactctcactatcactcacacatttattgggt 2520713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 326
Target Start/End: Original strand, 17354562 - 17354594
Alignment:
Q  294 cactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||||||||||||||||| ||||    
T  17354562 cactcacttttttattgggtaaaatcaatgtag 17354594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 19423013 - 19422949
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| ||||||||||| ||||| | ||||||||||| |||||||| ||| ||||| | |||||||    
T  19423013 aatgttagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaa 19422949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 37828441 - 37828477
Alignment:
Q  196 agaatatttcttcttttgggtttcttaacatgtgccc 232  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  37828441 agaatatttcttcttttaggtttcttaacatatgccc 37828477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 42306314 - 42306274
Alignment:
Q  190 ttttatagaatatttcttcttttgggtttcttaacatgtgc 230  Q
    ||||| ||| |||||||||||||| ||||||||||||||||    
T  42306314 ttttagagagtatttcttcttttgagtttcttaacatgtgc 42306274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 47821990 - 47822042
Alignment:
Q  267 acactctcttttgagcactctctctaccactcacttttttattgggtaaaatc 319  Q
    |||||||||||  ||||||||||||| |||||||| || |||||||| |||||    
T  47821990 acactctctttctagcactctctctaacactcactcttatattgggtgaaatc 47822042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 7e-43; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 74 - 233
Target Start/End: Complemental strand, 44966185 - 44966023
Alignment:
Q  74 agggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaacttttta 173  Q
    ||||||||||||||||||| ||| |||||||| |||||||||| |||||| ||| |||||||| |||||||| ||||  |||||||||||||||||||||    
T  44966185 agggaaatgttaacttgtgcccttaaggcacaagttaatgattcaaatatagaattaatttattggaatgtgtgcattgcatttaatctttaacttttta 44966086  T
Q  174 atcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    || ||||   || | ||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  44966085 atgaattgaatgcacaaaattttagagaatatttcttcttttgggtttcttaacatgtgccct 44966023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 37228493 - 37228555
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggt 313  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  37228493 atgagaaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggt 37228555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 28898228 - 28898152
Alignment:
Q  245 aaattaatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| |||||| ||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||| |||||||    
T  28898228 aaatgaatgaggaatgctagcaacactcttttttgagcactctctctagcactcactcttttattgggtgaaatcaa 28898152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 42182890 - 42182954
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  42182890 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaa 42182954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 4964857 - 4964788
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| ||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| |||||||    
T  4964857 tgaggaatgctagcaacattctcttttgagtactctctctagcactcacttttttattgggtgaaatcaa 4964788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 27968915 - 27968980
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaat 318  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||||    
T  27968915 gagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 27968980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 28091672 - 28091607
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaat 318  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||||    
T  28091672 gagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28091607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 28101904 - 28101839
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaat 318  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||||    
T  28101904 gagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28101839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 326
Target Start/End: Complemental strand, 37228678 - 37228612
Alignment:
Q  260 gctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||| ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| ||||    
T  37228678 gctaccaacactctcttttgagcactctttctagcactcacttttttattgggtgaaatcaatgtag 37228612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 1107039 - 1107103
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||| ||||||||||| |||||||    
T  1107039 aatgttagcaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaa 1107103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 232
Target Start/End: Complemental strand, 40711310 - 40711173
Alignment:
Q  98 aaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaactttta 194  Q
    |||||||| ||| |||||| ||||||  |||| |||||| | |||||| | ||   ||||||| |||||||||||||| ||||   || | ||| |||||    
T  40711310 aaggcacaagttcatgattcaaatataaaaattatttattgaaatgtgtgtattgtatttaatttttaactttttaatgaattaaatgcacaaaatttta 40711211  T
Q  195 tagaatatttcttcttttgggtttcttaacatgtgccc 232  Q
    || |||||||||||||||| ||||||||||||||||||    
T  40711210 tacaatatttcttcttttgtgtttcttaacatgtgccc 40711173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 28898035 - 28898104
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    ||||||||||||||||||||||||| ||||||| || |||||||| ||||||||| | ||||||| ||||    
T  28898035 aatgctagcaacactctcttttgagtactctctttagcactcactcttttattggatgaaatcaatgtag 28898104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 31395629 - 31395560
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| |||| |||||||||||||||||||||||||||| || ||||||||  |||||||||| |||||||    
T  31395629 tgaggaatgttagcaacactctcttttgagcactctctttagcactcactcctttattgggtgaaatcaa 31395560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 37719835 - 37719904
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||| ||||||||| | ||||||| ||||    
T  37719835 aatgctagcaacattctcttttgagcactctttctagcactcactcttttattggatgaaatcaatgtag 37719904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 40535174 - 40535105
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| ||||||| ||||||| ||||| |||||| ||||||| |||||||| |||||||||||||||||||    
T  40535174 tgaggaatgctaacaacactatctttcgagcaccctctctaacactcactcttttattgggtaaaatcaa 40535105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 1110199 - 1110263
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||| |||||||| || |||||||    
T  1110199 aatgctagcaacactctctttcgagcattctctctaacactcactcttttattgagtgaaatcaa 1110263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 18511396 - 18511324
Alignment:
Q  249 taatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||| |||||||||||||||| ||||| | ||||||| ||| |||||||| ||||||||| |||||||||    
T  18511396 taatgaggaatgctagcaacactcactttttaacactctcactatcactcactcttttattggataaaatcaa 18511324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 4964669 - 4964740
Alignment:
Q  255 gaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    ||||||||||||| ||||||||||||  |||||||||| |||||||| ||||||||| ||| ||||| ||||    
T  4964669 gaaatgctagcaatactctcttttgaatactctctctagcactcactcttttattggataagatcaatgtag 4964740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 1278158 - 1278250
Alignment:
Q  126 aaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaa--tttgaataaacttttatagaatatttcttcttttgggtt 217  Q
    ||||||||||| |||| ||| ||||| ||||||||||||||||||||||| ||  |||| | ||| ||||||| |||||||||| |||||||||    
T  1278158 aaataatttattggaacgtgcgcata-catttaatctttaactttttaataaatttttgcacaaaattttataaaatatttctttttttgggtt 1278250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 311
Target Start/End: Original strand, 37398812 - 37398866
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    ||||||||||||||||| ||||||||| |||||||| |||| |||||||||||||    
T  37398812 aatgctagcaacactcttttttgagcattctctctaacacttacttttttattgg 37398866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 6461325 - 6461246
Alignment:
Q  153 catttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtg 229  Q
    ||||||||||||||||||||||| ||||   || ||||| ||||  |||||||||||||||||| |||| ||||||||||    
T  6461325 catttaatctttaactttttaatgaattgaatgtataaaattttggagaatatttcttcttttgagttttttaacatgtg 6461246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 321
Target Start/End: Original strand, 15508910 - 15508979
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| |||| ||||||||||||||||||| |||||| |||| |||||||| |||||||| || |||||||    
T  15508910 tgaggaatgttagcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaa 15508979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 326
Target Start/End: Complemental strand, 1110375 - 1110311
Alignment:
Q  262 tagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||| ||||||||||||| |||| || ||||| ||||||||||| ||||||| ||||    
T  1110375 tagcaacactcttttttgagcactctttctaacattcactcttttattgggtgaaatcaatgtag 1110311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 6420456 - 6420516
Alignment:
Q  260 gctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    ||||||||||||||||||| | ||||||||| |||||||||||| ||||||| | ||||||    
T  6420456 gctagcaacactctcttttcaacactctctccaccactcactttcttattggcttaaatca 6420516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 20459083 - 20459031
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    |||||||||||||||||||| | ||||||||| |||||||||||| |||||||    
T  20459083 tgctagcaacactctcttttcaacactctctccaccactcactttcttattgg 20459031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 25220747 - 25220881
Alignment:
Q  102 cacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttataga 198  Q
    |||| |||||| |||||||||| |||||||||||| | ||| || | ||  | |||||||||||| |||||||||||||   |  ||||| ||||| | |    
T  25220747 cacaagttaattatttaaatatagaaataatttattgaaatttgtgtattgcttttaatctttaattttttaatcaattaaattcataaaattttagaaa 25220846  T
Q  199 atatttcttcttttgggtttcttaacatgtgccct 233  Q
    || ||||||||||||  ||| ||||||||||||||    
T  25220847 atgtttcttcttttgaattttttaacatgtgccct 25220881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 44274232 - 44274299
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||| |||| |||||||||||||| || ||||| ||| ||||| |||||||||    
T  44274232 gagaaatgctagcaacactcacttt-gagcactctctctaacattcactctttcattggataaaatcaa 44274299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 45554568 - 45554632
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||| ||||| | ||||||||||| |||||||| ||||||||| | |||||||    
T  45554568 aatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaa 45554632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 321
Target Start/End: Complemental strand, 6980302 - 6980235
Alignment:
Q  254 agaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||| || ||||| | ||||||||||| |||||||| ||||||||| | |||||||    
T  6980302 agaaatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatcaa 6980235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 320
Target Start/End: Complemental strand, 12989376 - 12989309
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    ||||| |||||||||||||||||||||| |||||||||||  ||||||| | ||||||| | ||||||    
T  12989376 gagaagtgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatca 12989309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 326
Target Start/End: Complemental strand, 42183077 - 42183002
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    ||||| |||||||| ||||||||||||||| |||||||||   |||| ||| ||||||||||| ||||||| ||||    
T  42183077 atgaggaatgctagtaacactctcttttgaacactctctccggcactaactcttttattgggtgaaatcaatgtag 42183002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 8009521 - 8009579
Alignment:
Q  264 gcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaac 322  Q
    ||||||||||||||||| |||||| |||| ||||||||||||| |||| | ||||||||    
T  8009521 gcaacactctcttttgaacactctttctaacactcacttttttgttggatgaaatcaac 8009579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 20951607 - 20951674
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||||||||||||||||  ||||||| |||| | | ||||||||||| ||||||| ||||    
T  20951607 aatgctagcaacactctcttttgagca--ctctctagcacttattcttttattgggtgaaatcaatgtag 20951674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 10339769 - 10339831
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||| |||  ||||| ||||||||||| |||||||| |||||||||| ||||||||    
T  10339769 aatgctagcaacaatct--tttgaacactctctctagcactcactattttattggggaaaatcaa 10339831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 15509096 - 15509027
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||| ||||||||||||||||| |||||||||| || |||| ||| ||| ||||||| ||||||| ||||    
T  15509096 aatgttagcaacactctctttttagcactctctatatcacttactctttaattgggtgaaatcaatgtag 15509027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 25238278 - 25238339
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    ||||| |||||||||||||| | |||| |||||| |||||||||||||||||| | ||||||    
T  25238278 tgctaacaacactctcttttaaacactttctctagcactcacttttttattggtttaaatca 25238339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 41542801 - 41542760
Alignment:
Q  190 ttttatagaatatttcttcttttgggtttcttaacatgtgcc 231  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  41542801 ttttagagaatatttcttcttttgagtttcttaacatgtgcc 41542760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 5139965 - 5140013
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcact 301  Q
    |||||||||||| ||||||||||||  ||||||||||||| ||||||||    
T  5139965 gagaaatgctaggaacactctctttctagcactctctctaacactcact 5140013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 19193495 - 19193547
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttt 303  Q
    ||||| |||||||||||||||||||||| | ||||||||| | ||||||||||    
T  19193495 atgaggaatgctagcaacactctcttttcaacactctctccaacactcacttt 19193547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 41805955 - 41805891
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||| |||||  |||| ||| || |||||||| ||||||||| |||||||||    
T  41805955 aatgctagcaacactctattttggacactttctttaacactcactcttttattggataaaatcaa 41805891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 26767760 - 26767823
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    ||||||||||||||| |||||||| |||||| ||||  ||||||| ||||||||| | ||||||    
T  26767760 aatgctagcaacactttcttttgaacactctatctaatactcactcttttattggtttaaatca 26767823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 311
Target Start/End: Original strand, 19190631 - 19190685
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    ||||||||  |||||||||||| ||||||||||||| |||||| ||| |||||||    
T  19190631 aatgctagagacactctcttttaagcactctctctaacactcattttcttattgg 19190685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 27269209 - 27269155
Alignment:
Q  126 aaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt 180  Q
    ||||||||||| | |||||| |||| |||||||| ||||||||||||||| ||||    
T  27269209 aaataatttattgaaatgtgtgcatttcatttaacctttaactttttaatgaatt 27269155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 2080565 - 2080528
Alignment:
Q  196 agaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  2080565 agaatatttttgcttttgggtttcttaacatgtgccct 2080528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 29806226 - 29806185
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactc 298  Q
    |||| |||||||||||||||||||||| |||||||| |||||    
T  29806226 aatgttagcaacactctcttttgagcattctctctaacactc 29806185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 864093 - 864153
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    ||||||||| |||| ||||||||||||  ||||||||||||| |||| | |||| ||||||    
T  864093 atgagaaatactaggaacactctctttctagcactctctctaacacttatttttctattgg 864153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 285
Target Start/End: Original strand, 7919281 - 7919309
Alignment:
Q  257 aatgctagcaacactctcttttgagcact 285  Q
    |||||||||||||||||||||||||||||    
T  7919281 aatgctagcaacactctcttttgagcact 7919309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 9470078 - 9470146
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||| ||||  |||| | | ||||||||| |||||||| ||||||||| | |||||||    
T  9470078 gagaaatgctagcaatactcatttttcaacgctctctctaacactcactcttttattggatgaaatcaa 9470146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 30706449 - 30706405
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttt 303  Q
