View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14939_high_10 (Length: 271)
Name: NF14939_high_10
Description: NF14939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14939_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 9 - 250
Target Start/End: Original strand, 44436321 - 44436564
Alignment:
| Q |
9 |
gagaagcataggaacgtattttttgctgcgaatgtcatcttctatgaggatgatgctctaccacaattctacatacatctctattgattttcctctatat |
108 |
Q |
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| T |
44436321 |
gagaaacataggaacgtattttttgctgcgaatgtcatcttctatgaggaagatgctctaccacaattctacatacatctctattgattttcctctatat |
44436420 |
T |
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| Q |
109 |
atctttttgccatactaacatttgaagcctcctaaagcagctgcgtaacagtatacttcaaaggctagattagaagcgtgattttttctcac--caccaa |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
44436421 |
atctttttgccatactaacatttgaagcctcctaaagcagctgcgtaacagtatacttcaaaggctagattagaagcgtgattttttctcaccacaccaa |
44436520 |
T |
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| Q |
207 |
ggcctgcacaatagataaaatgatgggaaaacaaaaattgccta |
250 |
Q |
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| T |
44436521 |
ggcctgcacaatagataaaatgatgggaaaacaaaaattgccta |
44436564 |
T |
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