View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14934_low_9 (Length: 459)

Name: NF14934_low_9
Description: NF14934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14934_low_9
NF14934_low_9
[»] chr5 (62 HSPs)
chr5 (1-439)||(29232856-29233294)
chr5 (1-123)||(29236922-29237044)
chr5 (344-413)||(1996840-1996909)
chr5 (346-413)||(1996926-1996993)
chr5 (344-405)||(25772147-25772208)
chr5 (346-413)||(7724955-7725022)
chr5 (346-413)||(7725032-7725099)
chr5 (346-413)||(20019826-20019893)
chr5 (346-413)||(27314470-27314537)
chr5 (346-403)||(25772243-25772300)
chr5 (346-413)||(291876-291943)
chr5 (346-413)||(1100135-1100202)
chr5 (349-410)||(16899768-16899829)
chr5 (346-413)||(27314553-27314620)
chr5 (346-413)||(39035465-39035532)
chr5 (346-412)||(20518167-20518232)
chr5 (346-412)||(25408622-25408688)
chr5 (350-412)||(25792925-25792987)
chr5 (346-412)||(26300106-26300172)
chr5 (346-411)||(291785-291850)
chr5 (346-410)||(12646585-12646649)
chr5 (346-412)||(13356216-13356282)
chr5 (346-412)||(25408538-25408604)
chr5 (346-412)||(43506173-43506239)
chr5 (347-412)||(553953-554017)
chr5 (346-379)||(6763692-6763725)
chr5 (346-410)||(13157328-13157392)
chr5 (362-413)||(16899698-16899749)
chr5 (346-409)||(18033437-18033500)
chr5 (345-412)||(22650850-22650917)
chr5 (345-412)||(26141834-26141901)
chr5 (346-413)||(31963514-31963581)
chr5 (352-411)||(34867631-34867690)
chr5 (353-412)||(37870096-37870155)
chr5 (357-400)||(39035403-39035446)
chr5 (345-376)||(41180207-41180238)
chr5 (349-412)||(42013820-42013883)
chr5 (344-410)||(71252-71318)
chr5 (346-412)||(3851442-3851508)
chr5 (346-412)||(5259380-5259446)
chr5 (346-412)||(5777175-5777241)
chr5 (344-410)||(12750111-12750177)
chr5 (346-412)||(15712116-15712182)
chr5 (346-412)||(19531296-19531362)
chr5 (346-412)||(23914836-23914902)
chr5 (346-412)||(23914920-23914986)
chr5 (346-412)||(30780065-30780131)
chr5 (346-412)||(37944597-37944663)
chr5 (346-412)||(43446854-43446920)
chr5 (346-407)||(5259469-5259530)
chr5 (353-410)||(5984064-5984121)
chr5 (349-398)||(7330070-7330119)
chr5 (346-407)||(26141750-26141811)
chr5 (355-412)||(37944681-37944738)
chr5 (350-410)||(5504376-5504436)
chr5 (346-410)||(6763778-6763842)
chr5 (346-390)||(11171997-11172040)
chr5 (344-412)||(18033348-18033416)
chr5 (346-410)||(26300192-26300256)
chr5 (350-413)||(40100164-40100228)
chr5 (360-412)||(41814449-41814501)
chr5 (348-412)||(43506104-43506168)
[»] chr1 (62 HSPs)
chr1 (346-413)||(47764-47831)
chr1 (346-413)||(29302059-29302126)
chr1 (346-413)||(29302143-29302210)
chr1 (346-413)||(11989387-11989454)
chr1 (344-413)||(27936749-27936818)
chr1 (344-413)||(39075842-39075911)
chr1 (345-405)||(35156259-35156319)
chr1 (346-413)||(11989304-11989371)
chr1 (346-403)||(47681-47738)
chr1 (346-406)||(35156328-35156388)
chr1 (346-405)||(13043795-13043854)
chr1 (346-413)||(39075986-39076053)
chr1 (346-412)||(3384218-3384284)
chr1 (346-415)||(31008335-31008404)
chr1 (352-412)||(5431419-5431479)
chr1 (365-413)||(39075931-39075979)
chr1 (345-412)||(8258022-8258089)
chr1 (346-405)||(13043716-13043775)
chr1 (346-412)||(14214608-14214674)
chr1 (346-412)||(14418136-14418202)
chr1 (352-410)||(14891819-14891877)
chr1 (346-412)||(15351710-15351776)
chr1 (346-412)||(19175667-19175733)
chr1 (346-412)||(23944032-23944098)
chr1 (350-411)||(1409129-1409190)
chr1 (346-403)||(32914650-32914707)
chr1 (344-412)||(1602896-1602964)
chr1 (346-410)||(23398414-23398478)
chr1 (346-414)||(28725461-28725529)
chr1 (350-410)||(38834610-38834670)
chr1 (344-412)||(45115163-45115231)
chr1 (344-412)||(52923402-52923470)
chr1 (345-412)||(639878-639945)
chr1 (330-412)||(8984267-8984350)
chr1 (352-411)||(46906862-46906921)
chr1 (346-412)||(639794-639860)
chr1 (348-410)||(3013691-3013753)
chr1 (355-413)||(9902645-9902703)
chr1 (346-412)||(31008254-31008320)
chr1 (346-412)||(33604070-33604136)
chr1 (346-412)||(36040141-36040207)
chr1 (346-412)||(38468681-38468747)
chr1 (346-412)||(39216098-39216164)
chr1 (346-412)||(48022590-48022656)
chr1 (346-412)||(48022674-48022740)
chr1 (346-412)||(48083499-48083565)
chr1 (346-412)||(52923318-52923384)
chr1 (346-411)||(1035967-1036032)
chr1 (346-407)||(33939381-33939442)
chr1 (343-412)||(35367557-35367626)
chr1 (346-411)||(37734853-37734918)
chr1 (356-397)||(44673979-44674020)
chr1 (346-407)||(45115254-45115315)
chr1 (346-390)||(4060272-4060316)
chr1 (352-412)||(5431342-5431402)
chr1 (344-376)||(6283528-6283560)
chr1 (346-406)||(13983200-13983260)
chr1 (352-412)||(14958682-14958742)
chr1 (351-411)||(24981921-24981981)
chr1 (344-412)||(31998182-31998250)
chr1 (344-412)||(33603984-33604052)
chr1 (346-410)||(42761448-42761512)
[»] chr7 (58 HSPs)
chr7 (346-413)||(2360444-2360511)
chr7 (346-413)||(8571460-8571527)
chr7 (346-413)||(12171237-12171304)
chr7 (346-413)||(28285467-28285534)
chr7 (346-411)||(2297326-2297391)
chr7 (346-414)||(10422885-10422953)
chr7 (346-413)||(8595225-8595292)
chr7 (346-413)||(46648340-46648407)
chr7 (344-405)||(8571375-8571436)
chr7 (346-413)||(12171320-12171387)
chr7 (346-413)||(16777887-16777954)
chr7 (349-412)||(22281883-22281946)
chr7 (346-410)||(26824901-26824965)
chr7 (346-413)||(8595142-8595209)
chr7 (346-413)||(10422803-10422870)
chr7 (346-412)||(2360528-2360594)
chr7 (346-410)||(6585991-6586055)
chr7 (349-413)||(43813123-43813187)
chr7 (346-402)||(46648716-46648772)
chr7 (345-412)||(10095713-10095780)
chr7 (346-413)||(23797343-23797410)
chr7 (346-412)||(9555339-9555405)
chr7 (343-405)||(26825004-26825066)
chr7 (350-414)||(34840613-34840677)
chr7 (353-413)||(46944015-46944075)
chr7 (346-413)||(8561188-8561255)
chr7 (345-412)||(18234424-18234491)
chr7 (346-409)||(21886462-21886525)
chr7 (346-412)||(38238778-38238845)
chr7 (346-412)||(1706828-1706894)
chr7 (346-412)||(25245222-25245288)
chr7 (346-412)||(38238863-38238929)
chr7 (345-410)||(15051077-15051142)
chr7 (356-413)||(37491278-37491335)
chr7 (345-378)||(40416900-40416933)
chr7 (346-410)||(5950275-5950339)
chr7 (353-413)||(10981838-10981898)
chr7 (346-410)||(34703524-34703588)
chr7 (346-410)||(41404010-41404074)
chr7 (353-412)||(41872130-41872189)
chr7 (362-412)||(716313-716363)
chr7 (352-410)||(2297412-2297470)
chr7 (346-412)||(2943207-2943273)
chr7 (346-412)||(6455628-6455694)
chr7 (353-411)||(7701190-7701248)
chr7 (346-412)||(25079202-25079268)
chr7 (346-407)||(6455544-6455605)
chr7 (347-412)||(21096183-21096248)
chr7 (346-411)||(43103067-43103132)
chr7 (348-413)||(44416529-44416594)
chr7 (346-410)||(6847271-6847335)
chr7 (346-410)||(8447712-8447776)
chr7 (356-412)||(22106672-22106728)
chr7 (353-413)||(23029200-23029263)
chr7 (346-410)||(23797429-23797493)
chr7 (346-406)||(24935887-24935947)
chr7 (350-378)||(34703442-34703470)
chr7 (356-412)||(40529623-40529679)
[»] chr4 (61 HSPs)
chr4 (346-413)||(28702056-28702123)
chr4 (353-413)||(21859484-21859544)
chr4 (353-413)||(21915347-21915407)
chr4 (346-413)||(28702139-28702206)
chr4 (346-413)||(17655140-17655207)
chr4 (347-412)||(3511788-3511853)
chr4 (346-403)||(34134591-34134648)
chr4 (344-412)||(54508162-54508230)
chr4 (350-412)||(2253953-2254015)
chr4 (346-412)||(8826860-8826926)
chr4 (346-412)||(16040040-16040105)
chr4 (346-412)||(39533835-39533901)
chr4 (346-412)||(54164892-54164958)
chr4 (349-410)||(20294512-20294573)
chr4 (346-411)||(55087791-55087856)
chr4 (365-413)||(6087511-6087559)
chr4 (345-409)||(27537050-27537114)
chr4 (344-403)||(17655044-17655103)
chr4 (346-412)||(19934717-19934783)
chr4 (346-412)||(29006830-29006896)
chr4 (346-412)||(33558876-33558942)
chr4 (365-414)||(11796661-11796710)
chr4 (345-410)||(12912603-12912668)
chr4 (349-410)||(19878145-19878206)
chr4 (351-412)||(38381976-38382037)
chr4 (346-407)||(54713093-54713154)
chr4 (349-417)||(20788034-20788102)
chr4 (344-412)||(52817646-52817714)
chr4 (346-409)||(26920667-26920730)
chr4 (355-410)||(46518501-46518556)
chr4 (346-413)||(52281113-52281180)
chr4 (345-412)||(54106469-54106536)
chr4 (346-412)||(4406236-4406302)
chr4 (346-412)||(5281214-5281280)
chr4 (346-412)||(5418594-5418660)
chr4 (346-412)||(13689615-13689681)
chr4 (339-413)||(16912427-16912501)
chr4 (346-412)||(19934633-19934699)
chr4 (346-376)||(21884134-21884164)
chr4 (348-410)||(23568461-23568523)
chr4 (354-412)||(24156218-24156276)
chr4 (356-410)||(35425257-35425311)
chr4 (354-412)||(54106554-54106612)
chr4 (346-412)||(54164808-54164874)
chr4 (352-413)||(2582809-2582870)
chr4 (383-412)||(12672524-12672553)
chr4 (346-407)||(56328534-56328595)
chr4 (344-412)||(16468197-16468265)
chr4 (365-412)||(18626723-18626768)
chr4 (348-412)||(20215564-20215628)
chr4 (349-413)||(21859560-21859624)
chr4 (349-413)||(21915423-21915487)
chr4 (365-413)||(26636518-26636566)
chr4 (346-410)||(33693964-33694028)
chr4 (346-410)||(36072565-36072629)
chr4 (351-411)||(39160894-39160954)
chr4 (351-411)||(47181559-47181619)
chr4 (351-411)||(48402491-48402551)
chr4 (356-412)||(52914077-52914133)
chr4 (346-410)||(55935983-55936046)
chr4 (351-411)||(56364406-56364466)
[»] chr3 (54 HSPs)
chr3 (346-414)||(22456257-22456325)
chr3 (346-413)||(40470496-40470563)
chr3 (344-413)||(40470411-40470480)
chr3 (350-413)||(17109263-17109326)
chr3 (346-412)||(26244459-26244525)
chr3 (346-412)||(26121618-26121684)
chr3 (346-412)||(43818857-43818923)
chr3 (346-410)||(331879-331943)
chr3 (346-402)||(26143537-26143593)
chr3 (346-410)||(27224661-27224725)
chr3 (346-412)||(7981224-7981290)
chr3 (346-412)||(22496946-22497012)
chr3 (346-412)||(27224575-27224641)
chr3 (348-410)||(30578303-30578365)
chr3 (355-413)||(36571379-36571437)
chr3 (344-410)||(37897675-37897741)
chr3 (346-412)||(38455160-38455226)
chr3 (344-410)||(47334723-47334789)
chr3 (346-412)||(51239322-51239388)
chr3 (346-412)||(52168278-52168344)
chr3 (346-407)||(12047328-12047389)
chr3 (346-410)||(7882276-7882340)
chr3 (346-410)||(10872753-10872817)
chr3 (351-411)||(21217166-21217226)
chr3 (344-412)||(38455244-38455312)
chr3 (346-410)||(54595871-54595934)
chr3 (346-412)||(5919427-5919494)
chr3 (346-417)||(7601909-7601980)
chr3 (344-407)||(8439342-8439405)
chr3 (346-409)||(9170107-9170170)
chr3 (345-412)||(25881215-25881282)
chr3 (357-400)||(34063761-34063804)
chr3 (349-412)||(40639788-40639851)
chr3 (353-412)||(43818932-43818991)
chr3 (346-412)||(2128440-2128506)
chr3 (346-412)||(12744980-12745046)
chr3 (346-412)||(26367466-26367532)
chr3 (346-412)||(26367554-26367620)
chr3 (346-412)||(36362683-36362748)
chr3 (344-414)||(41254008-41254078)
chr3 (346-412)||(48191710-48191776)
chr3 (346-412)||(52168362-52168428)
chr3 (346-412)||(52215959-52216025)
chr3 (356-413)||(611587-611644)
chr3 (344-413)||(26143464-26143533)
chr3 (383-412)||(26243758-26243787)
chr3 (346-407)||(38677560-38677621)
chr3 (346-378)||(17552472-17552504)
chr3 (350-410)||(26104773-26104833)
chr3 (346-378)||(29565222-29565254)
chr3 (350-410)||(34327589-34327649)
chr3 (353-409)||(36566717-36566773)
chr3 (345-413)||(39964289-39964357)
chr3 (346-378)||(41349655-41349687)
[»] chr8 (45 HSPs)
chr8 (346-413)||(92916-92983)
chr8 (349-412)||(13029393-13029456)
chr8 (346-413)||(42749050-42749117)
chr8 (346-413)||(17087350-17087417)
chr8 (351-413)||(17087425-17087487)
chr8 (346-413)||(92838-92905)
chr8 (346-413)||(9878910-9878977)
chr8 (362-413)||(13029338-13029389)
chr8 (346-415)||(1739641-1739710)
chr8 (348-413)||(9878993-9879058)
chr8 (345-409)||(23627660-23627724)
chr8 (346-410)||(24287780-24287844)
chr8 (346-413)||(33070160-33070227)
chr8 (346-409)||(40640273-40640336)
chr8 (345-412)||(10934682-10934749)
chr8 (346-412)||(7484696-7484762)
chr8 (346-412)||(24053592-24053658)
chr8 (344-410)||(24287866-24287932)
chr8 (351-412)||(24820376-24820437)
chr8 (346-411)||(31810414-31810479)
chr8 (346-410)||(2296469-2296533)
chr8 (352-412)||(6260610-6260670)
chr8 (344-412)||(7410644-7410712)
chr8 (348-412)||(29424062-29424126)
chr8 (346-410)||(33070246-33070310)
chr8 (345-412)||(5888330-5888397)
chr8 (346-417)||(44521322-44521393)
chr8 (346-412)||(9056016-9056082)
chr8 (346-412)||(9056100-9056166)
chr8 (356-405)||(9232538-9232588)
chr8 (346-412)||(13211318-13211384)
chr8 (346-412)||(14381233-14381299)
chr8 (346-412)||(15936198-15936264)
chr8 (346-412)||(31505117-31505183)
chr8 (346-412)||(34326240-34326306)
chr8 (346-412)||(40098755-40098821)
chr8 (346-412)||(40098839-40098905)
chr8 (351-412)||(1897858-1897919)
chr8 (346-407)||(13496519-13496580)
chr8 (346-410)||(7484613-7484676)
chr8 (346-410)||(10117051-10117115)
chr8 (346-390)||(13211234-13211278)
chr8 (350-410)||(17871762-17871822)
chr8 (357-412)||(21435748-21435804)
chr8 (344-412)||(41387841-41387909)
[»] chr2 (44 HSPs)
chr2 (346-413)||(20057184-20057251)
chr2 (346-412)||(31102028-31102094)
chr2 (349-413)||(23992454-23992518)
chr2 (362-413)||(25899849-25899900)
chr2 (346-412)||(21488106-21488172)
chr2 (346-412)||(23378021-23378087)
chr2 (346-412)||(43426707-43426773)
chr2 (346-391)||(4817091-4817136)
chr2 (346-410)||(15119858-15119922)
chr2 (346-414)||(20057101-20057169)
chr2 (346-410)||(41805355-41805419)
chr2 (362-413)||(25899916-25899967)
chr2 (350-413)||(44274619-44274682)
chr2 (346-412)||(5574189-5574255)
chr2 (346-412)||(15119772-15119838)
chr2 (346-412)||(24457095-24457161)
chr2 (346-412)||(38465784-38465850)
chr2 (346-412)||(38594423-38594489)
chr2 (346-412)||(38598019-38598085)
chr2 (346-412)||(45473072-45473138)
chr2 (346-407)||(19612936-19612997)
chr2 (351-411)||(3098206-3098266)
chr2 (346-413)||(12242318-12242385)
chr2 (351-411)||(25270936-25270996)
chr2 (346-413)||(3123981-3124048)
chr2 (345-412)||(3887912-3887979)
chr2 (346-405)||(23992370-23992429)
chr2 (346-412)||(9431192-9431258)
chr2 (346-412)||(11726574-11726640)
chr2 (346-412)||(26229524-26229590)
chr2 (346-412)||(32316413-32316479)
chr2 (383-413)||(32630484-32630514)
chr2 (346-412)||(38618177-38618243)
chr2 (346-412)||(45035862-45035928)
chr2 (355-412)||(1981063-1981120)
chr2 (345-410)||(23143567-23143632)
chr2 (345-410)||(23555357-23555422)
chr2 (346-407)||(26234108-26234169)
chr2 (354-411)||(41056968-41057025)
chr2 (346-410)||(8510586-8510650)
chr2 (346-410)||(13994271-13994334)
chr2 (351-415)||(22373610-22373674)
chr2 (356-412)||(38181765-38181821)
chr2 (346-410)||(41805269-41805333)
[»] chr6 (32 HSPs)
chr6 (346-412)||(14310600-14310666)
chr6 (346-412)||(21506542-21506608)
chr6 (345-414)||(13462927-13462996)
chr6 (346-409)||(8146031-8146094)
chr6 (341-412)||(17773580-17773651)
chr6 (346-412)||(13277101-13277167)
chr6 (346-407)||(6560741-6560802)
chr6 (343-412)||(15836531-15836600)
chr6 (347-412)||(30460692-30460757)
chr6 (346-410)||(15517086-15517149)
chr6 (344-412)||(31398219-31398287)
chr6 (344-412)||(32254900-32254968)
chr6 (346-410)||(34379731-34379794)
chr6 (346-376)||(2988794-2988824)
chr6 (346-412)||(3012439-3012505)
chr6 (346-412)||(6560652-6560718)
chr6 (346-412)||(7158251-7158317)
chr6 (346-412)||(13276481-13276547)
chr6 (346-412)||(15517169-15517235)
chr6 (346-412)||(18886303-18886369)
chr6 (346-412)||(21506458-21506524)
chr6 (346-412)||(29215522-29215588)
chr6 (346-412)||(30397803-30397869)
chr6 (346-412)||(31536306-31536372)
chr6 (346-412)||(33053760-33053826)
chr6 (356-413)||(14173395-14173452)
chr6 (356-413)||(14177931-14177988)
chr6 (353-410)||(24111180-24111237)
chr6 (351-412)||(26527269-26527330)
chr6 (346-407)||(31398310-31398371)
chr6 (344-412)||(5571514-5571582)
chr6 (350-410)||(11073546-11073605)
[»] scaffold0024 (2 HSPs)
scaffold0024 (346-412)||(120224-120290)
scaffold0024 (346-412)||(120140-120206)
[»] scaffold0149 (1 HSPs)
scaffold0149 (347-412)||(24685-24750)
[»] scaffold0536 (1 HSPs)
scaffold0536 (345-412)||(4029-4096)
[»] scaffold0007 (2 HSPs)
scaffold0007 (346-410)||(246876-246940)
scaffold0007 (346-412)||(246790-246856)
[»] scaffold0015 (1 HSPs)
scaffold0015 (346-412)||(17314-17378)
[»] scaffold0059 (1 HSPs)
scaffold0059 (346-412)||(4452-4518)
[»] scaffold0050 (1 HSPs)
scaffold0050 (346-412)||(6292-6358)
[»] scaffold0047 (1 HSPs)
scaffold0047 (346-412)||(61158-61224)
[»] scaffold0020 (1 HSPs)
scaffold0020 (346-412)||(139375-139441)
[»] scaffold0113 (1 HSPs)
scaffold0113 (383-411)||(40485-40513)
[»] scaffold0039 (1 HSPs)
scaffold0039 (346-410)||(54383-54447)


Alignment Details
Target: chr5 (Bit Score: 427; Significance: 0; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 1 - 439
Target Start/End: Complemental strand, 29233294 - 29232856
Alignment:
Q  1 gaaggctgcacaagaagctttgttgacaagggccaaggctaattctgaggctactcttggaacttacaagggtaactctaaacttggtgctggtgcatca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29233294 gaaggctgcacaagaagctttgttgacaagggccaaggctaattctgaggctactcttggaacttacaagggtaactctaaacttggtgctggtgcatca 29233195  T
Q  101 gagagtcttcatgttaaggactatatgtactgatcaaattgttggtgtgtgtatccctttgagactagaagagggttgaatttcttgtttatgattatcg 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29233194 gagagtcttcatgttaaggactataagtactgatcaaattgttggtgtgtgtatcccttagagactagaagagggttgaatttcttgtttatgattatcg 29233095  T
Q  201 tggctttgttaccgtagtttgttatttatacccccatcctaaattaatccataattgaatttggtttaacatatagtacatatatattttaaaacaaatg 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29233094 tggctttgttaccgtagtttgttatttatacccccatcctaaattaatccataattgaatttggtttaacatatagtacatatatattttaaaacaaatg 29232995  T
Q  301 tcgttcgaactaataacttcttgaaaattcttgttattttgagactacaccctccggtcattaatataagcaaaaatttgatttttagatttattcatta 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29232994 tcgttcgaactaataacttcttgaaaattcttgttattttgagactacaccctccggtcattaatataagcaaagatttgatttttagatttattcatta 29232895  T
Q  401 aatgatgtatgtaactttataaatttattttgaacctat 439  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29232894 aatgatgtatgtaactttataaatttattttgaacctat 29232856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 29237044 - 29236922
Alignment:
Q  1 gaaggctgcacaagaagctttgttgacaagggccaaggctaattctgaggctactcttggaacttacaagggtaactctaaacttggtgctggtgcatca 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  29237044 gaaggctgcacaagaagctttgttgacaagggctaaggctaactctgaggctactcttggaacttacaagggtaactccaaacttggtgctggtgcctca 29236945  T
