View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14938_high_1 (Length: 640)
Name: NF14938_high_1
Description: NF14938
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14938_high_1 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 618; Significance: 0; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 618; E-Value: 0
Query Start/End: Original strand, 1 - 626
Target Start/End: Complemental strand, 27777043 - 27776418
Alignment:
| Q |
1 |
gcttgtttcaaattgtctctttcgcgtaggtggtgcagcaattttactctcaaacatttcttcagattctaaccgttcaaaatatctccttaaacacact |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27777043 |
gcttgtttcaaattgtctctttcgtgtaggtggtgcagcaattttactctcaaacatttcttcagattctaaccgttcaaaatatctccttaaacacact |
27776944 |
T |
 |
| Q |
101 |
gttcgtacacacaaaggttcacaagataattgttacaattcaatccttcaacaagaagatgaaacaaacaaaatcacaggaatttcactctcaaaacaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27776943 |
gttcgtacacacaaaggttcacaagataattgttacaattcaatccttcaacaagaagatgaaacaaacaaaatcacaggaatttcactctcaaaacaac |
27776844 |
T |
 |
| Q |
201 |
taatgagttcagctggttttgcacttaaagcaaacatcacaacacttggaaaatcagttttacctttactagaacaattaaaatatgctacaacttttgt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
27776843 |
taatgagttcagctggttttgcacttaaagcaaacatcacaacacttggaaaatcagttttacctttactagaacaattaaaatatgctgcaacttttgt |
27776744 |
T |
 |
| Q |
301 |
agctaaaaagtattttaattccaaaattagggtttatacacctgattttaagctatgttttgagcatttttgtattcatactggtggaaaaggtgttcaa |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27776743 |
agctaaaaagtattttaattccaaaattagggtttatacacctgattttaagctatgttttgagcatttttgtattcatactggtggaaaaggtgttcaa |
27776644 |
T |
 |
| Q |
401 |
gatgagatacaaaaagtgcttggattaagtgattggcaaattgagccttcaagaatgacactttatagatatggaaatacttcaagtagttctgtttggt |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27776643 |
gatgagatacaaaaagtgcttggattaagtgattggcaaattgagccttcaagaatgacactttatagatatggaaatacttcaagtagttctgtttggt |
27776544 |
T |
 |
| Q |
501 |
atgttttggcttattgtgaagctaagggaaggataaggaaaggtgataggatttggcaaattgcatttgggtctggatttaaatgtaacactgctgtttg |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27776543 |
atgttttggcttattgtgaagctaagggaaggataaggaaaggtgataggatttggcaaattgcatttgggtctggatttaaatgtaacactgctgtttg |
27776444 |
T |
 |
| Q |
601 |
gtgtgctttaaggaatgttgatcctg |
626 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
27776443 |
gtgtgctttaaggaatgttgatcctg |
27776418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 443 - 625
Target Start/End: Original strand, 10279956 - 10280138
Alignment:
| Q |
443 |
gagccttcaagaatgacactttatagatatggaaatacttcaagtagttctgtttggtatgttttggcttattgtgaagctaagggaaggataaggaaag |
542 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| || || ||| |||||||||||||||| ||| ||||||||||||||||||| || | | || | |
|
|
| T |
10279956 |
gagccttcaagaatgacactatatagatatggtaacacatcatcaagttctgtttggtatgaattgtcttattgtgaagctaaggggagagttaaaaagg |
10280055 |
T |
 |
| Q |
543 |
gtgataggatttggcaaattgcatttgggtctggatttaaatgtaacactgctgtttggtgtgctttaaggaatgttgatcct |
625 |
Q |
| |
|
| ||| |||||||||||| || ||||| ||||||||||| ||| ||||||||||||| |||||| | ||||||||||||| |
|
|
| T |
10280056 |
gacataagatttggcaaatggcttttggatctggatttaaggttaatactgctgtttggtatgctttgaagaatgttgatcct |