    |||||||||||||||||||| | ||||||||| | ||||||||||    
T  30706449 tgctagcaacactctcttttcaacactctctcaaacactcacttt 30706405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 37398993 - 37398929
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||| ||||||||| |||| |||||||||||||  ||||| | |||||||| || |||||||    
T  37398993 aatgctaacaacactctattttaagcactctctctaatactcaatcttttattgagtgaaatcaa 37398929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 9429729 - 9429568
Alignment:
Q  72 ttagggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttt 171  Q
    ||||| ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| || | |||||| ||||  |||||||||||||| ||||    
T  9429729 ttaggcaaatgttaacttgtgccctcaag-cacaagttaatgatttaaatatggaaataattcattgaaatgtgtgcattgcatttaatctttaattttt 9429631  T
Q  172 taatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgcc 231  Q
    |||||||||   || ||||| ||||| | |||||||||||||| ||| ||||||| |||||||    
T  9429630 taatcaattaaatgcataaaattttagaaaatatttcttctttcgggcttcttaatatgtgcc 9429568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 225
Target Start/End: Complemental strand, 17515489 - 17515337
Alignment:
Q  76 ggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaat 175  Q
    ||||||||||||||||| |||||||  |||  ||||||||| ||||||| ||||||||||| | ||| || | ||  |||||||||||||||||||||||    
T  17515489 ggaaatgttaacttgtgccctcaagatacaatttaatgattcaaatatgtaaataatttattgaaatatgtgtattgcatttaatctttaactttttaat 17515390  T
Q  176 caatt---tgaataaacttttatagaatatttcttcttttgggtttcttaaca 225  Q
    |||||   || | ||| ||||| ||||||||||||||||| ||||||||||||    
T  17515389 caattaaatgtacaaaattttagagaatatttcttcttttaggtttcttaaca 17515337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 35128907 - 35128838
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||| |||||||||||||||||||||| ||||||||||| || ||||| |||||||||||||||||||    
T  35128907 tgagaagtgctagcaacactctcttttgaacactctctctagcagtcactcttttattgggtaaaatcaa 35128838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 262 - 326
Target Start/End: Complemental strand, 10061036 - 10060972
Alignment:
Q  262 tagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| ||||    
T  10061036 tagcaacactctcttttgagcactctctctaacactcacttttttattgggtgagatcaatgtag 10060972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 19090207 - 19090267
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  19090207 atgaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgg 19090267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 3337656 - 3337764
Alignment:
Q  126 aaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttctta 222  Q
    ||||||||||| |||||||| ||||  ||||||||| ||||||||||||||||||   || ||||| ||||| |||||| ||||||||||   |||||||    
T  3337656 aaataatttattggaatgtgtgcattgcatttaatcgttaactttttaatcaattaaatgcataaaattttagagaataattcttcttttaaatttctta 3337755  T
Q  223 acatgtgcc 231  Q
    |||||||||    
T  3337756 acatgtgcc 3337764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 373400 - 373464
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||| ||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  373400 aatgctaacaacattcttttttgagcactctctctagcacccacttttttattgggtaaaatcaa 373464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 6531477 - 6531413
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||| |||||||    
T  6531477 aatgctagcaacactctcttttgaggactctctccagcactcactcttttattgggtgaaatcaa 6531413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 19090394 - 19090330
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||| ||||||||||| |||||||    
T  19090394 aatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaa 19090330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 180
Target Start/End: Complemental strand, 30323199 - 30323097
Alignment:
Q  78 aaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatca 177  Q
    |||||||||||||||||||  ||||||| |||||||  | |||||| |||||| ||||| |||||||  | ||  ||||||||||||||||||||||| |    
T  30323199 aaatgttaacttgtgtcctttaggcacatgttaatgcatcaaatatagaaatagtttattggaatgtatgtattacatttaatctttaactttttaatga 30323100  T
Q  178 att 180  Q
    |||    
T  30323099 att 30323097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 19737433 - 19737502
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||||||||||||| || |||||||| |||||||| ||||||||| | ||||||| ||||    
T  19737433 aatgctagcaacactctcttttgaacattctctctatcactcactcttttattggctcaaatcaatgtag 19737502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 32122792 - 32122860
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||| |||||||||||||| | |||||| || ||||||||||| |||||||| | |||||||    
T  32122792 gagaaatgctaacaacactctcttttcaacactctttccaccactcacttatttattggatgaaatcaa 32122860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 34905333 - 34905401
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||||  |||| | ||||||||||| |||||||| ||||||||| | |||||||    
T  34905333 gagaaatgctagcaacactcatttttcaacactctctctaacactcactcttttattggatgaaatcaa 34905401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 11842363 - 11842267
Alignment:
Q  138 ggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgcc 231  Q
    |||||||| ||||  |||||||||| |||||||| | | ||||   || | ||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  11842363 ggaatgtgtgcattgcatttaatctgtaacttttcagtgaattgaatgcacaaaattttagagaatatttcttcttttggatttcttaacatgtgcc 11842267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 286
Target Start/End: Complemental strand, 6992442 - 6992409
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactc 286  Q
    ||||||||||||||||||||||||||||||||||    
T  6992442 gagaaatgctagcaacactctcttttgagcactc 6992409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 4595928 - 4595892
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactct 287  Q
    ||||||||||||||||||||||||||||||| |||||    
T  4595928 atgagaaatgctagcaacactctcttttgagaactct 4595892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 35128725 - 35128790
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    ||||||| ||||||||||||||||||    |||||| |||||| ||||||||||||| ||||||| ||||    
T  35128725 aatgctaacaacactctcttttgagc----tctctaacactcatttttttattgggtgaaatcaatgtag 35128790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 5106308 - 5106363
Alignment:
Q  266 aacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||| ||||| | |||| |||||| |||||||||||||||||| |||||||||    
T  5106308 aacactcacttttcaacactttctctaacactcacttttttattggataaaatcaa 5106363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 9318811 - 9318854
Alignment:
Q  190 ttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||    
T  9318811 ttttagagaatatttcttcttttgaatttcttaacatgtgccct 9318854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 19737605 - 19737550
Alignment:
Q  266 aacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||| | |||||||||||||||||| |||||||| ||| ||||||| |||||||    
T  19737605 aacactttattttgagcactctctctagcactcactctttaattgggtgaaatcaa 19737550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 111
Target Start/End: Original strand, 35033488 - 35033523
Alignment:
Q  76 ggaaatgttaacttgtgtcctcaaggcacacgttaa 111  Q
    |||||||||||||||||||||||||||||| |||||    
T  35033488 ggaaatgttaacttgtgtcctcaaggcacatgttaa 35033523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 445813 - 445883
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||| ||||||||||| ||||  |||| | |||| |||||| |||||||||||||||||| | |||||||    
T  445813 atgaggaatgctagcaatactcatttttcaacactatctctagcactcacttttttattggatgaaatcaa 445883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 2359653 - 2359735
Alignment:
Q  98 aaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt 180  Q
    ||||||||  ||||||||| || ||| |||||||||||| | || ||| ||||  ||||||||| ||||||||||| ||||||    
T  2359653 aaggcacaaattaatgattcaagtatagaaataatttattgaaaagtgtgcattacatttaatcgttaactttttattcaatt 2359735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 4844463 - 4844543
Alignment:
Q  154 atttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgcc 231  Q
    ||||||| |||||||||||||| ||||   || | ||| ||||| | ||||||||||||||| ||||||||||||| ||||    
T  4844463 atttaatatttaactttttaataaattgaatgcacaaaattttaaaaaatatttcttcttttaggtttcttaacatatgcc 4844543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 34905516 - 34905454
Alignment:
Q  258 atgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    ||||||||||||||||||||||| ||| |||||||  ||||||| | ||||||| | ||||||    
T  34905516 atgctagcaacactctcttttgaacaccctctctaatactcactctcttattggtttaaatca 34905454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 13001693 - 13001754
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaat 318  Q
    |||||||| ||||||| ||||| ||||||||||||| || ||| ||||| ||||| ||||||    
T  13001693 aatgctagtaacactcacttttcagcactctctctaacattcattttttcattggataaaat 13001754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 21987471 - 21987410
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||||||| ||| ||||||||| |||||||||||  ||||||||| ||||||| | ||||||    
T  21987471 tgctagcaccaccctcttttgaacactctctctaatactcactttcttattggtttaaatca 21987410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 10060860 - 10060912
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttatt 309  Q
    |||||||||||||||||||||||| |||||| | || || ||||| |||||||    
T  10060860 aatgctagcaacactctcttttgaacactctttataacaatcactcttttatt 10060912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 73 - 231
Target Start/End: Original strand, 53287381 - 53287542
Alignment:
Q  73 tagggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaacttttt 172  Q
    |||||||||||||||||||| ||| ||| |||| |||||||||| |||||| ||||| |||||| |||||||| ||||  |||||||| | ||||||||     
T  53287381 tagggaaatgttaacttgtgcccttaagccacaagttaatgattcaaatatagaaatcatttattggaatgtgtgcattgcatttaatttgtaacttttc 53287480  T
Q  173 aatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgcc 231  Q
    ||| ||||   || | ||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  53287481 aatgaattgaatgcacaaaattttagagaatatttcttcttttggatttcttaacatgtgcc 53287542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 41519657 - 41519552
Alignment:
Q  75 gggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaa 174  Q
    |||||||| ||||||||| |||||||||||| ||||||||||  ||||| |||||||||||| | ||  || ||||  |||||||||||||| |||||||    
T  41519657 gggaaatgctaacttgtgccctcaaggcacaagttaatgattcgaatatagaaataatttattgaaaaatgtgcattgcatttaatctttaattttttaa 41519558  T
Q  175 tcaatt 180  Q
    ||||||    
T  41519557 tcaatt 41519552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 321
Target Start/End: Original strand, 27243047 - 27243110
Alignment:
Q  258 atgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||||||    
T  27243047 atgctagcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaa 27243110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 326
Target Start/End: Original strand, 24748913 - 24748977
Alignment:
Q  262 tagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||||| ||||    
T  24748913 tagcaacactctcttttgagcactctctctaacactcactcttttattggatgaaatcaatgtag 24748977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 233
Target Start/End: Original strand, 28554132 - 28554293
Alignment:
Q  75 gggaaatgttaacttgtgtcctcaa-ggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaacttttta 173  Q
    |||||||||||||||||||||| || ||||||  ||||||||| |||||| |||||||||||| | |||||| | ||   ||||||| |||||||||||     
T  28554132 gggaaatgttaacttgtgtccttaagggcacagattaatgattcaaatatagaaataatttattgaaatgtgtgtattgtatttaat-tttaactttttg 28554230  T
Q  174 atcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    |||||||   || | ||| ||||| | ||||||||||||||| |   ||||||||||||||||    
T  28554231 atcaattaaatgcacaaaattttaaaaaatatttcttcttttagaagtcttaacatgtgccct 28554293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 326
Target Start/End: Original strand, 29775134 - 29775207
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||  |||| ||||||||||| ||||||| ||||    
T  29775134 atgaggaatgctagcaacactctcttttgagcactctctctagca--cactcttttattgggtgaaatcaaggtag 29775207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 37600122 - 37600182
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||| |||| |||||||||    
T  37600122 atgaggaatgctagcaacactctcttttgagcactctctctagcacccactcttttattgg 37600182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 37600309 - 37600245
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||| ||||||||||| |||||||    
T  37600309 aatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaa 37600245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 38928007 - 38928071
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||||||| |||| |||||| |||||||| ||||||||||| |||||||    
T  38928007 aatgctagcaacactctcttttgatcactttctctaacactcactcttttattgggtgaaatcaa 38928071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 21232708 - 21232637
Alignment:
Q  250 aatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||| |||||||||||||| |||||||||||||| ||| || |||||| ||||||||||||| |||||||    
T  21232708 aatgaggaatgctagcaacaccctcttttgagcactttctttagcactcatttttttattgggtgaaatcaa 21232637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 46237232 - 46237161
Alignment:
Q  250 aatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||| || ||||||||||||||||||||||||||||||| || ||||| ||||||||| | |||||||    
T  46237232 aatgagaagtgttagcaacactctcttttgagcactctctctagcaatcactcttttattggatgaaatcaa 46237161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 10769909 - 10769840
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| |||||||||||||||||||||||||||||||||||| |||  ||| ||||||| ||| |||||||    
T  10769909 tgaggaatgctagcaacactctcttttgagcactctctctatcaccgactcttttatttggtgaaatcaa 10769840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 54140891 - 54140960
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||  |||||||| | ||||||| ||||    
T  54140891 aatgctagcaacactctcttttgagcactttctctagcactcactcatttattggatgaaatcaatgtag 54140960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 233
Target Start/End: Complemental strand, 12790012 - 12789870
Alignment:
Q  94 cctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatttga---ataaact 190  Q
    |||||||||||| ||||| |||| | |||  |||||||||| | | |||| |  |||  ||||||||||||||||||||||| ||||  |   ||||| |    
T  12790012 cctcaaggcacaagttaacgattcatataaagaaataattttttgaaatgcgtacattacatttaatctttaactttttaataaattgaatacataaaat 12789913  T
Q  191 tttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    |||| | ||||||| |||||||| |||||||||||||||||||    
T  12789912 tttagaaaatatttattcttttgagtttcttaacatgtgccct 12789870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 54141076 - 54141008
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||| || ||||||| |||||||||||||||||||| ||||||||  |||||||||| |||||||    
T  54141076 gagaaatgttaacaacactttcttttgagcactctctctagcactcactcatttattgggtgaaatcaa 54141008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 20379017 - 20379146
Alignment:
Q  102 cacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttataga 198  Q
    |||| |||||||||| |||||| ||||||| ||||  ||||||| |||| | ||||| |||||||||||| |||  |||   || | ||| ||||| |||    
T  20379017 cacaagttaatgattcaaatatagaaataaattattagaatgtgtgcattttatttagtctttaacttttaaatgcattgaatgcacaaaattttagaga 20379116  T
Q  199 atatttcttcttttgggtttcttaacatgt 228  Q
    | ||||||||||||| ||||||||||||||    
T  20379117 acatttcttcttttgagtttcttaacatgt 20379146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 52123955 - 52124018
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||| ||||||| | ||||||    
T  52123955 aatgctagcaacactctcttttgaacactctctctaatactcactttcttattggtttaaatca 52124018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 28529248 - 28529318
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||| |||||||||||||||| ||||| | ||||||||||| |||||||| ||||||||| | |||||||    
T  28529248 atgaggaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaa 28529318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 230
Target Start/End: Complemental strand, 42791218 - 42791065
Alignment:
Q  78 aaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatca 177  Q
    |||||||||||| || ||| |||||||| |||||||  |  |||||  || |||||||| |||||||| ||||  |||||||| ||||| |||||||| |    
T  42791218 aaatgttaacttttgcccttaaggcacaagttaatgcatcgaatataaaagtaatttatgggaatgtgtgcattacatttaat-tttaagtttttaatga 42791120  T
Q  178 atttgaataaact---tttatagaatatttcttcttttgggtttcttaacatgtgc 230  Q