Q  101 gagagtcttcatgttaaggacta 123  Q
    |||||||||||||||||||||||    
T  29236944 gagagtcttcatgttaaggacta 29236922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 1996840 - 1996909
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  1996840 actacaccctccggtcactaatataagcaaaaatttgatttttagattcattcattaaatgacgtatgta 1996909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 1996993 - 1996926
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  1996993 tacaccctccggtcactaatataagcaaaaatttgatttttagattcattcattaaatgacgtatgta 1996926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 344 - 405
Target Start/End: Original strand, 25772147 - 25772208
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatga 405  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  25772147 actacaccctccggtcactaatataagcaaaaatttgatttttagattcattcattaaatga 25772208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 7724955 - 7725022
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| |||||||    
T  7724955 tacaccctccggtcattaatataagcaaaagtttgatttttaggttcattcattaaatgacgtatgta 7725022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 7725099 - 7725032
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| |||||||    
T  7725099 tacaccctccggtcattaatataagcaaaagtttgatttttaggttcattcattaaatgacgtatgta 7725032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 20019893 - 20019826
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  20019893 tacaccctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgacgtatgta 20019826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 27314470 - 27314537
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  27314470 tacaccctccggtcactaatataagcaaaaatttggtttttagattcattcattaaatgacgtatgta 27314537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 346 - 403
Target Start/End: Complemental strand, 25772300 - 25772243
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaat 403  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||    
T  25772300 tacaccctccggtcactaatataagcaaaagtttgatttttagattcattcattaaat 25772243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 291943 - 291876
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||| | |||||||| ||||| ||||||||||||||| ||||||||||||| |||||||    
T  291943 tacaccctccggttactaatataaacaaaagtttgatttttagattcattcattaaatgacgtatgta 291876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 1100202 - 1100135
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||| |||| ||||||||||| ||||  ||||||||| |||||||||||||||||||||    
T  1100202 tacaccctccggtaattattataagcaaaactttgcattttagattaattcattaaatgatgtatgta 1100135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 16899829 - 16899768
Alignment:
Q  349 accctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||| |||||| |||||||||||||| |||||||||||| || ||||||||||||||||||    
T  16899829 acccttcggtcactaatataagcaaaagtttgatttttaggttcattcattaaatgatgtat 16899768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 27314620 - 27314553
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||||||  ||||||||||||| ||||  ||||||||| ||||||||||||| |||||||    
T  27314620 tacaccctccggtcacaaatataagcaaaagtttggattttagattcattcattaaatgacgtatgta 27314553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 39035532 - 39035465
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||| | |||| |||||||||||||||||||||||||| ||| ||||||||||| || ||||||    
T  39035532 tacacccttcagtcactaatataagcaaaaatttgatttttaaattcattcattaaataatatatgta 39035465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 20518167 - 20518232
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||||||||||||| ||||| |  | ||||||||||||||||| ||||||||||||    
T  20518167 tacaccctccggtcattaatataagaaaaaactaca-ttttagatttattcatttaatgatgtatgt 20518232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 25408688 - 25408622
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| ||||||||| |||||||||||||||||   ||||||||| ||||| ||||||||||||||    
T  25408688 tacaccatccggtcataaatataagcaaaaatttatgttttagattcattcaataaatgatgtatgt 25408622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 412
Target Start/End: Complemental strand, 25792987 - 25792925
Alignment:
Q  350 ccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||| || |||||||||||||||  ||||||| || ||||||||||||||||||||    
T  25792987 ccctccggtcactattataagcaaaaatttactttttaggttcattcattaaatgatgtatgt 25792925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 26300106 - 26300172
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||  ||||| | ||||||||||||    
T  26300106 tacaccctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgt 26300172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 411
Target Start/End: Original strand, 291785 - 291850
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    |||| ||||| ||||||||||||| ||||| ||||||||||| ||| ||||||||||||| |||||    
T  291785 tacatcctcctgtcattaatataaacaaaagtttgatttttacattcattcattaaatgacgtatg 291850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 12646649 - 12646585
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||| ||||||||||| |||||||||||||||||  |||||||||| ||| | ||||||||||||    
T  12646649 tacatcctccggtcataaatataagcaaaaatttactttttagattcatttaataaatgatgtat 12646585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 13356282 - 13356216
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||||| ||||||||||||| |  ||||||  || ||||| ||||||||||||||    
T  13356282 tacaccctccggtcattattataagcaaaaatctactttttaagttcattcaataaatgatgtatgt 13356216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 25408538 - 25408604
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||  ||||||||||||||||    ||||||||| ||||| ||||||||||||||    
T  25408538 tacaccctccggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgtatgt 25408604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 43506239 - 43506173
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||| ||||| || ||||||||||| ||   |||||||||| ||||||||||||||||||||    
T  43506239 tacaccctctggtcactattataagcaaaatttcactttttagattcattcattaaatgatgtatgt 43506173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 412
Target Start/End: Complemental strand, 554017 - 553953
Alignment:
Q  347 acaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||| || |||||| ||||||||||||||| ||||||||||||||||| ||||| || |||||    
T  554017 acacccttcgatcattattataagcaaaaattt-atttttagatttattcaataaataatatatgt 553953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 379
Target Start/End: Original strand, 6763692 - 6763725
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaattt 379  Q
    ||||||||||||||||||||||||||||||||||    
T  6763692 tacaccctccggtcattaatataagcaaaaattt 6763725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 13157328 - 13157392
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||| |||||||||||||||||||||||||||    ||||||||| |||||| | ||||||||||    
T  13157328 tacatcctccggtcattaatataagcaaaaatccactttttagatatattcaattaatgatgtat 13157392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 413
Target Start/End: Original strand, 16899698 - 16899749
Alignment:
Q  362 taatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||| ||||| ||||||||||||||| ||| ||||||||| |||||||    
T  16899698 taatataaacaaaagtttgatttttagattcatttattaaatgacgtatgta 16899749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 409
Target Start/End: Complemental strand, 18033500 - 18033437
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgta 409  Q
    |||| |||||||||| || ||||||||||||| |   ||||||||||||||||| |||||||||    
T  18033500 tacatcctccggtcactattataagcaaaaatctacattttagatttattcatttaatgatgta 18033437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 412
Target Start/End: Original strand, 22650850 - 22650917
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||| ||| |||| |||| ||||||||||| ||||  ||||||||| ||| ||||||||||||||||    
T  22650850 ctacatccttcggttattattataagcaaaattttgtattttagattcatttattaaatgatgtatgt 22650917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 26141901 - 26141834
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||| |||||||||||||||  |   || |||||| ||||||| ||||||||||||    
T  26141901 ctacaccctccggtcactaatataagcaaaaaactatattctagattcattcatttaatgatgtatgt 26141834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 31963514 - 31963581
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||| |||||||| || ||||| ||||| ||||  ||||||||| ||| |||||||||||||||||    
T  31963514 tacaccttccggtcactattataaacaaaattttgcattttagattcatttattaaatgatgtatgta 31963581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 411
Target Start/End: Complemental strand, 34867690 - 34867631
Alignment:
Q  352 ctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    ||||||||| ||||||||| |||| ||||  ||||||||| ||| |||||||||||||||    
T  34867690 ctccggtcactaatataagtaaaactttgcattttagattcatttattaaatgatgtatg 34867631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 412
Target Start/End: Complemental strand, 37870155 - 37870096
Alignment:
Q  353 tccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||| |||||||||||||||| | |||||||||| |||||| | ||||||| ||||    
T  37870155 tccggtcactaatataagcaaaaatctcatttttagatatattcaattaatgatgaatgt 37870096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 39035403 - 39035446
Alignment:
Q  357 gtcattaatataagcaaaaatttgatttttagatttattcatta 400  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||    
T  39035403 gtcattaatataatcaaaaatttgatttttagattcactcatta 39035446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 376
Target Start/End: Original strand, 41180207 - 41180238
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaa 376  Q
    ||||||||||||||||||||||||||||||||    
T  41180207 ctacaccctccggtcattaatataagcaaaaa 41180238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 42013820 - 42013883
Alignment:
Q  349 accctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||| |||||||||||||||||   |||||||||  ||||| | ||||||||||||    
T  42013820 accctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgt 42013883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 410
Target Start/End: Original strand, 71252 - 71318
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||||| || ||||||||||||| |   ||||||||| ||||| | ||||||||||    
T  71252 actacaccctccggtcactattataagcaaaaatctatattttagattcattcaattaatgatgtat 71318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 3851508 - 3851442
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||||   |||||||||  ||| | | ||||||||||||    
T  3851508 tacaccctccggtcactaatataagcaaaaattcattttttagatacatttaattaatgatgtatgt 3851442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 5259380 - 5259446
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||  |   |||||| || ||||||| ||||||||||||    
T  5259380 tacaccctccggtcactaatataagcaaaaaactatattttaggttcattcatttaatgatgtatgt 5259446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 5777175 - 5777241
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||| |||| |||||||||||||||||   ||||| ||||||||| |||||  |||||||    
T  5777175 tacaccctccgatcataaatataagcaaaaatttatgttttaaatttattcaataaatattgtatgt 5777241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 410
Target Start/End: Original strand, 12750111 - 12750177
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||||||||||||||||  ||||||| |||||||||   ||||||||  ||||| ||||||||||||    
T  12750111 actacaccctccggtcacaaatataaacaaaaatttatgttttagatacattcaataaatgatgtat 12750177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 15712116 - 15712182
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||| ||||||||||||||||||||||||||    |||||||||  ||||| | ||||||||||||    
T  15712116 tacactctccggtcattaatataagcaaaaatccattttttagatacattcaattaatgatgtatgt 15712182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 19531296 - 19531362
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||  ||||||||||||||||   |||||||||  ||||| | ||||||||||||    
T  19531296 tacaccctccggtcacaaatataagcaaaaattcactttttagatacattcaattaatgatgtatgt 19531362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 23914836 - 23914902
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||||    |||||||||  ||||| | ||||||||||||    
T  23914836 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgt 23914902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 23914986 - 23914920
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||||   |||| ||||  ||||||| || |||||||||    
T  23914986 tacaccctccggtcactaatataagcaaaaattcacttttaagatacattcatttaaggatgtatgt 23914920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 30780065 - 30780131
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| |||||| || ||||||||||||||||    ||||| ||||||||| ||||||||||||||    
T  30780065 tacaccatccggttataaatataagcaaaaattcatattttaaatttattcaataaatgatgtatgt 30780131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 37944597 - 37944663
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||| |||||||||| |||||||||||||||||   |||||||||  ||||| | ||||||||||||    
T  37944597 tacatcctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgt 37944663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 43446854 - 43446920
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||| | ||||||||||||||||||  |||||||||  ||| | | ||||||||||||    
T  43446854 tacaccctccggttactaatataagcaaaaatttactttttagatacatttaattaatgatgtatgt 43446920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 407
Target Start/End: Complemental strand, 5259530 - 5259469
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||||||| |||||||||||||||  |   ||||||||| ||||||| |||||||    
T  5259530 tacaccctccggtcactaatataagcaaaaaactacattttagattcattcatttaatgatg 5259469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 410
Target Start/End: Complemental strand, 5984121 - 5984064
Alignment:
Q  353 tccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||| ||||||||||| ||||  ||||||||| ||||| | ||||||||||    
T  5984121 tccggtcattattataagcaaaactttgcattttagattcattcaattaatgatgtat 5984064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 398
Target Start/End: Complemental strand, 7330119 - 7330070
Alignment:
Q  349 accctccggtcattaatataagcaaaaatttgatttttagatttattcat 398  Q
    ||||||||||||||| ||||||||||| ||||  ||||||||| ||||||    
T  7330119 accctccggtcattattataagcaaaactttgcattttagattcattcat 7330070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 407
Target Start/End: Original strand, 26141750 - 26141811
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||||||| || ||||||||||| |||   ||||||||| ||||||| |||||||    
T  26141750 tacaccctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatg 26141811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 412
Target Start/End: Complemental strand, 37944738 - 37944681
Alignment:
Q  355 cggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| ||||||||||||||||||  |||||||||  ||||| | ||||||||||||    
T  37944738 cggtcactaatataagcaaaaatttattttttagatacattcaattaatgatgtatgt 37944681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 410
Target Start/End: Original strand, 5504376 - 5504436
Alignment:
Q  350 ccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||||||| || || ||||||||||| ||||  ||||| ||| ||||||||||||||||||    
T  5504376 ccctccgggcactattataagcaaaattttgtattttaaattcattcattaaatgatgtat 5504436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 6763842 - 6763778
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| ||||||||||||||||    ||| |||||| ||||| | ||||||||||    
T  6763842 tacaccctccggtcactaatataagcaaaaatccattttctagattcattcaattaatgatgtat 6763778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 11171997 - 11172040
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagat 390  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||    
T  11171997 tacatcctccggtcactaatataagcaaaaattt-atttttagat 11172040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 18033348 - 18033416
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||||| | |||||||||||||  |   |||||| || ||||||| ||||||||||||    
T  18033348 actacaccctccggtcactgatataagcaaaaaactatattttaggttcattcatttaatgatgtatgt 18033416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 26300256 - 26300192
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| ||||||||| |||| |||  |||||||||  ||||| | ||||||||||    
T  26300256 tacaccctccggtcactaatataagtaaaattttactttttagatacattcaattaatgatgtat 26300192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 40100228 - 40100164
Alignment:
Q  350 ccctccggtcattaatataagcaaaaatt-tgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||| || ||||||||||||||    |||||||||| ||||| |||||||||||||||    
T  40100228 ccctccggtcactattataagcaaaaattcatttttttagattcattcagtaaatgatgtatgta 40100164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 41814501 - 41814449
Alignment:
Q  360 attaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||| |||||| |||| ||||  ||||||||||||| ||||||||||||||||    
T  41814501 attactataagtaaaagtttgcattttagatttatttattaaatgatgtatgt 41814449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 43506104 - 43506168
Alignment:
Q  348 caccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||| ||||| || ||||||||||| ||   |||||||||| | ||||||||||||||||||    
T  43506104 caccctcgggtcactattataagcaaaatttcactttttagattcaatcattaaatgatgtatgt 43506168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 47831 - 47764
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  47831 tacaccctccggtcattaatataagcaaaactttgatttttagattcattcattaaatgatgtatgta 47764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 29302059 - 29302126
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  29302059 tacaccctccggtcactaatataagcaaaaatttgatttttagattcattcattaaatgacgtatgta 29302126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 29302210 - 29302143