10280138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 364; Significance: 0; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 1 - 624
Target Start/End: Complemental strand, 19743404 - 19742781
Alignment:
| Q |
1 |
gcttgtttcaaattgtctctttcgcgtaggtggtgcagcaattttactctcaaacatttcttcagattctaaccgttcaaaatatctccttaaacacact |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| |||| ||||| |||||| |
|
|
| T |
19743404 |
gcttgtttcaaattgtctctttcgtgtaggtggtgcagcaatcttactctcaaacatttcttcagattctcaacgttcaaagtatcatcttaagcacact |
19743305 |
T |
 |
| Q |
101 |
gttcgtacacacaaaggttcacaagataattgttacaattcaatccttcaacaagaagatgaaacaaacaaaatcacaggaatttcactctcaaaacaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||| | ||||| |||||| ||| |
|
|
| T |
19743304 |
gttcgtacacacaaaggttcacaagatacttgttacaattcagtctttcaaaaagaagatgaaacaaacaaaatcacaggagtatcactttcaaaagaac |
19743205 |
T |
 |
| Q |
201 |
taatgagttcagctggttttgcacttaaagcaaacatcacaacacttggaaaatcagttttacctttactagaacaattaaaatatgctacaacttttgt |
300 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| || | || | |||||||||| |
|
|
| T |
19743204 |
taatgagttcggctggttttgcacttaaagccaacatcacaacacttggaaaatatgttctacctttactagaacaattcaagtttgtttcaacttttgt |
19743105 |
T |
 |
| Q |
301 |
agctaaaaagtattttaattccaaaattagggtttatacacctgattttaagctatgttttgagcatttttgtattcatactggtggaaaaggtgttcaa |
400 |
Q |
| |
|
| |||||| || |||||| |||| | | | |||||||||||||||||||| | |||||||| || |||||| ||||||| |||||||||| |||| |
|
|
| T |
19743104 |
tgttaaaaaatactttaataacaaagtcaagatttatacacctgattttaagttgtgttttgaccacttttgtgttcatacgggtggaaaagcggttctt |
19743005 |
T |
 |
| Q |
401 |
gatgagatacaaaaagtgcttggattaagtgattggcaaattgagccttcaagaatgacactttatagatatggaaatacttcaagtagttctgtttggt |
500 |
Q |
| |
|
|||||||| ||||||||||| || |||||||||| ||| | |||||||||| |||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
19743004 |
gatgagattcaaaaagtgctggggttaagtgattttcaattagagccttcaaagatgacactttatagatatggtaacacttcaagtagttctgtttggt |
19742905 |
T |
 |
| Q |
501 |
atgttttggcttattgtgaagctaagggaaggataaggaaaggtgataggatttggcaaattgcatttgggtctggatttaaatgtaacactgctgtttg |
600 |
Q |
| |
|
||| ||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19742904 |
atgagttggcatattgtgaagctaaaggaagaataagaaaaggtgataggatttggcaaattgcatttgggtctggatttaagtgtaacactgctgtttg |
19742805 |
T |
 |
| Q |
601 |
gtgtgctttaaggaatgttgatcc |
624 |
Q |
| |
|
|||||| ||||||||||||||||| |
|
|
| T |
19742804 |
gtgtgcattaaggaatgttgatcc |
19742781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 1 - 624
Target Start/End: Original strand, 19796684 - 19797307
Alignment:
| Q |
1 |
gcttgtttcaaattgtctctttcgcgtaggtggtgcagcaattttactctcaaacatttcttcagattctaaccgttcaaaatatctccttaaacacact |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| |||| ||||| |||||| |
|
|
| T |
19796684 |
gcttgtttcaaattgtctctttcgtgtaggtggtgcagcaatcttactctcaaacatttcttcagattctcaacgttcaaagtatcatcttaagcacact |
19796783 |
T |
 |
| Q |
101 |
gttcgtacacacaaaggttcacaagataattgttacaattcaatccttcaacaagaagatgaaacaaacaaaatcacaggaatttcactctcaaaacaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||| | ||||| |||||| ||| |
|
|
| T |
19796784 |
gttcgtacacacaaaggttcacaagatacttgttacaattcagtctttcaaaaagaagatgaaacaaacaaaatcacaggagtatcactttcaaaagaac |
19796883 |
T |
 |
| Q |
201 |
taatgagttcagctggttttgcacttaaagcaaacatcacaacacttggaaaatcagttttacctttactagaacaattaaaatatgctacaacttttgt |
