View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14938_low_7 (Length: 391)

Name: NF14938_low_7
Description: NF14938
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14938_low_7
NF14938_low_7
[»] chr7 (3 HSPs)
chr7 (87-379)||(46467611-46467904)
chr7 (87-303)||(15890361-15890576)
chr7 (97-323)||(8827056-8827282)
[»] scaffold0004 (2 HSPs)
scaffold0004 (80-323)||(353764-354012)
scaffold0004 (80-323)||(113044-113291)
[»] chr4 (3 HSPs)
chr4 (80-323)||(37439661-37439909)
chr4 (117-302)||(54001424-54001610)
chr4 (170-221)||(39072738-39072789)
[»] chr3 (4 HSPs)
chr3 (80-323)||(3274096-3274344)
chr3 (80-323)||(3277506-3277754)
chr3 (80-323)||(39925466-39925712)
chr3 (82-323)||(5026999-5027243)
[»] chr1 (4 HSPs)
chr1 (80-323)||(16851257-16851505)
chr1 (103-287)||(17364824-17365008)
chr1 (80-323)||(21198291-21198540)
chr1 (80-323)||(52986892-52987141)
[»] chr5 (3 HSPs)
chr5 (80-323)||(14404623-14404869)
chr5 (80-323)||(40665983-40666230)
chr5 (114-301)||(25685758-25685948)
[»] chr8 (3 HSPs)
chr8 (80-323)||(39038390-39038638)
chr8 (164-216)||(186513-186565)
chr8 (246-323)||(186377-186458)
[»] scaffold0303 (1 HSPs)
scaffold0303 (80-323)||(21060-21306)
[»] scaffold0097 (1 HSPs)
scaffold0097 (102-323)||(30832-31058)
[»] chr2 (3 HSPs)
chr2 (102-323)||(20727003-20727229)
chr2 (80-293)||(24780043-24780260)
chr2 (94-303)||(11023360-11023572)
[»] chr6 (4 HSPs)
chr6 (82-323)||(18677416-18677663)
chr6 (102-323)||(12352401-12352623)
chr6 (110-322)||(14859074-14859282)
chr6 (169-323)||(24170367-24170526)
[»] scaffold0882 (1 HSPs)
scaffold0882 (80-323)||(221-468)
[»] scaffold0766 (1 HSPs)
scaffold0766 (80-323)||(2935-3182)
[»] scaffold0031 (1 HSPs)
scaffold0031 (80-323)||(89161-89406)
[»] scaffold0047 (1 HSPs)
scaffold0047 (102-323)||(9070-9295)
[»] scaffold1744 (1 HSPs)
scaffold1744 (164-323)||(268-432)


Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 87 - 379
Target Start/End: Original strand, 46467611 - 46467904
Alignment:
Q  87 tactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattgggtgcgat 186  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  46467611 tactacatagttgagttgtagtacttatgcttcaatttgttatatctacacatttgatgtattattttattgttgtaatttcttttgtattgggtgcgat 46467710  T
Q  187 cccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagc 286  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||| |||||||||||||     
T  46467711 ctcaaggttttaagagaggtgatatctcttagttttagagactatcctacaaagcattgttttgtttggagagtgctcattatttataaaggttactagt 46467810  T
Q  287 ttatcctgtttaaaag--cggttagtgaaaatctcaaggatagttcccccttatgttaccattaaatttgaagtatgtgctcttaacattatatt 379  Q
    ||||||||||||||||   ||||||||||||||| |||||||| | |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  46467811 ttatcctgtttaaaagtttggttagtgaaaatcttaaggatagct-ccccttgtgttaccattaaattttaagtatgtgctcttaacattatatt 46467904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 87 - 303
Target Start/End: Original strand, 15890361 - 15890576
Alignment:
Q  87 tactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtattgggtgcga 185  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||||    
T  15890361 tactacatagttgagttgtag--cttgtgcttcaatttgttatatctacccatttggtgtattattttattgttgtaattcttatttgtattgggtgcga 15890458  T
Q  186 tcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactag 285  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| |  |||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  15890459 tcccaaggtttcaagagaggtgatatctcttggttttagagactcttttacaaaggactgttttgtttggagagtgctcgttatttgtaaaggttactag 15890558  T
Q  286 cttatcctgtttaaaagc 303  Q
    ||||||||  ||||||||    
T  15890559 cttatcctaattaaaagc 15890576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 97 - 323
Target Start/End: Original strand, 8827056 - 8827282
Alignment:
Q  97 ttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattgggtgcgatcccaaggttt 196  Q
    ||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||| | |||| ||||||| ||||| |||    
T  8827056 ttgagttgtagta-ttattcttcaatttgttatatctacacatttggtgtattattttattattgttttttcttt-gcattgtgtgcgattccaagattt 8827153  T
Q  197 aaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagcttatcctgtt 296  Q
     ||||||||||||||||||| | |||| || || | |||||||||||  ||||||||||||| |||||||  ||||||||| |||||||||| |||| ||    
T  8827154 caagagaggtgatatctcttgggtttataggctcttctacaaaagatatttttgtttggagaatgctcgtattttgtaaagtttactagcttctcctatt 8827253  T