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  29302210 tacaccctccggtcactaatataagcaaaaatttgatttttagattcattcattaaatgacgtatgta 29302143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 11989454 - 11989387
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||| |||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  11989454 tacaccatccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgatgtatgta 11989387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 27936818 - 27936749
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||| ||| ||||||||| |||||||    
T  27936818 actacaccctccagtcactaatataagcaaaaaattgatttttagattcatttattaaatgacgtatgta 27936749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 39075842 - 39075911
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||| ||||| || ||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  39075842 actacaccctctggtcactagtataagcaaaagtttgaattttagattcattcattaaatgatgtatgta 39075911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 405
Target Start/End: Original strand, 35156259 - 35156319
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatga 405  Q
    |||||||||||||||| |||||||| ||||||||| ||||||||||| |||||||||||||    
T  35156259 ctacaccctccggtcactaatataaacaaaaattttatttttagattcattcattaaatga 35156319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 11989304 - 11989371
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| | |||||||||||| |||||||||||| || ||||||||||||| |||||||    
T  11989304 tacaccctccggtcactgatataagcaaaagtttgatttttaggttcattcattaaatgacgtatgta 11989371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 403
Target Start/End: Original strand, 47681 - 47738
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaat 403  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||| |||||||||||    
T  47681 tacaccctccggtcactaatataagtaaaattttgatttttagattcattcattaaat 47738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 406
Target Start/End: Complemental strand, 35156388 - 35156328
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgat 406  Q
    |||||| |||||||| |||||||||||||| ||| ||||||||||| ||||||||||||||    
T  35156388 tacaccatccggtcactaatataagcaaaagttttatttttagattcattcattaaatgat 35156328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 405
Target Start/End: Complemental strand, 13043854 - 13043795
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatga 405  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||||| ||| |||||||||    
T  13043854 tacaccctccgatcactaatataagcaaaagtttgatttttagattcatttattaaatga 13043795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 39076053 - 39075986
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||| |||| ||||| || ||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  39076053 tacatcctcgggtcactagtataagcaaaagtttgaattttagattcattcattaaatgatgtatgta 39075986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 3384218 - 3384284
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||||||||||||||||||||   |||||||||  ||||| | ||||||||||||    
T  3384218 tacaccctccggtcattaatataagcaaaaattcactttttagatacattcaattaatgatgtatgt 3384284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 415
Target Start/End: Complemental strand, 31008404 - 31008335
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgtaac 415  Q
    ||||||||||||||||||||||||||||||||    |||||||||  ||||| | |||||||||||||||    
T  31008404 tacaccctccggtcattaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtaac 31008335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 412
Target Start/End: Complemental strand, 5431479 - 5431419
Alignment:
Q  352 ctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||| |||||||||||||||||   |||||||||| ||||| ||||||||||||||    
T  5431479 ctccggtcactaatataagcaaaaattaactttttagattcattcaataaatgatgtatgt 5431419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 39075931 - 39075979
Alignment:
Q  365 tataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  39075931 tataagcaaaagtttgaattttagattcattcattaaatgatgtatgta 39075979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 8258089 - 8258022
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||| |||||||||||||||||   |||||||||  ||||| | ||||||||||||    
T  8258089 ctacaccctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgt 8258022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 405
Target Start/End: Original strand, 13043716 - 13043775
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatga 405  Q
    |||||| |||||||| |||||||| ||||| ||||||||||||||| ||| |||||||||    
T  13043716 tacaccttccggtcactaatataaacaaaagtttgatttttagattcatttattaaatga 13043775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 14214674 - 14214608
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || |||||||||||| ||  ||||||| || ||||| ||||||||||||||    
T  14214674 tacaccctccggtcactattataagcaaaaacttactttttaggttcattcaataaatgatgtatgt 14214608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 14418202 - 14418136
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||||||||||||||||||||   |||||||||  |||||   ||||||||||||    
T  14418202 tacaccctccggtcattaatataagcaaaaattcactttttagatacattcaactaatgatgtatgt 14418136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 410
Target Start/End: Complemental strand, 14891877 - 14891819
Alignment:
Q  352 ctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||| || ||||||||||||||| | |||||||||||| || ||||||||||||    
T  14891877 ctccggtcactattataagcaaaaatttaaattttagatttatccaataaatgatgtat 14891819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 15351710 - 15351776
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||  |||||||||||||||||   ||||| ||| ||||| ||||||||||||||    
T  15351710 tacaccctccggtcacaaatataagcaaaaatttatattttaaattcattcaataaatgatgtatgt 15351776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 19175733 - 19175667
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||| |||| || ||||||||||||| |  |||||||||| ||||| ||||||||||||||    
T  19175733 tacaccctccagtcactattataagcaaaaatctactttttagattcattcaataaatgatgtatgt 19175667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 23944032 - 23944098
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||||   |||||||||  ||||| | ||||||||||||    
T  23944032 tacaccctccggtcactaatataagcaaaaattcattttttagatacattcaattaatgatgtatgt 23944098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 1409190 - 1409129
Alignment:
Q  350 ccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    ||||||||||| || ||||||||||||||   |||||||||| ||||| |||||||||||||    
T  1409190 ccctccggtcactattataagcaaaaattatctttttagattcattcaataaatgatgtatg 1409129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 403
Target Start/End: Complemental strand, 32914707 - 32914650
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaat 403  Q
    |||| |||||| |||| ||||||| ||||||||| ||||||||||| |||||||||||    
T  32914707 tacatcctccgatcatcaatataaacaaaaatttaatttttagattcattcattaaat 32914650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 412
Target Start/End: Complemental strand, 1602964 - 1602896
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||| |||| || ||||||||||||||   ||||||| || |||||||||||| |||||||    
T  1602964 actacaccctccagtcactattataagcaaaaattcattttttaggttcattcattaaatgttgtatgt 1602896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 23398414 - 23398478
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || |||||||||||| |    ||||||||| ||||||||||||||||||    
T  23398414 tacaccctccggtcactattataagcaaaaactaacattttagattcattcattaaatgatgtat 23398478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 28725461 - 28725529
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgtaa 414  Q
    ||||||||||||||| |||||||||||||||  |   |||||| || ||||||| ||||||||||||||    
T  28725461 tacaccctccggtcactaatataagcaaaaaactatattttaggttcattcatttaatgatgtatgtaa 28725529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 410
Target Start/End: Original strand, 38834610 - 38834670
Alignment:
Q  350 ccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||| || |||||||||||||||  |||||||||| ||| | ||||||||||||    
T  38834610 ccctccggtcactattataagcaaaaatttattttttagattcattaaataaatgatgtat 38834670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 45115163 - 45115231
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||| ||| |||||||||||||||| |   |||||| |||||||||| |||||| |||||    
T  45115163 actacaccctccgatcactaatataagcaaaaatctatattttaggtttattcatttaatgatatatgt 45115231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 412
Target Start/End: Complemental strand, 52923470 - 52923402
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||| ||||| || ||||||||||||| |  ||||||| || ||||| ||||||||||||||    
T  52923470 actacaccctcaggtcactattataagcaaaaatctactttttaggttcattcaataaatgatgtatgt 52923402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 639945 - 639878
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||| |||||||||||||||||   |||| ||||  ||||||| || |||||||||    
T  639945 ctacaccctccggtcactaatataagcaaaaattcacttttaagatacattcatttaaggatgtatgt 639878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 412
Target Start/End: Complemental strand, 8984350 - 8984267
Alignment:
Q  330 cttgttattttgagac-tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||| || ||||| ||||||||||||| |  |||||||||||||||| |  ||||||||| ||||| |||||||| |||||    
T  8984350 cttgttaattagagacatacaccctccggtgacaaatataagcaaaaattcgtattttagattcattcaataaatgatttatgt 8984267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 411
Target Start/End: Original strand, 46906862 - 46906921
Alignment:
Q  352 ctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    ||||||||| || ||||||||||||| |   ||||||||| |||||||||||||||||||    
T  46906862 ctccggtcactattataagcaaaaatctatattttagattcattcattaaatgatgtatg 46906921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 639794 - 639860
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||||    |||||||||  ||||| | ||||||||||||    
T  639794 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgt 639860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 3013753 - 3013691
Alignment:
Q  348 caccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||| || ||||||||||||||    ||||| ||| ||||||||||||||||||    
T  3013753 caccctccggtcactattataagcaaaaattaacattttacattcattcattaaatgatgtat 3013691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 9902703 - 9902645
Alignment:
Q  355 cggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||| || ||||||||||||||||||||||| | | ||||| |||||||| ||||||    
T  9902703 cggtcactactataagcaaaaatttgatttttaaagtcattcaataaatgatatatgta 9902645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 31008254 - 31008320
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||| |  |||||||||  ||| | | ||||||||||||    
T  31008254 tacaccctccggtcactaatataagcaaaaatctactttttagatacatttaattaatgatgtatgt 31008320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 33604136 - 33604070
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||||    |||||||||  ||||| | ||||||||||||    
T  33604136 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgt 33604070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 36040141 - 36040207
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||  |   |||||| || ||||||| ||||||||||||    
T  36040141 tacaccctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgt 36040207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 38468681 - 38468747
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||| ||||||||| ||| |||   ||||||||| ||||| ||||| ||||||||    
T  38468681 tacaccctccggtcataaatataagctaaattttatgttttagattcattcaataaataatgtatgt 38468747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 39216098 - 39216164
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || ||||||||||| ||||  ||||||| | ||||| | ||||||||||||    
T  39216098 tacaccctccggtcactattataagcaaaactttgcattttagactcattcaattaatgatgtatgt 39216164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 48022590 - 48022656
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||||    |||||||||  ||||| | ||||||||||||    
T  48022590 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgt 48022656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 48022740 - 48022674
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||||   |||| ||||  ||||||| || |||||||||    
T  48022740 tacaccctccggtcactaatataagcaaaaattcacttttaagatacattcatttaaggatgtatgt 48022674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 48083499 - 48083565
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||| ||||| || ||||||||||||||    |||||| || ||||||||||||||||||||    
T  48083499 tacaccctctggtcactattataagcaaaaattaatattttaggttcattcattaaatgatgtatgt 48083565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 52923318 - 52923384
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || ||||||||||| ||   ||||||| || ||||| ||||||||||||||    
T  52923318 tacaccctccggtcactattataagcaaaatttcactttttaggttcattcaataaatgatgtatgt 52923384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 411
Target Start/End: Complemental strand, 1036032 - 1035967
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    ||||||||||||||| |||||||||||||||||   ||| |||||| ||||| | |||||| ||||    
T  1036032 tacaccctccggtcactaatataagcaaaaattcactttctagattcattcaattaatgatttatg 1035967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 407
Target Start/End: Complemental strand, 33939442 - 33939381
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||||||| || ||||||||||| |||   ||||||||| ||||||| |||||||    
T  33939442 tacaccctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatg 33939381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 412
Target Start/End: Complemental strand, 35367626 - 35367557
Alignment:
Q  343 gactacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||||| || |||||||||||||    |||||||||  ||||| | ||||||||||||    
T  35367626 gactacaccctccggtcactactataagcaaaaatccattttttagatacattcaattaatgatgtatgt 35367557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 411
Target Start/End: Complemental strand, 37734918 - 37734853
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    ||||||||||||||| ||||||||||||||||    |||||||||  ||||| | |||||||||||    
T  37734918 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatg 37734853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 397
Target Start/End: Complemental strand, 44674020 - 44673979
Alignment:
Q  356 ggtcattaatataagcaaaaatttgatttttagatttattca 397  Q
    |||||||| ||||||||||||||| ||||||||||| |||||    
T  44674020 ggtcattattataagcaaaaatttaatttttagattcattca 44673979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 407
Target Start/End: Complemental strand, 45115315 - 45115254
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||||||| || ||||||||||||| |   ||||||||| ||||||| |||||||    
T  45115315 tacaccctccggtcactattataagcaaaaatctacattttagattcattcatttaatgatg 45115254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 4060316 - 4060272
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagat 390  Q
    ||||||||||||||| |||||||||||||||| |  |||||||||    
T  4060316 tacaccctccggtcactaatataagcaaaaatctactttttagat 4060272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 412
Target Start/End: Original strand, 5431342 - 5431402
Alignment:
Q  352 ctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||| || ||||||||||||||   |||||||||| ||||| ||||||| ||||||    
T  5431342 ctccggtcactattataagcaaaaattcactttttagattcattcaataaatgaagtatgt 5431402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 376
Target Start/End: Original strand, 6283528 - 6283560
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaa 376  Q
    ||||||||||||||||| |||||||||||||||    
T  6283528 actacaccctccggtcactaatataagcaaaaa 6283560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 406
Target Start/End: Original strand, 13983200 - 13983260
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgat 406  Q
    |||| |||||||||||||||||||| ||||||||  ||| |||||| ||||| | ||||||    
T  13983200 tacatcctccggtcattaatataagaaaaaatttattttctagattcattcaattaatgat 13983260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 412
Target Start/End: Original strand, 14958682 - 14958742
Alignment:
Q  352 ctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||  ||||||||||||| ||  | ||||||||| ||||| ||||||||||||||    
T  14958682 ctccggtcacaaatataagcaaaacttcaaattttagattcattcaataaatgatgtatgt 14958742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 24981981 - 24981921
Alignment:
Q  351 cctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    |||||||||| || |||||||||||||     ||||||||| |||||||||||||||||||    
T  24981981 cctccggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatg 24981921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 31998182 - 31998250
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| ||| |||||| || ||||||||||| ||||  ||||| ||| ||| ||||||||||||||||    
T  31998182 actacatccttcggtcactattataagcaaaactttgtattttatattcatttattaaatgatgtatgt 31998250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 33603984 - 33604052
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||||| |||||||| ||||||||   |||| ||||  ||||||| || |||||||||    
T  33603984 actacaccctccggtcactaatataaacaaaaattcacttttaagatacattcatttaaggatgtatgt 33604052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 42761448 - 42761512
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||||| ||||||||||| ||||||||||| |||   ||||||||| ||||| | ||||||||||    
T  42761448 tacaccttccggtcattattataagcaaaactttacattttagattcattcaattaatgatgtat 42761512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 2360444 - 2360511
