View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14943_low_23 (Length: 254)

Name: NF14943_low_23
Description: NF14943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14943_low_23
NF14943_low_23
[»] chr8 (35 HSPs)
chr8 (34-254)||(28737713-28737933)
chr8 (34-191)||(3892220-3892377)
chr8 (48-160)||(37372539-37372651)
chr8 (34-191)||(27108878-27109035)
chr8 (34-183)||(20182653-20182802)
chr8 (48-183)||(27968378-27968513)
chr8 (34-183)||(27886463-27886612)
chr8 (34-183)||(27945121-27945270)
chr8 (34-183)||(28025364-28025513)
chr8 (34-191)||(7411880-7412037)
chr8 (34-151)||(40412861-40412978)
chr8 (34-191)||(5818036-5818193)
chr8 (34-192)||(41098650-41098808)
chr8 (49-156)||(8170804-8170911)
chr8 (38-191)||(32858-33014)
chr8 (39-132)||(43770868-43770961)
chr8 (36-130)||(28875726-28875820)
chr8 (52-145)||(32638391-32638484)
chr8 (39-132)||(32877918-32878011)
chr8 (36-130)||(5540285-5540379)
chr8 (55-145)||(45216400-45216490)
chr8 (39-128)||(19436717-19436806)
chr8 (39-128)||(19572866-19572955)
chr8 (39-132)||(25022615-25022708)
chr8 (52-131)||(6028954-6029033)
chr8 (39-130)||(42949532-42949623)
chr8 (52-132)||(19947552-19947632)
chr8 (65-132)||(4246790-4246857)
chr8 (70-159)||(32425226-32425316)
chr8 (52-108)||(12579706-12579762)
chr8 (39-131)||(32760217-32760308)
chr8 (52-131)||(37669431-37669509)
chr8 (39-117)||(36484299-36484377)
chr8 (83-123)||(38389011-38389051)
chr8 (65-124)||(34900556-34900615)
[»] chr1 (39 HSPs)
chr1 (34-191)||(10822650-10822807)
chr1 (34-190)||(14167326-14167482)
chr1 (37-191)||(24851748-24851902)
chr1 (38-191)||(9528553-9528706)
chr1 (34-182)||(32380763-32380911)
chr1 (34-164)||(29168230-29168360)
chr1 (34-168)||(32797470-32797604)
chr1 (34-191)||(34432120-34432277)
chr1 (34-191)||(9781898-9782057)
chr1 (48-183)||(37922478-37922613)
chr1 (34-191)||(29862053-29862213)
chr1 (48-151)||(3707995-3708098)
chr1 (34-130)||(36551722-36551818)
chr1 (34-183)||(34096257-34096407)
chr1 (36-132)||(28948368-28948464)
chr1 (39-191)||(13012560-13012716)
chr1 (39-132)||(3427707-3427800)
chr1 (39-132)||(14334619-14334712)
chr1 (34-129)||(24589807-24589901)
chr1 (39-132)||(31652979-31653072)
chr1 (83-191)||(47654942-47655050)
chr1 (39-132)||(37346520-37346611)
chr1 (91-164)||(15417699-15417772)
chr1 (35-132)||(28658561-28658658)
chr1 (39-131)||(43190108-43190200)
chr1 (36-132)||(5985037-5985132)
chr1 (36-145)||(25257454-25257560)
chr1 (49-116)||(33040711-33040777)
chr1 (93-183)||(10763917-10764009)
chr1 (98-150)||(2472682-2472734)
chr1 (34-78)||(38218733-38218777)
chr1 (65-124)||(6916049-6916108)
chr1 (65-132)||(8133033-8133100)
chr1 (136-191)||(14334549-14334604)
chr1 (49-96)||(15417920-15417967)
chr1 (65-124)||(38331311-38331370)
chr1 (104-183)||(41675743-41675822)
chr1 (65-124)||(52894888-52894947)
chr1 (136-187)||(37346626-37346678)
[»] chr4 (37 HSPs)
chr4 (34-191)||(47607357-47607514)
chr4 (34-191)||(1177233-1177391)
chr4 (34-164)||(31945932-31946062)
chr4 (34-164)||(40694353-40694483)
chr4 (34-183)||(3108988-3109137)
chr4 (48-191)||(44521743-44521886)
chr4 (48-191)||(51859051-51859194)
chr4 (34-159)||(52721663-52721789)
chr4 (34-187)||(24784654-24784807)
chr4 (34-187)||(24823459-24823612)
chr4 (49-164)||(30683380-30683495)
chr4 (34-191)||(36511635-36511795)
chr4 (34-191)||(55900831-55900988)
chr4 (35-183)||(24793415-24793563)
chr4 (49-164)||(7952831-7952946)
chr4 (48-164)||(42630175-42630291)
chr4 (48-187)||(17892530-17892669)
chr4 (53-164)||(49470581-49470692)
chr4 (55-164)||(36943974-36944083)
chr4 (34-183)||(39957974-39958123)
chr4 (38-191)||(51675045-51675197)
chr4 (49-156)||(258789-258896)
chr4 (55-145)||(5325197-5325287)
chr4 (34-182)||(14614769-14614910)
chr4 (34-183)||(2586602-2586750)
chr4 (39-132)||(43509600-43509693)
chr4 (39-145)||(52573035-52573141)
chr4 (36-145)||(14795857-14795966)
chr4 (52-132)||(5835291-5835371)
chr4 (90-164)||(37992295-37992369)
chr4 (39-145)||(41146454-41146559)
chr4 (52-132)||(28377360-28377440)
chr4 (65-131)||(3402762-3402828)
chr4 (65-124)||(8063282-8063341)
chr4 (92-130)||(53323204-53323242)
chr4 (65-130)||(31227205-31227270)
chr4 (92-128)||(22492932-22492968)
[»] chr2 (34 HSPs)
chr2 (34-191)||(4355568-4355725)
chr2 (34-191)||(1005768-1005925)
chr2 (34-191)||(4562045-4562202)
chr2 (34-191)||(14824395-14824552)
chr2 (38-191)||(24585791-24585945)
chr2 (34-183)||(31235869-31236018)
chr2 (34-191)||(44156854-44157010)
chr2 (48-191)||(5588294-5588437)
chr2 (49-187)||(34146462-34146600)
chr2 (34-164)||(40536500-40536630)
chr2 (34-181)||(3564106-3564252)
chr2 (34-191)||(28746365-28746523)
chr2 (34-183)||(3545264-3545413)
chr2 (34-183)||(45158859-45159008)
chr2 (34-166)||(35996812-35996944)
chr2 (36-191)||(2319553-2319707)
chr2 (34-164)||(12206270-12206400)
chr2 (60-191)||(8482648-8482779)
chr2 (34-151)||(10573800-10573918)
chr2 (48-183)||(35342603-35342738)
chr2 (48-183)||(40431741-40431876)
chr2 (39-132)||(6125034-6125127)
chr2 (52-132)||(12819663-12819743)
chr2 (39-191)||(18301373-18301529)
chr2 (36-130)||(22485132-22485226)
chr2 (87-182)||(9293649-9293744)
chr2 (52-130)||(40308013-40308091)
chr2 (52-131)||(6496849-6496927)
chr2 (34-97)||(14216940-14217003)
chr2 (52-107)||(20537214-20537269)
chr2 (34-125)||(21104817-21104907)
chr2 (39-125)||(5371430-5371516)
chr2 (36-145)||(4169682-4169790)
chr2 (65-132)||(7807045-7807112)
[»] chr7 (42 HSPs)
chr7 (34-191)||(23078792-23078949)
chr7 (34-191)||(554595-554752)
chr7 (34-183)||(44270003-44270152)
chr7 (34-191)||(48153798-48153955)
chr7 (34-191)||(21409643-21409800)
chr7 (34-170)||(36757695-36757831)
chr7 (34-170)||(36767219-36767355)
chr7 (48-191)||(24956502-24956643)
chr7 (65-191)||(23969862-23969988)
chr7 (34-183)||(1399952-1400100)
chr7 (34-183)||(15878107-15878256)
chr7 (34-183)||(19820681-19820830)
chr7 (34-191)||(38064946-38065102)
chr7 (34-170)||(36763475-36763610)
chr7 (48-132)||(11058748-11058832)
chr7 (34-170)||(35160162-35160298)
chr7 (52-132)||(47719856-47719936)
chr7 (34-159)||(9249994-9250120)
chr7 (34-159)||(9283544-9283670)
chr7 (34-159)||(25969813-25969939)
chr7 (49-191)||(33454345-33454487)
chr7 (34-151)||(21180133-21180250)
chr7 (49-168)||(35136305-35136424)
chr7 (61-164)||(44959047-44959150)
chr7 (34-183)||(36413630-36413779)
chr7 (53-145)||(36661313-36661405)
chr7 (36-132)||(47237911-47238007)
chr7 (48-162)||(40053573-40053687)
chr7 (52-132)||(16563931-16564011)
chr7 (52-132)||(16601651-16601731)
chr7 (52-132)||(26773269-26773349)
chr7 (39-190)||(19510904-19511059)
chr7 (39-132)||(8029159-8029252)
chr7 (52-132)||(1042756-1042836)
chr7 (36-130)||(39521427-39521521)
chr7 (34-107)||(26973398-26973471)
chr7 (39-130)||(4292020-4292111)
chr7 (55-145)||(27397298-27397387)
chr7 (136-191)||(4291948-4292003)
chr7 (65-132)||(16851165-16851232)
chr7 (65-124)||(40096531-40096590)
chr7 (52-145)||(11830537-11830629)
[»] chr5 (40 HSPs)
chr5 (34-191)||(3934492-3934649)
chr5 (34-191)||(26691895-26692052)
chr5 (34-191)||(26961627-26961784)
chr5 (48-191)||(21251740-21251883)
chr5 (34-191)||(25749862-25750019)
chr5 (34-191)||(26716529-26716686)
chr5 (34-191)||(26986269-26986426)
chr5 (34-191)||(1795649-1795807)
chr5 (34-191)||(3701342-3701498)
chr5 (34-191)||(7629302-7629459)
chr5 (34-191)||(27938415-27938572)
chr5 (48-191)||(17137953-17138094)
chr5 (49-164)||(39796664-39796779)
chr5 (36-191)||(14836588-14836744)
chr5 (34-183)||(43357465-43357613)
chr5 (34-191)||(1921038-1921196)
chr5 (34-132)||(42365806-42365904)
chr5 (62-191)||(15066469-15066598)
chr5 (48-182)||(6242727-6242861)
chr5 (34-159)||(30777093-30777219)
chr5 (34-151)||(18001661-18001778)
chr5 (61-191)||(11907569-11907699)
chr5 (65-151)||(34032668-34032754)
chr5 (48-153)||(5612170-5612275)
chr5 (51-164)||(5722282-5722395)
chr5 (36-132)||(39689890-39689986)
chr5 (34-117)||(9728093-9728176)
chr5 (33-191)||(27085627-27085788)
chr5 (34-130)||(41233634-41233730)
chr5 (36-130)||(30919009-30919103)
chr5 (34-119)||(30284283-30284368)
chr5 (52-132)||(10657308-10657388)
chr5 (39-130)||(5985640-5985731)
chr5 (49-132)||(9654065-9654148)
chr5 (34-127)||(22738170-22738266)
chr5 (36-130)||(26794161-26794255)
chr5 (34-95)||(11694466-11694527)
chr5 (65-132)||(9793159-9793226)
chr5 (34-97)||(35746099-35746162)
chr5 (36-132)||(1638952-1639045)
[»] chr3 (47 HSPs)
chr3 (34-183)||(25701049-25701198)
chr3 (34-192)||(7899402-7899560)
chr3 (34-191)||(20509839-20509996)
chr3 (48-191)||(19878800-19878942)
chr3 (34-191)||(22289427-22289583)
chr3 (34-183)||(52684613-52684762)
chr3 (35-191)||(45056985-45057141)
chr3 (53-164)||(25322219-25322330)
chr3 (34-164)||(13352878-13353008)
chr3 (34-151)||(212812-212929)
chr3 (34-183)||(28968797-28968946)
chr3 (48-183)||(21006060-21006195)
chr3 (39-191)||(35390141-35390301)
chr3 (48-183)||(47642292-47642427)
chr3 (38-160)||(2122996-2123118)
chr3 (48-132)||(2566966-2567050)
chr3 (48-147)||(38888794-38888893)
chr3 (48-153)||(21157457-21157562)
chr3 (34-122)||(13748203-13748291)
chr3 (34-157)||(983482-983605)
chr3 (39-132)||(22311191-22311284)
chr3 (34-191)||(48333218-48333375)
chr3 (36-130)||(42464300-42464394)
chr3 (39-132)||(28882243-28882336)
chr3 (52-145)||(48123674-48123767)
chr3 (39-115)||(30787274-30787350)
chr3 (49-183)||(29916056-29916191)
chr3 (49-183)||(29965209-29965344)
chr3 (36-130)||(10224319-10224413)
chr3 (65-150)||(19421741-19421826)
chr3 (52-145)||(25936254-25936347)
chr3 (34-130)||(28548363-28548459)
chr3 (38-114)||(45347907-45347983)
chr3 (52-132)||(50286923-50287003)
chr3 (34-97)||(41741850-41741913)
chr3 (55-145)||(52505002-52505092)
chr3 (49-157)||(47750631-47750739)
chr3 (39-107)||(33241220-33241288)
chr3 (34-191)||(39664671-39664831)
chr3 (65-132)||(1678869-1678936)
chr3 (48-114)||(19349318-19349384)
chr3 (39-145)||(45532226-45532331)
chr3 (34-191)||(48334161-48334318)
chr3 (39-132)||(52121625-52121718)
chr3 (39-131)||(22610440-22610531)
chr3 (65-132)||(1528892-1528959)
chr3 (65-145)||(28705590-28705670)
[»] chr6 (21 HSPs)
chr6 (34-191)||(6707723-6707880)
chr6 (34-187)||(32018378-32018531)
chr6 (35-191)||(11105565-11105721)
chr6 (34-191)||(10894201-10894359)
chr6 (34-191)||(19128409-19128567)
chr6 (34-164)||(27084257-27084387)
chr6 (34-191)||(13045065-13045221)
chr6 (34-125)||(13061058-13061149)
chr6 (34-159)||(3212878-3213004)
chr6 (34-164)||(3299342-3299472)
chr6 (34-191)||(7255199-7255353)
chr6 (36-145)||(7187938-7188047)
chr6 (34-117)||(234645-234728)
chr6 (34-156)||(26327608-26327730)
chr6 (39-132)||(32130222-32130315)
chr6 (60-127)||(13607490-13607557)
chr6 (39-132)||(8357743-8357835)
chr6 (60-191)||(22988838-22988966)
chr6 (60-191)||(23799430-23799558)
chr6 (34-114)||(4153245-4153325)
chr6 (65-124)||(1036001-1036060)
[»] scaffold0005 (2 HSPs)
scaffold0005 (34-182)||(202466-202607)
scaffold0005 (36-145)||(43765-43874)
[»] scaffold0250 (1 HSPs)
scaffold0250 (52-187)||(5926-6070)
[»] scaffold0060 (1 HSPs)
scaffold0060 (36-130)||(29804-29898)
[»] scaffold0285 (1 HSPs)
scaffold0285 (60-156)||(13690-13786)
[»] scaffold0112 (1 HSPs)
scaffold0112 (54-109)||(41276-41331)