    ||| ||||  ||    |||| ||||||||||||||||| |||||||||||||||||    
T  42791119 att-gaatgcacaaaatttagagaatatttcttctttttggtttcttaacatgtgc 42791065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 230
Target Start/End: Original strand, 30732758 - 30732914
Alignment:
Q  77 gaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatc 176  Q
    |||||| ||||||||  ||| |||  ||| |||||| ||| || |||  ||||||||| | |||||||  ||||   ||||||| ||||||||||||||     
T  30732758 gaaatgctaacttgtacccttaagatacaagttaataattcaagtataaaaataatttgttggaatgtatgcattgtatttaatatttaactttttaatg 30732857  T
Q  177 aatttgaat----aaacttttatagaatatttcttcttttgggtttcttaacatgtgc 230  Q
    |||| ||||    ||| ||||| | |||||||||||||||||||||||||||||||||    
T  30732858 aatt-gaatttacaaaattttaaaaaatatttcttcttttgggtttcttaacatgtgc 30732914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 24734886 - 24734823
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||||||||||||||||||||||| |||||||||||  ||||||| | ||||||| | ||||||    
T  24734886 aatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatca 24734823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 175
Target Start/End: Complemental strand, 39990856 - 39990757
Alignment:
Q  76 ggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaat 175  Q
    ||||||| ||||||||| ||||||| |||| |||||||| | ||| ||| ||||||||||| | |||||| | ||  |||||||| || |||||||||||    
T  39990856 ggaaatgctaacttgtgccctcaagacacaagttaatgaatcaaagatgaaaataatttattgaaatgtgtgaattacatttaatattaaactttttaat 39990757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 41451894 - 41451957
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||||||||||||||||||||||| |||||||||||  ||||||| | ||||||| | ||||||    
T  41451894 aatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatca 41451957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 44844175 - 44844100
Alignment:
Q  245 aaattaatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||||| |||| |||| |||||| ||||||||||   ||||||||||| |||||||||||||||||| | ||||||    
T  44844175 aaattattgagtaatgatagcaagactctctttttgacactctctctaacactcacttttttattggattaaatca 44844100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 24657351 - 24657281
Alignment:
Q  110 aatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt 180  Q
    ||||||| |||||| ||||| |||||| |||||||| ||||   |||||||||||||||||||||| ||||    
T  24657351 aatgattcaaatatagaaattatttattggaatgtgtgcattatatttaatctttaactttttaataaatt 24657281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 229
Target Start/End: Complemental strand, 49447715 - 49447561
Alignment:
Q  78 aaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatca 177  Q
    ||||||||||| ||| | | ||| ||||  ||||||||| ||||||  |||||| |||| |||||||| |||| | ||||| |||||||||||| |||      
T  49447715 aaatgttaactcgtgcctttaagacacaaattaatgattcaaatataaaaataaattattggaatgtgtgcattttatttagtctttaacttttaaatgc 49447616  T
Q  178 atttgaataaac----ttttatagaatatttcttcttttgggtttcttaacatgtg 229  Q
    | ||||||| ||    ||||| |||| |||| |||||||| |||||||||||||||    
T  49447615 a-ttgaatacacaatattttaaagaacattttttcttttgagtttcttaacatgtg 49447561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 10769723 - 10769792
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||  ||||||||||||||||||||||||||| |||| ||| ||||||| | | ||||||| ||||    
T  10769723 aatgctaataacactctcttttgagcactctctctagcacttactcttttatttgatgaaatcaatgtag 10769792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 20791475 - 20791414
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||||||| ||||||||||||| |||||||||||  ||||||||| ||||||| | ||||||    
T  20791475 tgctagcaccactctcttttgaacactctctctaatactcactttcttattggtttaaatca 20791414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 13809079 - 13809146
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||||||||||   ||||||||||| |  ||||| ||||||||| |||||||||    
T  13809079 gagaaatgctagcaacactctcttttacacactctctctaac-ttcactcttttattggataaaatcaa 13809146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 14236198 - 14236146
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    ||||||||||||||| |||||| |||||| ||||  |||||||||||||||||    
T  14236198 tgctagcaacactctgttttgaacactctttctaatactcacttttttattgg 14236146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 20493624 - 20493560
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||| ||||| | ||||||||||| ||||||||  |||||||| | |||||||    
T  20493624 aatgctagcaacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaa 20493560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 29389192 - 29389128
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||| ||||||||||||| || || |||||||| ||| ||||  |||||||||    
T  29389192 aatgctagcaacactcacttttgagcactcactttaacactcactctttcattgaataaaatcaa 29389128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 38928188 - 38928124
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||| ||||||| ||||| ||||||  | ||| | |||||||||||||||||||    
T  38928188 aatgctagcaacactatcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaa 38928124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 308
Target Start/End: Complemental strand, 40716050 - 40715990
Alignment:
Q  248 ttaatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttat 308  Q
    |||| |||||||| ||||||||||| ||||| | ||||||||||| |||||||| ||||||    
T  40716050 ttaacgagaaatgttagcaacactcacttttcaacactctctctagcactcactcttttat 40715990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 50661705 - 50661637
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| |||| |||||||||||||||| | ||||||||||| |||| ||| ||||||| | |||||||||    
T  50661705 gagagatgcaagcaacactctcttttaaacactctctctaacacttactcttttattagataaaatcaa 50661637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 5452056 - 5452094
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctc 290  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  5452056 tgagtaatgctagcaacactctcttttgaacactctctc 5452094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 27243225 - 27243163
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||||| |||||| ||||  ||||||| | | ||||||| |||||||    
T  27243225 tgctagcaacactctcttttgaacactctttctaatactcactctctcattgggttaaatcaa 27243163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 30624634 - 30624685
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattg 310  Q
    |||||||||||||||| ||||||||||  ||||||| |||||||| ||||||||    
T  30624634 aatgctagcaacactcacttttgagca--ctctctaacactcactcttttattg 30624685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 301
Target Start/End: Complemental strand, 52951537 - 52951495
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcact 301  Q
    |||||||||||||||||||| | ||||||||||| ||||||||    
T  52951537 tgctagcaacactctctttttaacactctctctagcactcact 52951495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 46160950 - 46161012
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||| |||||||  || ||||||| |||||||| ||||||||| | |||||||    
T  46160950 aatgctagcaacactcacttttga--acactctctagcactcactcttttattggatgaaatcaa 46161012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 5452239 - 5452175
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||| ||||| | |||||||| || || ||||| ||||||||| | |||||||    
T  5452239 aatgctagcaacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaa 5452175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 41707622 - 41707554
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||  ||| |||| || ||||||||||||||||||| |||||||| | | ||||| |||||||||    
T  41707622 gagaaataatagtaacattcacttttgagcactctctctaacactcactctctcattggataaaatcaa 41707554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 48543134 - 48543186
Alignment:
Q  249 taatgagaaatgctagcaacactctcttttgagcactctctctaccactcact 301  Q
    |||||||||||||||  ||||||||||||  ||||||| ||||| ||||||||    
T  48543134 taatgagaaatgctaagaacactctctttctagcactcactctaacactcact 48543186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 50320597 - 50320541
Alignment:
Q  254 agaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattg 310  Q
    ||||||||||| |||||| |||||  ||||||||||||| |||||||| || |||||    
T  50320597 agaaatgctaggaacactttctttctagcactctctctaacactcactcttctattg 50320541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 54362011 - 54362051
Alignment:
Q  74 agggaaatgttaacttgtgtcctcaaggcacacgttaatga 114  Q
    ||||||||||||||||||| ||| |||||||| ||||||||    
T  54362011 agggaaatgttaacttgtgcccttaaggcacaagttaatga 54362051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 77 - 229
Target Start/End: Original strand, 25983031 - 25983186
Alignment:
Q  77 gaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatc 176  Q
    |||||| ||||||||||||||||| || | ||||||||||||||||| |||||||||||| ||||| || ||||  ||||||||||||||||||| ||      
T  25983031 gaaatgctaacttgtgtcctcaagacataagttaatgatttaaatatagaaataatttattggaatatgtgcattgcatttaatctttaacttttcaaaa 25983130  T
Q  177 aatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtg 229  Q
    ||||   || | ||| ||||| ||||||||| ||||||| ||||||||||||||||    
T  25983131 aattgaatgcacaaaattttagagaatatttattcttttaggtttcttaacatgtg 25983186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 251 - 326
Target Start/End: Complemental strand, 34818374 - 34818299
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||    
T  34818374 atgagaaatgctaggaacattctcttttgagcactctctctaacactcacttttttatttggtaaaatcaatgtag 34818299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 74 - 226
Target Start/End: Original strand, 19961519 - 19961674
Alignment:
Q  74 agggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaacttttta 173  Q
    ||||||||||||| ||||||||| | | |||| |||||||| | |||  | |||||| ||||| |||||||| | || ||||||||||||||| ||||||    
T  19961519 agggaaatgttaatttgtgtccttatgacacaagttaatgaatcaaaagtagaaatagtttattggaatgtgtgtatttcatttaatctttaatttttta 19961618  T
Q  174 atcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacat 226  Q
    || ||||   || | ||| ||||| ||||||||||||||||||| |||||||||||    
T  19961619 ataaattgaatgcacaaaattttaaagaatatttcttcttttggatttcttaacat 19961674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 32050489 - 32050425
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||    
T  32050489 aatgctagcaacactctcttttgagcattctctctagcactcacttttttattgggtgaaatcaa 32050425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 42224775 - 42224706
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||    
T  42224775 tgaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaa 42224706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 74 - 229
Target Start/End: Original strand, 36527392 - 36527549
Alignment:
Q  74 agggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaacttttta 173  Q
    ||||||||||||| ||||| ||| | |||||| |||||||  | |||||| |||||| ||||| ||| |||| ||||  ||||||||||||||||||| |    
T  36527392 agggaaatgttaagttgtgccctgagggcacaagttaatgtatcaaatatagaaatagtttattggagtgtgtgcattgcatttaatctttaactttt-a 36527490  T
Q  174 atcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtg 229  Q
    || ||||   || | ||| ||||| ||||||||| ||||||||| ||||||||||||||    
T  36527491 ataaattgaatgcacaaaattttagagaatatttattcttttggatttcttaacatgtg 36527549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 215
Target Start/End: Original strand, 3938367 - 3938516
Alignment:
Q  69 aaattagggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaact 168  Q
    ||||| ||||||| |||| |||||  || ||| |||| ||||||||||||||||| |||||||||||| |||||||  ||||  |||||||| | ||| |    
T  3938367 aaatttgggaaatattaatttgtgctcttaagacacaagttaatgatttaaatatagaaataatttattggaatgtatgcattgcatttaatatctaatt 3938466  T
Q  169 ttttaatcaatt---tgaataaacttttatagaatatttcttcttttggg 215  Q
    ||||||| ||||   || ||||| ||||| | ||||||||||||||||||    
T  3938467 ttttaatgaattgaatgcataaaattttaaaaaatatttcttcttttggg 3938516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 40971639 - 40971568
Alignment:
Q  250 aatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||| ||||||| |||||||||||||||||||||||||||| |||||||| |||||||| || |||||||    
T  40971639 aatgaggaatgctaacaacactctcttttgagcactctctctagcactcactcttttattgagtgaaatcaa 40971568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 26072291 - 26072229
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggt 313  Q
    ||||| ||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  26072291 atgaggaatgctagcaacactctcttttgagcattctctctagcactcactcttttattgggt 26072229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 321
Target Start/End: Original strand, 40971453 - 40971515
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||||| |||||| |||| |||||||| |||||||||||||||||||    
T  40971453 tgctagcaacactctcttttgaacactctatctaacactcactattttattgggtaaaatcaa 40971515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 42224589 - 42224658
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    ||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||| ||||||| ||||    
T  42224589 aatgctagcaacactctcttttgagaactctctccagcactcactcttttattgggtgaaatcaatgtag 42224658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 4959279 - 4959343
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||||||||||||||||||||  || |||| ||||||||||| |||||||    
T  4959279 aatgctagcaacactctcttttgagcactctctctaatacccactcttttattgggtgaaatcaa 4959343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 6263884 - 6263948
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| ||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  6263884 aatgttagtaacactctcttttgagcactctctctatcactcactcctttattgggtaaaatcaa 6263948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 177
Target Start/End: Complemental strand, 18334548 - 18334444
Alignment:
Q  73 tagggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaacttttt 172  Q
    |||||||||||||||||||| ||| | |||||| |||||||||| |||||| |||| || ||||  ||||||| ||||  |||||||| || ||||||||    
T  18334548 tagggaaatgttaacttgtgccctgagggcacaagttaatgattcaaatatagaaaaaacttatttgaatgtgtgcattgcatttaatattaaacttttt 18334449  T
Q  173 aatca 177  Q
    |||||    
T  18334448 aatca 18334444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 77 - 180
Target Start/End: Complemental strand, 13951255 - 13951152
Alignment:
Q  77 gaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatc 176  Q
    ||||||||||||| || ||||||| ||||  ||||||||| ||||||  ||||||||||| ||||  || ||||  | ||||||||||||||||||||||    
T  13951255 gaaatgttaacttttggcctcaagacacaaattaatgattcaaatataaaaataatttattggaaaatgtgcattgcgtttaatctttaactttttaatc 13951156  T
Q  177 aatt 180  Q
    ||||    
T  13951155 aatt 13951152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 4959458 - 4959396
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||| ||||||||||||||||||||||||||| |||||||| ||||||||||  |||||||    
T  4959458 tgctagtaacactctcttttgagcactctctctagcactcactcttttattgggggaaatcaa 4959396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 14622584 - 14622453
Alignment:
Q  102 cacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttataga 198  Q
    |||| |||||||||| |||||| |||||||||||| |||| ||| |||| ||||| ||| ||||||||| |||| ||||   |||| ||| ||||| | |    
T  14622584 cacaagttaatgattcaaatatagaaataatttattggaaggtgtgcatttcattcaatatttaactttctaataaattggatgaacaaaattttagaaa 14622485  T
Q  199 atatttcttcttttgggtttcttaacatgtgcc 231  Q
    |||||| ||||||| |||| |||||||||||||    
T  14622484 atattttttctttt-ggttccttaacatgtgcc 14622453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 28611773 - 28611830
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattg 310  Q
    |||||||||||||||||||||||||||||||||||||||| |||  ||| ||||||||    
T  28611773 gagaaatgctagcaacactctcttttgagcactctctctaacaccaactcttttattg 28611830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 31542426 - 31542361
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaat 318  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||| || |||||||||| ||||    
T  31542426 gagaaatgctagcaaaactatcttttgagcactctctctaacactcatttatttattgggtgaaat 31542361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 6264061 - 6263999
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||| |||||||| |||| |||||||| ||||| ||||| |||||||    
T  6264061 tgctagcaacactctcttttaagcactctatctagcactcactcttttagtgggtgaaatcaa 6263999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 8233975 - 8234127
Alignment:
Q  79 aatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaa 178  Q
    |||||||||||||| ||| ||| ||||  ||||| ||| |||||  |||||||||||| ||| |||| ||||   ||||||||||||||||||  || |     