Q  297 taaaagc--ggttagtgaaaatctcaagg 323  Q
    |||||||  || |||||||||||||||||    
T  8827254 taaaagcttggctagtgaaaatctcaagg 8827282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 80 - 323
Target Start/End: Complemental strand, 354012 - 353764
Alignment:
Q  80 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt-tcttttgtatt 177  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | |||||||||    
T  354012 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaattctattttgtatt 353913  T
Q  178 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 276  Q
    ||||||||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  353912 gggtgcgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 353813  T
Q  277 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  353812 ggttactagcttatcctgtttaaaagctaggttagtgaaaatctcaagg 353764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 80 - 323
Target Start/End: Complemental strand, 113291 - 113044
Alignment:
Q  80 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa-tttcttttgtattg 178  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||| |||||| | | ||||||||||    
T  113291 tattttatactacatagttgagttgtagtaattgtgcgtcaatttgttatatctacacatttggtgtattactttattattgtaactctattttgtattg 113192  T
Q  179 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 277  Q
    |||| |||||||| |||| ||||||||||||||||||| | || ||||||| | ||||||| |||||||||||||| |||||||||| |||||| |||||    
T  113191 ggtgtgatcccaaagtttcaagagaggtgatatctcttgggttaagagactcttctacaaaggattgttttgtttgaagagtgctcgcttatttataaag 113092  T
Q  278 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  113091 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 113044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 5e-75; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 80 - 323
Target Start/End: Original strand, 37439661 - 37439909
Alignment:
Q  80 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa--tttcttttgtatt 177  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||| ||||||   || |||||||||    
T  37439661 tattttatactacatagttgagttgtagtagttgtgcttgaatttgttatatctacacatttggtgtattgctttattattgtaactcttattttgtatt 37439760  T
Q  178 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaa 276  Q
    | ||||||||||||  ||| ||||||||||||||||||| | |||||||||| | ||||||| |||| ||||||||| |||||||||| |||||||||||    
T  37439761 gtgtgcgatcccaaattttcaagagaggtgatatctcttgggtttagagactcttctacaaaggattattttgtttgaagagtgctcgcttatttgtaaa 37439860  T
Q  277 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  37439861 ggttactagcttatcctgtttaaaagctaggttagtgaaaatctcaagg 37439909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 117 - 302
Target Start/End: Complemental strand, 54001610 - 54001424
Alignment:
Q  117 ttcaatttgttatatctacacatttggtgtattatttta--ttgttgtaatttcttttgtattgggtgcgatcccaaggtttaaagagaggtgatatctc 214  Q
    |||||||||||||||||||| |||||||||| |  ||||  ||||| || ||| ||| ||||||||||||||| |||||||  | |||| ||||||||||    
T  54001610 ttcaatttgttatatctacatatttggtgtaatcatttaaattgttata-tttatttggtattgggtgcgatctcaaggttccatgagatgtgatatctc 54001512  T
Q  215 ttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagcttatcctgtttaaaag 302  Q
    || |||||||| | | | ||||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||    
T  54001511 ttggttttagaaagtcttctacaaatgattgttttgtttggagaatgctcgttatttggaaaggttattagcttatcctatttaaaag 54001424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 39072789 - 39072738
Alignment:
Q  170 tttgtattgggtgcgatcccaaggtttaaagagaggtgatatctcttagttt 221  Q
    |||||||||| ||||||||||| |||| || |||||||||||||||| ||||    
T  39072789 tttgtattggatgcgatcccaaagtttcaaaagaggtgatatctcttggttt 39072738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 80 - 323
Target Start/End: Original strand, 3274096 - 3274344
Alignment:
Q  80 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtatt 177  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  | ||||||||    
T  3274096 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaattcttatttgtatt 3274195  T
Q  178 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 276  Q
    ||||| ||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  3274196 gggtgtgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 3274295  T
Q  277 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  3274296 ggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 3274344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 80 - 323
