View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14936_high_20 (Length: 243)
Name: NF14936_high_20
Description: NF14936
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14936_high_20 |
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Alignment Details
Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 34826574 - 34826796
Alignment:
| Q |
4 |
agcctgatgcacaaccatcacccaaatgacctccatctttgctataactttggagtatttttctcacatcaacagattttccaatataaaccactactac |
103 |
Q |
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| T |
34826574 |
agcctgatgcacaaccatcacccaaatgacctccatctttgctataactttggagtatttttctcacatcaacagattttccaatataaaccactactac |
34826673 |
T |
|
| Q |
104 |
gccatgagggtcagtcgcaagcttgtaaatttcacaccctaaatcactagtcgacgaacctacaccaagctcatacactcccacactgaaattttgtggc |
203 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34826674 |
gccatgagggtcggtcgcaagcttgtaaatttcacaccctaaatcactagtcgacgaacctacaccaagctcatacactcccacactgaaattttgtggc |
34826773 |
T |
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| Q |
204 |
aggttttctttcttgtatcttgt |
226 |
Q |
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||||||||||||||||||||||| |
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| T |
34826774 |
aggttttctttcttgtatcttgt |
34826796 |
T |
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