T  8233975 aatgttaacttgtgcccttaagacacaaattaataattcaaataaagaaataatttattggattgtgtgcattaaatttaatctttaacttttcgatgat 8234074  T
Q  179 tt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgt 228  Q
    ||   || | ||| ||| | |||||||||||||||||| ||||||||||||||    
T  8234075 ttaaatgcacaaaatttaagagaatatttcttcttttgagtttcttaacatgt 8234127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 228
Target Start/End: Complemental strand, 14576086 - 14575930
Alignment:
Q  75 gggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaa 174  Q
    |||||||||||| ||||| ||| ||| || | |||||| | | |||||| |||||| ||||||| |||||| ||||  |||| ||| |||||||||||||    
T  14576086 gggaaatgttaatttgtgcccttaagacataagttaataagtaaaatatagaaatagtttatcgaaatgtgtgcattacattgaatatttaactttttaa 14575987  T
Q  175 tcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgt 228  Q
    | ||||   || | ||| |||||   ||||||| |||||||| ||||||||||||||    
T  14575986 tgaattgaatgcacaaaattttagtaaatattttttcttttgagtttcttaacatgt 14575930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 311
Target Start/End: Original strand, 17568700 - 17568754
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    |||||||||||||||||||||||||||||||| ||| ||| |||| |||||||||    
T  17568700 aatgctagcaacactctcttttgagcactctccctagcacccactcttttattgg 17568754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 14310038 - 14309957
Alignment:
Q  99 aggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt 180  Q
    ||||||| |||||||||| |||||| ||||||||| || ||||| ||  |||  ||||||| ||||||||||||||||||||    
T  14310038 aggcacaagttaatgattcaaatatagaaataattgattggaatatgtacattgcatttaaactttaactttttaatcaatt 14309957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 42958627 - 42958566
Alignment:
Q  250 aatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    ||||||||||||||| ||||||||||||  ||||||| ||||| ||||||||||| ||||||    
T  42958627 aatgagaaatgctaggaacactctctttctagcactcactctaacactcacttttctattgg 42958566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 40926232 - 40926184
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactca 299  Q
    ||||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  40926232 atgagaaatgctaacaacactttcttttgagcactctctctaacactca 40926184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 177
Target Start/End: Complemental strand, 730881 - 730782
Alignment:
Q  78 aaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatca 177  Q
    ||||| |||| |||||| | | ||||||  ||||||||| |||||| ||||||||||||  ||||||| | ||  ||||||||||| |||||||||||||    
T  730881 aaatgctaacgtgtgtcttgagggcacaaattaatgattcaaatatagaaataatttattagaatgtgtgtattacatttaatcttgaactttttaatca 730782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 34368541 - 34368478
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||||||||||||||||||||||||||||||||||  ||| |||| | ||||||| | ||||||    
T  34368541 aatgctagcaacactctcttttgagcactctctctgtcacccactctcttattggtttaaatca 34368478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 326
Target Start/End: Complemental strand, 24915231 - 24915168
Alignment:
Q  261 ctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||||||| ||||||||||  | |||||||| ||||||||||| ||||||| ||||    
T  24915231 ctagcaacactctcttttaagcactctct--agcactcactcttttattgggtgaaatcaatgtag 24915168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 326
Target Start/End: Complemental strand, 24991062 - 24990999
Alignment:
Q  261 ctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||||||| ||||||||||  | |||||||| ||||||||||| ||||||| ||||    
T  24991062 ctagcaacactctcttttaagcactctct--agcactcactcttttattgggtgaaatcaatgtag 24990999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 7406301 - 7406222
Alignment:
Q  153 catttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtg 229  Q
    ||||||||||||| ||||||||| | ||   || ||||| ||||||| |||||||||||||||  |||||||||||||||    
T  7406301 catttaatctttagctttttaatgagttgaatgcataaaattttataaaatatttcttcttttatgtttcttaacatgtg 7406222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 8912704 - 8912628
Alignment:
Q  247 attaatgagaaatgctagcaacactctcttttgag--cactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| |||| |||| |||||||| |||||||||||  ||||||||||| |||||||| ||||||| ||| |||||||    
T  8912704 attagtgaggaatgttagcaacagtctcttttgagcacactctctctatcactcactcttttattaggtgaaatcaa 8912628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 2443687 - 2443739
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttatt 309  Q
    ||||||||||||||||||||||||||||||| ||||  |||| || |||||||    
T  2443687 aatgctagcaacactctcttttgagcactctgtctagaactcgctcttttatt 2443739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 8912508 - 8912572
Alignment:
Q  254 agaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaat 318  Q
    ||||||||||||||| ||||||||| | |||| | |||| |||||||| ||||||| ||||||||    
T  8912508 agaaatgctagcaacgctctcttttaaacactttttctagcactcactcttttatttggtaaaat 8912572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 26072100 - 26072168
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||| ||||| ||||||||||||||||||||||| ||||  ||||| | |||| |||||| |||||||    
T  26072100 gagaagtgctaacaacactctcttttgagcactctttctaatactcattctttttttgggtgaaatcaa 26072168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 30892293 - 30892245
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcact 301  Q
    |||||||||||| ||||||||||||  ||||||||||||| ||||||||    
T  30892293 gagaaatgctaggaacactctctttctagcactctctctaacactcact 30892245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 39246609 - 39246673
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||| || ||||||||||  ||||||| || ||||||| ||||||| |||||||||    
T  39246609 aatgctagcaacaatcacttttgagcatcctctctaacaatcactttcttattggataaaatcaa 39246673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 42179863 - 42179786
Alignment:
Q  156 ttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgcc 231  Q
    |||||||||||||||||||| ||||   || ||||| ||| | ||||||||| ||||||| ||||||||||||||||||    
T  42179863 ttaatctttaactttttaattaattaaatgcataaaattt-agagaatattttttcttttaggtttcttaacatgtgcc 42179786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 17190603 - 17190654
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttt 303  Q
    ||||||||||||  ||||||||||||  ||||||||||||| ||||||||||    
T  17190603 tgagaaatgctatgaacactctctttctagcactctctctaacactcacttt 17190654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 292
Target Start/End: Original strand, 41105569 - 41105604
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctcta 292  Q
    ||||| ||||||||||||||||||||||||||||||    
T  41105569 aatgcgagcaacactctcttttgagcactctctcta 41105604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 28611957 - 28611903
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    ||||||| |||||||| ||||||||||||||||||| || ||||| ||| |||||    
T  28611957 aatgctaacaacactcacttttgagcactctctctaacattcactctttcattgg 28611903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 2201589 - 2201650
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||||| ||||||||||||| | |||||||| || ||| |||| | ||||||||||||||||    
T  2201589 tgctaggaacactctcttttcaacactctctttagcacccactctcttattgggtaaaatca 2201650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 326
Target Start/End: Original strand, 13456170 - 13456232
Alignment:
Q  262 tagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||||||||| |  ||||||| |||||||| ||||||| ||| ||||||| ||||    
T  13456170 tagcaacactctcttttgagta--ctctctagcactcactcttttattaggtgaaatcaatgtag 13456232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 30325883 - 30325936
Alignment:
Q  267 acactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||||||||||||| |||||||||||  ||||||||| ||||||| | ||||||    
T  30325883 acactctcttttgaacactctctctaatactcactttcttattggtttaaatca 30325936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 30721368 - 30721465
Alignment:
Q  78 aaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaat 175  Q
    ||||||||||||||||| | ||||||||   ||||||   |||||| |||||| ||||| | |||||| ||||  |||||||| ||||| ||||||||    
T  30721368 aaatgttaacttgtgtctttaaggcacaaactaatgaaacaaatatagaaatagtttattgaaatgtgtgcattacatttaatttttaattttttaat 30721465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 1860266 - 1860158
Alignment:
Q  126 aaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatttgaat----aaacttttatagaatatttcttcttttgggtttctt 221  Q
    ||||||||||| | |||||| ||||  |||||||||| | | |||||||||||||| |||    ||| ||||| ||||||||| ||||||| | ||||||    
T  1860266 aaataatttattgaaatgtgtgcattacatttaatctctcattttttaatcaattttaatgcacaaaattttagagaatattttttctttt-gatttctt 1860168  T
Q  222 aacatgtgcc 231  Q
    ||||| ||||    
T  1860167 aacatatgcc 1860158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 5990514 - 5990562
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcact 301  Q
    |||||||||||  ||| ||||||||| ||||||||||||| ||||||||    
T  5990514 gagaaatgctaagaacgctctctttttagcactctctctaacactcact 5990562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 28490727 - 28490775
Alignment:
Q  263 agcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    |||||||||||||||||| |||||||||||  ||||||| | |||||||    
T  28490727 agcaacactctcttttgaacactctctctaatactcactctcttattgg 28490775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 28490901 - 28490837
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||| || ||||| |  |||||||||| || ||||||||||||||| | |||||||    
T  28490901 aatgctagcaacagtcacttttcaaaactctctctagcattcacttttttattggatgaaatcaa 28490837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 30326053 - 30325989
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||| || ||||||  |||||||| || |||||||| ||||||||| | |||||||    
T  30326053 aatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaa 30325989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 229
Target Start/End: Complemental strand, 40298414 - 40298260
Alignment:
Q  78 aaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatca 177  Q
    ||||||||| |||||  || |||  ||| |||||| | ||||||||  |||||||||||  |||||||  |||  ||||||||||||||| ||||||| |    
T  40298414 aaatgttaatttgtgctcttaagatacaagttaataagttaaatataaaaataatttattagaatgtgtacattacatttaatctttaacattttaatga 40298315  T
Q  178 att---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtg 229  Q
    |||   || | ||| ||||| | ||||||| |||||||   ||||||||||||||    
T  40298314 attgaatgcacaaaattttagaaaatatttattcttttaaatttcttaacatgtg 40298260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 42011341 - 42011377
Alignment:
Q  190 ttttatagaatatttcttcttttgggtttcttaacat 226  Q
    |||||||||||| |||||||||||| |||||||||||    
T  42011341 ttttatagaatacttcttcttttggatttcttaacat 42011377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 6e-28; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 233
Target Start/End: Complemental strand, 55323099 - 55322942
Alignment:
Q  79 aatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaa 178  Q
    |||| ||||||||| ||| |||||||| |||| ||| | |||||| |||||||||||| ||||| || ||||  ||||||||||||||||||||||| ||    
T  55323099 aatgctaacttgtgcccttaaggcacaagttagtgaatcaaatatagaaataatttattggaatttgtgcattacatttaatctttaactttttaatgaa 55323000  T
Q  179 tt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    ||   || | ||| ||||| | |||||||||||||| |||||||||||||||||||||    
T  55322999 ttgaatgcacaaaattttaaaaaatatttcttctttggggtttcttaacatgtgccct 55322942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 233
Target Start/End: Complemental strand, 50328537 - 50328373
Alignment:
Q  72 ttagggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttt 171  Q
    ||||| ||||||||||||||||||| |||| ||| |||||||| | | |||| ||||||   ||| |||||||| ||||  |||||||||||||||||||    
T  50328537 ttaggaaaatgttaacttgtgtccttaaggtacaagttaatgaatcagatatagaaataggatattggaatgtgtgcattacatttaatctttaactttt 50328438  T
Q  172 taatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    |||| ||||   || | ||| ||||| |||||||||||| ||| |||||||||||||||||||||    
T  50328437 taatgaattggatgcacaaaattttagagaatatttcttttttggggtttcttaacatgtgccct 50328373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 233
Target Start/End: Original strand, 53133437 - 53133608
Alignment:
Q  65 ttataaattagggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatcttt 164  Q
    ||||| || ||||||||||||||||||| ||| |||||||| ||||||||   |||||| ||||||| | || ||||| || ||||  ||||||||||||    
T  53133437 ttatatataagggaaatgttaacttgtgcccttaaggcacaagttaatgaaacaaatatagaaataactcattggaatatgtgcattacatttaatcttt 53133536  T
Q  165 aactttttaatcaatttgaat----aaacttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    || ||||||||  | ||||||    ||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  53133537 aaatttttaat-gagttgaatgcgcaaaattttataaaatatttcttcttttaggtttcttaacatgtgccct 53133608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 230
Target Start/End: Original strand, 46393116 - 46393280
Alignment:
Q  69 aaattagggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaact 168  Q
    |||||||||||||||||||||||||||| |||||| | |||||||  |||||  | |||||| |||||  ||||||| |||| |||||| || |||| ||    
T  46393116 aaattagggaaatgttaacttgtgtccttaaggcataagttaatgtattaaaagtagaaatagtttattagaatgtgtgcatttcatttcatttttacct 46393215  T
Q  169 ttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgc 230  Q
    ||||||| ||||   || | | | ||||| ||||||||| ||||||||| |||||||||||||||    
T  46393216 ttttaatgaattgaatgcacacaattttagagaatatttattcttttggttttcttaacatgtgc 46393280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 74 - 231
Target Start/End: Original strand, 26740737 - 26740897
Alignment:
Q  74 agggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaacttttta 173  Q
    |||||||||||||||||||  || ||| ||||||||||||| | ||||||  ||||| ||||| ||||| || | ||  ||| |||||||||||||||||    
T  26740737 agggaaatgttaacttgtgctcttaagacacacgttaatgaatcaaatataaaaatattttattggaatatgtgtattacatgtaatctttaacttttta 26740836  T
Q  174 atcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgcc 231  Q
    || ||||   || | ||| ||||| ||||||||||||||||||  ||||||| ||||||||    
T  26740837 atgaattgaatgcacaaaattttagagaatatttcttcttttgaatttcttagcatgtgcc 26740897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 76 - 233
Target Start/End: Complemental strand, 34119061 - 34118901
Alignment:
Q  76 ggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaat 175  Q
    ||||||||||| ||||| ||||||| |||| |||||||||| |||||| ||||   ||||| | ||| || ||||  |||| ||| ||||||||||||||    
T  34119061 ggaaatgttaatttgtgccctcaagacacaagttaatgattcaaatatagaaaatttttattgaaatatgtgcattgcattcaatatttaactttttaat 34118962  T
Q  176 caatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    || ||   || | ||| |||||||||||||||  |||||| ||||||||||||||||||||    
T  34118961 catttaaatgcacaaaattttatagaatatttactcttttaggtttcttaacatgtgccct 34118901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 44832645 - 44832576
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||||||||||||||||||||||| | |||||| ||||||||||||| ||||||| ||||    
T  44832645 aatgctagcaacactctcttttgagcactctctccagcactcatttttttattgggtgaaatcaatgtag 44832576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 261 - 326
Target Start/End: Complemental strand, 51206221 - 51206156
Alignment:
Q  261 ctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  51206221 ctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtag 51206156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 8108951 - 8109021
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||||| ||||| | ||||||||||| |||||||| ||||||||||| |||||||    
T  8108951 atgagaaatgctagcaacactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaa 8109021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 17340333 - 17340457
Alignment:
Q  112 tgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaat---ttgaataaacttttatagaatatttcttc 208  Q
    ||||| ||||||| ||||| ||||| |||||||| ||||  ||||||||||||||||||||||| |||   ||| ||||| ||||| |||||  || |||    
T  17340333 tgattaaaatatgaaaatagtttattggaatgtgtgcattacatttaatctttaactttttaataaattgattgcataaaattttagagaatgctttttc 17340432  T
Q  209 ttttgggtttcttaacatgtgccct 233  Q
    |||| | ||||||||||||||||||    
T  17340433 ttttagatttcttaacatgtgccct 17340457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 252 - 306
Target Start/End: Original strand, 37315559 - 37315613
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcactttttt 306  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  37315559 tgagaaatgctagcaacactctcttttgagcactctctctaacactcactctttt 37315613  T