Target Start/End: Original strand, 3277506 - 3277754
Alignment:
Q  80 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtatt 177  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  | ||||||||    
T  3277506 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaattcttatttgtatt 3277605  T
Q  178 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 276  Q
    ||||| ||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  3277606 gggtgtgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 3277705  T
Q  277 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  3277706 ggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 3277754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 80 - 323
Target Start/End: Original strand, 39925466 - 39925712
Alignment:
Q  80 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattg 178  Q
    |||||||||||| |||||| |  ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||||||||    
T  39925466 tattttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgtaacta-ttttgtattg 39925564  T
Q  179 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaag 277  Q
    |||||||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  39925565 ggtgcgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaag 39925664  T
Q  278 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  39925665 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 39925712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 82 - 323
Target Start/End: Complemental strand, 5027243 - 5026999
Alignment:
Q  82 ttttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattggg 180  Q
    |||||||||| |||||| |  ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||| |  |||| |||||||    
T  5027243 ttttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattattttattattataacta-ttttatattggg 5027145  T
Q  181 tgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaaggt 279  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| || | ||||||| ||||||||||||||||||||||| | ||| |||||||| |    
T  5027144 tgcgatcccaaggtttcaagagaggtgatatctcttaggtttagaggctcttctacaaaggattgttttgtttggagagtgcttgctatcttgtaaagat 5027045  T
Q  280 tactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||    
T  5027044 tactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 5026999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 142; Significance: 2e-74; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 80 - 323
Target Start/End: Original strand, 16851257 - 16851505
Alignment:
Q  80 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtatt 177  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  | ||||||||    
T  16851257 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaattcttatttgtatt 16851356  T
Q  178 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 276  Q
    ||||| ||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  16851357 gggtgtgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 16851456  T
Q  277 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  16851457 ggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 16851505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 103 - 287
Target Start/End: Original strand, 17364824 - 17365008
Alignment:
Q  103 tgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattgggtgcgatcccaaggtttaaagag 202  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || | | ||||||||||||||||     
T  17364824 tgtagttcttgtgcttcaatatgttatatctacacatttgctgtatcattttattgttgtaatttcttttgtatttggggtggtcccaaggtttaaagaa 17364923  T
Q  203 aggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagct 287  Q
    |||||||||||||||| |||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17364924 aggtgatatctcttaggtttagagactcttctacaaatgattgttttgtttggagagtgctcgttatttgtaaaggttactagct 17365008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 80 - 323
Target Start/End: Original strand, 21198291 - 21198540
Alignment:
Q  80 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtat 176  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| |  | ||||||||    
T  21198291 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacatatttggtgtattactttattattgtaactcttattttgtat 21198390  T
Q  177 tgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaa 275  Q
     |||||||||||||| |||| |||||||||||||||||||   |||||||||| | ||||||| |||||||||||||| ||||||||||  |||||||||    