Alignment Details
Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 34 - 254
Target Start/End: Complemental strand, 28737933 - 28737713
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||      
T  28737933 ataggctcgtagaacatcaacataaatataaataacattgacgattaaaagagtgatgattagtcaattacatacacaatatatcccaaaaaaagcacaa 28737834  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaacttaagaaaacacaccccaacccacatgtaacaaaaatcaca 233  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28737833 taagtgctatactatatccaaaagaaacattattaatggtatattatatcgatccaaacttaagaaaacacaccccaacccacacgtaacaaaaatcaca 28737734  T
Q  234 caacaccaccatttaaacatt 254  Q
    |||||||| ||||||||||||    
T  28737733 caacaccagcatttaaacatt 28737713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 3892377 - 3892220
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| |||||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||| ||||||||||||     
T  3892377 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagcgatgattagtcaattacatacacaatatatcctaaaaagagcacca 3892278  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| || ||||||||||| |||||||||||| ||| || |||| ||||||||||||||    
T  3892277 taagtgttatactatatccaaaagaaacattgttagtgctatactatatcaatccaaa 3892220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 37372651 - 37372539
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  37372651 catcaacataaatataaataatattgacgattaagagaatgatgattagtcaattacatacacaatatatcccaaaaagagcaccataagtgctatacta 37372552  T
Q  148 tatcaaaaagaaa 160  Q
    |||| ||||||||    
T  37372551 tatccaaaagaaa 37372539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 27108878 - 27109035
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| |||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||      
T  27108878 ataggctcgtaacacatcaacataactataaataatattgacaattaagagagtgatgattagtcaattacatacataatatatcccaaaaagagcacaa 27108977  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| |||||||||||||| ||||| || ||| ||| || |||| |||||| |||||||    
T  27108978 taagtgctatactatatccaaaaggaaaattgttagtgttatactatatcgatccaaa 27109035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 20182802 - 20182653
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||     
T  20182802 ataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgatgattagtcaattacataaacaatatatcccaaaaagagcacca 20182703  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    | |||| ||||||||||| ||||| |||||| ||| || |||| ||||||    
T  20182702 ttaatgttatactatatccaaaaggaacattgttagtgttatactatatc 20182653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 27968513 - 27968378
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||| | | || |||||||    
T  27968513 catcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcacaaaaagagcaccatcagtgttatacta 27968414  T
Q  148 tatcaaaaagaaacattattaatggtatattatatc 183  Q
    |||| ||||| |||||| ||| || |||| ||||||    
T  27968413 tatccaaaaggaacattgttagtgttatactatatc 27968378  T

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Target: chr8; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 27886612 - 27886463
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| ||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||| |||||||||| ||     
T  27886612 ataggctcgtatcacatcaacataaatataaataatattgacgatcaagagagtgatgattagtcaattacatacacaatatatcacaaaaagagcccca 27886513  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    | | || ||||||||||| |||||||||||| ||| || |||| ||||||    
T  27886512 tcagtgttatactatatccaaaagaaacattgttagtgttatactatatc 27886463  T

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Target: chr8; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 27945270 - 27945121
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| ||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||| |||||||||| ||     
T  27945270 ataggctcgtatcacatcaacataaatataaataatattgacgatcaagagagtgatgattagtcaattacatacacaatatatcacaaaaagagcccca 27945171  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    | | || ||||||||||| |||||||||||| ||| || |||| ||||||    
T  27945170 tcagtgttatactatatccaaaagaaacattgttagtgttatactatatc 27945121  T

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Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 28025513 - 28025364
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| ||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||| |||||||||| ||     
T  28025513 ataggctcgtatcacatcaacataaatataaataatattgacgatcaagagagtgatgattagtcaattacatacacaatatatcacaaaaagagcccca 28025414  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    | | || ||||||||||| |||||||||||| ||| || |||| ||||||    
T  28025413 tcagtgttatactatatccaaaagaaacattgttagtgttatactatatc 28025364  T

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Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 7412037 - 7411880
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||| ||||||| | |||||||||||||||||||| ||| || ||||||||||||| |||| | ||||||||||||||| ||||||     
T  7412037 ataggctcgtagcacataaacataaatgtaaataatattgacgattaagagagtggtgattagtcaattgcataaacaatatatcccaaaaatagcacca 7411938  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    | ||||||||| |||||| |||| ||||||| ||| || |||| |||||| |||||||    
T  7411937 tcaatgctatattatatctaaaataaacattgttagtgttatactatatcgatccaaa 7411880  T

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Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 40412978 - 40412861
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| ||||||||||||||     
T  40412978 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcacca 40412879  T
Q  134 taaatgctatactatatc 151  Q
    |   ||||||||||||||    
T  40412878 tcggtgctatactatatc 40412861  T

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Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 5818036 - 5818193
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||   |||||||||| |||||||||||||| | ||||| | | |||||||||||||| |||||||| |||||||||| |||||||||||     
T  5818036 ataggctcgtagcatatcaacataaatataaataatattgtccattaagaaagtgatgattagtcaactacatacacaatatatccc-aaaagagcacca 5818134  T
Q  134 t-aaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    | ||||||||||||||||  ||||| |||||| ||| || |||| || |||||||||||    
T  5818135 tcaaatgctatactatattcaaaaggaacattgttagtgctatactacatcaatccaaa 5818193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 41098650 - 41098808
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||| | ||||||||||  |||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||      
T  41098650 ataggctcgtagcacatcaacattaatataaataattatgacgattaagagagtgatgattagtcaattacatacacaatatatctcaaaaagagcacaa 41098749  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaac 192  Q
    | | || ||||||||||| ||||   ||||| |||||| |||| |||||  ||||||||    
T  41098750 ttagtgttatactatatctaaaatgtacattgttaatgttatactatattgatccaaac 41098808  T

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Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 8170804 - 8170911
Alignment:
Q  49 atcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactat 148  Q
    |||||| ||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||||| | | |||||||| ||    
T  8170804 atcaacgtaaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcagtgctatacaat 8170903  T
Q  149 atcaaaaa 156  Q
    ||| ||||    
T  8170904 atccaaaa 8170911  T

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Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 191
Target Start/End: Complemental strand, 33014 - 32858
Alignment:
Q  38 gctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcc---caaaaagagcaccct 134  Q
    ||||||||  ||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||| | |||||||||    ||||| | || | |    
T  33014 gctcgtagcacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatatacaatatatccaaaaaaaaaaaacatcat 32915  T
Q  135 aaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    || || ||||||||||| |||||||||||| ||| || |||| |||||  |||||||    
T  32914 aagtgttatactatatccaaaagaaacattgttagtgttatactatattgatccaaa 32858  T

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Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 43770868 - 43770961
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||||||| || | |||||||||||||||||  ||||||| ||||||||||||||    
T  43770868 ctcgtagcacattaacataaatataaataatattgacgattaaaagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 43770961  T

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Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 28875726 - 28875820
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||    
T  28875726 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagca 28875820  T

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Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 32638391 - 32638484
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 145  Q
    ||||||| |||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| |||||||||||||| | | ||||||||    
T  32638391 aacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcaccatcagtgctatac 32638484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 32878011 - 32877918
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  32878011 ctcgtagcacattaacataaatataaataatattgacgattaatagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 32877918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 5540379 - 5540285
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| || | ||||||  |||||||||| ||||||| ||||||||||||    
T  5540379 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtgttcattagtttattacatacacaatatataccaaaaagagca 5540285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 145
Target Start/End: Original strand, 45216400 - 45216490
Alignment:
Q  55 ataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 145  Q
    |||| |||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| |||||||||||||| | | ||||||||    
T  45216400 ataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcaccatcattgctatac 45216490  T

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Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 19436806 - 19436717
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagag 128  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||    
T  19436806 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagag 19436717  T

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Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 19572955 - 19572866
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagag 128  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||    
T  19572955 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagag 19572866  T

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Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 25022708 - 25022615
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||   || |||| ||||||||||||||    
T  25022708 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatatgcaaaatataccaaaaagagcacc 25022615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 131
Target Start/End: Complemental strand, 6029033 - 6028954
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcac 131  Q
    ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| | |||||||||||    
T  6029033 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatatacaaaaaagagcac 6028954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 42949623 - 42949532
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    |||||||  ||| ||||||| |||| ||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||    
T  42949623 ctcgtagcacattaacataaatatacataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagca 42949532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 19947552 - 19947632
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||| |||||||||||||||||||||| | | || |||||||||||||||||||  || | || ||||||||||||||    
T  19947552 aacataaatataaataatattgacgattaacacagtggtgattagtcaattacatacgcaaaacataccaaaaagagcacc 19947632  T

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Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 4246857 - 4246790
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||||    
T  4246857 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 4246790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 159
Target Start/End: Complemental strand, 32425316 - 32425226
Alignment:
Q  70 attgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactata-tcaaaaagaa 159  Q
    |||||||||||| ||| |||| ||||| |||||||||||| |||||||||| |||| |||| | | |||| ||||||||| ||||||||||    
T  32425316 attgacgattaagagagtgattattagccaattacatacacaatatatccccaaaatagcatcatcaatgttatactatattcaaaaagaa 32425226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 12579706 - 12579762
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatac 108  Q
    ||||||| |||||||||||||||||||||| ||| || | |||||||||||||||||    
T  12579706 aacataaatataaataatattgacgattaagagagtgttcattagtcaattacatac 12579762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 32760308 - 32760217
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcac 131  Q
    |||||||  ||| ||||||| |||||||||||||||||||| | ||| || | |||||||||||||||||  |||||||  ||||||||||||    
T  32760308 ctcgtagcacattaacataaatataaataatattgacgattgagagagtggtcattagtcaattacatacgaaatatat-acaaaaagagcac 32760217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 131
Target Start/End: Complemental strand, 37669509 - 37669431
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcac 131  Q
    ||||||| |||||||||||||||||||| | ||| || | |||||||||||||||||  |||||||  ||||||||||||    
T  37669509 aacataaatataaataatattgacgattgagagagtggtcattagtcaattacatacgaaatatat-acaaaaagagcac 37669431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 36484377 - 36484299
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatat 117  Q
    |||||||  ||| ||||||| |||||||||||||||||||| | ||| || | |||||||||||||||||  |||||||    
T  36484377 ctcgtagcacattaacataaatataaataatattgacgattgagagagtggtcattagtcaattacatacgaaatatat 36484299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 38389051 - 38389011
Alignment:
Q  83 agaatgatgattagtcaattacatacataatatatcccaaa 123  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  38389051 agaatgatgattagtcaattacatacacaatatataccaaa 38389011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 34900556 - 34900615
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaa 124  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||    
T  34900556 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaa 34900615  T

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Target: chr1 (Bit Score: 102; Significance: 9e-51; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 10822807 - 10822650
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||     
T  10822807 ataggctcgtagtacatgaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccg 10822708  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| |||||||||||||| |||||||||||| ||| || ||||||||||| |||||||    
T  10822707 taagtgctatactatatccaaaagaaacattgttagtgatatattatatcgatccaaa 10822650  T

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Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 34 - 190
Target Start/End: Complemental strand, 14167482 - 14167326
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||||||||||||     
T  14167482 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaaaaagagcacca 14167383  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaa 190  Q
    |||  ||||||||||||| |||||| ||||| ||| || |||| |||||| ||||||    
T  14167382 taagagctatactatatccaaaagatacattgttagtgttatactatatcgatccaa 14167326  T

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Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 191
Target Start/End: Complemental strand, 24851902 - 24851748
Alignment:
Q  37 ggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaa 136  Q
    |||||||||  ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| |      
T  24851902 ggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccattt 24851803  T
Q  137 atgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
     |||||||||||||| ||||  |||||| ||| || |||| |||||| |||||||    
T  24851802 gtgctatactatatccaaaacgaacattgttagtgctatactatatcgatccaaa 24851748  T

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Target: chr1; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 38 - 191
Target Start/End: Original strand, 9528553 - 9528706
Alignment:
Q  38 gctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaa 137  Q
    ||||||||  ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||  || | |||     
T  9528553 gctcgtagtacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaaggacatcataag 9528652  T
Q  138 tgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    |||||||||||||| |||||||||||  ||| || |||| |||||| |||||||    
T  9528653 tgctatactatatccaaaagaaacatcgttagtgctatactatatcgatccaaa 9528706  T

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Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 34 - 182
Target Start/End: Original strand, 32380763 - 32380911
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||     
T  32380763 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcgattacatacataatatatcccaaaaagagcacca 32380862  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatat 182  Q
    | | || ||||||||||  ||||| |||||| ||| || |||| |||||    
T  32380863 ttagtgttatactatattcaaaaggaacattgttagtgttatactatat 32380911  T

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Target: chr1; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 29168360 - 29168230
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||||||||| |||||||||| |     
T  29168360 ataggctcgtagcacatcaacataaatataaataatatcgacgattaagagagtgatgattagtcaattacatacacaatatatccaaaaaagagcatca 29168261  T
Q  134 taaatgctatactatatcaaaaagaaacatt 164  Q
    ||| || ||||||||||| ||||||||||||    
T  29168260 taagtgatatactatatccaaaagaaacatt 29168230  T

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Target: chr1; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 34 - 168
Target Start/End: Complemental strand, 32797604 - 32797470
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||   |||||||||| ||||| |||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||     
T  32797604 ataggctcgtagcatatcaacataaatataagtaatattgacgattaagagagtgatgattagtcaattacatatataatatatcccaaaaagagcacca 32797505  T
Q  134 taaatgctatactatatcaaaaagaaacattatta 168  Q
    | |||| ||||||||||| ||||  ||||||||||    
T  32797504 tcaatgatatactatatccaaaatgaacattatta 32797470  T

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Target: chr1; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 34432120 - 34432277
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||| |||  ||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| |||||||| |||||||| ||||     
T  34432120 ataggctcttagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatatctcaaaaagaacacca 34432219  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| | ||||||||||||  ||||||||||| ||| || |||| |||||| |||||||    
T  34432220 taagtactatactatatcccaaagaaacattgttagtgttatactatatcgatccaaa 34432277  T

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Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 9782057 - 9781898
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatccca--aaaagagcac 131  Q
    ||||||||||||  ||||||||||| ||||||||||||||| |||||| ||| ||| |||||||||||||| |||| |||||||||||  |||| |||||    
T  9782057 ataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgacgattagtcaattacgtacacaatatatcccaaaaaaaaagcac 9781958  T
Q  132 cctaaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    | ||| |||||||||||||| |||||||||||| ||| || |||| | |||| |||||||    
T  9781957 cataagtgctatactatatccaaaagaaacattgttagtgctatactgtatcgatccaaa 9781898  T

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Target: chr1; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 37922613 - 37922478
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| |||||||||||||| ||||||| ||| | || || | ||||||||||||| |||||||||||||||||||||| | ||||||||||||    
T  37922613 catcaacataaatataaataatattggcgattaagagagttataatcaatcaattacatacacaatatatcccaaaaagagcaccatcaatgctatacta 37922514  T
Q  148 tatcaaaaagaaacattattaatggtatattatatc 183  Q
    |||| |||||||||||| ||| || |||| ||||||    
T  37922513 tatccaaaagaaacattgttagtgctatactatatc 37922478  T

