View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14942_high_16 (Length: 238)
Name: NF14942_high_16
Description: NF14942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14942_high_16 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 21 - 238
Target Start/End: Complemental strand, 36770456 - 36770235
Alignment:
| Q |
21 |
tagatttaacttgatatacatatatagcatccagtggaaagaagggacagaaaattcttcattgacgcaagttgaagactttcaaaattatatactaaga |
120 |
Q |
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| T |
36770456 |
tagatttaacttgatatacatatatagtatccagtggaaagaagggacagaaaattcttcattgacgcaggttgaagactttcaaaattacatacgaaga |
36770357 |
T |
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| Q |
121 |
ccaggtcaaatac---at-tatattagaatagtttgcacctcaatttctgtttggcccttacagtggtctataatctatatatattattacataagacta |
216 |
Q |
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|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
36770356 |
ccaggtcaaataatctatatatattagaatagtttgcacctcaatttctgtttggcccttacagtggtctataatctatatatattattacacaagacta |
36770257 |
T |
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| Q |
217 |
attcatatggaagctacatttt |
238 |
Q |
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|||||||||||||||||||||| |
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| T |
36770256 |
attcatatggaagctacatttt |
36770235 |
T |
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