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  2360444 tacaccctccggtcactaatataagcaaaaatttgatttttagattcattcattaaatgacgtatgta 2360511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 8571527 - 8571460
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  8571527 tacaccctccggtcactaatataagcaaaaatttgatttttaaattcattcattaaatgatgtatgta 8571460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 12171237 - 12171304
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||    
T  12171237 tacaccctccggtcattaatataagcaaaaatttgatttttagattcattcattaaataacgtatgta 12171304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 28285534 - 28285467
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  28285534 tacatcctccggtcattaatataagcaaaaatttgatttttaaattcattcattaaatgatgtatgta 28285467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 346 - 411
Target Start/End: Original strand, 2297326 - 2297391
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  2297326 tacaccctccggtcactaatataagcaaaaatttgatttttagattcattcattaaatgacgtatg 2297391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 10422953 - 10422885
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgtaa 414  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  10422953 tacaccctccggtcactaatataagcaaaaatttaatttttagattcattcattaaatgacgtatgtaa 10422885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 8595292 - 8595225
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| |||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  8595292 tacaccctccggtcactaatataagcaaaaatttgatttttgaattcattcattaaatgatgtatgta 8595225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 46648340 - 46648407
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||| ||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  46648340 tacatcctcctgtcactaatataagcaaaaatttgatttttagattcattcattaaatgatgtatgta 46648407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 405
Target Start/End: Original strand, 8571375 - 8571436
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatga 405  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  8571375 actacaccctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatga 8571436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 12171387 - 12171320
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  12171387 tacaccatccggtcactaatataagtaaaaatttgatttttagattcatttattaaatgatgtatgta 12171320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 16777887 - 16777954
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||| ||| |||||||||||||||||    
T  16777887 tacaccctccggtcactaatataagcaaaagtttaatttttagattcatttattaaatgatgtatgta 16777954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 412
Target Start/End: Complemental strand, 22281946 - 22281883
Alignment:
Q  349 accctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  22281946 accctccggtcattattataagcaaaactttgtattttagatttattcattaaatgatgtatgt 22281883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 26824901 - 26824965
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  26824901 tacaccctccggtcactagtataagcaaaaatttaatttttagattcattcattaaatgacgtat 26824965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 8595142 - 8595209
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||||||  |||||||| ||||||||  |||||||||| |||||||||||||||||||||    
T  8595142 tacaccctccggtcacaaatataagaaaaaatttattttttagattcattcattaaatgatgtatgta 8595209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 10422803 - 10422870
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||| |||| |||||||| |||||||    
T  10422803 tacatcctccggtcactaatataagcaaaaatttaatttttagattcattcgttaaatgacgtatgta 10422870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 2360594 - 2360528
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||||| | ||||||    
T  2360594 tacaccctccggtcactaatataaggaaaaatttgatttttagattcatttattaaataacgtatgt 2360528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 6585991 - 6586055
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| |||||||| ||||| |||||||||||| || ||||||||||||| ||||    
T  6585991 tacaccctccggtcactaatataaacaaaagtttgatttttagcttcattcattaaatgacgtat 6586055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 349 - 413
Target Start/End: Original strand, 43813123 - 43813187
Alignment:
Q  349 accctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||| || ||||||||||||||| ||||||||||| ||||| ||||||| |||||||    
T  43813123 accctccggtcactattataagcaaaaatttaatttttagattcattcaataaatgaagtatgta 43813187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 402
Target Start/End: Complemental strand, 46648772 - 46648716
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaa 402  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||||||    
T  46648772 tacaccctccggtcactaatataagcaaaattttgatttttagattcatttattaaa 46648716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 412
Target Start/End: Original strand, 10095713 - 10095780
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||| || ||||||||||||||    ||||||||| ||||||||||||||||||||    
T  10095713 ctacaccctccggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgt 10095780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 23797343 - 23797410
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||| |||||| || ||||||||||| ||||  ||||||||| |||||||||||||||||||||    
T  23797343 tacacccttcggtcactattataagcaaaattttgcattttagattcattcattaaatgatgtatgta 23797410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 9555405 - 9555339
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||| |||||||||||| ||||||||||| |||   ||||||||| ||||||||||||||||||||    
T  9555405 tacacactccggtcattattataagcaaaactttacattttagattcattcattaaatgatgtatgt 9555339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 343 - 405
Target Start/End: Complemental strand, 26825066 - 26825004
Alignment:
Q  343 gactacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatga 405  Q
    ||||||| |||||| ||| ||||||||| |||||||||||||||| ||| |||||||||||||    
T  26825066 gactacatcctccgatcactaatataagtaaaaatttgatttttaaattcattcattaaatga 26825004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 414
Target Start/End: Original strand, 34840613 - 34840677
Alignment:
Q  350 ccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgtaa 414  Q
    |||||||||||||| ||||||||||| ||   |||||||||| ||||| ||||||||||||||||    
T  34840613 ccctccggtcattattataagcaaaagttcactttttagattcattcaataaatgatgtatgtaa 34840677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 46944075 - 46944015
Alignment:
Q  353 tccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||||||||| |||||||| ||||||||||  ||||| | |||||||||||||    
T  46944075 tccggtcattaatataagtaaaaatttaatttttagatacattcaattaatgatgtatgta 46944015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 8561255 - 8561188
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||| |||| ||||||||  |||||||||||||||| ||| ||| ||||||| |||||||||    
T  8561255 tacaccctcctgtcactaatataaataaaaatttgatttttaaattcatttattaaataatgtatgta 8561188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 18234491 - 18234424
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| ||||||||| |||||||| ||||||||| ||||||||||  ||||| | ||||||||||||    
T  18234491 ctacactctccggtcactaatataaacaaaaatttaatttttagatacattcaattaatgatgtatgt 18234424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 409
Target Start/End: Original strand, 21886462 - 21886525
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgta 409  Q
    |||||||||||||||||| |||||||||||||||   ||||||||| ||||| | |||||||||    
T  21886462 tacaccctccggtcattattataagcaaaaatttatattttagattcattcaattaatgatgta 21886525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 38238778 - 38238845
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttga-tttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||||| | |||||||||  ||||| | ||||||||||||    
T  38238778 tacaccctccggtcactaatataagcaaaaatttcactttttagatacattcaattaatgatgtatgt 38238845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 1706828 - 1706894
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||| ||||||||  |||||||||  ||||| | ||||||||||||    
T  1706828 tacaccctccggtcactaatataagtaaaaatttattttttagatacattcaattaatgatgtatgt 1706894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 25245288 - 25245222
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || |||||||||||||     ||||||||| ||||||||||||||||||||    
T  25245288 tacaccctccggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 25245222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 38238929 - 38238863
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||| |  |||||||||  ||||| | ||||||||||||    
T  38238929 tacaccctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgt 38238863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 15051077 - 15051142
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||||  |||||||||||||||||   ||||||||  ||||| ||||||||||||    
T  15051077 ctacaccctccggtcacaaatataagcaaaaatttatgttttagatacattcaataaatgatgtat 15051142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 413
Target Start/End: Original strand, 37491278 - 37491335
Alignment:
Q  356 ggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||| || |||||||||||||||  |||||||||||||| | |||||||||||||||    
T  37491278 ggtcactattataagcaaaaatttactttttagatttattaaataaatgatgtatgta 37491335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 378
Target Start/End: Original strand, 40416900 - 40416933
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatt 378  Q
    ||||||||||||||||||||||||||||||||||    
T  40416900 ctacaccctccggtcattaatataagcaaaaatt 40416933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 5950339 - 5950275
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || |||||||||||| |    ||||||||| ||||||||||||||||||    
T  5950339 tacaccctccggtcactattataagcaaaaactaacattttagattcattcattaaatgatgtat 5950275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 10981838 - 10981898
Alignment:
Q  353 tccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||| ||||||||| |||| ||| ||||||||||| |||||||| |||| |||||||    
T  10981838 tccggtcactaatataagtaaaagtttaatttttagattcattcattagatgacgtatgta 10981898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 34703588 - 34703524
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| |||||||||||||||||   |||||||||  ||||| | ||||||||||    
T  34703588 tacaccctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtat 34703524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 41404010 - 41404074
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||| |||||||||| || ||||||||||||||    ||||||||| ||||||||||||||||||    
T  41404010 tacatcctccggtcactattataagcaaaaattatcattttagattcattcattaaatgatgtat 41404074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 412
Target Start/End: Complemental strand, 41872189 - 41872130
Alignment:
Q  353 tccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||| |||||||||||||||| |   ||||||||| ||||||| ||||||||||||    
T  41872189 tccggtcactaatataagcaaaaatctacattttagattcattcatttaatgatgtatgt 41872130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 412
Target Start/End: Complemental strand, 716363 - 716313
Alignment:
Q  362 taatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||||| ||||||||||  ||||| | ||||||||||||    
T  716363 taatataagcaaaaatttaatttttagatacattcaattaatgatgtatgt 716313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 410
Target Start/End: Complemental strand, 2297470 - 2297412
Alignment:
Q  352 ctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||| | |||||||| ||||| ||||||||||||||| |||||||||  |||||||    
T  2297470 ctccggttactaatataaacaaaagtttgatttttagattcattcattaagcgatgtat 2297412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 2943207 - 2943273
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||| |||||| || |||||||||||||     ||||||||| ||||||||||||||||||||    
T  2943207 tacacccttcggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 2943273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 6455694 - 6455628
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||| ||| |||||||||||||||| |   |||||| || ||||||| ||||||||||||    
T  6455694 tacaccctccgatcactaatataagcaaaaatctacattttaggttcattcatttaatgatgtatgt 6455628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 411
Target Start/End: Original strand, 7701190 - 7701248
Alignment:
Q  353 tccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    |||||||| || ||||||||||||| |   ||||||||| |||||||||||||||||||    
T  7701190 tccggtcactattataagcaaaaatctacattttagattcattcattaaatgatgtatg 7701248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 25079202 - 25079268
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||| |||||||||| |||||||||||||||| |  |||||||||  ||||| | ||||||||||||    
T  25079202 tacatcctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgt 25079268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 407
Target Start/End: Original strand, 6455544 - 6455605
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||| ||| || |||||||||||||||   ||||||||| ||||||| |||||||    
T  6455544 tacaccctccgatcactattataagcaaaaatttacattttagattcattcatttaatgatg 6455605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 412
Target Start/End: Original strand, 21096183 - 21096248
Alignment:
Q  347 acaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||| | |||| ||||||||||||||    ||||||||||||||||||||| || |||||    
T  21096183 acaccctccgattattattataagcaaaaattaatattttagatttattcattaaataatatatgt 21096248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 411
Target Start/End: Original strand, 43103067 - 43103132
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    ||||||||||||||| || ||||||||||||||    ||||| ||| ||| |||||||||||||||    
T  43103067 tacaccctccggtcactattataagcaaaaattaacattttaaattcatttattaaatgatgtatg 43103132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 413
Target Start/End: Original strand, 44416529 - 44416594
Alignment:
Q  348 caccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||||| ||||||| ||||||||    ||||||||| ||||| | |||||||||||||    
T  44416529 caccctccggtcataaatataaacaaaaattcatgttttagattcattcaatgaatgatgtatgta 44416594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 6847271 - 6847335
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||||| |||| ||| || ||||||||||||||||  ||||| ||||||||| | ||||||||||    
T  6847271 tacaccttccgatcactattataagcaaaaatttgcattttatatttattcaattaatgatgtat 6847335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 8447712 - 8447776
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| |||||||||||||||  |   |||||| || ||||||| ||||||||||    
T  8447712 tacaccctccggtcactaatataagcaaaaaactatattttaggttcattcatttaatgatgtat 8447776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 412
Target Start/End: Original strand, 22106672 - 22106728
Alignment:
Q  356 ggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||| |||||||||||||||| |  ||||||||| |||||| | ||||||||||||    
T  22106672 ggtcactaatataagcaaaaatctattttttagatatattcaattaatgatgtatgt 22106728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 23029263 - 23029200
Alignment:
Q  353 tccggtcattaatataagcaaaaatttg--atttttagattt-attcattaaatgatgtatgta 413  Q
    |||||||| | |||||||||||| ||||  |||||||||||| |||||||||||||| ||||||    
T  23029263 tccggtcagtgatataagcaaaagtttgtgatttttagatttcattcattaaatgatatatgta 23029200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 23797493 - 23797429
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || |||||| |||| ||||  ||||||||| ||||| | ||||||||||    
T  23797493 tacaccctccggtcactattataagtaaaattttgcattttagattcattcaattaatgatgtat 23797429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 406
Target Start/End: Original strand, 24935887 - 24935947
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgat 406  Q
    ||||||||||||||| |||||||||||||||| |   |||||| || ||||||| ||||||    
T  24935887 tacaccctccggtcactaatataagcaaaaatctacattttaggttcattcatttaatgat 24935947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 378
Target Start/End: Original strand, 34703442 - 34703470
Alignment:
Q  350 ccctccggtcattaatataagcaaaaatt 378  Q
    |||||||||||||||||||||||||||||    
T  34703442 ccctccggtcattaatataagcaaaaatt 34703470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 412
Target Start/End: Complemental strand, 40529679 - 40529623
Alignment:
Q  356 ggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||| |||||||||||||||| |  ||||||||| |||||| | ||||||||||||    
T  40529679 ggtcactaatataagcaaaaatctattttttagatatattcaattaatgatgtatgt 40529623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 5e-23; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 28702056 - 28702123
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  28702056 tacaccctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgatgtatgta 28702123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 21859484 - 21859544
Alignment:
Q  353 tccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  21859484 tccggtcactaatataaacaaaaatttgatttttagattcattcattaaatgatgtatgta 21859544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 21915347 - 21915407
Alignment:
Q  353 tccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  21915347 tccggtcactaatataaacaaaaatttgatttttagattcattcattaaatgatgtatgta 21915407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 28702206 - 28702139
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| |||||||||||||| |||||||||||| || ||||||||||||| |||||||    
T  28702206 tacaccctccggtcactaatataagcaaaagtttgatttttaggttcattcattaaatgacgtatgta 28702139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 17655207 - 17655140
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||| ||| ||| |||| ||||||||||||||||||||| |||||||||||||| ||||||    