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Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 29862213 - 29862053
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagag---ca 130  Q
    |||||||||||   ||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||||| |    ||    
T  29862213 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaaaaaaaaaaaca 29862114  T
Q  131 ccctaaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    |  ||| || ||||||||||| |||||||||||| ||| ||||||| | ||||||||||||    
T  29862113 ctataagtgatatactatatccaaaagaaacattgttagtggtatactttatcaatccaaa 29862053  T

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Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 3707995 - 3708098
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||| |||   | ||||||||||    
T  3707995 catcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagaggaccaccagtgctatacta 3708094  T
Q  148 tatc 151  Q
    ||||    
T  3708095 tatc 3708098  T

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Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 36551818 - 36551722
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| ||||  |||| |||||||||||| ||||||||||||||||||||    
T  36551818 ataggctcgtaggacatcaacataaatataaataatattgacgattaagagagtgattgttagccaattacatacacaatatatcccaaaaagagca 36551722  T

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Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 34096257 - 34096407
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatccc-aaaaagagcacc 132  Q
    ||||||||||||  ||||||||||| ||||||||||||||| |||||| ||| ||| ||| | ||||||||||||| ||||| |||| ||||| | || |    
T  34096257 ataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgacgatcaatcaattacatacacaatatgtcccaaaaaaaaacatc 34096356  T
Q  133 ctaaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
     ||| |||||||||||||| |||||||||||| ||| || |||| ||||||    
T  34096357 gtaagtgctatactatatctaaaagaaacattgttagtgctatactatatc 34096407  T

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Target: chr1; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 28948368 - 28948464
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| || | |||||||||||||||||| ||||||| ||||||||||||||    
T  28948368 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacacaatatataccaaaaagagcacc 28948464  T

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Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 191
Target Start/End: Original strand, 13012560 - 13012716
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacccta--- 135  Q
    |||||||  ||| ||||||| |||||||||||||||| ||||| ||| || |||||||||||||||||||  || |||| |||||||||||||| ||       
T  13012560 ctcgtagcacattaacataaatataaataatattgacaattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcaccatacat 13012659  T
Q  136 -aatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
     |||| ||||||||||| ||||| ||||||  || || ||||||||||| |||||||    
T  13012660 caatgttatactatatctaaaaggaacattgctagtgctatattatatcgatccaaa 13012716  T

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Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 3427800 - 3427707
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||||||| || | |||||||||||||||||  ||||||| ||||||||||||||    
T  3427800 ctcgtagcacattaacataaatataaataatattgacgattaaaagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 3427707  T

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Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 14334712 - 14334619
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||| ||| |||| ||||||||||||||    
T  14334712 ctcgtagtacattaacataaatataaataatattgacgattaagagagtgttgattagtcaattacatacgtaaaatataccaaaaagagcacc 14334619  T

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Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 24589807 - 24589901
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagc 129  Q
    |||||||||||   ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||| |||| ||||||||  |||||||||    
T  24589807 ataggctcgtatcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattac-tacacaatatatcttaaaaagagc 24589901  T

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Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 31652979 - 31653072
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  31652979 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 31653072  T

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Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 47655050 - 47654942
Alignment:
Q  83 agaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacattattaatggtatattatat 182  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||| | | | ||||||| |||||| ||||  |||||| ||| || |||| |||||    
T  47655050 agaatgatgattagtcaattacatacacaatatataccaaaaagagcatcatcagtgctatattatatccaaaatgaacattgttagtgttatactatat 47654951  T
Q  183 caatccaaa 191  Q
    | |||||||    
T  47654950 cgatccaaa 47654942  T

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Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 37346520 - 37346611
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| || |||  ||||||||||||||    
T  37346520 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaaaata--ccaaaaagagcacc 37346611  T

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Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 15417772 - 15417699
Alignment:
Q  91 gattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacatt 164  Q
    ||||||||||||||||| | |||||||||||||||||| ||| | |||| ||||||||||||||||| ||||||    
T  15417772 gattagtcaattacatatacaatatatcccaaaaagaggaccatcaatgttatactatatcaaaaaggaacatt 15417699  T

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Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 28658561 - 28658658
Alignment:
Q  35 taggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||||||  ||| ||||||| |||||||||||||||||||||| ||| || | ||||||||||||||||   ||||||| ||||||||| ||||    
T  28658561 taggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacatatgcaatatataccaaaaagaacacc 28658658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 43190200 - 43190108
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcac 131  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||  || |||| | |||||||||||    
T  43190200 ctcgtagcacattaacataaatataaataatattgacgattaagagagtgatgattagtcaaatacatacgcaaaatatacaaaaaagagcac 43190108  T

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Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 5985132 - 5985037
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| || | |||||| ||||||||||  |||||||  |||||||||||||    
T  5985132 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtaaattacatacgcaatatat-acaaaaagagcacc 5985037  T

