View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14933_low_2 (Length: 578)
Name: NF14933_low_2
Description: NF14933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14933_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 532; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 532; E-Value: 0
Query Start/End: Original strand, 16 - 571
Target Start/End: Complemental strand, 6507653 - 6507098
Alignment:
| Q |
16 |
tttccatcaaaggtagcaatgctagaacaaatttcatatatccttcttcttcttctgatgaagacgataccaattttcacaatgttgttgatcctccttt |
115 |
Q |
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| T |
6507653 |
tttccatcaaaggtagcaatgctagaacaaatttcatatatccttcttcttcttctgatgaagatgataccaattttcacaatgttgttgatcctccttt |
6507554 |
T |
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| Q |
116 |
tgatgttcaaagaacacaaccaattaccaatcaaaatagcctctctcagcttgattctaattctcatttgaacaatgacaatttgttattctctaatgat |
215 |
Q |
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| T |
6507553 |
tgatgttcaaagaacacaaccaattaccaatcaaaataccctctctcagcttgattctaattctcatttgaacaatgacaatttgttattctctaatgat |
6507454 |
T |
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| Q |
216 |
tataataactcaggctatcttgaaagcattgttcctgttaattgcttcaaacctatttccaacacaaacaattcaaactttgatgatcataggagtaatg |
315 |
Q |
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| T |
6507453 |
tataataactcaggctatcttgaaagcattgttcctgttaattgcttcaaacctatttccaacaccaacaattcaaactttgatgatcatagtagtaatg |
6507354 |
T |
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| Q |
316 |
caagtgattcaagtgaacaccaaaatgttgttgattccattagcacaacaaacttcatgcatggtcaatcattttttgactacactccattctctcaaga |
415 |
Q |
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| T |
6507353 |
caagtgattcaagtgaacaccaaaatgttgttgattccatttgcacaacaaacttcatgcatggtcaatcattttttgactacactccattctctcaaga |
6507254 |
T |
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| Q |
416 |
agcatataacattaacacaagtgattatagtgaaggattatgggattgcaattacaatgaactttcagctatttttaaccaaccaccaaggagtgaaatt |
515 |
Q |
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| T |
6507253 |
agcatataacattaacacaagtaattatagtgaaggattatgggattgcaattacaatgaactttcagctatttttaaccaaccaccaaggagtgaaatt |
6507154 |
T |
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| Q |
516 |
ccaagctatggactaatgacaactcaagatgtctcttcaactacctattcttctca |
571 |
Q |
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| T |
6507153 |
ccaagctatggactaatgacaactcaagatgtctcttcaactacctattcttctca |
6507098 |
T |
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