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Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 253 - 326
Target Start/End: Complemental strand, 39016849 - 39016776
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||| ||||||||||||||||||| ||||||||||| |||| ||| ||||||| ||||||||||| ||||    
T  39016849 gagaaatgttagcaacactctcttttgaacactctctctagcacttactcttttattaggtaaaatcaatgtag 39016776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 42862419 - 42862483
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||||||||||||| | |||| |||||||| ||||||||||| |||||||    
T  42862419 aatgctagcaacactctcttttgagcactatatctagcactcactcttttattgggtgaaatcaa 42862483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 42862600 - 42862536
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||  |||||||||||||||||||| |||||| |||||||||||||||||||| |||||||    
T  42862600 aatgctaataacactctcttttgagcactttctctagcactcacttttttattgggtgaaatcaa 42862536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 321
Target Start/End: Original strand, 40812039 - 40812102
Alignment:
Q  258 atgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||| |||||| ||||||||||| |||||||| ||||||||||| |||||||    
T  40812039 atgctagcaacactcttttttgaacactctctctagcactcactcttttattgggtgaaatcaa 40812102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 2187812 - 2187865
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattg 310  Q
    |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||    
T  2187812 aatgctagcaacactcgcttttgagcactctctctaacactcatttttttattg 2187865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 37315742 - 37315673
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    ||||||||||||||||| ||||||||||||||  || |||||||| ||||||||||| ||||||| ||||    
T  37315742 aatgctagcaacactcttttttgagcactctcattagcactcactcttttattgggtgaaatcaatgtag 37315673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 47388520 - 47388603
Alignment:
Q  153 catttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    ||||||||||||||| ||||||| ||||   || | ||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  47388520 catttaatctttaaccttttaatgaattgaatgtacaaaattttagagaatatttcttcttttggatttcttaacatgtgccct 47388603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 8109142 - 8109074
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||| |||||||||||||||||||||||| |||||||||||  ||||||||| ||||||| | ||||||    
T  8109142 tgagtaatgctagcaacactctcttttgaacactctctctaatactcactttcttattggtttaaatca 8109074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 13069932 - 13069996
Alignment:
Q  247 attaatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    ||||||||| |||||||| || |||||||||||||||| ||||||| |||||||| |||||||||    
T  13069932 attaatgaggaatgctaggaatactctcttttgagcacactctctagcactcactcttttattgg 13069996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 38354254 - 38354358
Alignment:
Q  77 gaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatc 176  Q
    |||||||||||||||||||| |||  ||| |||||||| | |||||| |||||||||||| | |||||  ||||  || ||||| ||||||||||||||     
T  38354254 gaaatgttaacttgtgtccttaagatacaagttaatgaatcaaatatagaaataatttattgaaatgtatgcattacaattaatgtttaactttttaata 38354353  T
Q  177 aattt 181  Q
    |||||    
T  38354354 aattt 38354358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 41236135 - 41236021
Alignment:
Q  118 aaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgg 214  Q
    |||||| ||||||||||||   |||||| ||||  ||||||||||||||||||||||| ||||   || | ||| ||||||| ||||||||||||||| |    
T  41236135 aaatatagaaataatttattaaaatgtgtgcattacatttaatctttaactttttaataaattaaatgcacaaaattttataaaatatttcttcttttag 41236036  T
Q  215 gtttcttaacatgtg 229  Q
     ||| ||||||||||    
T  41236035 attttttaacatgtg 41236021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 13070120 - 13070053
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||||||||||| || | |||||| |||||||| |||||||| |||||||||| ||||    
T  13070120 tgctagcaacactctcttttgaacattttctctaacactcactcttttattgagtaaaatcaatgtag 13070053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 30866923 - 30866982
Alignment:
Q  250 aatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttatt 309  Q
    ||||||||||||||||||| ||||||||| | ||||||||||| |||||| |||||||||    
T  30866923 aatgagaaatgctagcaacgctctcttttaaacactctctctagcactcatttttttatt 30866982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 318
Target Start/End: Original strand, 44832459 - 44832525
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaat 318  Q
    |||| ||||||| ||||| ||||||||||||| ||| |||| |||||||||||||||||||| ||||    
T  44832459 tgaggaatgctaacaacattctcttttgagcattctttctatcactcacttttttattgggtgaaat 44832525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 37306401 - 37306461
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggt 313  Q
    |||||||||||| ||||||||||||  ||||||||||||| |||||||| || ||||||||    
T  37306401 gagaaatgctaggaacactctctttctagcactctctctaacactcactcttatattgggt 37306461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 47237920 - 47237856
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||| |||||||||||||||| ||||||||||| || ||||| ||||||||| | |||||||    
T  47237920 aatgctatcaacactctcttttgaacactctctctagcattcactcttttattggatgaaatcaa 47237856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 233
Target Start/End: Complemental strand, 49250201 - 49250040
Alignment:
Q  75 gggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaa 174  Q
    |||||||||||||||||  ||| |||| ||| ||||||   | ||||||  ||||| ||||| | |||||  | ||  ||||||||||||||||||||||    
T  49250201 gggaaatgttaacttgtacccttaaggtacaggttaatacatcaaatataaaaatagtttattgaaatgtctgtattacatttaatctttaactttttaa 49250102  T
Q  175 tcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    | ||||   || | ||| |||||  |||||||| ||||||||| ||||||||||| ||||||    
T  49250101 tgaattgaatgcacaaaattttaatgaatatttattcttttggatttcttaacatttgccct 49250040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 233
Target Start/End: Complemental strand, 31204446 - 31204310
Alignment:
Q  100 ggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttata 196  Q
    |||||| |||||| | | |||||| |||||  ||||| |||| ||| | ||  ||||||||||||||||||||||| ||||   || | | | ||| | |    
T  31204446 ggcacaagttaataaatcaaatatagaaatggtttattggaaggtgtgtattacatttaatctttaactttttaataaattgaatgcacacaatttaaaa 31204347  T
Q  197 gaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    |||||||  ||||||||||||||||||||||||||||    
T  31204346 gaatattatttcttttgggtttcttaacatgtgccct 31204310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 51475157 - 51475219
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggt 313  Q
    |||||||||||||| ||||||||||||  ||||||||||||| |||||||  | |||||||||    
T  51475157 atgagaaatgctaggaacactctctttctagcactctctctaacactcaccctcttattgggt 51475219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 2187997 - 2187928
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| |||| ||| ||||||||||||||||||||||||||| |  || || ||||||||||| |||||||    
T  2187997 tgagcaatgttaggaacactctcttttgagcactctctctagctttcgctcttttattgggtgaaatcaa 2187928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 9319862 - 9319959
Alignment:
Q  78 aaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaat 175  Q
    |||||||||| |||| ||| ||||||||  ||||| | | ||||||  ||||||||||| | |||||| ||||   ||||||||||||||||||||||    
T  9319862 aaatgttaacgtgtgcccttaaggcacaacttaattaatcaaatataaaaataatttattgcaatgtgtgcattatatttaatctttaactttttaat 9319959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 31217066 - 31216961
Alignment:
Q  75 gggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaa 174  Q
    |||||||| ||||||||| ||| ||| |||| |||||| | | |||||| |||||  ||||| |||| ||| | ||  ||||||||||||||||||||||    
T  31217066 gggaaatgctaacttgtgcccttaagacacaagttaataaatcaaatatagaaatggtttattggaaggtgtgtattacatttaatctttaactttttaa 31216967  T
Q  175 tcaatt 180  Q
    | ||||    
T  31216966 tgaatt 31216961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 2088848 - 2088780
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||  |||||||||||| ||||||| |||||||||| |||||||| ||| |||| || |||||||    
T  2088848 gagaaatattagcaacactcttttttgagtactctctctaacactcactctttaattgagtgaaatcaa 2088780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 39016660 - 39016728
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||| |||||||| | |||||||| || |||| ||| ||||||||| | |||||||    
T  39016660 gagaaatgctagcaacattctcttttaaacactctctataacacttactattttattggatgaaatcaa 39016728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 39810581 - 39810529
Alignment:
Q  266 aacactctcttttgagcactctctctaccactcacttttttattgggtaaaat 318  Q
    ||||||||||||  ||||||||||||| ||| |||| ||||||||||||||||    
T  39810581 aacactctctttctagcactctctctaacacccactcttttattgggtaaaat 39810529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 40991768 - 40991704
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||| ||||| | ||||||||||| |||||||| ||| ||||| | |||||||    
T  40991768 aatgctagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaa 40991704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 43771127 - 43771191
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| ||||||||||| ||||||| |||||||||||  ||||||| ||||||||| | |||||||    
T  43771127 aatggtagcaacactcacttttgaacactctctctatgactcactcttttattggatgaaatcaa 43771191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 227
Target Start/End: Original strand, 45891303 - 45891425
Alignment:
Q  108 ttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaat---ttgaataaacttttatagaatattt 204  Q
    ||||||| | |||||| |||||| ||||| | | | || ||||  ||||||||||||||||||||||| |||   ||| | ||| ||||| ||||||| |    
T  45891303 ttaatgagtcaaatatagaaatagtttattgaagtttgtgcattacatttaatctttaactttttaatgaattaattgcacaaaattttagagaatatat 45891402  T
Q  205 cttcttttgggtttcttaacatg 227  Q
    ||||||||  |||||||||||||    
T  45891403 cttcttttaagtttcttaacatg 45891425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 48622341 - 48622251
Alignment:
Q  140 aatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatg 227  Q
    |||||| ||||  |||| ||| |||||||||||||||| ||   || | ||| ||||| ||||||||||||||||| ||||||||||||||    
T  48622341 aatgtgtgcattgcattcaatatttaactttttaatcatttaaatgcacaaaattttagagaatatttcttcttttaggtttcttaacatg 48622251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 8567952 - 8567893
Alignment:
Q  261 ctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    ||||||||||||| |||| | |||| ||||||||||||||||||||| ||| | ||||||    
T  8567952 ctagcaacactctattttcaacactttctctaccactcacttttttaatggcttaaatca 8567893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 311
Target Start/End: Complemental strand, 30867096 - 30867057
Alignment:
Q  272 ctcttttgagcactctctctaccactcacttttttattgg 311  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  30867096 ctcttttgagcactatctctagcactcacttttttattgg 30867057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 20454716 - 20454666
Alignment:
Q  260 gctagcaacactctcttttgagcactctctctaccactcacttttttattg 310  Q
    |||||||||| |||||||||| ||||||||||| |||||||| | ||||||    
T  20454716 gctagcaacattctcttttgaacactctctctaacactcactctgttattg 20454666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 24834575 - 24834633
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    |||||||||||||||||||| |||||   ||||||||||| | ||||| ||||||||||    
T  24834575 gagaaatgctagcaacactcactttttgacactctctctaacgctcacatttttattgg 24834633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 27654657 - 27654595
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||| | ||||||||| | |||||| ||| ||||||| | |||||||    
T  27654657 tgctagcaacactctcttttcaacactctctcaaacactcaatttattattggtttaaatcaa 27654595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 20225347 - 20225388
Alignment:
Q  250 aatgagaaatgctagcaacactctcttttgagcactctctct 291  Q
    |||||| | |||||||||||||||||||||| ||||||||||    
T  20225347 aatgagtagtgctagcaacactctcttttgaacactctctct 20225388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 301
Target Start/End: Original strand, 31699473 - 31699522
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcact 301  Q
    ||||||||||||  ||||||||||||  ||||||||||||| ||||||||    
T  31699473 tgagaaatgctaagaacactctctttctagcactctctctaacactcact 31699522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 312
Target Start/End: Original strand, 34004748 - 34004801
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattggg 312  Q
    ||||||||||| |||||||| | ||||||||| |||||| || |||||||||||    
T  34004748 tgctagcaacattctctttttaacactctctccaccacttacatttttattggg 34004801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 51904616 - 51904677
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||||||||||||||||||| | ||||||||||| |||| || || ||||||| | ||||||    
T  51904616 tgctagcaacactctcttttcaacactctctctaacacttacattcttattggcttaaatca 51904677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 6011629 - 6011577
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttt 303  Q
    |||||||||||||  ||||||| ||||| |||| |||||||| ||||||||||    
T  6011629 atgagaaatgctaagaacactccctttttagcagtctctctaacactcacttt 6011577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 301
Target Start/End: Original strand, 16178589 - 16178629
Alignment:
Q  261 ctagcaacactctcttttgagcactctctctaccactcact 301  Q
    ||||||| ||||||||||| |||||||||||| ||||||||    
T  16178589 ctagcaatactctcttttgtgcactctctctagcactcact 16178629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 20454545 - 20454605
Alignment:
Q  261 ctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||  ||||| | ||||||||||| |||||||| ||||||| | |||||||||    
T  20454545 ctagcaacacttacttttcaacactctctctagcactcactcttttattagataaaatcaa 20454605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 26361307 - 26361351
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcact 301  Q
    |||||||||||||||||||||||| ||| |||||||  |||||||    
T  26361307 aatgctagcaacactctcttttgaacaccctctctaatactcact 26361351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 50164400 - 50164460
Alignment:
Q  261 ctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| ||||||| ||||| | ||||||||||| ||||||||  |||||||| |||||||||    
T  50164400 ctagtaacactcactttttaacactctctctagcactcactcatttattggataaaatcaa 50164460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 286
Target Start/End: Original strand, 51206057 - 51206085
Alignment:
Q  258 atgctagcaacactctcttttgagcactc 286  Q
    |||||||||||||||||||||||||||||    
T  51206057 atgctagcaacactctcttttgagcactc 51206085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 11135729 - 11135804
Alignment:
Q  246 aattaatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  11135729 aattaatgaggaatgctagcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaa 11135804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 41095607 - 41095676
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||    
T  41095607 aatgctagcaacactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaatgtag 41095676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 41095792 - 41095724
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||| |||||||    
T  41095792 gagaaatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaa 41095724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 11135937 - 11135852
Alignment:
Q  241 ttataaattaatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||| |||| |||||  |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||||||| ||||    
T  11135937 ttattaattgatgagggatgctagcaacactctcttttgaggactctctctagcactcactcttttattgggtgaaatcaatgtag 11135852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 39275818 - 39275969
Alignment:
Q  75 gggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaa 174  Q
    ||||||||||||||||||  || || ||||| |||||||||| ||| ||  |||||| |||| | |||||| |||| | |||||||||||||||||| ||    
T  39275818 gggaaatgttaacttgtgcgcttaaagcacaagttaatgattcaaacatataaataaattattgaaatgtgtgcattttatttaatctttaacttttaaa 39275917  T
Q  175 tcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaa 223  Q
    |   ||   || ||||| ||||| ||||||||||||||||||||||||||||    
T  39275918 tgctttgaatgcataaaattttagagaatatttcttcttttgggtttcttaa 39275969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 41917996 - 41918060
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||| |||||||    
T  41917996 aatgctagcaacactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaa 41918060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 11430436 - 11430506
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||| ||||||| ||||||||||||||||||||||| |||| |||||||| ||||||||||| |||||||    
T  11430436 atgaggaatgctaacaacactctcttttgagcactctttctagcactcactcttttattgggtgaaatcaa 11430506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 11430622 - 11430568
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  11430622 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattgg 11430568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 13388335 - 13388405
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtagt 327  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||||||| | ||||||| |||||    
T  13388335 aatgctagcaacactctcttttgaatactctctctaacactcacttttttattggatgaaatcaatgtagt 13388405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 15279164 - 15279059
Alignment:
Q  75 gggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaa 174  Q
    |||||||||||| || || ||| ||| |||| |||||||||| |||||| ||||||||||||  ||||||| ||||  |||||||| |||||||||||||    
T  15279164 gggaaatgttaatttctgcccttaagacacaagttaatgattcaaatatagaaataatttattagaatgtgtgcattgcatttaatatttaactttttaa 15279065  T
Q  175 tcaatt 180  Q
    | ||||    
T  15279064 taaatt 15279059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 32848768 - 32848699
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    ||||| ||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||    
T  32848768 atgaggaatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatca 32848699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 50773105 - 50773170
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaat 318  Q
    ||||||||||||||| |||||||||||| ||||||||||| |||||| | ||||||||||||||||    
T  50773105 gagaaatgctagcaatactctcttttgaacactctctctagcactcattcttttattgggtaaaat 50773170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 233
Target Start/End: Complemental strand, 42549357 - 42549188
Alignment:
Q  67 ataaattagggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaa 166  Q
    |||||| || |||||||||| ||||| | | |||| ||| |||||||||| ||||||  |||||| | || ||||||||   || | ||||| |||||||    
T  42549357 ataaataagtgaaatgttaagttgtgcctttaaggtacaagttaatgattcaaatataaaaataaataattggaatgtgtatattttatttagtctttaa 42549258  T
Q  167 ctttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    ||||| |||  |||   || ||||| ||||| ||||||||||||||||| ||||||||||||| ||||||    
T  42549257 cttttaaatgcattgaatgtataaaattttagagaatatttcttcttttaggtttcttaacatatgccct 42549188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 51295846 - 51295718
Alignment:
Q  107 gttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatagaatatt 203  Q
    |||||||| | |||| | |||||||||||| |||||||| ||||  ||||||||||||||||||||||| ||||   || | ||| ||||| | | ||||    
T  51295846 gttaatgaatcaaatgtagaaataatttattggaatgtgtgcattacatttaatctttaactttttaatgaattgaatgcacaaaattttagaaattatt 51295747  T
Q  204 tcttcttttgggtttcttaacatgtgccct 233  Q
    | || |||||||||||||||||||||||||    
T  51295746 tatt-ttttgggtttcttaacatgtgccct 51295718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 29587251 - 29587123
Alignment:
Q  108 ttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatagaatattt 204  Q
    ||||||||| |||||| ||||||| |||| |||||||| |||| | ||||| |||||||||||| |||  |||   || | | | ||||| |||| ||||    
T  29587251 ttaatgattcaaatatagaaataaattattggaatgtgtgcattttatttagtctttaacttttaaatgcattgaatgcacataattttagagaacattt 29587152  T
Q  205 cttcttttgggtttcttaacatgtgccct 233  Q
     ||||||||||||||||||||||||||||    
T  29587151 attcttttgggtttcttaacatgtgccct 29587123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 321
Target Start/End: Original strand, 50424866 - 50424928
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||||  |||||||||||| || ||||||||||||||||| |||||||    
T  50424866 tgctagcaacactctcttttaggcactctctctaacattcacttttttattgggttaaatcaa 50424928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 43949138 - 43949221
Alignment:
Q  153 catttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    ||||||||||| |||||| |||| ||||   || | ||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  43949138 catttaatcttcaactttgtaatgaattgaatgcacaaaattttagagaatatttcttcttttgggtttcttaacatgtgccct 43949221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 10881947 - 10881829
Alignment:
Q  118 aaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgg 214  Q
    |||||| |||||  |||||  ||||||| ||||  |||||||||||||| |||||||| ||||   || ||||| |||||  ||||||||||||||||||    
T  10881947 aaatatagaaattgtttattagaatgtgtgcattacatttaatctttaattttttaatgaattgaatgcataaaattttagggaatatttcttcttttgg 10881848  T
Q  215 gtttcttaacatgtgccct 233  Q
     |||||| |||||||||||    
T  10881847 ttttcttgacatgtgccct 10881829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 13114853 - 13114785
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||| |||||||||||||  ||||||||||| |||||||| ||||||| | |||||||||    
T  13114853 gagaaatgctagcgacactctcttttggacactctctctaacactcactcttttattagataaaatcaa 13114785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 18023911 - 18023786
Alignment:
Q  108 ttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatagaatattt 204  Q
    ||||||||| |||||| |||||||||||| | ||| || |||   || |||||||||||||||||||| ||||   |||||||| ||||  | |||||||    
T  18023911 ttaatgattcaaatatagaaataatttattgaaatatgtgcactgcaattaatctttaactttttaatgaattgaatgaataaaatttttgaaaatattt 18023812  T
Q  205 cttcttttgggtttcttaacatgtgc 230  Q
    ||||| |||  |||||||||||||||    
T  18023811 cttctcttgaatttcttaacatgtgc 18023786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 30678910 - 30678973
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| | ||||||| | ||||||    
T  30678910 aatgctagcaacactcttttttgagcactctctctaacactcactctcttattggcttaaatca 30678973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 301
Target Start/End: Complemental strand, 29068270 - 29068216
Alignment:
Q  247 attaatgagaaatgctagcaacactctcttttgagcactctctctaccactcact 301  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||    
T  29068270 attaatgagaaatgctaggaacactctctttctagcactctctctaacactcact 29068216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 29418664 - 29418594
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcactt-ttttattgggtaaaatcaacgtag 326  Q
    ||||||||||||| |||||||||| |||||||| || ||||||||| ||||||||||| ||||||| ||||    
T  29418664 aatgctagcaacagtctcttttgatcactctctatatcactcactttttttattgggtgaaatcaatgtag 29418594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 14094180 - 14094116
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||| ||| | |||||||| ||||||||| | |||||||||||||||||||| |||||||    
T  14094180 aatgctagcgacattatcttttgaacactctctccagcactcacttttttattgggtgaaatcaa 14094116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 18157033 - 18157093
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    ||||||||||||||  |||||||||||| | ||||||||||| ||| ||||||||||||||    
T  18157033 atgagaaatgctagggacactctcttttcaacactctctctaacacccacttttttattgg 18157093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 28109885 - 28109933
Alignment:
Q  273 tcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||||    
T  28109885 tcttttgagcactttctctagcactcacttttttattgggtgaaatcaa 28109933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 32848583 - 32848635
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    ||||||||||||||||||||||||||| |||||| |||| ||| |||||||||    
T  32848583 tgctagcaacactctcttttgagcactttctctagcacttactcttttattgg 32848635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 51050160 - 51050051
Alignment:
Q  126 aaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttctta 222  Q
    ||||||||||| |||||||| | |   ||||||||| |||| |||||||||||||   || | ||  ||||| |||||||||||| |||| |||||||||    
T  51050160 aaataatttattggaatgtgtgtaatacatttaatcgttaattttttaatcaattaaatgcacaatattttagagaatatttctttttttaggtttctta 51050061  T
Q  223 acatgtgccc 232  Q
    ||||||||||    
T  51050060 acatgtgccc 51050051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 321
Target Start/End: Original strand, 13114670 - 13114732
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||||  ||||||||||| |||||||| | | ||||||| |||||||    
T  13114670 tgctagcaacactctcttttggacactctctctaacactcactatctcattgggttaaatcaa 13114732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 8899202 - 8899141
Alignment:
Q  250 aatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    |||||| ||||||||||||| |||||||||| |||||||||||  ||||||| | |||||||    
T  8899202 aatgagtaatgctagcaacaatctcttttgaacactctctctaatactcactctcttattgg 8899141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 14093999 - 14094068
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||| ||||||||||||||||||| |||||| | || |||||||||||| |||| || ||||||| ||||    
T  14093999 aatgttagcaacactctcttttgaacactctttgtaacactcactttttgattgagtgaaatcaatgtag 14094068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 44739119 - 44739168
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcactttttt 306  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||| ||||    
T  44739119 aatgttagcaacactctcttttgaacactctctctagcactcactctttt 44739168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 4578752 - 4578687
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||||||||| | ||||||||  | |||||||| ||||||||||| ||||||| ||||    
T  4578752 tgctagcaacactctcttttcaacactctct--aacactcactcttttattgggtgaaatcaatgtag 4578687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 9165303 - 9165367
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||| | |||||||||||||| |||||| |||  |||||||| ||||||||||| |||||||    
T  9165303 aatgctatccacactctcttttgaccactctatcttgcactcactcttttattgggtgaaatcaa 9165367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 24886227 - 24886175
Alignment:
Q  249 taatgagaaatgctagcaacactctcttttgagcactctctctaccactcact 301  Q
    |||||||||||||||  ||||||||||||  ||||||||||||| ||||||||    
T  24886227 taatgagaaatgctaagaacactctctttctagcactctctctaacactcact 24886175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 10783568 - 10783631
Alignment:
Q  73 tagggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttat 136  Q
    |||||||||| ||||||||||| ||||| || | |||||||| | ||| |||||||||||||||    
T  10783568 tagggaaatgctaacttgtgtcatcaagacataagttaatgagtcaaaaatggaaataatttat 10783631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 292
Target Start/End: Complemental strand, 13889325 - 13889290
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctcta 292  Q
    |||||||||||||||||||||||| |||||||||||    
T  13889325 aatgctagcaacactctcttttgaacactctctcta 13889290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 233
Target Start/End: Complemental strand, 39412494 - 39412459
Alignment:
Q  198 aatatttcttcttttgggtttcttaacatgtgccct 233  Q
    |||||||||||||||| |||||||||||||||||||    
T  39412494 aatatttcttcttttgagtttcttaacatgtgccct 39412459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 43275770 - 43275829
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattg 310  Q
    |||||||||||||| | ||||| ||||  ||||||||||| | |||||||||||||||||    
T  43275770 atgagaaatgctaggagcactcactttctagcactctctccaacactcacttttttattg 43275829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 44595795 - 44595706
Alignment:
Q  140 aatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacat 226  Q
    |||||| ||||  ||||||| ||||||||||||||| ||||   || | ||| ||||| ||||||||||||||||| | |||||||||||    
T  44595795 aatgtgtgcattacatttaaactttaactttttaatgaattgaatgcacaaaattttaaagaatatttcttcttttagatttcttaacat 44595706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 50773285 - 50773226
Alignment:
Q  262 tagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||| ||||||   ||||||||| |||||||| ||||||||| |||||||||    
T  50773285 tagcaacactctattttgactgctctctctaacactcactcttttattggataaaatcaa 50773226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 283
Target Start/End: Complemental strand, 9165456 - 9165426
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagca 283  Q
    |||||||||||||||||||||||||||||||    
T  9165456 gagaaatgctagcaacactctcttttgagca 9165426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 291
Target Start/End: Complemental strand, 13388506 - 13388472
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctct 291  Q
    |||||||||||||||||||||||||||||| ||||    
T  13388506 aatgctagcaacactctcttttgagcactcactct 13388472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 15661063 - 15661009
Alignment:
Q  267 acactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||  ||||||||||| |||||||| | ||||||||| |||||||    
T  15661063 acactctcttttggacactctctctaacactcactctattattgggttaaatcaa 15661009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 291
Target Start/End: Complemental strand, 41918169 - 41918131
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctct 291  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  41918169 gagaaatgccagcaacactctcttttgagcactcactct 41918131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 13771305 - 13771257
Alignment:
Q  72 ttagggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaat 121  Q
    ||||||||||||||||||||| ||| |||||||| |||||||| ||||||    
T  13771305 ttagggaaatgttaacttgtg-ccttaaggcacaagttaatgagttaaat 13771257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 19101602 - 19101663
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    ||||||||  |||||||||||| |||||||||||  ||||||||| ||||||| | ||||||    
T  19101602 tgctagcactactctcttttgaacactctctctaatactcactttcttattggtttaaatca 19101663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 291
Target Start/End: Complemental strand, 27570409 - 27570372
Alignment:
Q  254 agaaatgctagcaacactctcttttgagcactctctct 291  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  27570409 agaaatgctagcaacattctcttttgaacactctctct 27570372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 28110055 - 28109986
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    ||||| |||| ||| ||||||||||||| || ||| ||||||  ||||||||||||||||| | ||||||    
T  28110055 atgaggaatgttaggaacactctcttttaagtactttctctaatactcacttttttattggatgaaatca 28109986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 41948145 - 41948198
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattg 310  Q
    ||||||||||| | |||||||||| ||||||||||| |||||||| | ||||||    
T  41948145 aatgctagcaatattctcttttgaacactctctctaacactcactctcttattg 41948198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 43851219 - 43851150
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| |||| ||||||||||||||||| ||| | |||||||  |||||||  |||||||||| |||||||    
T  43851219 tgaggaatgttagcaacactctcttttaagcgcactctctagtactcactcatttattgggtgaaatcaa 43851150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 50308774 - 50308823
Alignment:
Q  273 tcttttgagcactctctctaccactcacttttttattgggtaaaatcaac 322  Q
    |||||| |||| |||||||| |||||||| ||||||||||| ||||||||    
T  50308774 tcttttaagcattctctctagcactcactcttttattgggtgaaatcaac 50308823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 3872812 - 3872768
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcact 301  Q
    |||||||||||||||| ||||| | ||||||||||| ||||||||    
T  3872812 aatgctagcaacactcacttttcaacactctctctagcactcact 3872768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 6133803 - 6133739
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||| ||||| | || |||||||| |||||||  ||||||||| | |||||||    
T  6133803 aatgctagcaacactcacttttcaacaatctctctagcactcacccttttattggatgaaatcaa 6133739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 19101780 - 19101716
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||| || ||||||  |||||||| || |||||||| ||||||||| | |||||||    
T  19101780 aatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaa 19101716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 22540369 - 22540433
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||| || ||||||  |||||||| || |||||||| ||||||||| | |||||||    
T  22540369 aatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaa 22540433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 25543341 - 25543393
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttatt 309  Q
    |||||||||||||||| ||||| | ||||||||||| |||| ||| |||||||    
T  25543341 aatgctagcaacactcacttttaaacactctctctaacacttactcttttatt 25543393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 33828207 - 33828101
Alignment:
Q  101 gcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatag 197  Q
    ||||| |||||||| | ||||||  ||||| ||||| |||||||| | ||  ||| ||||||||||||||||||| ||||   || ||||| ||||| ||    
T  33828207 gcacaagttaatgaatcaaatatataaatagtttattggaatgtgtgtattacatctaatctttaactttttaataaattgaatgcataaaattttagag 33828108  T
Q  198 aatattt 204  Q
    |||||||    
T  33828107 aatattt 33828101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 33839758 - 33839864
Alignment:
Q  101 gcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatag 197  Q
    ||||| |||||||| | ||||||  ||||| ||||| |||||||| | ||  ||| ||||||||||||||||||| ||||   || ||||| ||||| ||    
T  33839758 gcacaagttaatgaatcaaatatataaatagtttattggaatgtgtgtattacatctaatctttaactttttaataaattgaatgcataaaattttagag 33839857  T
Q  198 aatattt 204  Q
    |||||||    
T  33839858 aatattt 33839864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 39039534 - 39039470
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||| ||||| | |||||| | || |||||||| ||||||||| | |||||||    
T  39039534 aatgctagcaacactcacttttcaacactctttttagcactcactcttttattggatgaaatcaa 39039470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 231
Target Start/End: Complemental strand, 50758 - 50604
Alignment:
Q  75 gggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaa 174  Q
    ||||||| |||| | ||| |||||||||||| |||||||||| ||     |||||||||||| |||||||| ||||   ||||||||| ||| |||||||    
T  50758 gggaaatattaaatcgtgccctcaaggcacaagttaatgattcaa-----gaaataatttattggaatgtgtgcattgtatttaatctctaagtttttaa 50664  T
Q  175 tcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgcc 231  Q
    ||||||   || | ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  50663 tcaattaaatgcacaaaattttagagaatatttcttcttttgggtttcttaacatgtgcc 50604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 9e-24; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 39108672 - 39108538
Alignment:
Q  102 cacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttataga 198  Q
    |||| |||||||||| ||||||  ||||||||||| |||||||| ||||  ||||||| |||||| |||||||||||||   || | ||| ||||| |||    
T  39108672 cacaagttaatgattcaaatataaaaataatttattggaatgtgtgcattgcatttaaactttaattttttaatcaattatatgcacaaaattttagaga 39108573  T
Q  199 atatttcttcttttgggtttcttaacatgtgccct 233  Q
    ||||||||| ||||| |||||||||||||||||||    
T  39108572 atatttcttattttgagtttcttaacatgtgccct 39108538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 1205829 - 1205889
Alignment:
Q  258 atgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaat 318  Q
    |||||||||||||||||||||||||||||||| || |||||||| ||||||| ||||||||    
T  1205829 atgctagcaacactctcttttgagcactctctttagcactcactcttttattaggtaaaat 1205889  T