300 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| || | || | |||||||||| |
|
|
| T |
19796884 |
taatgagttcggctggttttgcacttaaagccaacatcacaacacttggaaaatatgttctacctttactagaacaattcaagtttgtttcaacttttgt |
19796983 |
T |
 |
| Q |
301 |
agctaaaaagtattttaattccaaaattagggtttatacacctgattttaagctatgttttgagcatttttgtattcatactggtggaaaaggtgttcaa |
400 |
Q |
| |
|
| |||||| || |||||| |||| | | | |||||||||||||||||||| | |||||||| || |||||| ||||||| |||||||||| |||| |
|
|
| T |
19796984 |
tgttaaaaaatactttaataacaaagtcaagatttatacacctgattttaagttgtgttttgaccacttttgtgttcatacgggtggaaaagcggttctt |
19797083 |
T |
 |
| Q |
401 |
gatgagatacaaaaagtgcttggattaagtgattggcaaattgagccttcaagaatgacactttatagatatggaaatacttcaagtagttctgtttggt |
500 |
Q |
| |
|
|||||||| ||||||||||| || |||||||||| ||| | |||||||||| |||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
19797084 |
gatgagattcaaaaagtgctggggttaagtgattttcaattagagccttcaaagatgacactttatagatatggtaacacttcaagtagttctgtttggt |
19797183 |
T |
 |
| Q |
501 |
atgttttggcttattgtgaagctaagggaaggataaggaaaggtgataggatttggcaaattgcatttgggtctggatttaaatgtaacactgctgtttg |
600 |
Q |
| |
|
||| ||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19797184 |
atgagttggcatattgtgaagctaaaggaagaataagaaaaggtgataggatttggcaaattgcatttgggtctggatttaagtgtaacactgctgtttg |
19797283 |
T |
 |
| Q |
601 |
gtgtgctttaaggaatgttgatcc |
624 |
Q |
| |
|
|||||| ||||||||||||||||| |
|
|
| T |
19797284 |
gtgtgcattaaggaatgttgatcc |
19797307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 1 - 624
Target Start/End: Complemental strand, 19540360 - 19539738
Alignment:
| Q |
1 |
gcttgtttcaaattgtctctttcgcgtaggtggtgcagcaattttactctcaaacatttcttcagattctaaccgttcaaaatatctccttaaacacact |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| | |||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
19540360 |
gcttgtttcaaattgtctctttcgtgtaggtggtgcagccatcttactctcaaacatttccactgattctcaccgttcaaaatatcaccttaaacacact |
19540261 |
T |
 |
| Q |
101 |
gttcgtacacacaaaggttcacaagataattgttacaattcaatccttcaacaagaagatgaaacaaacaaaatcacaggaatttcactctcaaaacaac |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||| | ||||| |||||| | |
|
|
| T |
19540260 |
gttcctacacacaaaggttcacaagatacttgttacaattcagtctttcaaaaagaagatgaaacaaacaaaatcacaggagtatcactttcaaaagc-c |
19540162 |
T |
 |
| Q |
201 |
taatgagttcagctggttttgcacttaaagcaaacatcacaacacttggaaaatcagttttacctttactagaacaattaaaatatgctacaacttttgt |
300 |
Q |
| |
|
|||||||||| |||||| ||||||||||||| |||||||||||||||||||||| ||| | ||||||||||||||||| || | || | |||||||||| |
|
|
| T |
19540161 |
taatgagttcggctggtattgcacttaaagccaacatcacaacacttggaaaatatgttctgcctttactagaacaattcaagtttgtttcaacttttgt |
19540062 |
T |
 |
| Q |
301 |
agctaaaaagtattttaattccaaaattagggtttatacacctgattttaagctatgttttgagcatttttgtattcatactggtggaaaaggtgttcaa |
400 |
Q |
| |
|
| |||||| || ||||| |||| | | | |||||||||||||||||||| | |||||||| || |||||| ||||||| |||||||||| |||| |
|
|
| T |
19540061 |
tgttaaaaaatactttaacaacaaagtgaagatttatacacctgattttaagttgtgttttgaccacttttgtgttcatacgggtggaaaagcggttctt |
19539962 |
T |
 |
| Q |
401 |
gatgagatacaaaaagtgcttggattaagtgattggcaaattgagccttcaagaatgacactttatagatatggaaatacttcaagtagttctgtttggt |
500 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| ||| | |||||||||| |||||||||||||||||||| || ||||||||||||| |||||||| |
