View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14940_low_14 (Length: 333)
Name: NF14940_low_14
Description: NF14940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14940_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 8564715 - 8564401
Alignment:
| Q |
1 |
gcctgtaaaccaggctccaaaccttgtagcttcattctcttgagaagcaacaaaacttcacataaatccccaatctgagcatatgcagataacaaagaat |
100 |
Q |
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| T |
8564715 |
gcctgtaaaccaggctccaaaccttgtagcttcattctcttgagaagcaacaaaacttcacataaatccccaatctgagcatatgcagataacaaagaat |
8564616 |
T |
|
| Q |
101 |
tccacgaaacaacatctctttgatccataaattcaaacaatttcctacaatcttcaatacttccacatttcccgtacaaattcaccatagaatttaacaa |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8564615 |
tccacgaaacaacatctcttcgatccataaattcaaacaatttcctacaatcttcaatacttccacatttcccgtacaaattcaccatagaatttaacaa |
8564516 |
T |
|
| Q |
201 |
attcaaatctgacataaacccataaaaaattgcacaaccatgcaaacactgcacataagaaacctccgaaactccaaacaacaaactcagcaaagtaaca |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
8564515 |
attcaaatctgacataaacccataaaaaattgcacaaccatgcaaacactgcacataaggaacctccgaaactccaaacaacaaactcagcaaagtaaca |
8564416 |
T |
|
| Q |
301 |
ctactcggttgaatt |
315 |
Q |
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||||||||||||||| |
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| T |
8564415 |
ctactcggttgaatt |
8564401 |
T |
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