T  21198391 agggtgcgatcccaaagtttcaagagaggtgatatctcttgagtttagagactcttctacaaaggattgttttgtttgaagagtgctcgcatatttgtaa 21198490  T
Q  276 aggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  21198491 aggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 21198540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 80 - 323
Target Start/End: Complemental strand, 52987141 - 52986892
Alignment:
Q  80 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa--tttcttttgtat 176  Q
    |||||||||||| |||||| |  ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| ||| ||   || ||||||||    
T  52987141 tattttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgcaactcttattttgtat 52987042  T
Q  177 tgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgtta-tttgtaa 275  Q
    |||| || ||||||| |||| |||||||||||| |||||| | ||||||| || | ||||||| | |  |||||||||||||||||||| || |||||||    
T  52987041 tgggcgcaatcccaaagtttcaagagaggtgatctctcttgggtttagaggctcttctacaaagggtaattttgtttggagagtgctcgctattttgtaa 52986942  T
Q  276 aggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    ||||||||||||||||| ||||||||||   |||||||||||||||||||    
T  52986941 aggttactagcttatcccgtttaaaagctaagttagtgaaaatctcaagg 52986892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 8e-74; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 80 - 323
Target Start/End: Complemental strand, 14404869 - 14404623
Alignment:
Q  80 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattg 178  Q
    |||||||||||| |||||| |  ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||||||||    
T  14404869 tattttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgtaacta-ttttgtattg 14404771  T
Q  179 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaag 277  Q
    |||||||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  14404770 ggtgcgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaag 14404671  T
Q  278 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  14404670 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 14404623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 80 - 323
Target Start/End: Complemental strand, 40666230 - 40665983
Alignment:
Q  80 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt-tcttttgtattg 178  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||||||| || || |||||| |||||| | | ||||||||||    
T  40666230 tattttatactacatagttgagttgtagtaattgtgcgtcaatttattatatctacacatttggtatactactttattattgtaactctattttgtattg 40666131  T
Q  179 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 277  Q
    |||| ||||||||||||| |||||||||||||||||||   ||||||| || | ||||||| |||||||||||||| |||||| ||| ||||||||||||    
T  40666130 ggtgtgatcccaaggtttcaagagaggtgatatctcttgagtttagaggctcttctacaaatgattgttttgtttgaagagtgttcgcttatttgtaaag 40666031  T
Q  278 gttactagcttatcctgtttaaaag--cggttagtgaaaatctcaagg 323  Q
    |||| |||||||||| |||||||||   ||||||||||||||||||||    
T  40666030 gttattagcttatcccgtttaaaagttaggttagtgaaaatctcaagg 40665983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 114 - 301
Target Start/End: Original strand, 25685758 - 25685948
Alignment:
Q  114 tgcttcaatttgttatatctacacatttggtgtattatttta-ttgttgtaatttctt--ttgtattgggtgcgatcccaaggtttaaagagaggtgata 210  Q
    |||||||||||||| |||||||| |||||||||| | ||||| || ||||| ||||||  ||| ||| |||| ||||||||| ||| |||||||||||||    
T  25685758 tgcttcaatttgttttatctacatatttggtgtaatcttttaattattgta-tttcttatttgcatttggtgtgatcccaagatttcaagagaggtgata 25685856  T
Q  211 tctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaaggttactagcttatcctgtttaaaa 301  Q
    |||||| | ||||||| || | ||| ||| |||  ||| |||||||| ||||||| ||| |||||||||||||||| |||||||||||||||    
T  25685857 tctcttggatttagaggcttttctataaaggataatttcgtttggagtgtgctcgctatcttgtaaaggttactagattatcctgtttaaaa 25685948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 5e-72; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 80 - 323
Target Start/End: Original strand, 39038390 - 39038638
Alignment:
Q  80 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtatt 177  Q
    |||||||||||| |||||| |  ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||  | ||||||||    
T  39038390 tattttatactacatagtttatcttgtagttcttatgcttcaatttgttatatctacacatttggtgtattactttattattgtaattcttatttgtatt 39038489  T
Q  178 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 276  Q
