View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14943_low_24 (Length: 247)
Name: NF14943_low_24
Description: NF14943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14943_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 9 - 229
Target Start/End: Original strand, 8655610 - 8655830
Alignment:
| Q |
9 |
ataatactaaaatttgaagttcccattttgaccaaatttattttgttcttgaagatccgcatgcaaataacattggcgagtgtgtgaaattgaagataag |
108 |
Q |
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| T |
8655610 |
ataatactaaaattagaagttcccattttgacgaaatttattttgttcttgaagatccgcatgcaaataacattggcgagtgtgtgaaattgaagataag |
8655709 |
T |
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| Q |
109 |
acgaagaagaaaaatgcacttgagcgagaatgaaggaattgaggggaagagcttcgtagtgaccggtggacttggattcgtaggatctgctctctgcttg |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8655710 |
acgaagaagaaaaatgcacttgagcgagaatgaaggaattgaggggaagagcttcgtagtgaccggtggacttggattcgtaggatctgctctctgcttg |
8655809 |
T |
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| Q |
209 |
gaactcattagaagaggtgct |
229 |
Q |
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| T |
8655810 |
gaactcattagaagaggtgct |
8655830 |
T |
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