View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14934_low_12 (Length: 378)
Name: NF14934_low_12
Description: NF14934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14934_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 62 - 374
Target Start/End: Original strand, 44941788 - 44942100
Alignment:
| Q |
62 |
tatgcaacaataactaacatgaagcgtggtaaactaaaattttatcattagatacctaactaaagataaatacaaaatgttaaggattgccaagtgtcaa |
161 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44941788 |
tatgcaacaataactaacatgaagcgtggtaaactaaaattttatcattagatacataactaaagataaatacaaaatgttaaggattgccaagtgtcaa |
44941887 |
T |
|
| Q |
162 |
cagataaaaacannnnnnnnnnnnntactgacagacatcatgaaaagagtccactggtaacgagactgagcattcaagccaataacagtgctagaagggt |
261 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44941888 |
cagataaaaacaagagagagagagatactgacagacatcatgaaaagagtccactggtaacgagactgagcattcaagccaataacagtgctagaagggt |
44941987 |
T |
|
| Q |
262 |
gtcggattatagtgtagagaagccaaacatgataaattaacaacaacaatataccaacaggaaccaaaacataatccaaatcctctatttccatcttctt |
361 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44941988 |
gtcggattatagtgtagagaagccaaacatgataaattaacaacaccaatataccaacaggaaccaaaacataatccaaatcctctatttccatcttctt |
44942087 |
T |
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| Q |
362 |
cccctttgcttct |
374 |
Q |
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|| |||||||||| |
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| T |
44942088 |
cctctttgcttct |
44942100 |
T |
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