View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14934_low_17 (Length: 301)
Name: NF14934_low_17
Description: NF14934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14934_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 19 - 258
Target Start/End: Original strand, 5715737 - 5715976
Alignment:
| Q |
19 |
ataatggactcaatgattgaaaagtcttcaatggtttttgtcaataatgagaataatggttgagaagcttgtaatggtgtttggctgaaataggtgtggg |
118 |
Q |
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| T |
5715737 |
ataatggactcaatgattgaaaagtcttcaatggtttttgtcaataatgagaataatgattgagaagcttgtaattgtgtttggctgaaataggtgtggg |
5715836 |
T |
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| Q |
119 |
cacagattcatgataaactatttttagaaaataatatctttccacaaaatctcaagagggtttaaatatctctttcaaattcnnnnnnncattaaattat |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |
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| T |
5715837 |
cacagattcatgataaactatttttagaaaataatatctttccacaaaatctcaagagggtttaaatatctctttcaaattcaaaaaatcgttaaattat |
5715936 |
T |
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| Q |
219 |
tgaaaatttgaataattgttacacttgttgagaaccactt |
258 |
Q |
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| T |
5715937 |
tgaaaatttgaataattgttacacttgttgagaaccactt |
5715976 |
T |
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