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Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 25257560 - 25257454
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacccta 135  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| ||  | ||||||||||||||||  |||||||  ||||||||||||| |     
T  25257560 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtg--gtttagtcaattacatacgcaatatat-acaaaaagagcaccatc 25257464  T
Q  136 aatgctatac 145  Q
    | ||||||||    
T  25257463 agtgctatac 25257454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 33040777 - 33040711
Alignment:
Q  49 atcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatata 116  Q
    |||||||||| |||||||||||||||||||||| ||| |||| |||| |||| |||||||| ||||||    
T  33040777 atcaacataaatataaataatattgacgattaagagagtgattattattcaa-tacatacacaatata 33040711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 10764009 - 10763917
Alignment:
Q  93 ttagtcaattacatacataatatatccc--aaaaagagcaccctaaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    ||||||||||||||||| ||||||| ||  ||||| |||||| ||| || ||| ||||||| |||||||||||| ||| || |||| ||||||    
T  10764009 ttagtcaattacatacacaatatattccaaaaaaaaagcaccataagtgatattctatatccaaaagaaacatttttagtgctatactatatc 10763917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 2472682 - 2472734
Alignment:
Q  98 caattacatacataatatatcccaaaaagagcaccctaaatgctatactatat 150  Q
    |||||||||||| ||||||||| |||||||||||| | | |||||||||||||    
T  2472682 caattacatacacaatatatcctaaaaagagcaccatcagtgctatactatat 2472734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 38218777 - 38218733
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgat 78  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||    
T  38218777 ataggctcgtagtacatcaacataaatataaataatattgacgat 38218733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 6916049 - 6916108
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaa 124  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||    
T  6916049 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaa 6916108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 8133100 - 8133033
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||||||||| ||| || | ||||| ||||||||||   ||||||| ||||||||||||||    
T  8133100 ataatattgacgattaagagagtggtcattagccaattacatatgcaatatataccaaaaagagcacc 8133033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 14334604 - 14334549
Alignment:
Q  136 aatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    |||||||||||||||| |||||||||||| ||| || |||| |||||| |||||||    
T  14334604 aatgctatactatatccaaaagaaacattgttagtgctatactatatcgatccaaa 14334549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 15417967 - 15417920
Alignment:
Q  49 atcaacataagtataaataatattgacgattaaaagaatgatgattag 96  Q
    |||||||||| |||||||||||||||||||||| ||| ||| ||||||    
T  15417967 atcaacataaatataaataatattgacgattaagagagtgaagattag 15417920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 38331370 - 38331311
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaa 124  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||    
T  38331370 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaa 38331311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 41675743 - 41675822
Alignment:
Q  104 catacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    |||||| |||||||  ||||||||||| | | |||| ||||||||||| ||||| |||||| |||||| |||| ||||||    
T  41675743 catacacaatatatttcaaaaagagcatcatcaatgttatactatatctaaaagcaacattgttaatgttatactatatc 41675822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 52894888 - 52894947
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaa 124  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||    
T  52894888 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaa 52894947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 37346626 - 37346678
Alignment:
Q  136 aatgctatactatatcaaaaa-gaaacattattaatggtatattatatcaatc 187  Q
    ||||||||||||||||||||| | |||||| |||||| |||| ||||||||||    
T  37346626 aatgctatactatatcaaaaagggaacattgttaatgctatactatatcaatc 37346678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 6e-46; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 47607514 - 47607357
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| | | |||| |||||||||||||||||| ||||||||||||||||||||||     
T  47607514 ataggctcgtagcacatcaacataaatataaataatattgacgattaagatagtgataattagtcaattacatacacaatatatcccaaaaagagcacca 47607415  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| |||||||||||||| |||||||||||| ||  || ||||||||||| |||||||    
T  47607414 taagtgctatactatatccaaaagaaacattgttggtgctatattatatcgatccaaa 47607357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 1177391 - 1177233
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatccca-aaaagagcacc 132  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||| |||| || |||    
T  1177391 ataggctcgtagaacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaaaaaaaagtacc 1177292  T
Q  133 ctaaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
     ||| |||||||||||||| |||||||||||| ||| || |||| ||||||||||||||    
T  1177291 ataagtgctatactatatccaaaagaaacattgttagtgctatactatatcaatccaaa 1177233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 31945932 - 31946062
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||     
T  31945932 ataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcacca 31946031  T
Q  134 taaatgctatactatatcaaaaagaaacatt 164  Q
    ||| |||||||||||||| ||||| ||||||    
T  31946032 taagtgctatactatatctaaaaggaacatt 31946062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 40694483 - 40694353
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||| ||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| |     
T  40694483 ataggctcgtagcacatcaacataaatataaataatatcgacaattaagagagtgatgattagtcaattacatacgtaatatatcccaaaaagagcatca 40694384  T
Q  134 taaatgctatactatatcaaaaagaaacatt 164  Q
    ||| || |||| |||||| ||||||||||||    
T  40694383 taagtgatatattatatccaaaagaaacatt 40694353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 3108988 - 3109137
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||   |||||||||| |||||||||||||||||||||||||| |||| ||||| |||||||||||| ||||||||||||||||||||||     
T  3108988 ataggctcgtagcaaatcaacataaatataaataatattgacgattaaaagagtgattattagccaattacatacacaatatatcccaaaaagagcacca 3109087  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    |   || ||||||||||| ||||| |||||| ||| || |||| ||||||    
T  3109088 tctgtgttatactatatccaaaaggaacattgttagtgttatactatatc 3109137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 48 - 191
Target Start/End: Original strand, 44521743 - 44521886
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    |||| |||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||| || ||||| |||||| |||||| | | ||||||||||    
T  44521743 catctacataaatataaataacattgacgattaagagagtgatgattagtcaattacatacacaaaatatctcaaaaaaagcaccattagtgctatacta 44521842  T
Q  148 tatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    |||| ||||| |||||| |||||| |||| |||||| |||||||    
T  44521843 tatccaaaaggaacattgttaatgttatactatatcgatccaaa 44521886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 48 - 191
Target Start/End: Complemental strand, 51859194 - 51859051
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| ||||||||||||||||||||||  |  |||||||||||||||||| | || |||||||| ||||||||||| | ||| ||||||||||    
T  51859194 catcaacataaatataaataatattgacgattaagtgggtgatgattagtcaattactttcacaatatatcacaaaaagagcatcataagtgctatacta 51859095  T
Q  148 tatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    |||| |||||||||||| ||| || |||| |||||| |||||||    
T  51859094 tatccaaaagaaacattgttagtgttatactatatcgatccaaa 51859051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 52721789 - 52721663
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| |     
T  52721789 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatca 52721690  T
Q  134 taaatgctatactata-tcaaaaagaa 159  Q
    | |||| ||||||||| ||||||||||    
T  52721689 tcaatgatatactatattcaaaaagaa 52721663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 187
Target Start/End: Complemental strand, 24784807 - 24784654
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| |     
T  24784807 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatca 24784708  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatc 187  Q
    |   |||||||||||||| ||||  ||||||  || || |||| ||||||||||    
T  24784707 tcggtgctatactatatccaaaaagaacattgatagtgctatactatatcaatc 24784654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 187
Target Start/End: Original strand, 24823459 - 24823612
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| |     
T  24823459 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatca 24823558  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatc 187  Q
    |   |||||||||||||| ||||  ||||||  || || |||| ||||||||||    
T  24823559 tcggtgctatactatatccaaaaagaacattgatagtgctatactatatcaatc 24823612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 164
Target Start/End: Original strand, 30683380 - 30683495
Alignment:
Q  49 atcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactat 148  Q
    |||||||||| |||||||||||| ||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||||||||| | |||| ||||||||    
T  30683380 atcaacataaatataaataatatcgacgattaagagagtgatgattaatcaattacatatataatatatcccaaaaagagcaccatcaatgttatactat 30683479  T
Q  149 atcaaaaagaaacatt 164  Q
    ||  ||||| ||||||    
T  30683480 attcaaaaggaacatt 30683495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 36511635 - 36511795
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatc---ccaaaaagagca 130  Q
    ||||||||||||  |||||| | || |||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||     ||||| | ||    
T  36511635 ataggctcgtagcacatcaatacaaatataaataatattgacgattaagagagtgacgattagtcaattacatacaaaatatatcaaaaaaaaaaaaaca 36511734  T
Q  131 ccctaaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    || ||| |||||||||||||| |||||||||||| ||| || ||||||||||| |||||||    
T  36511735 ccataagtgctatactatatccaaaagaaacattcttagtgctatattatatcgatccaaa 36511795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 55900831 - 55900988
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| ||||||| ||| | |||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||| |     
T  55900831 ataggctcgtagcacatcaacataaatataaattatactcacgattacgagaatgatgattagtcaattacatacacaatatataccaaaaagagcatca 55900930  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    | | ||||||| |||||| ||||  |||||| ||| || |||| |||||| |||||||    
T  55900931 tcagtgctatattatatccaaaatgaacattgttagtgttatactatatcgatccaaa 55900988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 183
Target Start/End: Original strand, 24793415 - 24793563
Alignment:
Q  35 taggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccct 134  Q
    |||||||| ||  ||||||||||| |||||||||||||||||||||| ||| |||| ||||| |||||| ||||| |||||||||||||||||||| | |    
T  24793415 taggctcgcagcacatcaacataaatataaataatattgacgattaagagagtgattattagccaattagatacacaatatatcccaaaaagagcatcat 24793514  T
Q  135 aaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
     | || ||||||||||| ||||| |||||| ||| || |||| ||||||    
T  24793515 cagtgttatactatatccaaaaggaacattgttagtgttatactatatc 24793563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 49 - 164
Target Start/End: Original strand, 7952831 - 7952946
Alignment:
Q  49 atcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactat 148  Q
    |||||||||| ||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||||  | | |||| ||||||||    
T  7952831 atcaacataaatataagtaatattgacgattaaaagagtgatgattaatcaattacatatataatatatcccaaaaggagcgtcatcaatgttatactat 7952930  T
Q  149 atcaaaaagaaacatt 164  Q
    ||| ||||| ||||||    
T  7952931 atccaaaaggaacatt 7952946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 42630175 - 42630291
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||| ||||| |||| | | | || ||||||     
T  42630175 catcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatccaaaaaaaagcatcatcagtgttatactc 42630274  T
Q  148 tatcaaaaagaaacatt 164  Q
    |||| ||||| ||||||    
T  42630275 tatccaaaaggaacatt 42630291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 17892669 - 17892530
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| |||||||||||||||||||||| ||| |||| ||||| |||||||||||| ||||||  |||||||||||| | | | || |||||||    
T  17892669 catcaacataaatataaataatattgacgattaagagagtgattattagacaattacatacacaatataaaccaaaaagagcatcatcagtgttatacta 17892570  T
Q  148 tatcaaaaagaaacattattaatggtatattatatcaatc 187  Q
    |||  ||||| |||||| ||| || |||| ||||||||||    
T  17892569 tattcaaaaggaacattgttagtgttatactatatcaatc 17892530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 49470692 - 49470581
Alignment:
Q  53 acataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatca 152  Q
    |||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||| | |||||||| ||| | | ||||||||||||||||     
T  49470692 acataaatataaataatattgacgattaagagagtgatgattaatcaattacatacacaatattttccaaaaagtgcatcatcaatgctatactatatcc 49470593  T
Q  153 aaaagaaacatt 164  Q
    ||||| ||||||    
T  49470592 aaaaggaacatt 49470581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 36944083 - 36943974
Alignment:
Q  55 ataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaa 154  Q
    |||| |||||||||||||||||||||| ||| |||| ||||| |||||||||||| |||||||||||||||||||| | | | || ||||||||||| ||    
T  36944083 ataaatataaataatattgacgattaagagattgattattagccaattacatacacaatatatcccaaaaagagcatcatcagtgttatactatatccaa 36943984  T
Q  155 aagaaacatt 164  Q
    ||| ||||||    
T  36943983 aaggaacatt 36943974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 39958123 - 39957974
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   |||| |||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| |     
T  39958123 ataggctcgtaacacatcgacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatca 39958024  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    |   || ||||||||||| ||||  |||||| ||| || |||| ||||||    
T  39958023 tcggtgttatactatatctaaaaagaacattgttagtgctatactatatc 39957974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 191
Target Start/End: Complemental strand, 51675197 - 51675045
Alignment:
Q  38 gctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaa 137  Q
    ||||||||  ||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||| | ||||||| |||||||||| | | |||     
T  51675197 gctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattaatcaattacatatacaatatat-ccaaaaagagaatcataag 51675099  T
Q  138 tgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    || |||||||||| | |||| || ||| ||| || |||| |||||| |||||||    
T  51675098 tgttatactatattagaaaggaatattgttagtgatatactatatctatccaaa 51675045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 258789 - 258896
Alignment:
Q  49 atcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactat 148  Q
    |||||| ||| ||||||||||| |||||||||| ||| |||| |||||||||||||||||| |||||||| ||||||||| ||| ||| || ||||||||    
T  258789 atcaacttaaatataaataatagtgacgattaagagagtgataattagtcaattacatacacaatatatctcaaaaagagtaccataagtgttatactat 258888  T
Q  149 atcaaaaa 156  Q
    ||| ||||    
T  258889 atccaaaa 258896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 145
Target Start/End: Original strand, 5325197 - 5325287
Alignment:
Q  55 ataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 145  Q
    |||| |||||||||||||||||||||| ||| |||| |||||||||||||||||  ||||||| |||||||||||||| ||| ||||||||    
T  5325197 ataaatataaataatattgacgattaagagagtgatcattagtcaattacatacgcaatatataccaaaaagagcaccataagtgctatac 5325287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 182
Target Start/End: Complemental strand, 14614910 - 14614769
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||||       |||||||||||||||||| | | ||||||||||||||| || |     
T  14614910 ataggctcgtagcacatcaacataaatataaataatattgacgattaaa-------tgattagtcaattacatatacagtatatcccaaaaagaacatca 14614818  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatat 182  Q
    |||||| |||  |||||| |||||||| ||| ||| || ||||||||||    
T  14614817 taaatgttatgttatatccaaaagaaatattgttagtgctatattatat 14614769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 2586750 - 2586602
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||| ||  ||||||||||| |||||||||||||||||||||| ||| |||| ||||| |||||||||||| |||||| ||  ||||||||| |     
T  2586750 ataggctcgcagcacatcaacataaatataaataatattgacgattaagagagtgattattagccaattacatacacaatata-cctcaaaagagcatca 2586652  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    | | || |||| |||||| ||||| |||||| |||||| |||| ||||||    
T  2586651 tcagtgttatattatatccaaaaggaacattgttaatgttatactatatc 2586602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 43509600 - 43509693
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  43509600 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 43509693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 52573141 - 52573035
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaat 138  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || | |||||||||||||||||  | ||||| |||||||||||||| | | |    
T  52573141 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcagtatataccaaaaagagcaccatcagt 52573042  T
Q  139 gctatac 145  Q
    |||||||    
T  52573041 gctatac 52573035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 14795966 - 14795857
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacccta 135  Q
    ||||||||||  ||| || |||| |||||||||||||||||||||| ||| || | |||||||||||||||||  |||||||  ||||||||||||| |     
T  14795966 aggctcgtagcacattaatataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatatatcaaaaagagcaccatc 14795867  T
Q  136 aatgctatac 145  Q
    | ||||||||    
T  14795866 agtgctatac 14795857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 5835371 - 5835291
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||  || ||||  |||||||||||||    
T  5835371 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatatatcaaaaagagcacc 5835291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 37992295 - 37992369
Alignment:
Q  90 tgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacatt 164  Q
    ||||||||| |||||||||  |||||||||||||||||||||| | | ||||||| |||||| ||||| ||||||    
T  37992295 tgattagtcgattacatacccaatatatcccaaaaagagcaccattagtgctatattatatccaaaaggaacatt 37992369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 41146559 - 41146454
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaat 138  Q
    |||||||  ||| ||||||| |||||||||||||||| ||||| ||| || | |||||||||||||||||  |||||||  ||||||||||||| | | |    
T  41146559 ctcgtagcacataaacataaatataaataatattgacaattaagagagtggtcattagtcaattacatacgcaatatat-acaaaaagagcaccatcagt 41146461  T
Q  139 gctatac 145  Q
    |||||||    
T  41146460 gctatac 41146454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 28377440 - 28377360
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||| |||||||||||||| | ||||| ||| || |||||||||||||||||||  || ||||  |||||||||||||    
T  28377440 aacataaatataaataatattggcaattaagagagtggtgattagtcaattacatacgcaaaatataacaaaaagagcacc 28377360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 3402762 - 3402828
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcac 131  Q
    |||||||||| |||||| ||| || | |||||||||||||||||  ||||||| |||||||||||||    
T  3402762 ataatattgatgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcac 3402828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 8063282 - 8063341
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaa 124  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||    
T  8063282 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaa 8063341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 53323242 - 53323204
Alignment:
Q  92 attagtcaattacatacataatatatcccaaaaagagca 130  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  53323242 attagtcaattacatacacaatatataccaaaaagagca 53323204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 31227270 - 31227205
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    ||||||||||||||||| ||| || | ||||||||||||||| |  |||| || ||||||||||||    
T  31227270 ataatattgacgattaagagagtggtcattagtcaattacatgcgcaatacataccaaaaagagca 31227205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 22492932 - 22492968
Alignment:
Q  92 attagtcaattacatacataatatatcccaaaaagag 128  Q
