View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14937_high_1 (Length: 471)
Name: NF14937_high_1
Description: NF14937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14937_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 424; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 1 - 452
Target Start/End: Original strand, 8536757 - 8537208
Alignment:
| Q |
1 |
ccatataatgagatccataacatcaaatagaattcagttagtttgaagatcaatctcaagtttaatgatactcaaaataacaaaagataaactagcccac |
100 |
Q |
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| T |
8536757 |
ccatataatgagatccataacatcaaatagaattcggttagtttgaagatcaatctcaagtttaatgatactcaaaataacaaaagataaactagcccac |
8536856 |
T |
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| Q |
101 |
tatagcatattttaccaaaatgataaaatatgtaatcaaagaaacaaaataagtaggtccacagttatagaaacggatgcaaagaaaattggtaaaaaac |
200 |
Q |
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| T |
8536857 |
tatagcatattttaccaaaatgataaaatatgtaatcaaagaaacaaaataagtaggtccacagttatagaaacggatgcaaagaaaattggtaaaaaac |
8536956 |
T |
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| Q |
201 |
tactaactataactgaatcagtatcttaatcaacctaaccatttcttttcatgcccaaagtagattcagtgatgctctcaagcttcttcaacatgttcac |
300 |
Q |
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| T |
8536957 |
tactaactataactaaaacagtatcttaatcaacctaaccattttttttcatgcccaaagtagattcagtgatgctctcaagcttcttcaacatgttcac |
8537056 |
T |
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| Q |
301 |
aaacacatatgtttcttcattcttgtcaccatcaagcaaatattcacattttgtaattagggaagtgatcttatttttgcttcgcgtaggaagcaaagaa |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |
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| T |
8537057 |
aaacacatatgtttcttcattcttgtcaccatcaagcaaatattcacattttgtaattagggaagtgatcttatttttgctttgcgtgggaagcaaagaa |
8537156 |
T |
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| Q |
401 |
ctaacattcatatccttcataactttcttcacattgtagagatagtcatcca |
452 |
Q |
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| T |
8537157 |
ctaacattcgtatccttcataactttcttcacattgtagagatagtcatcca |
8537208 |
T |
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