T  17655207 tacaccctccgatcactaagataaacaaaaatttgatttttagattcattcattaaatgatatatgta 17655140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 412
Target Start/End: Complemental strand, 3511853 - 3511788
Alignment:
Q  347 acaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||||| ||||||||||| ||||  ||||| ||||||||||||||||||| ||||    
T  3511853 acaccctccggtcattattataagcaaaactttgcattttaaatttattcattaaatgatgaatgt 3511788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 403
Target Start/End: Complemental strand, 34134648 - 34134591
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaat 403  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  34134648 tacaccttccggtcactaatataagtaaaaatttgatttttagattcattcattaaat 34134591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 54508162 - 54508230
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||| |||| |||||||||||||||||   ||||||||| ||||| ||||||||||||||    
T  54508162 actacaccctccgatcataaatataagcaaaaatttatattttagattcattcaataaatgatgtatgt 54508230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 412
Target Start/End: Original strand, 2253953 - 2254015
Alignment:
Q  350 ccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||| |||||| ||||| ||||||||   |||||||||||||||||||||||||||||||    
T  2253953 ccctccgatcattattataaacaaaaattaattttttagatttattcattaaatgatgtatgt 2254015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 8826860 - 8826926
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| |||||||| || ||||| ||||||||||  ||||| ||||||||||||||||||||||||    
T  8826860 tacaccttccggtcactattataaacaaaaatttgtattttaaatttattcattaaatgatgtatgt 8826926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 16040105 - 16040040
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| ||| ||||| ||||||||||||||    
T  16040105 tacaccctccagtcataaatataagcaaaaattt-atttttaaattcattcaataaatgatgtatgt 16040040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 39533901 - 39533835
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||| ||||||||| |||||||||||||     ||||||||||||||||||||||||||||||    
T  39533901 tacaccctacggtcattattataagcaaaaatcaacattttagatttattcattaaatgatgtatgt 39533835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 54164958 - 54164892
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || ||||||||||||| |  |||||||||| ||||| ||||||||||||||    
T  54164958 tacaccctccggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgt 54164892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 20294573 - 20294512
Alignment:
Q  349 accctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||||||||||||||||||||||||||||||   |||||| || ||||||| ||||||||||    
T  20294573 accctccggtcattaatataagcaaaaatttacattttaggttcattcatttaatgatgtat 20294512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 411
Target Start/End: Complemental strand, 55087856 - 55087791
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||  ||||| | |||||||||||    
T  55087856 tacaccctccggtcactaatataagcaaaaatctaatttttagatacattcaattaatgatgtatg 55087791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 6087559 - 6087511
Alignment:
Q  365 tataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  6087559 tataagcaaaaatttaattttcagatttattcaataaatgatgtatgta 6087511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 409
Target Start/End: Original strand, 27537050 - 27537114
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgta 409  Q
    ||||| |||| |||||||| |||||||||||||||   ||||||||| |||||||||||||||||    
T  27537050 ctacatcctctggtcattattataagcaaaaatttacattttagattcattcattaaatgatgta 27537114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 403
Target Start/End: Original strand, 17655044 - 17655103
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaat 403  Q
    |||||||||||| |||| |||||||| ||||| |||| |||||||||| |||||||||||    
T  17655044 actacaccctccagtcactaatataaacaaaattttggtttttagattcattcattaaat 17655103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 19934783 - 19934717
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||| ||| || ||||||||||||| |  |||||||||| ||||| ||||||||||||||    
T  19934783 tacaccctccgatcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgt 19934717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 29006830 - 29006896
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| |||||||| || ||||||||||||| |  |||||||||| ||||| ||||||||||||||    
T  29006830 tacaccatccggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgt 29006896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 33558942 - 33558876
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||   |||||||||||||| |   ||||||||||||||| ||||||||||||||    
T  33558942 tacaccctccggtcacatatataagcaaaaatatatgttttagatttattcaataaatgatgtatgt 33558876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 365 - 414
Target Start/End: Complemental strand, 11796710 - 11796661
Alignment:
Q  365 tataagcaaaaatttgatttttagatttattcattaaatgatgtatgtaa 414  Q
    ||||||||||||||   |||||||||||||||| ||||||||||||||||    
T  11796710 tataagcaaaaattcactttttagatttattcaataaatgatgtatgtaa 11796661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 12912603 - 12912668
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||| || |||||| |||||| |||||||    ||||||||||||||||||||||||||||    
T  12912603 ctacacccttcgatcattattataagtaaaaattaacattttagatttattcattaaatgatgtat 12912668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 19878145 - 19878206
Alignment:
Q  349 accctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||||||||||| |||||||||||||||||    ||||||||| |||||||||| |||||||    
T  19878145 accctccggtcactaatataagcaaaaattaacattttagattcattcattaaacgatgtat 19878206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 412
Target Start/End: Original strand, 38381976 - 38382037
Alignment:
Q  351 cctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||| || |||||||||||||||   ||||||||| ||| ||||||||||||||||    
T  38381976 cctccggtcactattataagcaaaaatttacattttagattcattgattaaatgatgtatgt 38382037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 407
Target Start/End: Original strand, 54713093 - 54713154
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||||||| || |||||||||||||||   ||||||||| ||||||| |||||||    
T  54713093 tacaccctccggtcactattataagcaaaaatttacattttagattcattcatttaatgatg 54713154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 20788034 - 20788102
Alignment:
Q  349 accctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgtaactt 417  Q
    |||||||||||| || ||||||||||||||    |||||| || |||||||||||| ||||||||||||    
T  20788034 accctccggtcactattataagcaaaaattcatattttaggttcattcattaaatgttgtatgtaactt 20788102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 412
Target Start/End: Complemental strand, 52817714 - 52817646
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||||| ||||||||||||||||    |||||||||  ||||| | ||||||||||||    
T  52817714 actacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgt 52817646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 409
Target Start/End: Original strand, 26920667 - 26920730
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgta 409  Q
    |||||| |||||||| || ||||||||||| ||||  ||||||||| |||| ||||||||||||    
T  26920667 tacaccatccggtcactattataagcaaaattttgtattttagattcattcgttaaatgatgta 26920730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 410
Target Start/End: Complemental strand, 46518556 - 46518501
Alignment:
Q  355 cggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||| ||||||||||||||   ||||||| |||||||| ||||||||||||    
T  46518556 cggtcattattataagcaaaaattaactttttaggtttattcaataaatgatgtat 46518501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 52281113 - 52281180
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||| |||||||| || ||||||||||||| ||  ||||| ||| ||||| |||||||||||||||    
T  52281113 tacaccatccggtcactattataagcaaaaatatgcattttatattcattcaataaatgatgtatgta 52281180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 412
Target Start/End: Original strand, 54106469 - 54106536
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| |||||||||  ||||||||||||||||    ||||||||| ||||| ||||||||||||||    
T  54106469 ctacactctccggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgtatgt 54106536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 4406236 - 4406302
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| |||||||| || |||||| ||||||     ||||||||||||||||||||||||||||||    
T  4406236 tacaccatccggtcactattataagtaaaaatcaacattttagatttattcattaaatgatgtatgt 4406302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 5281280 - 5281214
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||| |||||||   |||||||||  ||||| | ||||||||||||    
T  5281280 tacaccctccggtcactaatataagtaaaaattcactttttagatacattcaattaatgatgtatgt 5281214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 5418660 - 5418594
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||| ||| ||||||||||||||||||  |||||||||  ||| | | ||||||||||||    
T  5418660 tacaccctccgatcactaatataagcaaaaatttactttttagatacattgaattaatgatgtatgt 5418594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 13689681 - 13689615
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||| ||||||||| |||||||||||||||||   |||||||||| ||||| | ||| ||||||||    
T  13689681 tacactctccggtcactaatataagcaaaaattcactttttagattcattcaattaataatgtatgt 13689615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 413
Target Start/End: Original strand, 16912427 - 16912501
Alignment:
Q  339 ttgagactacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||| ||| ||||||| ||| || |||||| |||| | | ||||||||||| ||||| |||||||||||||||    
T  16912427 ttgagagtactccctccgatcaatattataagtaaaagtgtaatttttagattcattcaataaatgatgtatgta 16912501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 19934633 - 19934699
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || ||||||||||| |    |||||||||| ||||| ||||||||||||||    
T  19934633 tacaccctccggtcactattataagcaaaattccactttttagattcattcaataaatgatgtatgt 19934699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 376
Target Start/End: Complemental strand, 21884164 - 21884134
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaa 376  Q
    |||||||||||||||||||||||||||||||    
T  21884164 tacaccctccggtcattaatataagcaaaaa 21884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 23568523 - 23568461
Alignment:
Q  348 caccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||| || |||||||||||| |    ||||||||| ||||||||||||||||||    
T  23568523 caccctccggtcactattataagcaaaaactaacattttagattcattcattaaatgatgtat 23568461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 412
Target Start/End: Complemental strand, 24156276 - 24156218
Alignment:
Q  354 ccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||| ||||||||||| ||    ||||||||||||| ||||||||||||||||    
T  24156276 ccggtcattattataagcaaaatttaacattttagatttatttattaaatgatgtatgt 24156218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 35425257 - 35425311
Alignment:
Q  356 ggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||||||| ||||||||||| ||| | ||||||||| ||||||| ||||||||||    
T  35425257 ggtcattattataagcaaaactttaaattttagattcattcatttaatgatgtat 35425311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 412
Target Start/End: Complemental strand, 54106612 - 54106554
Alignment:
Q  354 ccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||  |||||||||||||||||   ||||||||| ||||| ||||||||||||||    
T  54106612 ccggtcacaaatataagcaaaaatttatgttttagattcattcaataaatgatgtatgt 54106554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 54164808 - 54164874
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || ||||||||||| |    |||||||||| ||||| ||||||||||||||    
T  54164808 tacaccctccggtcactattataagcaaaattccactttttagattcattcaataaatgatgtatgt 54164874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 413
Target Start/End: Original strand, 2582809 - 2582870
Alignment:
Q  352 ctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||| |||||| |||||||||||||     ||||||||| |||||||||||||||||||||    
T  2582809 ctccgatcattattataagcaaaaatcaatattttagattgattcattaaatgatgtatgta 2582870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 412
Target Start/End: Complemental strand, 12672553 - 12672524
Alignment:
Q  383 ttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||||||||||||||||||    
T  12672553 ttttagatttattcattaaatgatgtatgt 12672524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 407
Target Start/End: Complemental strand, 56328595 - 56328534
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||||||| |||||||||||||||  |   ||||||||| ||||||| |||||||    
T  56328595 tacaccctccggtcactaatataagcaaaaaactacattttagattcattcatttaatgatg 56328534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 16468197 - 16468265
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| |||||||||| ||||||||||||||| ||   |||||| || ||| ||| ||||||||||||    
T  16468197 actacatcctccggtcactaatataagcaaaaaattacattttaggttcatttatttaatgatgtatgt 16468265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 412
Target Start/End: Original strand, 18626723 - 18626768
Alignment:
Q  365 tataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||  | ||||||||| ||||||||||||||||||||    
T  18626723 tataagcaaaaatt--aattttagattcattcattaaatgatgtatgt 18626768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 20215564 - 20215628
Alignment:
Q  348 caccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||| || ||||||||||||||    |||||| || ||||| ||||||||||||||    
T  20215564 caccctccggtcactattataagcaaaaattgacattttaggttcattcaataaatgatgtatgt 20215628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 21859624 - 21859560
Alignment:
Q  349 accctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||| |||| | ||||||||  |||| ||||||||||||||| ||||||||||| | |||||||    
T  21859624 acccttcggttactaatataaataaaattttgatttttagattcattcattaaataacgtatgta 21859560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 21915487 - 21915423
Alignment:
Q  349 accctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||| |||| | ||||||||  |||| ||||||||||||||| ||||||||||| | |||||||    
T  21915487 acccttcggttactaatataaataaaattttgatttttagattcattcattaaataacgtatgta 21915423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 26636566 - 26636518
Alignment:
Q  365 tataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||| ||||||||  |||||||||| ||||| |||||||||||||||    
T  26636566 tataagtaaaaatttattttttagattcattcaataaatgatgtatgta 26636518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 33693964 - 33694028
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||||||||||||||| | ||||||||||| ||||  |||||||||  |||| | ||||||||||    
T  33693964 tacaccctccggtcataattataagcaaaattttgcattttagattcgttcaattaatgatgtat 33694028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 36072565 - 36072629
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || ||||||||||| ||||  ||||||||| ||||| |  |||||||||    
T  36072565 tacaccctccggtcactattataagcaaaattttgcattttagattcattcaatttatgatgtat 36072629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 39160954 - 39160894
Alignment:
Q  351 cctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    |||||||||| || ||||| ||||||| |   ||||||||| |||||||||||||||||||    
T  39160954 cctccggtcactattataaacaaaaatctacattttagattcattcattaaatgatgtatg 39160894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 47181559 - 47181619
Alignment:
Q  351 cctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    |||||||||| || ||||||||||||| |   ||||| ||| |||||||||||||||||||    
T  47181559 cctccggtcactattataagcaaaaatctacattttaaattcattcattaaatgatgtatg 47181619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 48402551 - 48402491
Alignment:
Q  351 cctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    ||||||| || || ||||||||||||| |   ||||||||| |||||||||||||||||||    
T  48402551 cctccggccactattataagcaaaaatctatattttagattcattcattaaatgatgtatg 48402491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 412
Target Start/End: Complemental strand, 52914133 - 52914077
Alignment:
Q  356 ggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||| || ||||||||||||||    ||||||||| ||||||||||||||||||||    
T  52914133 ggtcactattataagcaaaaattaatattttagattcattcattaaatgatgtatgt 52914077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 55935983 - 55936046
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||| |||||||||| || ||||||||||||  | ||||| ||||| ||||||||||||||||||    
T  55935983 tacatcctccggtcactattataagcaaaaacataatttt-agattcattcattaaatgatgtat 55936046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 56364466 - 56364406
Alignment:
Q  351 cctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    |||||||||| || |||||| |||||| |   ||||||||| |||||||||||||||||||    
T  56364466 cctccggtcactattataagtaaaaatctacattttagattcattcattaaatgatgtatg 56364406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 22456325 - 22456257
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgtaa 414  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  22456325 tacaccctccggtcactaatatcagcaaaaatttgatttttagattcattcattaaatgacgtatgtaa 22456257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 40470563 - 40470496
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  40470563 tacaccctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgacgtatgta 40470496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 40470411 - 40470480
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  40470411 actacacccttcggtcactaatataagcaaaaatttaatttttagattcattcattaaatgacgtatgta 40470480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 17109263 - 17109326
Alignment:
Q  350 ccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||  |||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  17109263 ccctccggtcatggatataagcaaaaatttaatttttagattaattcattaaatgacgtatgta 17109326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 26244525 - 26244459