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Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 233
Target Start/End: Complemental strand, 4993391 - 4993232
Alignment:
Q  75 gggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaa 174  Q
    |||||||||||| |||||  || |||||| | |||||||||| |||||| |||||||| | |  |||| || | ||  ||||||||||||||||||||||    
T  4993391 gggaaatgttaatttgtgctcttaaggcataagttaatgattcaaatatagaaataatattt--gaatatgtgtattgcatttaatctttaactttttaa 4993294  T
Q  175 tcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    | ||||   || | ||| ||||| |||||||||||||||||   ||||||||||||||||||    
T  4993293 tgaattaaatgcacaaaattttagagaatatttcttcttttatatttcttaacatgtgccct 4993232  T

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Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 35689490 - 35689545
Alignment:
Q  266 aacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| | |||||||    
T  35689490 aacactctcttttgagcactctctctagcactcacttttttattggatgaaatcaa 35689545  T

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Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 180
Target Start/End: Complemental strand, 5957156 - 5957054
Alignment:
Q  78 aaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatca 177  Q
    |||||||||||||||| || |||| ||| |||||||| | ||   | |||||||||||| |||||||| |||| |||| ||||||||||||||||||| |    
T  5957156 aaatgttaacttgtgttcttaaggtacaagttaatgaatcaatagtagaaataatttattggaatgtgcgcatttcatataatctttaactttttaatga 5957057  T
Q  178 att 180  Q
    |||    
T  5957056 att 5957054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 326
Target Start/End: Original strand, 7599423 - 7599489
Alignment:
Q  260 gctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||| ||||||||| ||| |||| ||||||||||||||||| |||||||||| ||||    
T  7599423 gctagcaacactcttttttgagcattctttctaacactcacttttttattgagtaaaatcaatgtag 7599489  T