    ||||| ||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  39038490 gggtgtgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 39038589  T
Q  277 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  39038590 ggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 39038638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 186565 - 186513
Alignment:
Q  164 atttcttttgtattgggtgcgatcccaaggtttaaagagaggtgatatctctt 216  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  186565 atttcttttgtattgggtgcgatcccaaagtttcaagagaggtgatatttctt 186513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 186458 - 186377
Alignment:
Q  246 ttttgtttggagagtgctcgttattt-gtaaaggtt-actagcttatcctgtttaaaagcg--gttagtgaaaatctcaagg 323  Q
    |||||||||||||||||| | ||||| ||||||||| ||||| |||||| || |||||||   |||||||||||||||||||    
T  186458 ttttgtttggagagtgcttgctattttgtaaaggtttactagtttatcccgtataaaagctaagttagtgaaaatctcaagg 186377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 80 - 323
Target Start/End: Original strand, 21060 - 21306
Alignment:
Q  80 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattg 178  Q
    |||||||||||| |||||| |  ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||||||||    
T  21060 tattttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgtaacta-ttttgtattg 21158  T
Q  179 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaag 277  Q
    |||||||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||| | ||| ||||||||    
T  21159 ggtgcgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctagctatcttgtaaag 21258  T
Q  278 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  21259 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 21306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 102 - 323
Target Start/End: Complemental strand, 31058 - 30832
Alignment:
Q  102 ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtattgggtgcgatcccaaggtttaaa 199  Q
    |||||||||||||| |||||||||||||||||| | ||||||||||||| |||||| |||||| |  | ||||||||||||||||||||||| |||| ||    
T  31058 ttgtagtacttgtgtttcaatttgttatatctatatatttggtgtattactttattattgtaactcttattttgtattgggtgcgatcccaaagtttcaa 30959  T
Q  200 gagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgttta 298  Q
    ||||||||||||||||| | |||||||||| |  |||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  30958 gagaggtgatatctcttgggtttagagactcttttacaaaggattgttttgtttgaagagtgctcgcttatttgtaaaggttactagcttatcccgttta 30859  T
Q  299 aaagc--ggttagtgaaaatctcaagg 323  Q
    |||||  ||||||||||||||||||||    
T  30858 aaagctaggttagtgaaaatctcaagg 30832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 102 - 323
Target Start/End: Complemental strand, 20727229 - 20727003
Alignment:
Q  102 ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtattgggtgcgatcccaaggtttaaa 199  Q
    |||||||||||||| |||||||||||||||||| | ||||||||||||| |||||| |||||| |  | ||||||||||||||||||||||| |||| ||    
T  20727229 ttgtagtacttgtgtttcaatttgttatatctatatatttggtgtattactttattattgtaactcttattttgtattgggtgcgatcccaaagtttcaa 20727130  T
Q  200 gagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgttta 298  Q
    ||||||||||||||||| | |||||||||| |  |||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  20727129 gagaggtgatatctcttgggtttagagactcttttacaaaggattgttttgtttgaagagtgctcgcttatttgtaaaggttactagcttatcccgttta 20727030  T
Q  299 aaagc--ggttagtgaaaatctcaagg 323  Q
    |||||  ||||||||||||||||||||    
T  20727029 aaagctaggttagtgaaaatctcaagg 20727003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 80 - 293
Target Start/End: Original strand, 24780043 - 24780260
Alignment:
Q  80 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtat 176  Q
    |||||||||||| |||||| |  |||||||  |||||||| ||||||||||||||||||||||||||||||| |||||| |||||| |  | ||||||||    
T  24780043 tattttatactacatagtttatcttgtagtttttgtgctttaatttgttatatctacacatttggtgtattactttattattgtaactcttattttgtat 24780142  T
Q  177 tgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaa 275  Q
    ||||||||||||||| || | |||||||||||||||||||   ||||||| || | ||||||| ||||||||||||||||||||| ||| ||| ||||||    
T  24780143 tgggtgcgatcccaaagtatcaagagaggtgatatctcttgagtttagaggctcttctacaaatgattgttttgtttggagagtgttcgctatcttgtaa 24780242  T
Q  276 aggttactagcttatcct 293  Q
    ||||||||||||||||||    
T  24780243 aggttactagcttatcct 24780260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 94 - 303
Target Start/End: Original strand, 11023360 - 11023572
Alignment:
Q  94 tagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtattgggtgcg--atccca 190  Q
    ||||||||||||||||||| ||||||||||||||||||||| | ||||| |||||||| |  || |||||| |  | ||||||||||||| |  ||||||    
T  11023360 tagttgagttgtagtacttatgcttcaatttgttatatctatatatttgatgtattatatccttattgtaaatcttatttgtattgggtgtgtgatccca 11023459  T
Q  191 aggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagcttat 290  Q
    |||||| |||||| || |||| |||| |||||||||||| |  ||||||  ||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  11023460 aggtttcaagagaagttatatatcttggttttagagactcttttacaaagaattgttttgtttgaagagtgctcattatttgtaaatgttactagcttat 11023559  T
Q  291 cctgtttaaaagc 303  Q
    |||  ||||||||    
T  11023560 cctccttaaaagc 11023572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 7e-65; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 82 - 323
Target Start/End: Original strand, 18677416 - 18677663
Alignment:
Q  82 ttttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtattg 178  Q
    |||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |  | ||||||||||    
T  18677416 ttttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaactcttattttgtattg 18677515  T
Q  179 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 277  Q
    |||| |||||||| |||| ||||||||||||||||||| | |||||||||| | ||||||| | |||||||||||| |||||||||| |||||||||||     
T  18677516 ggtgtgatcccaaagtttcaagagaggtgatatctcttgggtttagagactcttctacaaaggtttgttttgtttgaagagtgctcgtttatttgtaaat 18677615  T
Q  278 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
     |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  18677616 attactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 18677663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 102 - 323
Target Start/End: Original strand, 12352401 - 12352623
Alignment:
Q  102 ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa--tttcttttgtattgggtgcgatcccaaggtttaaa 199  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| |||| |   || |||||||||||||| |||||||| |||| ||    
T  12352401 ttgtagttcttgtgcttcaacttgttatatctacacatttggtgtattactttattattgttactcttattttgtattgggtgtgatcccaaagtttcaa 12352500  T
Q  200 gagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgttta 298  Q
    ||||||||||||||||| | ||||||||||   || |||| |||||||||||||| |||||||||| |||||||| || ||||||||||||||| |||||    
T  12352501 gagaggtgatatctcttgggtttagagact---cttcaaaggattgttttgtttgaagagtgctcgcttatttgt-aatgttactagcttatcccgttta 12352596  T
Q  299 aaagc--ggttagtgaaaatctcaagg 323  Q
    |||||  ||||||||||||||||||||    
T  12352597 aaagctaggttagtgaaaatctcaagg 12352623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 110 - 322
Target Start/End: Original strand, 14859074 - 14859282
Alignment:
Q  110 cttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtattgggtgcgatcccaaggtttaaagagaggtg 207  Q
    ||||||||||||||||||||||||||| ||||||||| ||  |||||| |||||| |  | |||||||||||||| |||||| | |||| ||||||||||    
T  14859074 cttgtgcttcaatttgttatatctacatatttggtgtctttctttattattgtaactcttattttgtattgggtgtgatccctaagtttcaagagaggtg 14859173  T
Q  208 atatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgtttaaaag--cg 304  Q
    ||||||||| | ||||||||||   || |     ||||||||||||| |||||||||| ||||||| ||||||||    ||||||| |||||||||   |    
T  14859174 atatctcttgggtttagagactcatcttc-----attgttttgtttgaagagtgctcgtttatttgcaaaggtta----cttatcccgtttaaaagttag 14859264  T
Q  305 gttagtgaaaatctcaag 322  Q
    ||||||||||||||||||    
T  14859265 gttagtgaaaatctcaag 14859282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 323
Target Start/End: Original strand, 24170367 - 24170526
Alignment:
Q  169 ttttgtattgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgtta 268  Q
    ||||||||| |||||||||| ||||||| || ||||||||||| |||| | |||| ||  | | ||| ||| |||  |||||||||| ||||||| | ||    
T  24170367 ttttgtattaggtgcgatcctaaggtttcaaaagaggtgatatatcttgggtttaaaggttcttctataaaggataattttgtttggggagtgctagcta 24170466  T
Q  269 t-ttgtaaaggttac--tagcttatcctgtttaaaag--cggttagtgaaaatctcaagg 323  Q
    | |||||||||||||  ||| ||||| ||||||||||   ||||||||||||||||||||    
T  24170467 tcttgtaaaggttactatagtttatcttgtttaaaagtttggttagtgaaaatctcaagg 24170526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0882 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0882
Description:

Target: scaffold0882; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 80 - 323
Target Start/End: Complemental strand, 468 - 221