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || |||| |||||| ||||  ||||||||||||||||||||||||||||||    
T  26244525 tacaccctccggtcactattataggcaaaattttgcattttagatttattcattaaatgatgtatgt 26244459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 26121684 - 26121618
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || |||| | |||| ||||  ||||||||||||||||||||||||||||||    
T  26121684 tacaccctccggtcactattatagggaaaattttgcattttagatttattcattaaatgatgtatgt 26121618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 43818857 - 43818923
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || ||||||||||| ||||  ||||||||| |||||||||||||| |||||    
T  43818857 tacaccctccggtcactactataagcaaaattttgcattttagattcattcattaaatgatatatgt 43818923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 331943 - 331879
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || ||||||||||||||    ||||||||| ||||||||||||||||||    
T  331943 tacaccctccggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtat 331879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 402
Target Start/End: Complemental strand, 26143593 - 26143537
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaa 402  Q
    ||||||||||||||| |||||||| ||||| ||||||||||| ||| ||||||||||    
T  26143593 tacaccctccggtcactaatataaacaaaagtttgatttttaaattcattcattaaa 26143537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 27224725 - 27224661
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||| | || |||||||||||||| |  ||||||||| ||||||||||||||||||    
T  27224725 tacaccctccggttactattataagcaaaaattagcattttagattgattcattaaatgatgtat 27224661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 7981290 - 7981224
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||| ||||||||||  |||||||||||||||||   ||||||||||||||| |||||||| |||||    
T  7981290 tacatcctccggtcacaaatataagcaaaaatttatattttagatttattcaataaatgatatatgt 7981224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 22496946 - 22497012
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||| |||| || ||||||||||||||    ||||||||| ||||||||||||||||||||    
T  22496946 tacaccctccagtcactattataagcaaaaattaatattttagattcattcattaaatgatgtatgt 22497012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 27224575 - 27224641
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || ||||| |||||||     ||||||||||||||||||||||||||||||    
T  27224575 tacaccctccggtcactattataaacaaaaatcaacattttagatttattcattaaatgatgtatgt 27224641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 30578365 - 30578303
Alignment:
Q  348 caccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||||||| |||| || ||||||||||| ||||  ||||||||| ||||||||||||||||||    
T  30578365 caccctcctgtcactattataagcaaaactttgtattttagattcattcattaaatgatgtat 30578303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 36571379 - 36571437
Alignment:
Q  355 cggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||| || ||||||||||| |||  |||||||||||||||| |||||||||||||||    
T  36571379 cggtcactattataagcaaaagtttcttttttagatttattcaataaatgatgtatgta 36571437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 410
Target Start/End: Original strand, 37897675 - 37897741
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| |||| ||||||||||||| | | ||||||||| ||||| | ||||||||||    
T  37897675 actacaccctccggtaattattataagcaaaaatctaaattttagattcattcaattaatgatgtat 37897741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 38455160 - 38455226
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||||||||||||||||||||    |||||||||  ||| ||| ||||||||||||    
T  38455160 tacaccctccggtcattaatataagcaaaaatccactttttagatacattaatttaatgatgtatgt 38455226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 410
Target Start/End: Complemental strand, 47334789 - 47334723
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||||||||  ||||| |||| |||   ||||||||| ||||||||||||||||||    
T  47334789 actacaccctccggtcattatcataagtaaaattttacattttagattcattcattaaatgatgtat 47334723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 51239388 - 51239322
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||| |  |||||||||  ||||| | ||||||||||||    
T  51239388 tacaccctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgt 51239322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 52168278 - 52168344
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||  ||| | | ||||||||||||    
T  52168278 tacaccctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgtatgt 52168344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 407
Target Start/End: Complemental strand, 12047389 - 12047328
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||| ||||||||||||||||||  ||   ||||||||||||||||| |||||||    
T  12047389 tacaccctccgttcattaatataagcaaaagattacattttagatttattcatttaatgatg 12047328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 7882276 - 7882340
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || ||||||||||||||    ||||||||| ||| ||||||||||||||    
T  7882276 tacaccctccggtcactattataagcaaaaattaacattttagattcattaattaaatgatgtat 7882340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 10872817 - 10872753
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || |||||||||||||||   ||||||||| ||||| | ||||||||||    
T  10872817 tacaccctccggtcactattataagcaaaaatttatattttagattcattcaattaatgatgtat 10872753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 21217166 - 21217226
Alignment:
Q  351 cctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    |||||||||| || ||||||||||||| |   ||||||||| |||||||||||||||||||    
T  21217166 cctccggtcactattataagcaaaaatctacattttagattcattcattaaatgatgtatg 21217226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 412
Target Start/End: Complemental strand, 38455312 - 38455244
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||||| |||||||| |||||||||  |||||||||  ||| | | ||||||||||||    
T  38455312 actacaccctccggtcactaatataaacaaaaatttactttttagatacatttaattaatgatgtatgt 38455244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 54595934 - 54595871
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || |||||| |||||| | ||||| ||||| ||||||||||||||||||    
T  54595934 tacaccctccggtcactattataagtaaaaatataatttt-agattcattcattaaatgatgtat 54595871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 5919427 - 5919494
Alignment:
Q  346 tacaccctccggtcattaatataagc-aaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||  ||||||||| ||||||| |  ||||||||| ||||| ||||||||||||||    
T  5919427 tacaccctccggtcacaaatataagcaaaaaattcgtattttagattcattcaataaatgatgtatgt 5919494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 417
Target Start/End: Original strand, 7601909 - 7601980
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgtaactt 417  Q
    ||||||||||| ||| || ||||||||||| ||||| ||||||||| ||||| | |||| ||||| ||||||    
T  7601909 tacaccctccgatcactattataagcaaaactttgaattttagattcattcaattaatggtgtatataactt 7601980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 407
Target Start/End: Complemental strand, 8439405 - 8439342
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||||||||| ||||||||||||||| ||   |||||| || ||||||| |||||||    
T  8439405 actacaccctccggtcactaatataagcaaaaaattatattttaggttcattcatttaatgatg 8439342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 409
Target Start/End: Original strand, 9170107 - 9170170
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgta 409  Q
    ||||||||||||||| || |||||||||||| ||   ||||||||| |||| ||||||||||||    
T  9170107 tacaccctccggtcactattataagcaaaaaattacattttagattcattcgttaaatgatgta 9170170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 25881282 - 25881215
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||| |||||||||||||||  |   |||||| || ||||||| ||||||||||||    
T  25881282 ctacaccctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgt 25881215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 34063761 - 34063804
Alignment:
Q  357 gtcattaatataagcaaaaatttgatttttagatttattcatta 400  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||    
T  34063761 gtcactaatataagcaaaaatttgttttttaaatttattcatta 34063804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 412
Target Start/End: Complemental strand, 40639851 - 40639788
Alignment:
Q  349 accctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||| || ||||||||||||||    ||||| ||| ||||||||||||||||||||    
T  40639851 accctccggtcactattataagcaaaaattaacattttaaattcattcattaaatgatgtatgt 40639788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 412
Target Start/End: Complemental strand, 43818991 - 43818932
Alignment:
Q  353 tccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||| || ||||||||||| ||||  ||||||||| |||||||||||||| |||||    
T  43818991 tccggtcactattataagcaaaactttgcattttagattcattcattaaatgatatatgt 43818932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 2128506 - 2128440
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||| |||| || ||||||||||||||    ||||||||| ||||| ||||||||||||||    
T  2128506 tacaccctccagtcactattataagcaaaaattcatgttttagattcattcaataaatgatgtatgt 2128440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 12745046 - 12744980
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||| |||||| || ||||||||||||||    ||||||||  ||||||||||||||||||||    
T  12745046 tacacccttcggtcactattataagcaaaaattaacattttagatacattcattaaatgatgtatgt 12744980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 26367466 - 26367532
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||  |||||||||||||||     ||||||||| ||||| ||||||||||||||    
T  26367466 tacaccctccggtcacaaatataagcaaaaatccatgttttagattcattcaataaatgatgtatgt 26367532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 26367620 - 26367554
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||| ||||| |||||||||||||||     ||||||||| ||||| ||||||||||||||    
T  26367620 tacaccctccagtcataaatataagcaaaaatcaatgttttagattcattcaataaatgatgtatgt 26367554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 36362748 - 36362683
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||| |||||||||||||||||||| |  |||||||||  ||||| | ||||||||||||    
T  36362748 tacaccctccg-tcattaatataagcaaaaatctactttttagatacattcaattaatgatgtatgt 36362683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 41254078 - 41254008
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgtaa 414  Q
    ||||||||||||| |||||| |||||||||||||     ||||||||  ||| ||||||||||||||||||    
T  41254078 actacaccctccgatcattattataagcaaaaatcaacattttagatacatttattaaatgatgtatgtaa 41254008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 48191710 - 48191776
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||| |||||||||| || ||||| ||||||||    ||||||||| ||||||||||||||||||||    
T  48191710 tacatcctccggtcactattataaacaaaaattaacattttagattcattcattaaatgatgtatgt 48191776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 52168428 - 52168362
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||||||| ||||||||||||    |||||||||  ||| ||| ||||||||||||    
T  52168428 tacaccctccggtcattaacataagcaaaaatccactttttagatacattaatttaatgatgtatgt 52168362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 52216025 - 52215959
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || |||||||||||||     ||||||||| | ||||||||||||||||||    
T  52216025 tacaccctccggtcactattataagcaaaaatcaacattttagattcactcattaaatgatgtatgt 52215959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 413
Target Start/End: Original strand, 611587 - 611644
Alignment:
Q  356 ggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||| || |||||| |||| |||| |||||||||| ||||| |||||||||||||||    
T  611587 ggtcactattataagtaaaagtttgttttttagattaattcaataaatgatgtatgta 611644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 26143464 - 26143533
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||| | | ||||||||  ||||||| ||||||||  || ||||||||||| |||||||||    
T  26143464 actacaccctccgattactaatataaataaaaattagatttttaagttcattcattaaattatgtatgta 26143533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 412
Target Start/End: Complemental strand, 26243787 - 26243758
Alignment:
Q  383 ttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||||||||||||||||||    
T  26243787 ttttagatttattcattaaatgatgtatgt 26243758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 407
Target Start/End: Original strand, 38677560 - 38677621
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||||||| || ||||||||||| |||   ||||||||| ||||||| |||||||    
T  38677560 tacaccctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatg 38677621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 17552472 - 17552504
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatt 378  Q
    ||||||||||||||| |||||||||||||||||    
T  17552472 tacaccctccggtcactaatataagcaaaaatt 17552504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 410
Target Start/End: Original strand, 26104773 - 26104833
Alignment:
Q  350 ccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||| ||||| ||||||||||||||||||   |||||| || ||||||| ||||||||||    
T  26104773 ccctctggtcactaatataagcaaaaatttacattttaggttcattcatttaatgatgtat 26104833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 29565254 - 29565222
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatt 378  Q
    |||| ||||||||||||||||||||||||||||    
T  29565254 tacatcctccggtcattaatataagcaaaaatt 29565222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 34327649 - 34327589
Alignment:
Q  350 ccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||| |||||| ||||| ||||||||    ||||||||| ||||||||||||||||||    
T  34327649 ccctccgatcattattataaacaaaaattaacattttagattcattcattaaatgatgtat 34327589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 36566773 - 36566717
Alignment:
Q  353 tccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgta 409  Q
    |||||||| || ||||||||||| |||  |||||||||| ||||| |||||||||||    
T  36566773 tccggtcactattataagcaaaagttttctttttagattcattcaataaatgatgta 36566717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 39964289 - 39964357
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||| |||||||||||||| ||||||||||||  |  |||||||||| ||| | ||||| |||||||||    
T  39964289 ctactccctccggtcattattataagcaaaaaactactttttagattcattgaataaattatgtatgta 39964357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 41349655 - 41349687
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatt 378  Q
    ||||||||||||||| |||||||||||||||||    
T  41349655 tacaccctccggtcactaatataagcaaaaatt 41349687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 92983 - 92916
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  92983 tacactctccggtcactaatataagcaaaagtttgatttttagatttattcattaaatgacgtatgta 92916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 349 - 412
Target Start/End: Complemental strand, 13029456 - 13029393
Alignment:
Q  349 accctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  13029456 accctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgatgtatgt 13029393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 42749050 - 42749117
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||| |||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  42749050 tacatcctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgatgtatgta 42749117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 17087350 - 17087417
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||| |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  17087350 tacatcctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgacgtatgta 17087417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 17087487 - 17087425
Alignment:
Q  351 cctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  17087487 cctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgacgtatgta 17087425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 92838 - 92905
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||| |||| |||||||| |||||||    
T  92838 tacaccctcctgtcactaatataagcaaaagtttgatttttagattaattcgttaaatgacgtatgta 92905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 9878910 - 9878977
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||| |||||| |||||||||||||  ||||||||||||||| ||||||||||| |||||||||    
T  9878910 tacaccctgcggtcactaatataagcaaatgtttgatttttagattcattcattaaattatgtatgta 9878977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 362 - 413
Target Start/End: Original strand, 13029338 - 13029389
Alignment:
Q  362 taatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  13029338 taatataagcaaaagtttgatttttagattcattcattaaatgatgtatgta 13029389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 415
Target Start/End: Complemental strand, 1739710 - 1739641
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgtaac 415  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||  ||||| | |||||||||||||||    
T  1739710 tacaccctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgtaac 1739641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 413
Target Start/End: Complemental strand, 9879058 - 9878993
Alignment:
Q  348 caccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||| |||||||||||||  ||||||||||||||| ||||||||||| | |||||||    
T  9879058 caccctccggtcactaatataagcaaacgtttgatttttagattcattcattaaataacgtatgta 9878993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 409
Target Start/End: Original strand, 23627660 - 23627724
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgta 409  Q
    |||||||||||||||| || ||||||||||||| ||  ||||||||||||||||| |||||||||    
T  23627660 ctacaccctccggtcactattataagcaaaaatctgtattttagatttattcatttaatgatgta 23627724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 24287780 - 24287844
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || ||||||||||| ||||  ||||||||| ||||||||||||||||||    