    |||||||||||||||| || |||||||||||||||||    
T  22492932 attagtcaattacatatatgatatatcccaaaaagag 22492968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 6e-46; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 4355725 - 4355568
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||| ||||||  ||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||     
T  4355725 ataggttcgtagcacatcaacataaatataaataatattgacgactaagagagtgatgattagtcaattacatacataatatatcccaaaaagagcccca 4355626  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| |||||||||||||| |||||||||||| ||| || |||| |||||| |||||||    
T  4355625 taagtgctatactatatccaaaagaaacattgttagtgttatactatatcgatccaaa 4355568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 1005925 - 1005768
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||||||| ||||||||||||     
T  1005925 ataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcctaaaaagagcacca 1005826  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| |||||||||||||| ||||| || ||| ||| || |||| |||||| |||||||    
T  1005825 taagtgctatactatatccaaaaggaatattgttagtgttatactatatcgatccaaa 1005768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 4562202 - 4562045
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||| ||||  ||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||| |||     
T  4562202 ataggcttgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagtacca 4562103  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| | |||||||||||| ||||| |||||| ||| || |||| ||||||||||||||    
T  4562102 taagtactatactatatccaaaaggaacattgttagtgatatactatatcaatccaaa 4562045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 14824552 - 14824395
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||     
T  14824552 ataggctcgtaacacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcacca 14824453  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| |||||||||||||| ||||  |||||| ||| || |||| |||||| |||||||    
T  14824452 taagtgctatactatatccaaaaagaacattgttagtgctatactatatcgatccaaa 14824395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 191
Target Start/End: Complemental strand, 24585945 - 24585791
Alignment:
Q  38 gctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaa 137  Q
    ||||||||  ||| ||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||| ||| |||     
T  24585945 gctcgtagcacataaacataaatataaataatattgacgattaagagagtgaagattagtcaattacatacagaatatatcccaaaaagagtaccataag 24585846  T
Q  138 tgctatactatat-caaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||||||||||||| |||||||||||||| ||| || |||| |||||| |||||||    
T  24585845 tgctatactatatccaaaaagaaacattgttagtgctatactatatcgatccaaa 24585791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 31235869 - 31236018
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| |     
T  31235869 ataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcatca 31235968  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    | |||| ||||||||||| ||||| |||||| ||| || |||| ||||||    
T  31235969 tcaatgatatactatatccaaaaggaacattgttagtgttatactatatc 31236018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 44157010 - 44156854
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||||||     
T  44157010 ataggctcgtagcacatcaacataaatataaataatattgacgattaaaagagtgatgattagtcaattacatacacaacata-cccaaaaagagcacca 44156912  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
     || || ||||||||||| | |||||||||| ||| |  ||||||||||| |||||||    
T  44156911 caagtgttatactatatccagaagaaacattgttagttctatattatatcgatccaaa 44156854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 191
Target Start/End: Complemental strand, 5588437 - 5588294
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||| || |||||||| ||| || ||||||     
T  5588437 catcaacataaatataaataatattgatgattaagagaatgatgattagtcaattacatacacaatatatcccgaagagagcaccataagtgatatactg 5588338  T
Q  148 tatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    |||  |||||||||||| ||| || ||||||||||| |||||||    
T  5588337 tatgcaaaagaaacattgttagtgttatattatatcgatccaaa 5588294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 187
Target Start/End: Complemental strand, 34146600 - 34146462
Alignment:
Q  49 atcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactat 148  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||| | | |||| ||||||||    
T  34146600 atcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacctacacaatatatcccaaaaagagcatcatcaatgttatactat 34146501  T
Q  149 atcaaaaagaaacattattaatggtatattatatcaatc 187  Q
    ||| ||||| |||| | ||| || |||| ||||||||||    
T  34146500 atccaaaaggaacactgttagtgctatactatatcaatc 34146462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 40536630 - 40536500
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||| |  |||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||| ||||||||||||||     
T  40536630 ataggctcgtaaaatatcaacataaatataagtaatattgacgattaaaagagtgatgattagtcaattacatatacaatatattccaaaaagagcacca 40536531  T
Q  134 taaatgctatactatatcaaaaagaaacatt 164  Q
    | |||| ||||||||||| ||||| ||||||    
T  40536530 tcaatgttatactatatccaaaaggaacatt 40536500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 34 - 181
Target Start/End: Complemental strand, 3564252 - 3564106
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| ||||| |||||||||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||| |     
T  3564252 ataggctcgtaacacatcaacataaatataa-taatattgacgattaagagagtgatgattagtcaattgcatacacaatatatcccaaaaagagcatca 3564154  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattata 181  Q
    ||| || ||||||||||| ||||||| |||| |||||| |||| ||||    
T  3564153 taactgttatactatatccaaaagaagcattgttaatgctatactata 3564106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 28746365 - 28746523
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcc-caaaaagagcacc 132  Q
    |||||||||||   ||||| ||||| ||||||||||||||| |||||| ||| ||| ||||||||||||||||||| |||||||||  ||||| ||||||    
T  28746365 ataggctcgtatcacatcagcataaatataaataatattgatgattaagagagtgacgattagtcaattacatacacaatatatccaaaaaaaaagcacc 28746464  T
Q  133 ctaaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
     ||| |||||||||||||| |||||||||||| ||| || |||| |||||| |||||||    
T  28746465 ataagtgctatactatatccaaaagaaacattgttattgttatactatatcgatccaaa 28746523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 3545264 - 3545413
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| |||| |||| ||||||||||||| ||||||||| |||| ||||| |     
T  3545264 ataggctcgtagtacatcaacataaatataaataatattgacgattaagagagtgataattaatcaattacatacacaatatatcctaaaaggagcatca 3545363  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    | | || ||||||||||| |||||||| ||||||| || |||| ||||||    
T  3545364 tcagtggtatactatatccaaaagaaatattattagtgctatactatatc 3545413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 45158859 - 45159008
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||| |||||||  ||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| ||||||||||||||     
T  45158859 atagactcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcacca 45158958  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    |   |||||||||||||| ||||  |||||| ||| || |||| ||||||    
T  45158959 tcggtgctatactatatccaaaaagaacatttttagtgctatactatatc 45159008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 166
Target Start/End: Complemental strand, 35996944 - 35996812
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||| |||||||  ||||||||||| |||||||||||||||||||||| ||| ||||||||| |||||||||| || |||||||||||||| |||||||     
T  35996944 atagactcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattaatcaattacatgcacaatatatcccaaaaggagcacca 35996845  T
Q  134 taaatgctatactatatcaaaaagaaacattat 166  Q
    ||| || ||||||||||| ||||  ||||||||    
T  35996844 taagtgttatactatatccaaaatgaacattat 35996812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 191
Target Start/End: Complemental strand, 2319707 - 2319553
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacccta 135  Q
    ||||||||||  |||| |||| | ||||||||||||||||||||||||||||||||||||||||||||  || | |||||||||||||||||||| | |     
T  2319707 aggctcgtagcacatccacattaatataaataatattgacgattaaaagaatgatgattagtcaattaattagaaaatatatcccaaaaagagca-catc 2319609  T
Q  136 aatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    |  | ||||||||||| ||||| |||||| ||| || |||| ||||||||||||||    
T  2319608 atggatatactatatccaaaaggaacattgttagtgttatactatatcaatccaaa 2319553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 12206400 - 12206270
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||| ||||  ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||||||| ||||| ||||||     
T  12206400 ataggcttgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaaatacatacaaaatatatccgaaaaaaagcacca 12206301  T
Q  134 taaatgctatactatatcaaaaagaaacatt 164  Q
    | |||| |||| |||||| ||||| ||||||    
T  12206300 tcaatgttatattatatccaaaaggaacatt 12206270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 191
Target Start/End: Original strand, 8482648 - 8482779
Alignment:
Q  60 tataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaa 159  Q
    |||| ||||||||| ||||||| ||| |||| ||| |||||||||| ||| |||||||||||||| ||||||| |   |||||||||||||| ||||| |    
T  8482648 tatagataatattgtcgattaagagagtgattattggtcaattacaaacacaatatatcccaaaacgagcaccatcggtgctatactatatccaaaagga 8482747  T
Q  160 acattattaatggtatattatatcaatccaaa 191  Q
    ||||| |||||| ||||||||||| |||||||    
T  8482748 acattgttaatgttatattatatcgatccaaa 8482779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 10573918 - 10573800
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataa-tattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||||  ||||||||||| ||||||||| |||||||||||||  || ||||||||||||||||||||| | |||||||| |||||||||||||    
T  10573918 ataggctcgtagcacatcaacataaatataaataaatattgacgattaagtgagtgatgattagtcaattacatatacaatatatctcaaaaagagcacc 10573819  T
Q  133 ctaaatgctatactatatc 151  Q
       |||| |||||||||||    
T  10573818 accaatgatatactatatc 10573800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 35342738 - 35342603
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    |||||| |||| |||||||||||||||||||||| ||| |||| ||||| |||||||||||| ||||||||| |||||||||| | | | || |||| ||    
T  35342738 catcaaaataaatataaataatattgacgattaagagattgattattagccaattacatacacaatatatcctaaaaagagcatcatcagtgttatatta 35342639  T
Q  148 tatcaaaaagaaacattattaatggtatattatatc 183  Q
    |||| ||||| |||||| ||| || |||| ||||||    
T  35342638 tatccaaaaggaacattgttagtgttatactatatc 35342603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 40431741 - 40431876
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| || |||||||||||| |||||| ||| ||||| ||||||||||||||||| || |||||| |||||||||||| |   || |||||||    
T  40431741 catcaacataaatacaaataatattgatgattaacagagtgatgcttagtcaattacatacacaaaatatcctaaaaagagcaccatcggtgttatacta 40431840  T
Q  148 tatcaaaaagaaacattattaatggtatattatatc 183  Q
    |||| ||||| |||||| ||| || |||| ||||||    
T  40431841 tatccaaaaggaacattgttagtgttatactatatc 40431876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 6125127 - 6125034
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||||||| || | |||||||||||||||||  ||||||| ||||||||||||||    
T  6125127 ctcgtagcacattaacataaatataaataatattgacgattaaaagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 6125034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 12819743 - 12819663
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||| ||| |||| ||||||||||||||    
T  12819743 aacataaatataaataatattgacgattaatagagtggtgattagtcaattacatacgtaaaatataccaaaaagagcacc 12819663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 191
Target Start/End: Complemental strand, 18301529 - 18301373
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacccta--- 135  Q
    |||||||  ||| ||||||| |||||||||||||||| ||||| ||| || |||||||||||||||||||  || |||| |||||||||||||| ||       
T  18301529 ctcgtagcacattaacataaatataaataatattgacaattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcaccatacat 18301430  T
Q  136 -aatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
     |||| |||| |||||| ||||| ||||||  || || ||||||||||| |||||||    
T  18301429 caatgttatattatatccaaaaggaacattgctagtgctatattatatcgatccaaa 18301373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 22485226 - 22485132
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    ||||||||||  ||| || |||| |||||||||||||||||||||| ||| || | |||||||||||||||||| ||||||| ||||||||||||    
T  22485226 aggctcgtagcacattaatataaatataaataatattgacgattaagagagtggtcattagtcaattacatacacaatatataccaaaaagagca 22485132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 9293744 - 9293649
Alignment:
Q  87 tgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacattattaatggtatattatat 182  Q
    ||||||||||||||||| || |||| |||||||||||||||||||| | |||| ||||||||||| ||||  |||||| ||| || ||||| ||||    
T  9293744 tgatgattagtcaattaaatgcatattatatcccaaaaagagcaccattaatgttatactatatccaaaaagaacattgttagtgctatataatat 9293649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 40308013 - 40308091
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    ||||||| |||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| || |||||||||    
T  40308013 aacataaatataaataatattgacgattaagagagtggtcattagtcaattacatactcaatatataccgaaaagagca 40308091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 6496849 - 6496927
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcac 131  Q
    ||||||| |||||||||||||||||||| ||||| || | |||||||||||||||||  |||||||  ||||||||||||    
T  6496849 aacataaatataaataatattgacgattgaaagagtggtcattagtcaattacatacgaaatatat-acaaaaagagcac 6496927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 14216940 - 14217003
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagt 97  Q
    ||||||||||||   |||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  14216940 ataggctcgtagcatatcaacataaatataaataatattgacgattaagagagtgatgattagt 14217003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 20537269 - 20537214
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacata 107  Q
    ||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||    
T  20537269 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 20537214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 21104907 - 21104817
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaa 125  Q
    |||||||||||   |||||||||||  ||||||||||||||||||||| ||| |||| | ||  |||||||||||| |||||||||||||||    
T  21104907 ataggctcgtaatacatcaacataaacataaataatattgacgattaagagagtgatta-taaccaattacatacacaatatatcccaaaaa 21104817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 5371516 - 5371430
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaa 125  Q
    |||||||  ||| ||||||| |||| ||||||||||||||||| ||| || |||||||||||||||||||  || |||| |||||||    
T  5371516 ctcgtagtacattaacataaatatacataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaa 5371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 4169682 - 4169790
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacccta 135  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| |  | |||||||||||||||||  ||||| |  ||||||||||||| |     
T  4169682 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtagtcattagtcaattacatacgcaatatgt-acaaaaagagcaccatc 4169780  T
Q  136 aatgctatac 145  Q
    | ||||||||    
T  4169781 agtgctatac 4169790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 7807045 - 7807112
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||||||||| ||| || | |||||  ||||||||||  ||||||| ||||||||||||||    
T  7807045 ataatattgacgattaagagagtggtcattagaaaattacatacgcaatatataccaaaaagagcacc 7807112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 23078792 - 23078949
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||| |||  ||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||||||||| |     
T  23078792 ataggctcatagcacatcaacataaatataaataatattgacgattaagagagtgatgattactcaattacatacacaatatatcccaaaaagagcatca 23078891  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    | | |||||||||||||||||||| |||||| ||| || |||| |||||| |||||||    
T  23078892 tcagtgctatactatatcaaaaaggaacattgttagtgctatactatatcgatccaaa 23078949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 554595 - 554752
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| ||||| ||||||| |||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| |     
T  554595 ataggctcgtagcacatcaacataaatataagtaatattaacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcatca 554694  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| || ||||||||||| |||||| ||||| ||| || |||| |||||| |||||||    
T  554695 taagtgatatactatatctaaaagatacattgttagtgttatactatatcgatccaaa 554752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 44270152 - 44270003
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||     
T  44270152 ataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgatgattagtcaattacataaacaatatatcccaaaaagagcacca 44270053  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    | |||| ||||||||||| ||||| |||||| ||| || |||| ||||||    
T  44270052 ttaatgttatactatatccaaaaggaacattgttagtgttatactatatc 44270003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 48153955 - 48153798
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| ||||||||||  |||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| |     
T  48153955 ataggctcgtaacacatcaacataaatataaataatggtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcatca 48153856  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| |||||||||||||| ||||| |||||| ||| || |||| |||||| |||||||    
T  48153855 taagtgctatactatatccaaaaggaacattgttagtgctatactatatcgatccaaa 48153798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 21409800 - 21409643
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||| |||  ||||||||||| | |||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| |     
T  21409800 ataggctcatagcacatcaacataaatgtaaataatattgacgattaagagagtggtgattagtcaattacatacacaatatattccaaaaagagcaaca 21409701  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| |||||||||||||| |||||||| ||| ||| || |||| |||||| |||||||    
T  21409700 taagtgctatactatatccaaaagaaatattgttagtgctatactatatcgatccaaa 21409643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 36757695 - 36757831
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| ||||||||| ||||| |||||| ||| |||||||||||||||||||||||||||||||||||| || ||||||     
T  36757695 ataggctcgtagcacatcaacataaatataaataacattgatgattaagagagtgatgattagtcaattacatacataatatatcccaagaaaagcacca 36757794  T
Q  134 taaatgctatactatatcaaaaagaaacattattaat 170  Q
    | | |||||||||||||| ||||| |||||| |||||    
T  36757795 tcagtgctatactatatccaaaaggaacattgttaat 36757831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 36767219 - 36767355
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| ||||||||| ||||| |||||| ||| |||||||||||||||||||||||||||||||||||| || ||||||     
T  36767219 ataggctcgtagcacatcaacataaatataaataacattgatgattaagagagtgatgattagtcaattacatacataatatatcccaagaaaagcacca 36767318  T
Q  134 taaatgctatactatatcaaaaagaaacattattaat 170  Q
    | | |||||||||||||| ||||| |||||| |||||    
T  36767319 tcagtgctatactatatccaaaaggaacattgttaat 36767355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 191
Target Start/End: Complemental strand, 24956643 - 24956502
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaa-tgctatact 146  Q
    ||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||    
T  24956643 catcaacataaatataaataatattgacaattaatagagtgatgattagtcaattacatacataatatatcccaaagagagcaccataaagtgctatact 24956544  T
Q  147 atatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
       || |||||||||||| ||| || |||| |||||| |||||||    
T  24956543 ---tccaaaagaaacattgttagtgctatactatatcgatccaaa 24956502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 23969862 - 23969988
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaacatt 164  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||||||| ||||| ||||||    
T  23969862 ataatagtgacgattaagagagtgatgattagtcaattacatacacaatttatcccaaaaagagcaccataagtgctatactatatccaaaaggaacatt 23969961  T
Q  165 attaatggtatattatatcaatccaaa 191  Q
     ||| || |||| |||||| |||||||    
T  23969962 gttagtgctatactatatcgatccaaa 23969988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 1399952 - 1400100
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  |||||| |||| |||||||||||||||||||||| | | |||| |||||||||||||||||| |||||||||||||||||||| |     