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Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 268 - 313
Target Start/End: Complemental strand, 35689651 - 35689606
Alignment:
Q  268 cactctcttttgagcactctctctaccactcacttttttattgggt 313  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  35689651 cactctcttttgagcactctctctagcactcacttttttattgggt 35689606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 231
Target Start/End: Complemental strand, 10361294 - 10361128
Alignment:
Q  69 aaattagggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatat-ggaaataatttatcggaatgtgggcatatcatttaatctttaac 167  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||| ||||||   ||| ||  ||| ||| |||| | ||  |||||||| ||||||    
T  10361294 aaataagggaaatgttaacttgtgccctcaaggcacaagttaatgattcaaatatataaaaaaacatattggattgtgtgtattgcatttaatatttaac 10361195  T
Q  168 tttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgcc 231  Q
    |||||||||| ||   || | ||| |  || ||||  ||||||||||||| ||||||||||||||||    
T  10361194 tttttaatcatttaaatgcacaaaatcatagagaaagtttcttcttttggatttcttaacatgtgcc 10361128  T

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Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 82 - 233
Target Start/End: Original strand, 40740670 - 40740824
Alignment:
Q  82 gttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaattt 181  Q
    ||||||||||| ||| |||  ||| ||||| || | |||||| ||| || |||||  |||||||  |||  ||||||||||||||||||||||| | |||    
T  40740670 gttaacttgtgcccttaagatacaagttaaagaatcaaatatagaagtagtttattagaatgtgtacattacatttaatctttaactttttaatga-ttt 40740768  T
Q  182 gaat----aaacttttatagaatatttcttcttttgggtttcttaacatgtgccct 233  Q
    ||||    ||| ||||| ||||||||| ||||||| ||||| ||||||||||||||    
T  40740769 gaatgcacaaaattttagagaatatttattcttttaggttttttaacatgtgccct 40740824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 6387560 - 6387626
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||||||||||  | || ||||||| |||||||| ||||||||| |||||||||    
T  6387560 gagaaatgctagcaacactctctttt--ggacactctctaacactcactcttttattggataaaatcaa 6387626  T

