View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14940_low_28 (Length: 219)
Name: NF14940_low_28
Description: NF14940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14940_low_28 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 39014318 - 39014529
Alignment:
| Q |
1 |
ttggaccgtgattttgagggtcaaaaccataaattatatgggcttcttctttgatatctgccctagtttgagaaactacattcagtttatttttcttagt |
100 |
Q |
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| T |
39014318 |
ttggaccgtgattttgagggtcaaaaccataaattatacgggcttcttctttgatatctgccctagtttgagaaactacattcagtttatttttcttagt |
39014417 |
T |
|
| Q |
101 |
gtggatgttagtgactatcttgctgcaaacaatttctttgttaagttgattagtagtgtgaaatttattcaattgtgcggtattgtttatggtctccctg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39014418 |
gtggatgttagtgactatcttgctgcaaacaatttctttgttaagttgattagtagtgtgaaatttattcaattgtgcggtattgtttatggtctccctg |
39014517 |
T |
|
| Q |
201 |
tctatacttctc |
212 |
Q |
| |
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|||||||||||| |
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| T |
39014518 |
tctatacttctc |
39014529 |
T |
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