T  24287780 tacaccctccggtcactattataagcaaaactttgcattttagattcattcattaaatgatgtat 24287844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 33070160 - 33070227
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||||||| |  ||||||||||| ||||  ||||||||| |||||||||||||||||||||    
T  33070160 tacaccctccggtcactgttataagcaaaactttgtattttagattcattcattaaatgatgtatgta 33070227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 409
Target Start/End: Original strand, 40640273 - 40640336
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgta 409  Q
    ||||||||||||||| || ||||||||||| ||||  ||||||||| |||||||||||||||||    
T  40640273 tacaccctccggtcactattataagcaaaactttgtattttagattcattcattaaatgatgta 40640336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 10934749 - 10934682
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||| || |||||||||||||     ||||||||| ||||||||||||||||||||    
T  10934749 ctacaccctccggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 10934682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 7484762 - 7484696
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||| ||||||||| |||||||||||||     ||||||||| ||||||||||||||||||||    
T  7484762 tacaccctacggtcattattataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 7484696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 24053592 - 24053658
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||| ||   |||||| || ||||||| ||||||||||||    
T  24053592 tacaccctccggtcactaatataagcaaaaaattatattttaggttcattcatttaatgatgtatgt 24053658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 410
Target Start/End: Complemental strand, 24287932 - 24287866
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||| |||||||||||| |||||| |||| ||||  ||||||||||||||| | ||||||||||    
T  24287932 actacactctccggtcattattataagtaaaactttgcattttagatttattcagttaatgatgtat 24287866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 412
Target Start/End: Complemental strand, 24820437 - 24820376
Alignment:
Q  351 cctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||| || ||||||||||||||   |||||||||| ||||| ||||||||||||||    
T  24820437 cctccggtcactattataagcaaaaattctctttttagattcattcaataaatgatgtatgt 24820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 411
Target Start/End: Complemental strand, 31810479 - 31810414
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    ||||||||||||||| |||||||||||||||  |   ||||||||| ||||||| |||||||||||    
T  31810479 tacaccctccggtcactaatataagcaaaaaactacattttagattcattcatttaatgatgtatg 31810414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 2296469 - 2296533
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||| |||||| |||||| ||||||||||| |||   ||||||||| ||||||||||||||||||    
T  2296469 tacatcctccgatcattattataagcaaaattttacattttagattcattcattaaatgatgtat 2296533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 412
Target Start/End: Original strand, 6260610 - 6260670
Alignment:
Q  352 ctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||| ||||||||||| ||  |||||||| |||||| | ||||||||||||||    
T  6260610 ctccggtcattattataagcaaaagttgaatttttaggtttatttaataaatgatgtatgt 6260670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 412
Target Start/End: Complemental strand, 7410712 - 7410644
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||| |||||||| || |||||||||| || || ||||||| |||||| | ||||||||||||||    
T  7410712 actacaccatccggtcactattataagcaaatatctgctttttaggtttattaaataaatgatgtatgt 7410644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 29424126 - 29424062
Alignment:
Q  348 caccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||  ||||||||||||||||    ||||||||| ||||| ||||||||||||||    
T  29424126 caccctccggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgtatgt 29424062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 33070310 - 33070246
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || ||||||||||| ||||  ||||||||| ||||||| |||| |||||    
T  33070310 tacaccctccggtcactattataagcaaaattttgcattttagattcattcatttaatggtgtat 33070246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 412
Target Start/End: Original strand, 5888330 - 5888397
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| ||| ||||| || ||||||||||||||    ||||||||| ||||||||||||||||||||    
T  5888330 ctacacgctctggtcactattataagcaaaaattaacgttttagattcattcattaaatgatgtatgt 5888397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 417
Target Start/End: Complemental strand, 44521393 - 44521322
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgtaactt 417  Q
    ||||||||||| ||| || ||||||||||| ||||| ||||||||| ||||| | |||| ||||| ||||||    
T  44521393 tacaccctccgatcactattataagcaaaactttgaattttagattcattcaattaatggtgtatataactt 44521322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 9056016 - 9056082
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||  ||||||||||||||||   |||||||||  ||||| | ||||||||||||    
T  9056016 tacaccctccggtcacaaatataagcaaaaattcactttttagatacattcaattaatgatgtatgt 9056082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 9056166 - 9056100
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||||   |||||||||  ||| | | ||||||||||||    
T  9056166 tacaccctccggtcactaatataagcaaaaattcactttttagatacatttaattaatgatgtatgt 9056100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 405
Target Start/End: Original strand, 9232538 - 9232588
Alignment:
Q  356 ggtcattaatataagcaaaaatttgatttttag-atttattcattaaatga 405  Q
    ||||| |||||||||||||| |||||||||||| ||| |||||||||||||    
T  9232538 ggtcactaatataagcaaaagtttgatttttagaattcattcattaaatga 9232588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 13211384 - 13211318
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||| |||||||||||||||||||| |||||| |  |||||||||  ||||| | ||||||||||||    
T  13211384 tacatcctccggtcattaatataagtaaaaatctattttttagatacattcaattaatgatgtatgt 13211318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 14381233 - 14381299
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||||    |||||||||  ||||| | ||||||||||||    
T  14381233 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgt 14381299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 15936198 - 15936264
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| || |||||| |||||||||||||||||   ||||| ||| ||||| ||||||||||||||    
T  15936198 tacaccatctggtcataaatataagcaaaaatttatattttatattaattcaataaatgatgtatgt 15936264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 31505183 - 31505117
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||  |   |||||| || ||||||| ||||||||||||    
T  31505183 tacaccctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgt 31505117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 34326240 - 34326306
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||| |||||||||||||  |||||||||| ||||  ||||||||| ||||| | ||||||||||||    
T  34326240 tacatcctccggtcattatcataagcaaaactttgcattttagattcattcaattaatgatgtatgt 34326306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 40098755 - 40098821
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||| |  |||||||||  ||||| | |||||| |||||    
T  40098755 tacaccctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatatatgt 40098821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 40098905 - 40098839
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||||    |||||||||  ||||| | ||||||||||||    
T  40098905 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgt 40098839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 412
Target Start/End: Original strand, 1897858 - 1897919
Alignment:
Q  351 cctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||| |||||||||||||     ||||| ||||||||||||||| ||||||||    
T  1897858 cctccggtcattattataagcaaaaatcaatattttatatttattcattaaataatgtatgt 1897919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 407
Target Start/End: Complemental strand, 13496580 - 13496519
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||||||| || |||||||||||||||   ||||| ||| ||||||| |||||||    
T  13496580 tacaccctccggtcactattataagcaaaaatttacattttaaattcattcatttaatgatg 13496519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 7484613 - 7484676
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| |  ||||||||||||  | ||||| ||||| ||||||||||||||||||    
T  7484613 tacaccctccggtcactgttataagcaaaaacataatttt-agattcattcattaaatgatgtat 7484676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 10117115 - 10117051
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||||| |||||||| || |||||||||||||||   ||||||||| ||||| | ||||||||||    
T  10117115 tacaccatccggtcactattataagcaaaaatttacattttagattcattcaattaatgatgtat 10117051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 13211234 - 13211278
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagat 390  Q
    ||||||||| ||||||||||||||| ||||||||  |||||||||    
T  13211234 tacaccctctggtcattaatataagtaaaaatttattttttagat 13211278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 410
Target Start/End: Original strand, 17871762 - 17871822
Alignment:
Q  350 ccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||| |||||||| |||||||||||||    ||||||| || ||||||||||||||||||    
T  17871762 ccctctggtcattattataagcaaaaatcaactttttaggttcattcattaaatgatgtat 17871822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 412
Target Start/End: Complemental strand, 21435804 - 21435748
Alignment:
Q  357 gtcattaatataagcaaaaatttgat-ttttagatttattcattaaatgatgtatgt 412  Q
    ||||| |||||||||||||| || || ||||||||| ||||| ||||||||||||||    
T  21435804 gtcataaatataagcaaaaagttcatattttagattcattcaataaatgatgtatgt 21435748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 412
Target Start/End: Complemental strand, 41387909 - 41387841
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||| |||||||| || ||||||||||||  |   ||||||||| ||||||||||| ||||||||    
T  41387909 actacaccatccggtcactattataagcaaaaaactatattttagattcattcattaaataatgtatgt 41387841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 20057251 - 20057184
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||| |||||||    
T  20057251 tacaccctccggtcattaatataagcaaaaatttgacttttagattcatccattaaatgacgtatgta 20057184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 31102094 - 31102028
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||| |||||| ||||||||||| ||||  ||||||||| ||||||||||||||||||||    
T  31102094 tacaccctccgatcattattataagcaaaagtttgcattttagattcattcattaaatgatgtatgt 31102028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 23992518 - 23992454
Alignment:
Q  349 accctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||  |||||||||||| |||||||    
T  23992518 accctccgatcactaatataagtaaaaatttgatttttagattcgttcattaaatgacgtatgta 23992454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 413
Target Start/End: Original strand, 25899849 - 25899900
Alignment:
Q  362 taatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  25899849 taatataagcaaaaatttgatttttaaatttatttattaaatgacgtatgta 25899900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 21488172 - 21488106
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||| ||||||||||||||||||||||||| ||   ||||||||| ||||||| ||||||||||||    
T  21488172 tacactctccggtcattaatataagcaaaaaattacattttagattcattcatttaatgatgtatgt 21488106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 23378087 - 23378021
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||||| ||||||||||||||    ||||||||| ||| ||||||||||||||||    
T  23378087 tacaccctccggtcattattataagcaaaaattaatattttagattcatttattaaatgatgtatgt 23378021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 43426773 - 43426707
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||||||||||||||||||||||  |||||||||  ||||| | |||||| |||||    
T  43426773 tacaccctccggtcattaatataagcaaaaatttattttttagatacattcaattaatgatatatgt 43426707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 4817136 - 4817091
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatt 391  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||    
T  4817136 tacaccctccagtcattaatataagcaaaagtttgatttttagatt 4817091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 15119922 - 15119858
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || ||||||||||||| |   ||||||||||||||||| ||||||||||    
T  15119922 tacaccctccggtcactattataagcaaaaatctacattttagatttattcatttaatgatgtat 15119858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 20057101 - 20057169
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgtaa 414  Q
    ||||||||||  ||| |||||| ||||||| ||||||||||| ||| ||||||||||||| ||||||||    
T  20057101 tacaccctcccatcactaatatgagcaaaagtttgatttttaaattgattcattaaatgacgtatgtaa 20057169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 41805419 - 41805355
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||| |||||||| ||||||||||| ||||  ||||||||| | ||||||||||||||||    
T  41805419 tacaccctctggtcattattataagcaaaactttgcattttagattcactcattaaatgatgtat 41805355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 413
Target Start/End: Complemental strand, 25899967 - 25899916
Alignment:
Q  362 taatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||| |||| ||||||||||||||||||| ||||||||| |||||||    
T  25899967 taatataagtaaaagtttgatttttagatttatttattaaatgacgtatgta 25899916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 44274682 - 44274619
Alignment:
Q  350 ccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||||||||| | |||||||||||||||   |||||||||| ||||| |||||||||||||||    
T  44274682 ccctccggtcactgatataagcaaaaattcactttttagattcattcaataaatgatgtatgta 44274619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 5574255 - 5574189
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||| |  |||||||||  ||||| | ||||||||||||    
T  5574255 tacaccctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgt 5574189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 15119772 - 15119838
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||| |||||| || ||||||||||||||    ||||||||| ||||||||||||||||||||    
T  15119772 tacacccttcggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgt 15119838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 24457095 - 24457161
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||| ||   |||||| || ||||||| ||||||||||||    
T  24457095 tacaccctccggtcactaatataagcaaaaaattacattttaggttcattcatttaatgatgtatgt 24457161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 38465784 - 38465850
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || |||||||||||||     ||||||||| ||||||||||||||||||||    
T  38465784 tacaccctccggtcactattataagcaaaaatcaacattttagattaattcattaaatgatgtatgt 38465850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 38594489 - 38594423
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||| |  |||||||||  ||||| | ||||||||||||    
T  38594489 tacaccctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgt 38594423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 38598085 - 38598019
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||| |  |||||||||  ||||| | ||||||||||||    
T  38598085 tacaccctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgt 38598019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 45473072 - 45473138
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||| ||||||||||||| |||||  |||||||  | ||||||||| ||||||||||||||||||||    
T  45473072 tacatcctccggtcattattataattaaaaattaaaattttagattcattcattaaatgatgtatgt 45473138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 407
Target Start/End: Original strand, 19612936 - 19612997
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||||||| |||||||||||||||| |   ||||||||| ||||||| |||||||    
T  19612936 tacaccctccggtcactaatataagcaaaaatctatattttagattcattcatttaatgatg 19612997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 3098266 - 3098206
Alignment:
Q  351 cctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    |||||||||| || ||||||||||||| |   ||||||||| |||||||||||||||||||    
T  3098266 cctccggtcactattataagcaaaaatctacattttagattcattcattaaatgatgtatg 3098206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 12242385 - 12242318
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgat-ttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||||||  ||||||||||||| ||  || ||||||||| |||||||||||||||||||||    
T  12242385 tacaccctccggtcacaaatataagcaaaa-ttccatattttagattcattcattaaatgatgtatgta 12242318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 25270996 - 25270936
Alignment:
Q  351 cctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    |||||||||| || ||||||||||||| |   ||||||||| |||||||||||||||||||    
T  25270996 cctccggtcactattataagcaaaaatctacattttagattcattcattaaatgatgtatg 25270936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 3124048 - 3123981
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    |||| ||||||||||  ||||||||||||||||    ||||||||| ||||| |||||||||||||||    
T  3124048 tacatcctccggtcacaaatataagcaaaaattcatgttttagattcattcaataaatgatgtatgta 3123981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 3887979 - 3887912
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||| ||||||||||||||||    |||||||||  ||||| | ||||||||||||    
T  3887979 ctacaccctccggtcactaatataagcaaaaatcatctttttagatacattcaattaatgatgtatgt 3887912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 405
Target Start/End: Original strand, 23992370 - 23992429
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatga 405  Q
    |||||| |||| ||| |||||||| ||||| ||||||||||| ||| |||||||||||||    
T  23992370 tacaccttccgatcactaatataaacaaaagtttgatttttaaattcattcattaaatga 23992429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 9431192 - 9431258
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||| ||||| ||   |||||| || ||||||| ||||||||||||    
T  9431192 tacaccctccggtcactaatataagtaaaaaattacattttaggttcattcatttaatgatgtatgt 9431258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 11726640 - 11726574