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Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 8914772 - 8914832
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaa 317  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||| ||| ||||| |||||    
T  8914772 aatgctagcaacactcacttttgagcgctctctctaacactcactctttcattggataaaa 8914832  T

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Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 13407322 - 13407386
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||||||||||||| ||||||||||| |||||| | | | ||||||| |||||||    
T  13407322 aatgctagcaacactctcttttgaacactctctctaacactcattctctcattgggttaaatcaa 13407386  T

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Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 19174071 - 19174197
Alignment:
Q  107 gttaatgatttaaatatggaaataat-ttatcggaatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatagaatat 202  Q
    |||||||||| |||||| |||| ||  ||||  ||||||| ||||  |||||||| |||||||||||||||| ||   || ||||| ||||| ||||| |    
T  19174071 gttaatgattcaaatatagaaaaaaaattatttgaatgtgtgcattgcatttaatatttaactttttaatcatttaaatgcataaaattttaaagaatgt 19174170  T
Q  203 ttcttcttttgggtttcttaacatgtg 229  Q
    |||||||||| ||||| ||||||||||    
T  19174171 ttcttcttttaggttttttaacatgtg 19174197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 23143002 - 23142938
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| ||| |||||||| |||||||||||||||| | |||| ||||||||||||||| |||||||    
T  23143002 aatgttaggaacactcttttttgagcactctctcaagcacttacttttttattgggtgaaatcaa 23142938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 16983575 - 16983512
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||||||||||||||||||||||| |||||||||||  ||||||| | ||||||| | ||||||    
T  16983575 aatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatca 16983512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 13407497 - 13407439
Alignment:
Q  263 agcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||| |||||  ||||||||||| |||| ||||||||||||| |||||||||    
T  13407497 agcaacactcttttttggacactctctctaacactaacttttttattggataaaatcaa 13407439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 222
Target Start/End: Original strand, 36434664 - 36434792
Alignment:
Q  98 aaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatca-tttaatctttaactttttaatcaatt---tgaataaactttt 193  Q
    |||||||| |||||||||| ||||||  ||||||||||| | |||||| ||||  || |||||||||| ||||||| || ||||   || | ||| ||||    
T  36434664 aaggcacatgttaatgattcaaatataaaaataatttattgaaatgtgtgcattgcattttaatctttcacttttttataaattgaatgcacaaaatttt 36434763  T
Q  194 atagaatatttcttcttttgggtttctta 222  Q
    | |||||||||||||||| | ||||||||    
T  36434764 aaagaatatttcttctttcgagtttctta 36434792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 321
Target Start/End: Original strand, 43026282 - 43026356
Alignment:
Q  244 taaattaatgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||| ||||| ||||||||||| |||||||| | ||||||||  | |||||||||||||||| |||||||||||    
T  43026282 taaattaa-gagaagtgctagcaacattctcttttaaacactctct--agcactcacttttttattaggtaaaatcaa 43026356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 11008144 - 11008063
Alignment:
Q  96 tcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaactttttaatca 177  Q
    |||||||||| ||||||||||||||||| | || ||||||| | |||||| ||||   ||||||| ||| ||||||||||||    
T  11008144 tcaaggcacaagttaatgatttaaatataggaaaaatttattgaaatgtgtgcattgaatttaatatttcactttttaatca 11008063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 228
Target Start/End: Original strand, 32062259 - 32062401
Alignment:
Q  89 tgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttatcggaatgtgggcatatcatttaatctttaa-ctttttaatcaatt---tgaa 184  Q
    |||||||| ||| |||| |||||||| | |||||| |||||| || || ||||||||  |||  |||||||||||| | ||||||||| ||||   || |    
T  32062259 tgtgtccttaagtcacaagttaatgaatcaaatatagaaatagtt-attggaatgtgtacattacatttaatcttttatctttttaatgaattgaatgca 32062357  T
Q  185 taaacttttatagaatatttcttcttttgggtttcttaacatgt 228  Q
     ||| ||||| | |||||||||||||||| ||||||||||||||    
T  32062358 caaaattttaaaaaatatttcttcttttgagtttcttaacatgt 32062401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 32072095 - 32072152
Alignment:
Q  254 agaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    |||||||||||||||| || ||||| | ||||||||||| |||||||| |||||||||    
T  32072095 agaaatgctagcaacattcacttttcaacactctctctagcactcactcttttattgg 32072152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 43121668 - 43121611
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttatt 309  Q
    |||||||| ||||||| |||| ||||||| ||||||||||| |||||| |||||||||    
T  43121668 tgagaaatactagcaatactcacttttgaacactctctctaacactcatttttttatt 43121611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 5980057 - 5980001
Alignment:
Q  260 gctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaa 316  Q
    ||||||||||||||||||||| |||||||||||  ||||||| | ||||||| ||||    
T  5980057 gctagcaacactctcttttgaacactctctctaatactcactctcttattggttaaa 5980001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 289
Target Start/End: Original strand, 23142816 - 23142848
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctct 289  Q
    |||||||||||||||||||||||||||||||||    
T  23142816 aatgctagcaacactctcttttgagcactctct 23142848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 292
Target Start/End: Complemental strand, 1961439 - 1961404
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctcta 292  Q
    |||||||||||||||||||||||| |||||||||||    
T  1961439 aatgctagcaacactctcttttgaacactctctcta 1961404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 16983395 - 16983458
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatca 320  Q
    |||||||||||||||| ||||| | |||||| |||| ||||||||  |||||||| ||||||||    
T  16983395 aatgctagcaacactcacttttcaacactctatctagcactcactgatttattggataaaatca 16983458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 9952942 - 9952872
Alignment:
Q  251 atgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||||||||||||| |||| |  ||||| | ||||||||||| |||||| ||||||||||| | |||||||    
T  9952942 atgagaaatgctagtaacatttacttttcaacactctctctagcactcatttttttattggatgaaatcaa 9952872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 326
Target Start/End: Original strand, 28211880 - 28211953
Alignment:
Q  252 tgagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    ||||||||| |||||||||||||||||||||| | | |||| || ||||  ||||||||||| ||||||| ||||    
T  28211880 tgagaaatgttagcaacactctcttttgagcattatttctaacattcac-attttattgggtgaaatcaatgtag 28211953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 12212126 - 12212187
Alignment:
Q  260 gctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||| | || |||||||| || ||||| |||| |||||| |||||||    
T  12212126 gctagcaacactctcttttcaacattctctctaacattcactcttttcttgggtgaaatcaa 12212187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 12456554 - 12456615
Alignment:
Q  260 gctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    ||||||||||||||||||| | || |||||||| || ||||| |||| |||||| |||||||    
T  12456554 gctagcaacactctcttttcaacattctctctaacattcactcttttcttgggtgaaatcaa 12456615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 31691690 - 31691637
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattg 310  Q
    |||||||||||||||| |||||||  ||||||| || |||||||| ||||||||    
T  31691690 aatgctagcaacactcacttttgaaaactctctttaacactcactcttttattg 31691637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 43027923 - 43027844
Alignment:
Q  154 atttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgc 230  Q
    ||||||| |||||||||||||| ||||   || ||||| ||||| | | ||||| |||||||| ||||||||||||||||    
T  43027923 atttaatatttaactttttaataaattgaatgcataaaattttaaaaattattttttcttttgagtttcttaacatgtgc 43027844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 7599601 - 7599537
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaa 321  Q
    |||| |||||||||||| |||||| ||||||||||| |||  ||| ||||||||| | |||||||    
T  7599601 aatgttagcaacactcttttttgaacactctctctagcacctactcttttattggatgaaatcaa 7599537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 16896429 - 16896373
Alignment:
Q  253 gagaaatgctagcaacactctcttttgagcactctctctaccactcacttttttatt 309  Q
    |||||||||||||  ||||||||||  ||||||||||||| |||||| |||| ||||    
T  16896429 gagaaatgctagcggcactctctttctagcactctctctaacactcatttttctatt 16896373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 28414048 - 28413996
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttatt 309  Q
    ||||||| |||||||| ||||| | ||||||||||| | ||||||||||||||    
T  28414048 aatgctaacaacactcacttttcaacactctctctagcgctcacttttttatt 28413996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 32268789 - 32268848
Alignment:
Q  76 ggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatatggaaataatttat 136  Q
    ||||||| |||||||||||||| || ||||  ||||||||||||||||  |||||||||||    
T  32268789 ggaaatgctaacttgtgtcctccag-cacaaattaatgatttaaatataaaaataatttat 32268848  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 38666335 - 38666375
Alignment:
Q  65 ttataaattagggaaatgttaacttgtgtcctcaaggcaca 105  Q
    |||||| | ||||||||||||||||||||||| ||||||||    
T  38666335 ttataattaagggaaatgttaacttgtgtccttaaggcaca 38666375  T

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Target: scaffold0119 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 22933 - 22841
Alignment:
Q  126 aaataatttatcggaatgtgggcatatcatttaatctttaactttttaatcaa--tttgaataaacttttatagaatatttcttcttttgggtt 217  Q
    ||||||||||| |||| ||| ||||| ||||||||||||||||||||||| ||  |||| | ||| ||||||| |||||||||| |||||||||    
T  22933 aaataatttattggaacgtgcgcata-catttaatctttaactttttaataaatttttgcacaaaattttataaaatatttctttttttgggtt 22841  T

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Target: scaffold0054 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 326
Target Start/End: Original strand, 30914 - 30980
Alignment:
Q  260 gctagcaacactctcttttgagcactctctctaccactcacttttttattgggtaaaatcaacgtag 326  Q
    |||||||||||||||||||||| ||||| |||| || ||||||||||||||||| | ||||| ||||    
T  30914 gctagcaacactctcttttgagtactctttctagcattcacttttttattgggtgacatcaatgtag 30980  T

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Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 16788 - 16836
Alignment:
Q  75 gggaaatgttaacttgtgtcctcaaggcacacgttaatgatttaaatat 123  Q
    |||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  16788 gggaaatgttaacttgtgccctcaatgcacaagttaatgatttaaatat 16836  T

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Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 16865 - 16960
Alignment:
Q  140 aatgtgggcatatcatttaatctttaactttttaatcaatt---tgaataaacttttatagaatatttcttcttttgggtttcttaacatgtgccc 232  Q
    |||||| ||||  |||||||| |||||||||||||||| ||   || ||||| ||| | | ||||||| ||||||| | |||||||||||||||||    
T  16865 aatgtgtgcattgcatttaatatttaactttttaatcatttaaatgcataaaatttcaaaaaatatttattcttttagatttcttaacatgtgccc 16960  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 311
Target Start/End: Original strand, 204707 - 204761
Alignment:
Q  257 aatgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    ||||||||||||||||| |||||| || ||||||||  ||||||| |||||||||    
T  204707 aatgctagcaacactcttttttgaacattctctctagtactcactcttttattgg 204761  T

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Target: scaffold0192 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 13357 - 13394
Alignment:
Q  74 agggaaatgttaacttgtgtcctcaaggcacacgttaa 111  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  13357 agggaaatgttaacttgtgttctcaaggcacaagttaa 13394  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 297016 - 296964
Alignment:
Q  259 tgctagcaacactctcttttgagcactctctctaccactcacttttttattgg 311  Q
    |||||||||||||||||||| | ||||||||| | |||||||||  |||||||    
T  297016 tgctagcaacactctcttttcaacactctctcaaacactcacttcattattgg 296964  T

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