T  1399952 ataggctcgtagtacatcaa-ataaatataaataatattgacgattaagatagtgattattagtcaattacatacacaatatatcccaaaaagagcatca 1400050  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    | |||| ||||||||||| ||||| |||||| ||| || |||| ||||||    
T  1400051 tcaatgttatactatatccaaaaggaacattgttagtgttatactatatc 1400100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 15878107 - 15878256
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| |||| ||||| |||||||||||| |||||||||||||||||||| |     
T  15878107 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgattattagccaattacatacacaatatatcccaaaaagagcatca 15878206  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    | | || ||||||||||| ||||  |||||| ||| || |||| ||||||    
T  15878207 tcagtgttatactatatccaaaatgaacattgttagtgttatactatatc 15878256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 19820681 - 19820830
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||| ||||||  ||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||| || |||||||| |||||||||||||     
T  19820681 ataggttcgtagcacatcaacataaatataaataatattgacgattaaaatagtgatgattagtcaattacatgcacaatatatctcaaaaagagcacca 19820780  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    | | |  ||||||||||| ||||| |||||| ||| || |||| ||||||    
T  19820781 tcagtattatactatatccaaaaggaacattgttagtgctatactatatc 19820830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 38065102 - 38064946
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||| ||  ||||||||||| |||||| |||||||| |||||| | | | ||||||||||||||||||||  ||||||||||||||||||||||     
T  38065102 ataggctcgaagcacatcaacataaatataaacaatattgatgattaagatagtcatgattagtcaattacatacgcaatatatcccaaaaagagcacca 38065003  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    | | |||||||||||||| ||||| |||||| ||| || ||||||||||| |||||||    
T  38065002 t-agtgctatactatatccaaaaggaacattgttagtgttatattatatcgatccaaa 38064946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 36763475 - 36763610
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| ||||||||| ||||| |||||| ||| ||||||||||||||||||||||| ||||||| ||||||| ||||||     
T  36763475 ataggctcgtagcacatcaacataaatataaataacattgatgattaagagagtgatgattagtcaattacatacacaatatat-ccaaaaaaagcacca 36763573  T
Q  134 taaatgctatactatatcaaaaagaaacattattaat 170  Q
    | | |||||||||||||| ||||| |||||| |||||    
T  36763574 tcagtgctatactatatccaaaaggaacattgttaat 36763610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 11058832 - 11058748
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  11058832 catcaacataaatataagtaatattgacgattaagagaatgatgatttgtcaattacatatataatatatcccaaaaagagcacc 11058748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 35160298 - 35160162
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||| |||||||  ||||||||||| ||||||||| ||| |  ||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||||||     
T  35160298 atagactcgtagcacatcaacataaatataaataacattaataattaagagagtgatgattagtcaattacatacacaatatatcccaaaaaaagcacca 35160199  T
Q  134 taaatgctatactatatcaaaaagaaacattattaat 170  Q
    | | |||||||||||||| ||||| |||||| |||||    
T  35160198 ttagtgctatactatatccaaaaggaacattgttaat 35160162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 47719856 - 47719936
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  47719856 aacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacataatatataccaaaaagagcacc 47719936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 9249994 - 9250120
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| |     
T  9249994 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatca 9250093  T
Q  134 taaatgctatactata-tcaaaaagaa 159  Q
    | | || ||||||||| ||||||||||    
T  9250094 tcagtgatatactatattcaaaaagaa 9250120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 9283544 - 9283670
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| |     
T  9283544 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatca 9283643  T
Q  134 taaatgctatactata-tcaaaaagaa 159  Q
    | | || ||||||||| ||||||||||    
T  9283644 tcagtgatatactatattcaaaaagaa 9283670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 25969939 - 25969813
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| |     
T  25969939 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatca 25969840  T
Q  134 taaatgctatactata-tcaaaaagaa 159  Q
    | | || ||||||||| ||||||||||    
T  25969839 tcagtgatatactatattcaaaaagaa 25969813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 33454487 - 33454345
Alignment:
Q  49 atcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactat 148  Q
    |||||||||| ||||||| |||  ||||||||| |||||||||||||||| |||||||||| ||||||| |||||||||||| | | | ||||||| |||    
T  33454487 atcaacataaatataaattataccgacgattaagagaatgatgattagtcgattacatacacaatatataccaaaaagagcatcatcagtgctatattat 33454388  T
Q  149 atcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| ||||  |||||| ||| || |||| |||||| |||||||    
T  33454387 atccaaaatgaacattgttagtgttatactatatcgatccaaa 33454345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 21180250 - 21180133
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||| ||||  ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||| ||| | ||||||||||||||||| || |     
T  21180250 ataggcttgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattagatatacaatatatcccaaaaagaacatca 21180151  T
Q  134 taaatgctatactatatc 151  Q
    | | || |||||||||||    
T  21180150 tcagtgttatactatatc 21180133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 35136424 - 35136305
Alignment:
Q  49 atcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactat 148  Q
    |||||||||| ||||| |||||||| | ||||| ||||||||||||||||||||||||| | |||||||| ||||||||||| | | ||||||||| |||    
T  35136424 atcaacataaatataagtaatattggcaattaagagaatgatgattagtcaattacatatacaatatatctcaaaaagagcatcattaatgctataatat 35136325  T
Q  149 atcaaaaagaaacattatta 168  Q
    ||  ||||  ||||||||||    
T  35136324 attcaaaatgaacattatta 35136305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 44959047 - 44959150
Alignment:
Q  61 ataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaa 160  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||  | | || | ||||||||| ||||| ||    
T  44959047 ataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatctcaaaaagagcactatgagtgttgtactatatccaaaaggaa 44959146  T
Q  161 catt 164  Q
    ||||    
T  44959147 catt 44959150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 36413779 - 36413630
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||| |||||||  ||||||||||| ||||||||||||||| ||||||  || ||||| ||| ||||||||||||| ||||||||| |||||||||| |     
T  36413779 atagactcgtagcacatcaacataaatataaataatattgatgattaagtgagtgatgcttaatcaattacatacacaatatatcctaaaaagagcatca 36413680  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    |   || ||||||||||| ||||| |||||| ||| || |||| ||||||    
T  36413679 tcggtgttatactatatccaaaaggaacattgttagtgttatactatatc 36413630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 145
Target Start/End: Complemental strand, 36661405 - 36661313
Alignment:
Q  53 acataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 145  Q
    |||||| |||||||||||||||||||||| ||| || | ||||||||||||||||| |||||||| |||||||||||||| | | ||||||||    
T  36661405 acataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgtaatatataccaaaaagagcaccatcagtgctatac 36661313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 47237911 - 47238007
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| | | ||||||||||||||||||||||  || |||| ||||||||||||||    
T  47237911 aggctcgtagcacattaacataaatataaataatattgacgattaagaaagtgatgattagtcaattacatacgcaaaatataccaaaaagagcacc 47238007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 40053687 - 40053573
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| ||||||||||||||| || ||| ||| |||||||||||||||||||||   |||||| | ||||||||||||| | | || |||||||    
T  40053687 catcaacataaatataaataatattgatgactaagagagtgatgattagtcaattacatatgcaatatacctcaaaaagagcaccatcagtgttatacta 40053588  T
Q  148 tatcaaaaagaaaca 162  Q
    |||| ||||| ||||    
T  40053587 tatccaaaaggaaca 40053573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 16563931 - 16564011
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  16563931 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 16564011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 16601731 - 16601651
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  16601731 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 16601651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 26773269 - 26773349
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  26773269 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 26773349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 19511059 - 19510904
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacccta--- 135  Q
    |||||||  ||| |||| || |||||||||||||||| ||||| ||| || |||||||||||||||||||  || |||| | |||||||||||| ||       
T  19511059 ctcgtagcacattaacaaaaatataaataatattgacaattaagagagtggtgattagtcaattacatactcaaaatatacaaaaaagagcaccatacat 19510960  T
Q  136 -aatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaa 190  Q
     |||| ||||||||||| ||||| ||||||  || || ||||||||||| ||||||    
T  19510959 caatgttatactatatccaaaaggaacattgctagtgttatattatatcgatccaa 19510904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 8029252 - 8029159
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || |||||||||| ||||||||  || |||| ||||||||||||||    
T  8029252 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcacttacatacgcaaaatataccaaaaagagcacc 8029159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 1042756 - 1042836
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||| |||||||||||||||| ||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  1042756 aacataaatataaataatattgacaattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 1042836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 39521521 - 39521427
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| || | |||| ||||||||||||  ||||||| | ||||||||||    
T  39521521 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattaatcaattacatacgcaatatatacaaaaaagagca 39521427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 26973471 - 26973398
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacata 107  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| |||  |||| |||||||||||    
T  26973471 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgacaattactcaattacata 26973398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 4292111 - 4292020
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    |||||||  ||| ||||||| |||||||| |||| |||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||    
T  4292111 ctcgtagcacattaacataaatataaatactattaacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagca 4292020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 145
Target Start/End: Original strand, 27397298 - 27397387
Alignment:
Q  55 ataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 145  Q
    |||| |||||||||||||||||||||| ||| || | |||||||||||||||||  |||||||  ||||||||||||| | | ||||||||    
T  27397298 ataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatat-acaaaaagagcaccatcagtgctatac 27397387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 4292003 - 4291948
Alignment:
Q  136 aatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    |||||||||||||||| ||||| |||||| |||||| |||| |||||| |||||||    
T  4292003 aatgctatactatatccaaaaggaacattgttaatgttatactatatcgatccaaa 4291948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 16851232 - 16851165
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||||||||| ||| || | |||||  ||||||||||  ||||||| ||||||||||||||    
T  16851232 ataatattgacgattaagagagtggtcattagataattacatacgcaatatataccaaaaagagcacc 16851165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 40096590 - 40096531
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaa 124  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||    
T  40096590 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaa 40096531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 145
Target Start/End: Complemental strand, 11830629 - 11830537
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 145  Q
    ||||||| |||||||||||||||| ||||| | | || | ||| |||||||||||||  |||||||  ||||||||||||| | | ||||||||    
T  11830629 aacataaatataaataatattgacaattaagatagtggtcattggtcaattacatacgcaatatat-acaaaaagagcaccatcagtgctatac 11830537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 3e-41; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 3934492 - 3934649
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||| || |     
T  3934492 ataggctcgtagcacatgaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatctcaaaaagatcatca 3934591  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| || ||||||||||| |||||||||||| ||| || ||||||||||| |||||||    
T  3934592 taagtgttatactatatccaaaagaaacattgttagtgttatattatatcgatccaaa 3934649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 26692052 - 26691895
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||     
T  26692052 ataggctcgtaccacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcacca 26691953  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    | |||| ||||||||||| ||||| |||||| ||| || |||| | |||| |||||||    
T  26691952 tcaatgttatactatatccaaaaggaacattgttagtgttatactctatcgatccaaa 26691895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 26961784 - 26961627
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||     
T  26961784 ataggctcgtaccacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcacca 26961685  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    | |||| ||||||||||| ||||| |||||| ||| || |||| | |||| |||||||    
T  26961684 tcaatgttatactatatccaaaaggaacattgttagtgttatactctatcgatccaaa 26961627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 48 - 191
Target Start/End: Complemental strand, 21251883 - 21251740
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||| |||| | | ||||||||||    
T  21251883 catcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcgcaaaaagaacaccatcagtgctatacta 21251784  T
Q  148 tatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    |||| ||||| |||||| |||||| |||| |||||| |||||||    
T  21251783 tatccaaaaggaacattgttaatgctatactatatcgatccaaa 21251740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 25750019 - 25749862
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||     
T  25750019 ataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatctcaaaaagagcacca 25749920  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| ||||| |||||||| ||||  |||||| ||| || ||||||| ||| |||||||    
T  25749919 taagtgctacactatatccaaaatgaacattgttagtgctatattacatcgatccaaa 25749862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 26716686 - 26716529
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||     
T  26716686 ataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcacca 26716587  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||  || ||||||||||| ||||  |||||| ||| || |||| |||||| |||||||    
T  26716586 taggtgttatactatatccaaaatgaacattgttagtgctatactatatcgatccaaa 26716529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 26986426 - 26986269
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||     
T  26986426 ataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcacca 26986327  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||  || ||||||||||| ||||  |||||| ||| || |||| |||||| |||||||    
T  26986326 taggtgttatactatatccaaaatgaacattgttagtgctatactatatcgatccaaa 26986269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 1795807 - 1795649
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatccca-aaaagagcacc 132  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||| | ||||||||||| |||| ||||||    
T  1795807 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatatacaatatatcccaaaaaaaagcacc 1795708  T
Q  133 ctaaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
     ||| || ||||||||||| |||||||||||| ||| || |||| |||||| |||||||    
T  1795707 ataagtgttatactatatccaaaagaaacattgttagtgctatactatatcgatccaaa 1795649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 3701498 - 3701342
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||| ||||||||||||||| ||| |||||||||||||||||||| || ||||||| ||||||||||||||     
T  3701498 ataggctcgtagcgcatcaacataaatataaaaaatattgacgattaagagagtgatgattagtcaattacatgcacaatatat-ccaaaaagagcacca 3701400  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    | | |||||||||||||| ||||| |||||| ||| || |||| |||||| |||||||    
T  3701399 tcagtgctatactatatccaaaaggaacattgttagtgttatactatatcgatccaaa 3701342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 7629459 - 7629302
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| |||||||||||||| ||||||| ||| ||||||||||||||| ||||||| |||||||||||||||||||| |     
T  7629459 ataggctcgtaacacatcaacataaatataaataatattggcgattaagagagtgatgattagtcaatgacatacacaatatatcccaaaaagagcatca 7629360  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    | | |||||||||||||| |||||| ||||| ||| || |||| |||||| |||||||    
T  7629359 ttagtgctatactatatccaaaagatacattgttagtgctatactatatcgatccaaa 7629302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 27938572 - 27938415
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||   |||||||||| ||||||||||| |||||||||| ||| |||| |||||||||||||||||| ||||||||||||||||||||||     
T  27938572 ataggctcgtagcatatcaacataaatataaataatagtgacgattaagagagtgataattagtcaattacatacacaatatatcccaaaaagagcacca 27938473  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||  |||||||||||||| ||||| |||| | ||| || || | |||||| |||||||    
T  27938472 tacgtgctatactatatccaaaaggaacactgttagtgctacactatatcgatccaaa 27938415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 48 - 191
Target Start/End: Original strand, 17137953 - 17138094
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| || ||||| |||||||||| ||||||||||| | ||||||||| ||    
T  17137953 catcaacataa-tataaataatattgacgattaagagagtgatgattagtcaaatatatacacaatatatccc-aaaagagcaccatcaatgctatatta 17138050  T
Q  148 tatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    |||  ||||| |||||| ||| || |||||||||||||||||||    
T  17138051 tatgcaaaaggaacattgttagtgctatattatatcaatccaaa 17138094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 49 - 164
Target Start/End: Original strand, 39796664 - 39796779
Alignment:
Q  49 atcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactat 148  Q
    |||||||||| ||||| |||||||||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||| | |||| ||||||||    
T  39796664 atcaacataaatataagtaatattgacgattaagagagtgatgattagtcaattacatatacaatatatcccaaaaagagcaccatcaatgttatactat 39796763  T
Q  149 atcaaaaagaaacatt 164  Q
    ||| ||||| ||||||    
T  39796764 atctaaaaggaacatt 39796779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 191
Target Start/End: Complemental strand, 14836744 - 14836588
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaa-aaagagcaccct 134  Q
    ||||||||||  ||||||||||| ||||||||||||||||| |||| ||| ||| ||||||||||||||||||| |||||||| ||| ||| |||||| |    
T  14836744 aggctcgtagcacatcaacataaatataaataatattgacggttaagagagtgacgattagtcaattacatacaaaatatatctcaataaaaagcaccat 14836645  T
Q  135 aaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    || || ||||||||||| ||||||||| || ||| || |||| |||||| |||||||    
T  14836644 aagtgttatactatatccaaaagaaactttgttagtgatatactatatcgatccaaa 14836588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 43357465 - 43357613
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatccc-aaaaagagcacc 132  Q
    |||||||||||   ||||||||||| |||||||||||||||||||||| ||| ||| |||  ||||||||||||||||||||||||| ||||| ||||||    
T  43357465 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtgacgat--gtcaattacatacataatatatcccaaaaaaaagcacc 43357562  T
Q  133 ctaaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
     ||| | |||||||||||| |||||||||||| ||| || |||| ||||||    
T  43357563 ataagtactatactatatccaaaagaaacattgttagtgctatactatatc 43357613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 1921196 - 1921038
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| |||||||||||  ||||||| || |||||||||||||||||||| |     
T  1921196 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtatattacatgcaaaatatatcccaaaaagagcatca 1921097  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggt-atattatatcaatccaaa 191  Q