|
|
| T |
19539961 |
gatgagatacaaaaagtgctaggattaagtgattttcaattagagccttcaaagatgacactttatagatatggtaacacttcaagtagttttgtttggt |
19539862 |
T |
 |
| Q |
501 |
atgttttggcttattgtgaagctaagggaaggataaggaaaggtgataggatttggcaaattgcatttgggtctggatttaaatgtaacactgctgtttg |
600 |
Q |
| |
|
||| ||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
19539861 |
atgagttggcatattgtgaagctaaaggaagaataagaaaaggtgataggatttggcaaattgcatttgggtctagatttaagtgtaacactgctgtttg |
19539762 |
T |
 |
| Q |
601 |
gtgtgctttaaggaatgttgatcc |
624 |
Q |
| |
|
|||||| |||| |||||||||||| |
|
|
| T |
19539761 |
gtgtgcattaaagaatgttgatcc |
19539738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 1 - 624
Target Start/End: Complemental strand, 19672284 - 19671661
Alignment:
| Q |
1 |
gcttgtttcaaattgtctctttcgcgtaggtggtgcagcaattttactctcaaacatttcttcagattctaaccgttcaaaatatctccttaaacacact |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| | |||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
19672284 |
gcttgtttcaaattgtctctttcgtgtaggtggtgcagccatcttactctcaaacatttccaccgattctcaccgttcaaaatatcaccttaaacacact |
19672185 |
T |
 |
| Q |
101 |
gttcgtacacacaaaggttcacaagataattgttacaattcaatccttcaacaagaagatgaaacaaacaaaatcacaggaatttcactctcaaaacaac |
200 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||| | ||||| |||||| | | |
|
|
| T |
19672184 |
gttcgtacacacaaaggttcgcaagatacttgttacaattcagtctttcaaaaagaagatgaaacaaacaaaatcacaggagtatcactttcaaaagacc |
19672085 |
T |
 |
| Q |
201 |
taatgagttcagctggttttgcacttaaagcaaacatcacaacacttggaaaatcagttttacctttactagaacaattaaaatatgctacaacttttgt |
300 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||| ||||||||||||||| |||||||| |||| ||||||||| ||||||| | |||||||| | |
|
|
| T |
19672084 |
taatgagttcagctggttttgcccttaaagccaacatcccaacacttggaaaatttgttttaccattaccagaacaattcaaatatgtttcaacttttat |
19671985 |
T |
 |
| Q |
301 |
agctaaaaagtattttaattccaaaattagggtttatacacctgattttaagctatgttttgagcatttttgtattcatactggtggaaaaggtgttcaa |
400 |
Q |
| |
|
| | |||||| |||| |||| | | | |||||||||||||||||||| | |||||||| || |||||| ||||||| |||||||||| |||| |
|
|
| T |
19671984 |
tgtcagaaagtacattaacaacaaagtgatgatttatacacctgattttaagttgtgttttgaccacttttgtgttcatacgggtggaaaagcggttctt |
19671885 |
T |
 |
| Q |
401 |
gatgagatacaaaaagtgcttggattaagtgattggcaaattgagccttcaagaatgacactttatagatatggaaatacttcaagtagttctgtttggt |
500 |
Q |
| |
|
|||||||||||||||||||| || |||||||||| ||| | |||||||||| |||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
19671884 |
gatgagatacaaaaagtgctagggttaagtgattttcaattagagccttcaaagatgacactttatagatatggtaacacttcaagtagttctgtttggt |
19671785 |
T |
 |
| Q |
501 |
atgttttggcttattgtgaagctaagggaaggataaggaaaggtgataggatttggcaaattgcatttgggtctggatttaaatgtaacactgctgtttg |
600 |
Q |
| |
|
||| ||||| |||||||||||||| ||||| || | |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
19671784 |
atgagttggcatattgtgaagctaaaggaagagtatgaaaaggtgataggatttggcaaattgcatttgggtctggatttaagtgtaacactcctgtttg |
19671685 |
T |
 |
| Q |
601 |
gtgtgctttaaggaatgttgatcc |
624 |
Q |
| |
|
|||||| ||||||||||||||||| |
|
|
| T |
19671684 |
gtgtgcattaaggaatgttgatcc |
19671661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 334 - 387
Target Start/End: Original strand, 26453320 - 26453373
Alignment:
| Q |
334 |