Alignment:
Q  80 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa-tttcttttgtattg 178  Q
    |||||||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| |||||| |||||| | | | ||||||||    
T  468 tattttatactacatagttgagttgtagtaattgtacgtcaatttgttatatctacacatttggtgtattactttattattgtaactctatcttgtattg 369  T
Q  179 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 277  Q
    |||| |||| |||||||| |||||| |||||||||||| | ||||||  || | ||||||| |||||||||||||| |||||||| | ||||||||||||    
T  368 ggtgtgatctcaaggtttcaagagatgtgatatctcttgggtttagaagctcttctacaaaggattgttttgtttgaagagtgcttgtttatttgtaaag 269  T
Q  278 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    |||||| |||||||| ||||||||||  ||||| ||||||||||||||    
T  268 gttactggcttatcccgtttaaaagctaggttaatgaaaatctcaagg 221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 80 - 323
Target Start/End: Original strand, 2935 - 3182
Alignment:
Q  80 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa-tttcttttgtattg 178  Q
    |||||||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| |||||| |||||| | | | ||||||||    
T  2935 tattttatactacatagttgagttgtagtaattgtacgtcaatttgttatatctacacatttggtgtattactttattattgtaactctatcttgtattg 3034  T
Q  179 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 277  Q
    |||| |||| |||||||| |||||| |||||||||||| | ||||||  || | ||||||| |||||||||||||| |||||||| | ||||||||||||    
T  3035 ggtgtgatctcaaggtttcaagagatgtgatatctcttgggtttagaagctcttctacaaaggattgttttgtttgaagagtgcttgtttatttgtaaag 3134  T
Q  278 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    |||||| |||||||| ||||||||||  ||||| ||||||||||||||    
T  3135 gttactggcttatcccgtttaaaagctaggttaatgaaaatctcaagg 3182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 80 - 323
Target Start/End: Complemental strand, 89406 - 89161
Alignment:
Q  80 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattg 178  Q
    |||||||||||| |||||| |  ||||||| |||||| ||||||| || ||||||||||||||||||||||| |||||| |||||| |  ||||||||||    
T  89406 tattttatactacatagtttatcttgtagttcttgtgtttcaatt-gtaatatctacacatttggtgtattactttattattgtaacta-ttttgtattg 89309  T
Q  179 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaag 277  Q
    ||||| |||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||| ||||||||||||||||||||| ||| ||||||||    
T  89308 ggtgcaatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggatcgttttgtttggagagtgctcgctatcttgtaaag 89209  T
Q  278 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 323  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  89208 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 89161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 102 - 323
Target Start/End: Original strand, 9070 - 9295
Alignment:
Q  102 ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt-tcttttgtattgggtgcgatcccaaggtttaaag 200  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| | | |||||||||||||| | ||||||||||| |||    
T  9070 ttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgtaactctattttgtattgggtgtgttcccaaggttttaag 9169  T
Q  201 agaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgtttaa 299  Q
    ||||| ||||||| || | ||||||| || | ||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| | ||||    
T  9170 agaggcgatatcttttgggtttagaggctcttctacaaaggattgttttgtttgaagagtgctcgcttatttgtaaaggttactagcttatcccgattaa 9269  T
Q  300 aagc--ggttagtgaaaatctcaagg 323  Q
    ||||  ||||| ||||||||||||||    
T  9270 aagctaggttaatgaaaatctcaagg 9295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1744 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1744
Description:

Target: scaffold1744; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 323
Target Start/End: Complemental strand, 432 - 268
Alignment:
Q  164 atttcttttgtattgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgct 263  Q
    ||||||||||| ||||||| |||||||| |||| |||||||||||||||||||   ||||||| || | ||||||| | |  ||||||||||||||||||    
T  432 atttcttttgtgttgggtgtgatcccaaagtttcaagagaggtgatatctcttgagtttagaggctcttctacaaagggtaattttgtttggagagtgct 333  T
Q  264 cgtta--tttgtaaaggttactagcttatcctgtttaaaa-gcg--gttagtgaaaatctcaagg 323  Q
    || ||  |||||||||||||||||||||||| |||||||| ||   |||||||||||||||||||    
T  332 cgctaattttgtaaaggttactagcttatcccgtttaaaaagctaagttagtgaaaatctcaagg 268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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