    | | || ||||||||||| ||||| | |||| ||| || | |||||||||| |||||||    
T  1921096 tcagtgatatactatatccaaaaggatcattgttagtgttaatattatatcgatccaaa 1921038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 42365806 - 42365904
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||||||||||||||||    
T  42365806 ataggctcgtagcacatcaacataaatataaataatattgacgattaacagagtgatgattagtcaattagatgcacaatatatcccaaaaagagcacc 42365904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 15066598 - 15066469
Alignment:
Q  62 taaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaac 161  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||||||||| | | ||||||||||||||  |||| |||    
T  15066598 taaataatattgacgattaagagagtaatgattagtcaattacatacacaatatatcccaaaaagagcaccatcagtgctatactatatccgaaaggaac 15066499  T
Q  162 attattaatggtatattatatcaatccaaa 191  Q
    ||| ||| || |||| |||||  |||||||    
T  15066498 attgttagtgttatactatattgatccaaa 15066469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 6242727 - 6242861
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||| | |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||| |||||| |   ||||||||||    
T  6242727 catcaacattaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatataccaaaaaaagcaccatcggtgctatacta 6242826  T
Q  148 tatcaaaaagaaacattattaatggtatattatat 182  Q
    |||| ||||  |||||| ||| || |||| |||||    
T  6242827 tatccaaaaagaacattgttagtgttatactatat 6242861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 30777093 - 30777219
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| |     
T  30777093 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatca 30777192  T
Q  134 taaatgctatactata-tcaaaaagaa 159  Q
    | | || ||||||||| ||||||||||    
T  30777193 tcagtgatatactatattcaaaaagaa 30777219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 18001661 - 18001778
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||| |||| |||||||||||| |||||||||||||||| | ||| ||| ||||||||| |||||||||||   ||||||||||||||||||||||     
T  18001661 ataggcttgtagcccatcaacataaatataaataatattgacaagtaagagagtgatgattaatcaattacatatccaatatatcccaaaaagagcacca 18001760  T
Q  134 taaatgctatactatatc 151  Q
    | | ||||||||||||||    
T  18001761 tcagtgctatactatatc 18001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 61 - 191
Target Start/End: Complemental strand, 11907699 - 11907569
Alignment:
Q  61 ataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaaa 160  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||||| | | || ||||||||||| |||||  |    
T  11907699 ataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcagtgttatactatatccaaaaggta 11907600  T
Q  161 cattattaatggtatattatatcaatccaaa 191  Q
    |||| ||  || |||| |||||| |||||||    
T  11907599 cattgttggtgttataatatatcgatccaaa 11907569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 34032754 - 34032668
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatc 151  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||||||||||| | | ||||||||||||||    
T  34032754 ataatattgacgattaagagagtgatgattaatcaattacatacacaatatatcccaaaaagagcaccatcagtgctatactatatc 34032668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 5612170 - 5612275
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||| |||||| ||   | | ||||||||||    
T  5612170 catcaacataaatatgaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatccccaaaagaacattgttagtgctatacta 5612269  T
Q  148 tatcaa 153  Q
    ||||||    
T  5612270 tatcaa 5612275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 5722395 - 5722282
Alignment:
Q  51 caacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatat 150  Q
    |||||||| ||||||| ||| |||||||||| |||||||||||||||| |||||||||| ||||||| |||||||||||| | | | ||||||| |||||    
T  5722395 caacataaatataaattatactgacgattaagagaatgatgattagtcgattacatacacaatatataccaaaaagagcatcatcagtgctatattatat 5722296  T
Q  151 caaaaagaaacatt 164  Q
    | |||| |||||||    
T  5722295 ccaaaataaacatt 5722282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 39689890 - 39689986
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| || | |||||||||||||||||| ||||||| ||||||||||||||    
T  39689890 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacacaatatataccaaaaagagcacc 39689986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 9728093 - 9728176
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatat 117  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||||| ||| |||||||||||||||||| |||| |||||||    
T  9728093 ataggctcgtagaacatcaacataaatataaataatattgatgattaagagagtgatgattagtcaattacgtacacaatatat 9728176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 191
Target Start/End: Complemental strand, 27085788 - 27085627
Alignment:
Q  33 aataggctcgtagaccatcaacataagta----taaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagag 128  Q
    |||||||||||||  ||||||||||| ||    ||||||||||||| |||||| | | |||| |||||||||||||||||| ||||||| ||||||||||    
T  27085788 aataggctcgtagcacatcaacataaataattataaataatattgatgattaagaaagtgataattagtcaattacatacacaatatat-ccaaaaagag 27085690  T
Q  129 caccctaaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||||   | |||||||||||||  ||||  |||||| ||| || ||||||||||| |||||||    
T  27085689 caccacgagtgctatactatattcaaaatgaacattgttagtgctatattatatcgatccaaa 27085627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 41233730 - 41233634
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    ||||||| ||||  ||||||||||| |||||||||||||||||||||| ||  ||||||||||||||||||||| |  |||||| ||||||||||||    
T  41233730 ataggcttgtagcacatcaacataaatataaataatattgacgattaagagcgtgatgattagtcaattacatatacgatatataccaaaaagagca 41233634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 30919103 - 30919009
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||    
T  30919103 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagca 30919009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 30284283 - 30284368
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcc 119  Q
    |||||||| |||  ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||| | ||| |||||||||    
T  30284283 ataggctcctagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattagaaacacaatatatcc 30284368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 10657388 - 10657308
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  10657388 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 10657308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 5985640 - 5985731
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||    
T  5985640 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagca 5985731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 9654148 - 9654065
Alignment:
Q  49 atcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||||| ||||| ||||||| || ||||| | |||||||||||||||||| |||||| |||||||| |||||||||||||    
T  9654148 atcaacataaatataagtaatattaacaattaagaaaatgatgattagtcaattgcatacacaatatatcacaaaaagagcacc 9654065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 22738266 - 22738170
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatga---ttagtcaattacatacataatatatcccaaaaaga 127  Q
    |||||||||||   ||||||||||| ||||||||||||| |||||||| ||| ||||||   ||||||| ||||||||| |||||||||||||||||    
T  22738266 ataggctcgtaacacatcaacataaatataaataatattaacgattaagagagtgatgatatttagtcagttacatacacaatatatcccaaaaaga 22738170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 26794161 - 26794255
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    ||||||||||  ||| ||||||| |||||||||||||||| ||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||    
T  26794161 aggctcgtagcacattaacataaatataaataatattgacaattaagagagtgctcattagtcaattacatacgcaatatataccaaaaagagca 26794255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 11694527 - 11694466
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgatta 95  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||||| ||| |||||||||    
T  11694527 ataggctcgtagcacatcaacataagtataaataatattcacgattaagagagtgatgatta 11694466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 9793226 - 9793159
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||||    
T  9793226 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 9793159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 35746099 - 35746162
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagt 97  Q
    ||||||||||||  ||||||||||| |||||||||||||||| ||||| ||| |||||||||||    
T  35746099 ataggctcgtagcacatcaacataaatataaataatattgacaattaagagagtgatgattagt 35746162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 1638952 - 1639045
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||  ||| ||||||| ||||||||||||||||||||  |||| || | |||||||||||||||||  |||||||  |||||||||||||    
T  1638952 aggctcgtagcacattaacataaatataaataatattgacgatt--aagagtggtcattagtcaattacatacgcaatatat-acaaaaagagcacc 1639045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 3e-41; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 25701198 - 25701049
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||||||     
T  25701198 ataggctcgtaggacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacaaacacaatatatcccaaaaagagcaccg 25701099  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    | | |||||||||||||| ||||| |||||| ||| || |||| ||||||    
T  25701098 tcagtgctatactatatccaaaaggaacattgttagtgttatactatatc 25701049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 7899402 - 7899560
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||| ||||  ||||||||||| |||||||||||||||||||||| ||| |||| ||||| |||||||||||| ||||||||||||||||||||||     
T  7899402 ataggcttgtagcacatcaacataaatataaataatattgacgattaagagagtgattattagccaattacatacacaatatatcccaaaaagagcacca 7899501  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaac 192  Q
    | | || ||||||| ||| ||||||||||||  || || |||| |||||| ||||||||    
T  7899502 tcagtgttatactacatccaaaagaaacattgctagtgctatactatatcgatccaaac 7899560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 20509839 - 20509996
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| ||||||||||| ||| |||||| ||| ||||||||||||||||||||||| |||||||||||||| |||||||     
T  20509839 ataggctcgtagcacatcaacataaatataaataatagtgatgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaggagcacca 20509938  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    | |||| ||||||||||| ||||  |||||| ||| || |||| ||| || |||||||    
T  20509939 tcaatgatatactatatccaaaatgaacattgttagtgttatactatgtcgatccaaa 20509996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 48 - 191
Target Start/End: Original strand, 19878800 - 19878942
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||||||   | ||||||| ||    
T  19878800 catcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatat-ccaaaaagagcaccaccagtgctataata 19878898  T
Q  148 tatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    |||| ||||| || ||| ||| || ||||||||||| |||||||    
T  19878899 tatccaaaaggaatattgttagtgatatattatatcgatccaaa 19878942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 22289427 - 22289583
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||| ||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||  ||||||||||||||| | ||||     
T  22289427 ataggctcgtagtacatcaacgtaaatataaataatattgacgattaatagagtgatgattattcaattacataccgaatatatcccaaaaa-aacacca 22289525  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| || ||||||||||| |||||||||||| ||| || | || |||||| |||||||    
T  22289526 taagtgttatactatatccaaaagaaacattgttagtgttgtactatatcgatccaaa 22289583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 52684762 - 52684613
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||| |||||||  ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||     
T  52684762 atagactcgtagcacatcaacataaatataaataatattgacgattaaaagagtggtgattagtcaattacatacacaatatataccaaaaagagcacca 52684663  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    |   || ||||||||||| ||||  |||||| ||| || |||| ||||||    
T  52684662 tcggtgttatactatatccaaaaagaacattgttagtgttatactatatc 52684613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 35 - 191
Target Start/End: Original strand, 45056985 - 45057141
Alignment:
Q  35 taggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccct 134  Q
    |||||||||||  ||||||||||| ||||||||||||  || ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||||||||      
T  45056985 taggctcgtagcgcatcaacataaatataaataatatcaacaattaagagagtgatgattagtcaattacatacacaatatatcctaaaaagagcaccag 45057084  T
Q  135 aaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
     | |||||||||||||  |||||||||||| ||| || | || |||||| |||||||    
T  45057085 cagtgctatactatatacaaaagaaacattgttagtgttgtactatatcgatccaaa 45057141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 25322219 - 25322330
Alignment:
Q  53 acataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatca 152  Q
    |||||| ||||| |||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||  | |||| |||||||||||     
T  25322219 acataaatataagtaatattgacgattaagagagtgatgattagtcaattacatatataatatatcccaaaaagagcactatcaatgttatactatatcc 25322318  T
Q  153 aaaagaaacatt 164  Q
    ||||| ||||||    
T  25322319 aaaaggaacatt 25322330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 13352878 - 13353008
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||  ||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||| ||||| | ||||     
T  13352878 ataggctcgtagcacatcaacatagatataaataatattgaggattaaaagtatgataattagtcaattacatacacaatatatcctaaaaacaacacca 13352977  T
Q  134 taaatgctatactatatcaaaaagaaacatt 164  Q
    | |||| ||||||||||| ||||| ||||||    
T  13352978 ttaatgatatactatatccaaaaggaacatt 13353008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 212929 - 212812
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||| ||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||||||||| |     
T  212929 ataggctcgtaccacatcaacgtaaatataaataatattgacgattaagagagtgattattagtcaattacatacataatatatctcaaaaagagcaaca 212830  T
Q  134 taaatgctatactatatc 151  Q
    | | ||||||||||||||    
T  212829 tgagtgctatactatatc 212812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 28968946 - 28968797
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  |||||| |||| |||||||||||||||| ||||| ||| |||| ||||  |||||||||||| |||||||||||||||||||| |     
T  28968946 ataggctcgtagcacatcaatataaatataaataatattgacaattaatagagtgattattaaccaattacatacacaatatatcccaaaaagagcatca 28968847  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatc 183  Q
    | |||| ||||||||||| ||||  |||||| ||| || |||||||||||    
T  28968846 tcaatgttatactatatccaaaatgaacattgttagtgttatattatatc 28968797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 21006060 - 21006195
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||| | |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||||| |   ||||||||||    
T  21006060 catcaacatgaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcaccatcggtgctatacta 21006159  T
Q  148 tatcaaaaagaaacattattaatggtatattatatc 183  Q
    |||| ||||  |||||| ||| || |||| ||||||    
T  21006160 tatccaaaaagaacattgttagtgttatactatatc 21006195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 39 - 191
Target Start/End: Complemental strand, 35390301 - 35390141
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc------ 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||||||          
T  35390301 ctcgtagcacattaacataaatataaataatattgacgattaagagaatgatgattagtcaattacatacgtaaaatataccaaaaagagcaccagtgtc 35390202  T
Q  133 --ctaaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
       | |||| ||||||||||| ||||| |||||| |||||| |||| |||||| |||||||    
T  35390201 atatcaatgttatactatatccaaaaggaacattgttaatgttatactatatcgatccaaa 35390141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 47642427 - 47642292
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| |||||||||||||||||||||| ||| |||| ||||| |||||||||||| |||||||| ||||||||||| | | |||| |||||||    
T  47642427 catcaacataaatataaataatattgacgattaagagagtgattattagccaattacatacacaatatatcacaaaaagagcatcatcaatgttatacta 47642328  T
Q  148 tatcaaaaagaaacattattaatggtatattatatc 183  Q
    |||| ||||  |||||| ||| || |||| ||||||    
T  47642327 tatccaaaaagaacattgttagtgttatactatatc 47642292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 2123118 - 2122996
Alignment:
Q  38 gctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaa 137  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||  |  |||||||||||||||||| | || |||||||||||||||||||| | |||     
T  2123118 gctcgtagaacatcaacataaatataaataatattgacgattaagtgggtgatgattagtcaattactttcacaatatatcccaaaaagagcatcataag 2123019  T
Q  138 tgctatactatatcaaaaagaaa 160  Q
    || |||| |||||| ||||||||    
T  2123018 tgttatattatatccaaaagaaa 2122996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 2566966 - 2567050
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  2566966 catcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcacc 2567050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 38888794 - 38888893
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| |||||||||||||||||||||| | | ||||||||||||||||||||||| |||||||| ||||||||||| | | |||| |||||||    
T  38888794 catcaacataaatataaataatattgacgattaagacagtgatgattagtcaattacatacacaatatatctcaaaaagagcatcatcaatgttatacta 38888893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 21157457 - 21157562
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    ||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||| |||||| ||   | | ||||||||||    
T  21157457 catcaacataaatatgaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatccccaaaagaacattgttagtgctatacta 21157556  T
Q  148 tatcaa 153  Q
    ||||||    
T  21157557 tatcaa 21157562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 13748203 - 13748291
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaa 122  Q
    |||||||||||   ||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||    
T  13748203 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaa 13748291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 983605 - 983482
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||| |||||||  ||||||| ||| |||||||||||||||||| ||| ||| ||||||||| ||||||||||||| ||||||||  ||||||||||||     
T  983605 atagtctcgtagtacatcaacgtaaatataaataatattgacgaataagagagtgatgattaatcaattacatacacaatatatcataaaaagagcacca 983506  T
Q  134 taaatgctatactatatcaaaaag 157  Q
    | | ||||||||||| || |||||    
T  983505 tcagtgctatactatgtccaaaag 983482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 22311284 - 22311191
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| || |||| ||||||||||||||    
T  22311284 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaagatataccaaaaagagcacc 22311191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 48333375 - 48333218
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||| ||||||||||| ||||| ||| ||| | | |||||| |||||||| |||||||||| |||||| ||||     
T  48333375 ataggctcgtagcacatcaacataaatatatataatattgacaattaagagagtgacggtcagtcaactacatacacaatatatcccgaaaagaacacca 48333276  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    | | || ||||||||||| ||||| || ||| ||| || |||| |||||| |||||||    
T  48333275 tcagtgttatactatatccaaaaggaatattgttagtgctatactatatcgatccaaa 48333218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 42464300 - 42464394
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||    
T  42464300 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagca 42464394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 28882243 - 28882336
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  28882243 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 28882336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 145
Target Start/End: Complemental strand, 48123767 - 48123674
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 145  Q
    ||||||| |||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| |||||||||||||| | | ||||||||    
T  48123767 aacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcaccatcagtgctatac 48123674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 30787274 - 30787350
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatat 115  Q
    |||||||  ||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||||||| |||||    
T  30787274 ctcgtagcacatcaacataaatataaataatattaacgattaagagagtgatgattagtcaattacatacacaatat 30787350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 183
Target Start/End: Complemental strand, 29916191 - 29916056
Alignment:
Q  49 atcaacataagtataaataatattgacgattaaaagaatgatg-attagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    |||||||||| |||||||||||||| |||| || ||| ||||| ||||||| |||||||| | ||||||||||||||||| |||| | | || |||||||    
T  29916191 atcaacataaatataaataatattgtcgatcaagagagtgatggattagtcgattacataaacaatatatcccaaaaagaacaccatcagtgttatacta 29916092  T
Q  148 tatcaaaaagaaacattattaatggtatattatatc 183  Q
    |||| ||||  |||||| ||| || |||| ||||||    
T  29916091 tatccaaaatgaacattgttagtgttatactatatc 29916056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 183
Target Start/End: Complemental strand, 29965344 - 29965209
Alignment:
Q  49 atcaacataagtataaataatattgacgattaaaagaatgatg-attagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatacta 147  Q
    |||||||||| |||||||||||||| |||| || ||| ||||| ||||||| |||||||| | ||||||||||||||||| |||| | | || |||||||    
T  29965344 atcaacataaatataaataatattgtcgatcaagagagtgatggattagtcgattacataaacaatatatcccaaaaagaacaccatcagtgttatacta 29965245  T
Q  148 tatcaaaaagaaacattattaatggtatattatatc 183  Q
    |||| ||||  |||||| ||| || |||| ||||||    
T  29965244 tatccaaaatgaacattgttagtgttatactatatc 29965209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 10224319 - 10224413
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    ||||||||||  ||| ||||||| |||||||||||||||| ||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||    
T  10224319 aggctcgtagcacattaacataaatataaataatattgacaattaagagagtgctcattagtcaattacatacgcaatatataccaaaaagagca 10224413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 19421826 - 19421741
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatat 150  Q
    |||| ||||| | |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| | | ||||||| |||||    
T  19421826 ataaaattgatgcttaagagagtgatgattagtcaattacatacacaatatatcccaaaaagagcaccattagtgctatattatat 19421741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 25936254 - 25936347
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 145  Q
    ||||||| |||||| ||||||||||||||| ||| || | |||||||||||||||||  ||||||| |||||||||||||| | | ||||||||    
T  25936254 aacataaatataaacaatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcaccattagtgctatac 25936347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 28548459 - 28548363
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    ||||||||||||  ||||||||||| |||||||||||||  ||||||| ||| |||| |||||||||||||||| | | |||| | |||||||||||    
T  28548459 ataggctcgtagcacatcaacataaatataaataatattaccgattaagagagtgataattagtcaattacatatacactataactcaaaaagagca 28548363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 45347983 - 45347907
Alignment:
Q  38 gctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataata 114  Q
    ||||||||  ||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||| ||| ||||    
T  45347983 gctcgtagcacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacaaacacaata 45347907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 50286923 - 50287003
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||| ||||||||||||| |||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  50286923 aacataaatataaataatattaacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 50287003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 41741850 - 41741913
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagt 97  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  41741850 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagt 41741913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 145
Target Start/End: Original strand, 52505002 - 52505092
Alignment:
Q  55 ataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 145  Q
    |||| |||||||||||||||||||||| ||| || | |||||||||||||||||  ||||||| | |||||||||||| | | ||||||||    
T  52505002 ataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatatactaaaaagagcaccattagtgctatac 52505092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 47750631 - 47750739
Alignment:
Q  49 atcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataata-tatcccaaaaagagcaccctaaatgctatacta 147  Q
    |||||||||| ||||| ||||||||| |||||| ||| ||||||||| ||||||||||| | |||| |||||| ||||||||||| | |||  |||||||    
T  47750631 atcaacataaatataagtaatattgaagattaagagagtgatgattaatcaattacatatacaatattatccc-aaaagagcaccatcaatattatacta 47750729  T
Q  148 tatcaaaaag 157  Q
    |||| |||||    
T  47750730 tatccaaaag 47750739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 33241288 - 33241220
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacata 107  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||    
T  33241288 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 33241220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 39664831 - 39664671
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcc----caaaaagagc 129  Q
    ||||||||||||  | ||||||||| ||||||||||||||| |||||| ||| ||| |||| |||||||| ||| | |||||||||     ||||| |      
T  39664831 ataggctcgtagcacgtcaacataaatataaataatattgatgattaagagagtgacgatttgtcaattatata-acaatatatccaaaaaaaaaaaaat 39664733  T
Q  130 accctaaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    ||| ||| |||||||||||||| |||||||||||| | | || |||| ||||||||| ||||    
T  39664732 accataagtgctatactatatccaaaagaaacattgtcagtgttatactatatcaatacaaa 39664671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 1678869 - 1678936
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||||    
T  1678869 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagcacc 1678936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 19349318 - 19349384
Alignment:
Q  48 catcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataata 114  Q
    ||||||||||| ||||||| |||||||||||||| |||  || ||||||||||||||||||| ||||    
T  19349318 catcaacataaatataaattatattgacgattaagagagcgacgattagtcaattacatacacaata 19349384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 45532226 - 45532331
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaat 138  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||  || | |||||||||||||||||  |||||||  ||||||||||||| | | |    
T  45532226 ctcgtagcacattaacataaatataaataatattgacgattaagagggtggtcattagtcaattacatacgcaatatat-acaaaaagagcaccatcagt 45532324  T
Q  139 gctatac 145  Q
    |||||||    
T  45532325 gctatac 45532331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 48334318 - 48334161
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||| ||||||||||||||||| ||  | | | | ||||||  |||| || |||||||||| |||||| ||||     
T  48334318 ataggctcgtagcacatcaacataaatatatataatattgacgattaagagggtaacggtcagtcaacgacatgcacaatatatcccgaaaagaacacca 48334219  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    |   || ||||||||||| ||||  |||||| ||| || |||| |||||| |||||||    
T  48334218 tccgtgttatactatatccaaaaagaacattgttagtgctatactatatcgatccaaa 48334161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 52121718 - 52121625
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||| |||| |||||||| ||| || |||||||||||||||||||  || ||||  |||||||||||||    
T  52121718 ctcgtagcacattaacataaatataaatattatttacgattaagagagtggtgattagtcaattacatacgcaaaatatatcaaaaagagcacc 52121625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 22610440 - 22610531
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcac 131  Q
    |||||||  ||| ||||||| |||||||||||||||||||| | ||| || | |||||||||||||||||  |||||||  ||||||||||||    
T  22610440 ctcgtagcacattaacataaatataaataatattgacgattgagagagtggtcattagtcaattacatacgaaatatat-acaaaaagagcac 22610531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 1528959 - 1528892
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||||||||||| ||| || | |||||  ||||||||||| ||||||| ||||||||||||||    
T  1528959 ataatattgacgattaagagagtggtcattaggtaattacatacacaatatataccaaaaagagcacc 1528892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 28705670 - 28705590
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatac 145  Q
    ||||||||||||||||| ||| || | ||||| ||||||||||   ||||||| |||||||||||||| | |||| |||||    
T  28705670 ataatattgacgattaagagagtggtcattagacaattacatatgcaatatataccaaaaagagcaccatcaatgttatac 28705590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 6707723 - 6707880
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||| |||| ||||||||| |||||||     
T  6707723 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattaatcaattacatacacaatacatcccaaaaggagcacca 6707822  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    | |||||||||||||||| ||||  |||||| ||| || |||| |||||  |||||||    
T  6707823 tcaatgctatactatatccaaaatgaacattgttagtgttatactatattgatccaaa 6707880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 187
Target Start/End: Complemental strand, 32018531 - 32018378
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| ||||||||||||||     
T  32018531 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcacca 32018432  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatc 187  Q
    |   |||||||||||||| ||||  |||||| ||| || |||| ||||||||||    
T  32018431 tcggtgctatactatatccaaaaagaacattgttagtgttatactatatcaatc 32018378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 191
Target Start/End: Complemental strand, 11105721 - 11105565
Alignment:
Q  35 taggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccct 134  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||| ||| || | ||||| ||||||||||||||||||||||||||||||||||| |    
T  11105721 taggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggttattagccaattacatacataatatatcccaaaaagagcaccat 11105622  T
Q  135 aaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
     | || |||  |||||| ||||  |||||| ||| || |||| ||||||||||||||    
T  11105621 cagtgttattttatatccaaaatgaacattgttagtgttatactatatcaatccaaa 11105565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 10894201 - 10894359
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaa-taatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    ||||||||| ||  ||||| ||||| |||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||| ||||    
T  10894201 ataggctcgaagcacatcagcataaatataaaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcacaaaaagaacacc 10894300  T
Q  133 ctaaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
     | | |||||||||||||| ||||| |||||| ||| || |||| |||||| |||||||    
T  10894301 atcagtgctatactatatccaaaaggaacattgttagtgctatactatatcgatccaaa 10894359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 19128567 - 19128409
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcc-caaaaagagcacc 132  Q
    |||||||||||   ||||||||||| |||||||||| ||||||||||| ||| ||| ||||||||||||||||||| |||||||||  ||||| ||||||    
T  19128567 ataggctcgtaacacatcaacataaatataaataatgttgacgattaagagagtgacgattagtcaattacatacacaatatatccaaaaaaaaagcacc 19128468  T
Q  133 ctaaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
     ||| || ||||||||||| |||||||||||| ||| || |||| |||||| |||||||    
T  19128467 ataagtgttatactatatccaaaagaaacattgttagtgctatactatatcgatccaaa 19128409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 27084387 - 27084257
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||| ||||| ||| ||||| ||||||||||||||||| |||||||||||||||||||| |     
T  27084387 ataggctcgtagcacatcaacataaatataaataatattgacaattaagagagtgatggttagtcaattacatacacaatatatcccaaaaagagcatca 27084288  T
Q  134 taaatgctatactatatcaaaaagaaacatt 164  Q
    ||| || |||||||||||  |||| ||||||    
T  27084287 taagtgttatactatatccgaaaggaacatt 27084257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 13045065 - 13045221
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||||||| ||||| ||||||     
T  13045065 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagccaattacatacacaatatatcctaaaaa-agcacca 13045163  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatatcaatccaaa 191  Q
    | | ||| |||||||||| ||||| || ||  ||| || |||| ||||||||||||||    
T  13045164 tcagtgcaatactatatccaaaaggaagatcgttagtgttatactatatcaatccaaa 13045221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 13061058 - 13061149
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaa 125  Q
    ||||||| ||||  ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  13061058 ataggcttgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaa 13061149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 3213004 - 3212878
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||| |||||||||||| |     
T  3213004 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaaaaagagcatca 3212905  T
Q  134 taaatgctatactata-tcaaaaagaa 159  Q
    | | || ||||||||| ||||||||||    
T  3212904 tcagtgatatactatattcaaaaagaa 3212878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 3299472 - 3299342
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||||||||||   ||||||||| | ||||||||| ||| |||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||     
T  3299472 ataggctcgtaccacatcaacatgaatataaataacattaacgattaagagagtaatgattagtcaattacatacacaatatatcccaaaaagagcacca 3299373  T
Q  134 taaatgctatactatatcaaaaagaaacatt 164  Q
    | | ||||||| |||||| ||||| ||||||    
T  3299372 tcagtgctataatatatccaaaaggaacatt 3299342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 7255353 - 7255199
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    |||| |||||||  ||||||||| | |||||||||||||||||||||| ||| |||||||||||||||    |||| ||||||||||| |||||||||      
T  7255353 atagactcgtagcacatcaacattaatataaataatattgacgattaagagagtgatgattagtcaat----tacacaatatatcccacaaagagcacaa 7255258  T
Q  134 taaatgctatactatatcaaaaagaaaca-ttattaatggtatattatatcaatccaaa 191  Q
    | | |||||||||||||| ||||| |||| || |||||| |||| |||||| |||||||    
T  7255257 tcagtgctatactatatccaaaaggaacatttgttaatgttatactatatcgatccaaa 7255199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 7187938 - 7188047
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacccta 135  Q
    ||||||||||  ||| || |||| |||||||||||||||||||||| ||| |||| |||||| ||||||||||| ||||||| |||||||||||||| |     
T  7187938 aggctcgtagcacattaatataaatataaataatattgacgattaagagagtgatcattagttaattacatacacaatatataccaaaaagagcaccatc 7188037  T
Q  136 aatgctatac 145  Q
    | ||||||||    
T  7188038 agtgctatac 7188047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 234728 - 234645
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatat 117  Q
    |||| |||||||  ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||    
T  234728 atagactcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaactacatacacaatatat 234645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 26327730 - 26327608
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||| | ||||||||||  |||||||||| ||| ||||||||||||| ||||||| | |||||||| ||||||||||||      
T  26327730 ataggctcgtagcacatcaacattaatataaataattatgacgattaagagagtgatgattagtcagttacatagacaatatatctcaaaaagagcacaa 26327631  T
Q  134 taaatgctatactatatcaaaaa 156  Q
    | | || ||||||||||| ||||    
T  26327630 ttagtgttatactatatctaaaa 26327608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 32130222 - 32130315
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||  || |||| ||||||||||||||    
T  32130222 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacgcaaaatataccaaaaagagcacc 32130315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 13607490 - 13607557
Alignment:
Q  60 tataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaaga 127  Q
    |||||| |||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||||||    
T  13607490 tataaacaatattgatgattaagagagtgatgattagtcaattacatacacaatatatcccaaaaaga 13607557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 8357835 - 8357743
Alignment:
Q  39 ctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc 132  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| ||| || | |||||||||||||||||  |||||||  |||||||||||||    
T  8357835 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatat-acaaaaagagcacc 8357743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 191
Target Start/End: Original strand, 22988838 - 22988966
Alignment:
Q  60 tataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaa 159  Q
    ||||| ||||||||||||||||  || ||||||||||||||    ||||| |||||||||||||| || |||| | | || |||||| |||| ||||| |    
T  22988838 tataagtaatattgacgattaagcgagtgatgattagtcaaa---atacacaatatatcccaaaaggaacaccatcagtgttatactgtatccaaaagga 22988934  T
Q  160 acattattaatggtatattatatcaatccaaa 191  Q
    ||||| ||| || |||| |||||| |||||||    
T  22988935 acattgttagtgctatactatatcgatccaaa 22988966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 191
Target Start/End: Complemental strand, 23799558 - 23799430
Alignment:
Q  60 tataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaagaa 159  Q
    ||||| ||||||||||||||||  || ||||||||||||||    ||||| |||||||||||||| || |||| | | || |||||| |||| ||||| |    
T  23799558 tataagtaatattgacgattaagcgagtgatgattagtcaaa---atacacaatatatcccaaaaggaacaccatcagtgttatactgtatccaaaagga 23799462  T
Q  160 acattattaatggtatattatatcaatccaaa 191  Q
    ||||| ||| || |||| |||||| |||||||    
T  23799461 acattgttagtgctatactatatcgatccaaa 23799430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 4153245 - 4153325
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataata 114  Q
    |||||||| |||  ||||||||||| ||||||||||||| |||||||| ||| ||||||| | |||||||| |||| ||||    
T  4153245 ataggctcatagcacatcaacataaatataaataatattaacgattaagagagtgatgatcactcaattacttacacaata 4153325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 1036001 - 1036060
Alignment:
Q  65 ataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaa 124  Q
    ||||||||||||||||| ||| || | |||||||||||||||||  ||||||| ||||||    
T  1036001 ataatattgacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaa 1036060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 182
Target Start/End: Original strand, 202466 - 202607
Alignment:
Q  34 ataggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccc 133  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||||       |||||||||||||||||| | | ||||||||||||||| || |     
T  202466 ataggctcgtagcacatcaacataaatataaataatattgacgattaaa-------tgattagtcaattacatatacagtatatcccaaaaagaacatca 202558  T
Q  134 taaatgctatactatatcaaaaagaaacattattaatggtatattatat 182  Q
    |||||| |||  |||||| |||||||| ||| ||| || ||||||||||    
T  202559 taaatgttatgttatatccaaaagaaatattgttagtgctatattatat 202607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 43765 - 43874
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacccta 135  Q
    ||||||||||  ||| || |||| |||||||||||||||||||||| ||| || | |||||||||||||||||  |||||||  ||||||||||||| |     
T  43765 aggctcgtagcacattaatataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgcaatatatatcaaaaagagcaccatc 43864  T
Q  136 aatgctatac 145  Q
    | ||||||||    
T  43865 agtgctatac 43874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 187
Target Start/End: Complemental strand, 6070 - 5926
Alignment:
Q  52 aacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcacc-----------ctaaatgc 140  Q
    ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||| || |||  ||||||||||||||            | |||||    
T  6070 aacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaaaata--ccaaaaagagcaccatcggtgttatatcaatgc 5973  T
Q  141 tatactatatcaaaaagaaacattattaatggtatattatatcaatc 187  Q
    ||||||||||||||||| |||||| |||||| |||| ||||||||||    
T  5972 tatactatatcaaaaaggaacattgttaatgttatactatatcaatc 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 29804 - 29898
Alignment:
Q  36 aggctcgtagaccatcaacataagtataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagca 130  Q
    ||||||||||  ||| ||||||| ||||||||||||| |||||||| ||| || | |||||||||||||||||  ||||||| ||||||||||||    
T  29804 aggctcgtagcacattaacataaatataaataatattaacgattaagagagtggtcattagtcaattacatacgcaatatataccaaaaagagca 29898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 13786 - 13690
Alignment:
Q  60 tataaataatattgacgattaaaagaatgatgattagtcaattacatacataatatatcccaaaaagagcaccctaaatgctatactatatcaaaaa 156  Q
    ||||||||||  |||||||||| ||| ||||||||||||||| ||||||| |||||||  ||||||||||||  | | || ||||||||||| ||||    
T  13786 tataaataattatgacgattaagagagtgatgattagtcaatgacatacacaatatatatcaaaaagagcacaattagtgttatactatatctaaaa 13690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 41276 - 41331
Alignment:
Q  54 cataagtataaataatattgacgattaaaagaatgatgattagtcaattacataca 109  Q
    ||||| ||||||||||||| |||||||| ||| || | ||||||||||||||||||    
T  41276 cataaatataaataatattaacgattaagagagtggtcattagtcaattacataca 41331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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