ttatacacctgattttaagctatgttttgagcatttttgtattcatactggtgg |
387 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
26453320 |
ttatatacctgattttaagcttgcttttgagcatttttgtattcatgctggtgg |
26453373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 341 - 624
Target Start/End: Original strand, 34053144 - 34053427
Alignment:
| Q |
341 |
cctgattttaagctatgttttgagcatttttgtattcatactggtggaaaaggtgttcaagatgagatacaaaaagtgcttggattaagtgattggcaaa |
440 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||| ||||||||| || |||| ||||| || | ||| |||| | ||||||||||| | |
|
|
| T |
34053144 |
cctgattttaaattagcttttgagcatttttgtattcatgctggtggaagagctgttttggatgaattagagaaaaatcttgaccttagtgattggcata |
34053243 |
T |
 |
| Q |
441 |
ttgagccttcaagaatgacactttatagatatggaaatacttcaagtagttctgtttggtatgttttggcttattgtgaagctaagggaaggataaggaa |
540 |
Q |
| |
|
| || || |||||||||||||| |||||| ||| |||||||| |||||||| | ||||||| ||||||||| ||||||||| || ||||| || || |
|
|
| T |
34053244 |
tggaaccatcaagaatgacactaaatagatttggtaatacttctagtagttcattatggtatgaattggcttatactgaagctaaagggaggattagaaa |
34053343 |
T |
 |
| Q |
541 |
aggtgataggatttggcaaattgcatttgggtctggatttaaatgtaacactgctgtttggtgtgctttaaggaatgttgatcc |
624 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||| ||| |||| || |||| |||||||| |
|
|
| T |
34053344 |
aggtgataggacttggcaaattgcatttggttctggatttaaatgtaacagtgctgtgtggcgtgcattgaggaccgttgatcc |
34053427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 341 - 601
Target Start/End: Original strand, 15239445 - 15239705
Alignment:
| Q |
341 |
cctgattttaagctatgttttgagcatttttgtattcatactggtggaaaaggtgttcaagatgagatacaaaaagtgcttggattaagtgattggcaaa |
440 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||| ||||||||| || |||| |||||| | | ||| |||| |||||||||||||| | |
|
|
| T |
15239445 |
cctgattttaaattagcttttgagcatttttgtattcatgctggtggaagagctgttttggatgagttggagaaaaatcttgatttaagtgattggcata |
15239544 |
T |
 |
| Q |
441 |
ttgagccttcaagaatgacactttatagatatggaaatacttcaagtagttctgtttggtatgttttggcttattgtgaagctaagggaaggataaggaa |
540 |
Q |
| |
|
| || || ||||| |||||||| |||||| ||| || ||||| |||||||| | ||||||| ||||||||| ||||||||| || ||||| | || |
|
|
| T |
15239545 |
tggaaccatcaaggatgacactgaatagatttggtaacacttctagtagttcattgtggtatgaattggcttatactgaagctaaagggaggattaaaaa |
15239644 |
T |
 |
| Q |
541 |
aggtgataggatttggcaaattgcatttgggtctggatttaaatgtaacactgctgtttgg |
601 |
Q |
| |
|
||||||||| | |||||||||||||||||| ||||| ||||| ||||| | |||||||||| |
|
|
| T |
15239645 |
aggtgatagaacttggcaaattgcatttggttctggttttaagtgtaatagtgctgtttgg |
15239705 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 579
Target Start/End: Complemental strand, 23499244 - 23499099
Alignment:
| Q |
434 |
tggcaaattgagccttcaagaatgacactttatagatatggaaatacttcaagtagttctgtttggtatgttttggcttattgtgaagctaagggaagga |
533 |
Q |
| |
|
||||| || ||||| |||||||||||||||||| | | |||||| || || || ||||| ||||||| | |||||||| ||||| |||||||||| |
|
|
| T |
23499244 |
tggcatatggagccgtcaagaatgacactttatcgttttggaaacacctcgagcagttcgctttggtacgaattggcttacacggaagccaagggaagga |
23499145 |
T |
 |
| Q |
534 |
taaggaaaggtgataggatttggcaaattgcatttgggtctggatt |
579 |
Q |
| |
|
| | |||||| ||||| | |||||||| |||||||| || ||||| |
|
|
| T |
23499144 |
tcaagaaaggagatagaacatggcaaatagcatttggttcaggatt |
23499099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University