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||| ||||| |||| || ||||||||||||||    ||||||||| ||||||||||||||||||||    
T  11726640 tacatcctccagtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgt 11726574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 26229590 - 26229524
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || ||||||||||||||   ||||||| || |||||||||||  |||||||    
T  26229590 tacaccctccggtcactattataagcaaaaattcattttttaggttcattcattaaatattgtatgt 26229524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 32316413 - 32316479
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || ||||||||||||||   ||| ||| || |||||||||||| |||||||    
T  32316413 tacaccctccggtcactattataagcaaaaattcattttctaggttcattcattaaatgttgtatgt 32316479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 413
Target Start/End: Complemental strand, 32630514 - 32630484
Alignment:
Q  383 ttttagatttattcattaaatgatgtatgta 413  Q
    |||||||||||||||||||||||||||||||    
T  32630514 ttttagatttattcattaaatgatgtatgta 32630484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 38618243 - 38618177
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||||||||||||| |||||| |  || ||||||  ||||| | ||||||||||||    
T  38618243 tacaccctccggtcattaatataagtaaaaatctatttgttagatacattcaattaatgatgtatgt 38618177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 45035928 - 45035862
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||  ||||||||||||||| |   ||||||||| | ||| ||||||||||||||    
T  45035928 tacaccctccggtcacaaatataagcaaaaatatatgttttagattcactcaataaatgatgtatgt 45035862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 412
Target Start/End: Complemental strand, 1981120 - 1981063
Alignment:
Q  355 cggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| |||||||||||||||| | ||||||||||  ||||| | ||||||||||||    
T  1981120 cggtcactaatataagcaaaaatctcatttttagatacattcaattaatgatgtatgt 1981063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 23143632 - 23143567
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||| ||||||||||| || |||||||||||||    ||||||| |||||||| ||||||||||||    
T  23143632 ctactccctccggtcactattataagcaaaaatcaactttttaggtttattcaataaatgatgtat 23143567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 23555422 - 23555357
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||| ||||||||||| || |||||||||||||    ||||||| |||||||| ||||||||||||    
T  23555422 ctactccctccggtcactattataagcaaaaatcaactttttaggtttattcaataaatgatgtat 23555357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 407
Target Start/End: Complemental strand, 26234169 - 26234108
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||||||| || ||||||||||| |||   ||||||||| ||||||| |||||||    
T  26234169 tacaccctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatg 26234108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 41057025 - 41056968
Alignment:
Q  354 ccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatg 411  Q
    ||||||| || ||||||||||||| |   ||||||||| |||||||||||||||||||    
T  41057025 ccggtcactattataagcaaaaatctacattttagattcattcattaaatgatgtatg 41056968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 8510650 - 8510586
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || |||||||||||| |    |||| |||| ||||||||||||||||||    
T  8510650 tacaccctccggtcactattataagcaaaaactaacattttggattcattcattaaatgatgtat 8510586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 13994334 - 13994271
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || ||||||||||| |   | ||||||||| ||||||||||||||||||    
T  13994334 tacaccctccggtcactattataagcaaaactaaca-ttttagattcattcattaaatgatgtat 13994271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 415
Target Start/End: Original strand, 22373610 - 22373674
Alignment:
Q  351 cctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgtaac 415  Q
    |||||||||| |||||||||||||||| |  |||||| || |||||| | |||||||||| ||||    
T  22373610 cctccggtcactaatataagcaaaaatatattttttaaatatattcaattaatgatgtatataac 22373674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 412
Target Start/End: Original strand, 38181765 - 38181821
Alignment:
Q  356 ggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||| |||||||||||||     ||||||||| ||||||||||||||||||||    
T  38181765 ggtcattattataagcaaaaatcaatattttagattcattcattaaatgatgtatgt 38181821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 41805269 - 41805333
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || ||||||||||| ||||  ||||| ||| ||||| | ||||||||||    
T  41805269 tacaccctccggtcactattataagcaaaattttgcattttaaattcattcaattaatgatgtat 41805333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 14310666 - 14310600
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||| ||  ||||||||| ||||||| ||||||||||||    
T  14310666 tacaccctccggtcactaatataagcaaaaatctgtattttagattcattcatttaatgatgtatgt 14310600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 21506608 - 21506542
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||  ||||| | ||||||||||||    
T  21506608 tacaccatccggtcattaatataagcaaaaatttaatttttagatacattcaattaatgatgtatgt 21506542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 414
Target Start/End: Original strand, 13462927 - 13462996
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgtaa 414  Q
    |||||||||||||||| || || |||||||| |||| |||||||||  ||||| ||||||||||||||||    
T  13462927 ctacaccctccggtcactattagaagcaaaagtttgctttttagatccattcaataaatgatgtatgtaa 13462996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 409
Target Start/End: Complemental strand, 8146094 - 8146031
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgta 409  Q
    ||||||||||||||| ||||||||||||||| ||   ||||||||| ||||||| |||||||||    
T  8146094 tacaccctccggtcactaatataagcaaaaaattacattttagattcattcatttaatgatgta 8146031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 412
Target Start/End: Complemental strand, 17773651 - 17773580
Alignment:
Q  341 gagactacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||| ||||||||||||||| |||||||||||||||| |  |||||||||  ||||| | ||||||||||||    
T  17773651 gagaatacaccctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgt 17773580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 13277167 - 13277101
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||  ||||||| |||||||||   ||||||||| ||||| ||||||||||||||    
T  13277167 tacaccctccggtcacaaatataaacaaaaatttatattttagattcattcaataaatgatgtatgt 13277101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 407
Target Start/End: Complemental strand, 6560802 - 6560741
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||||||| ||||||||||||||| ||   ||||||||| ||||||| |||||||    
T  6560802 tacaccctccggtcactaatataagcaaaaaattacattttagattcattcatttaatgatg 6560741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 412
Target Start/End: Original strand, 15836531 - 15836600
Alignment:
Q  343 gactacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||| ||||||||| ||||||||||||||||    || |||||| ||||| ||||||||||||||    
T  15836531 gactacaccatccggtcataaatataagcaaaaattcatattgtagattcattcaataaatgatgtatgt 15836600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 412
Target Start/End: Complemental strand, 30460757 - 30460692
Alignment:
Q  347 acaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||| |||| ||||||||||||||||||  |||||||||  ||||| | ||||||||||||    
T  30460757 acaccctccagtcactaatataagcaaaaatttactttttagatagattcaattaatgatgtatgt 30460692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 15517086 - 15517149
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || ||||||||||||  | ||||| ||||| ||||||||||||||||||    
T  15517086 tacaccctccggtcactattataagcaaaaacataatttt-agattcattcattaaatgatgtat 15517149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 31398219 - 31398287
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||||| |||||||||||||||  |   |||||| || ||||||| ||||||||||||    
T  31398219 actacaccctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgt 31398287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 412
Target Start/End: Complemental strand, 32254968 - 32254900
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||| ||| || ||||||||||| ||    ||||||||| ||||||||||||||||||||    
T  32254968 actacaccctccgatcactattataagcaaaagttaatattttagattcattcattaaatgatgtatgt 32254900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 34379731 - 34379794
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||||| || ||||||||||||  | ||||| ||||| ||||||||||||||||||    
T  34379731 tacaccctccggtcactattataagcaaaaacataatttt-agattcattcattaaatgatgtat 34379794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 376
Target Start/End: Original strand, 2988794 - 2988824
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaa 376  Q
    |||||||||||||||||||||||||||||||    
T  2988794 tacaccctccggtcattaatataagcaaaaa 2988824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 3012505 - 3012439
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||| | ||||| ||||||||||||||||    ||||||||| ||||| ||||||||||||||    
T  3012505 tacacccttcagtcataaatataagcaaaaattcatgttttagattcattcaataaatgatgtatgt 3012439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 6560652 - 6560718
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||||  |   |||||| || ||||||| ||||||||||||    
T  6560652 tacaccctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgt 6560718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 7158251 - 7158317
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||| | |||  ||||||||||||||| |   ||||||||||||||| ||||||||||||||    
T  7158251 tacaccctctgatcacaaatataagcaaaaatctatgttttagatttattcaataaatgatgtatgt 7158317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 13276481 - 13276547
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||  ||||||||||||||||    |||||| || ||||| ||||||||||||||    
T  13276481 tacaccctccggtcacaaatataagcaaaaattcatgttttaggttcattcaataaatgatgtatgt 13276547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 15517235 - 15517169
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||| || ||||||||| |||||||||||||     ||||||||| ||||||||||||||||||||    
T  15517235 tacactctacggtcattattataagcaaaaatcaatattttagattcattcattaaatgatgtatgt 15517169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 18886303 - 18886369
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||| |||| || ||||||||||||||    ||||||||| |||||||||||||| |||||    
T  18886303 tacaccctccagtcactattataagcaaaaattaatattttagattcattcattaaatgatatatgt 18886369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 21506458 - 21506524
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||||    |||||||||  ||||| | ||||||||||||    
T  21506458 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgt 21506524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 29215588 - 29215522
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||| |||||| || ||||||||||| ||||  ||||||||| ||| ||||| ||||||||||    
T  29215588 tacacccttcggtcactattataagcaaaattttgtattttagattcatttattaagtgatgtatgt 29215522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 30397869 - 30397803
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||||    |||||||||  ||||| | ||||||||||||    
T  30397869 tacaccctccggtcactaatataagcaaaaatcccttttttagatacattcaattaatgatgtatgt 30397803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 31536306 - 31536372
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||||    |||||||||  ||| ||| ||||||||||||    
T  31536306 tacaccctccggtcactaatataagcaaaaatcaactttttagatacatttatttaatgatgtatgt 31536372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 33053760 - 33053826
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||||  |||||||| |||||| |   ||||||||| ||||| ||||||||||||||    
T  33053760 tacaccctccggtcacaaatataagaaaaaatctatgttttagattcattcaataaatgatgtatgt 33053826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 413
Target Start/End: Original strand, 14173395 - 14173452
Alignment:
Q  356 ggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||| || ||||||||||||| | ||||||||||| ||||| ||||||| |||||||    
T  14173395 ggtcactattataagcaaaaatctaatttttagattcattcaataaatgaagtatgta 14173452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 413
Target Start/End: Original strand, 14177931 - 14177988
Alignment:
Q  356 ggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgta 413  Q
    ||||| || ||||||||||||| | ||||||||||| ||||| ||||||| |||||||    
T  14177931 ggtcactattataagcaaaaatctaatttttagattcattcaataaatgaagtatgta 14177988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 410
Target Start/End: Complemental strand, 24111237 - 24111180
Alignment:
Q  353 tccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||| |||||| |||||| |||| ||  ||||||||||||||||| ||||||||||||    
T  24111237 tccgttcattattataagtaaaagttcaatttttagatttattcaataaatgatgtat 24111180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 412
Target Start/End: Complemental strand, 26527330 - 26527269
Alignment:
Q  351 cctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| ||| || ||||||||||||||    ||||||||| ||||||||||||||||||||    
T  26527330 cctccgttcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgt 26527269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 407
Target Start/End: Complemental strand, 31398371 - 31398310
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatg 407  Q
    ||||||||||||||| || ||||||||||| |||   ||||||||| ||||||| |||||||    
T  31398371 tacaccctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatg 31398310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 5571514 - 5571582
Alignment:
Q  344 actacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||| ||| || || ||||||||||| ||||  ||||||||| ||| |||||||||| |||||    
T  5571514 actacacccttcggccactattataagcaaaactttgcattttagattcatttattaaatgatatatgt 5571582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 11073605 - 11073546
Alignment:
Q  350 ccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    |||||||||||||| |||||||||||| || |||||||| || ||| | ||||||||||||    
T  11073605 ccctccggtcattattataagcaaaaaatt-atttttaggttcattaaataaatgatgtat 11073546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 120290 - 120224
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||  ||||| | ||||||||||||    
T  120290 tacaccctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgt 120224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 120140 - 120206
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| |||||||||||||| ||   |||||||||  ||||| | ||||||||||||    
T  120140 tacaccctccggtcactaatataagcaaaatttcactttttagatacattcaattaatgatgtatgt 120206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 412
Target Start/End: Complemental strand, 24750 - 24685
Alignment:
Q  347 acaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||||||| || ||||||||||||||    ||||||||| ||||||||||||||||||||    
T  24750 acaccctccggtcactattataagcaaaaattaatattttagattcattcattaaatgatgtatgt 24685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 412
Target Start/End: Complemental strand, 4096 - 4029
Alignment:
Q  345 ctacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||| ||||| ||||||||||||||||||  |||||||||  ||||| |||||| |||||||    
T  4096 ctacaccctctggtcactaatataagcaaaaatttactttttagatacattcaataaatgttgtatgt 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 246940 - 246876
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||| |||||||||||||||||||||| |  |||||||||  ||||| | ||||||||||    
T  246940 tacaccctctggtcattaatataagcaaaaatctactttttagatacattcaattaatgatgtat 246876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 246790 - 246856
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||| || ||||| ||||||||||||||||||  |||||||||  ||||| | ||||||||||||    
T  246790 tacaccgtctggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgt 246856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 17378 - 17314
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||| |  ||||||||||||||| ||  ||||||||| ||||| ||||||||||||||    
T  17378 tacaccctccggttacaaatataagcaaaaatatg--ttttagattcattcaataaatgatgtatgt 17314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 4518 - 4452
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| || ||||||||||||||   ||| ||| || |||||||||||| |||||||    
T  4518 tacaccctccggtcactattataagcaaaaattcattttctaggttcattcattaaatgttgtatgt 4452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 6358 - 6292
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||| |||||||||||||| ||||| ||   |||||| || ||||||| ||||||||||||    
T  6358 tacaccctccagtcattaatataagtaaaaaattacattttaggttcattcatttaatgatgtatgt 6292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 61158 - 61224
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    ||||||||||||||| ||||||||||||||||    |||||||||  ||||| | ||||||||||||    
T  61158 tacaccctccggtcactaatataagcaaaaatcccttttttagatacattcaattaatgatgtatgt 61224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 139441 - 139375
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtatgt 412  Q
    |||||||||| |||| | ||||||||||||| ||   ||||||||| ||||||| ||||||||||||    
T  139441 tacaccctcccgtcactcatataagcaaaaaattacattttagattcattcatttaatgatgtatgt 139375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 411
Target Start/End: Original strand, 40485 - 40513
Alignment:
Q  383 ttttagatttattcattaaatgatgtatg 411  Q
    |||||||||||||||||||||||||||||    
T  40485 ttttagatttattcattaaatgatgtatg 40513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 54383 - 54447
Alignment:
Q  346 tacaccctccggtcattaatataagcaaaaatttgatttttagatttattcattaaatgatgtat 410  Q
    ||||||||||||| | |||||||||||||||| |  |||||||||  ||||| | ||||||||||    
T  54383 tacaccctccggttactaatataagcaaaaatctactttttagatacattcaattaatgatgtat 54447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University